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Genetic evidence from Indian red jungle fowl corroborates multiple domestication of modern day chicken

Kanginakudru, Sriramana, Metta, Muralidhar, Jakati, RD, Nagaraju, J·2008·BMC Evolutionary Biology
DOI 10.1186/1471-2148-8-174PMC PMC2474866
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Abstract

Background: Domestication of chicken is believed to have occurred in Southeast Asia, especially in Indus valley. However, non-inclusion of Indian red jungle fowl (RJF), Gallus gallus murghi in previous studies has left a big gap in understanding the relationship of this major group of birds. In the present study, we addressed this issue by analyzing 76 Indian birds that included 56 G. g. murghi (RJF), 16 G. g. domesticus (domestic chicken) and 4 G. sonneratii (Grey JF) using both microsatellite markers and mitochondrial D-loop sequences. We also compared the D-loop sequences of Indian birds with those of 779 birds obtained from GenBank. Results: Microsatellite marker analyses of Indian birds indicated an average F ST of 0.126 within G. g. murghi, and 0.154 within G. g. domesticus while it was more than 0.2 between the two groups. The microsatellite-based phylogenetic trees showed a clear separation of G. g. domesticus from G. g. murghi, and G. sonneratii. Mitochondrial DNA based mismatch distribution analyses showed a lower Harpending's raggedness index in both G. g. murghi (0.001515) and in Indian G. g. domesticus (0.0149) birds indicating population expansion. When meta analysis of global populations of 855 birds was carried out using median joining haplotype network, 43 Indian birds of G. g. domesticus (19 haplotypes) were distributed throughout the network sharing haplotypes with the RJFs of different origins. Conclusion: Our results suggest that the domestication of chicken has occurred independently in different locations of Asia including India. We found evidence for domestication of Indian birds from G. g. spadiceus and G. g. gallus as well as from G. g. murghi, corroborating multiple domestication of Indian and other domestic chicken. In contrast to the commonly held view that RJF and domestic birds hybridize in nature, the present study shows that G. g. murghi is relatively pure. Further, the study also suggested that the chicken populations have undergone population expansion, especially in the Indus valley.

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  • Chickens were probably brought into domestication more than once, as suggested by genetic data.

    “Across this area, chickens were probably brought into domestication more than once, as suggested by genetic data, although good zooarchaeological data remains scarce (see Fuller 2007: 400-401; Kanginakudru et al. 2008;Berthouly-Salazar et al. 2010).”

    From Across the Indian Ocean: the prehistoric movement of plants and animals (2011) · cites this paper as Kanginakudru et al. 2008

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Metadata

Authors
Kanginakudru, S., Metta, M., Jakati, R., & Nagaraju, J.
Venue
BMC Evolutionary Biology
Publisher
Springer Science and Business Media LLC
Published
2008-06-10
Volume
8
Issue
1
ISSN
1471-2148
DOI
10.1186/1471-2148-8-174
PMC
PMC2474866
Cited by
125
References
2
Language
en

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