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Confocal Laser Scanning Microscopy for Analysis of Pseudomonas aeruginosa Biofilm Architecture and Matrix Localization

Reichhardt, Courtney, Parsek, Matthew R.·2019·Frontiers in Microbiology

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Research works printed but not linked: 56

  1. Absalon, 2011, A communal bacterial adhesin anchors biofilm and bystander cells to surfaces, PLoS Pathog., 7, e1002210, 10.1371/journal.ppat.1002210 · DOI
  2. Allesen-Holm, 2006, A characterization of DNA release in Pseudomonas aeruginosa cultures and biofilms, Mol. Microbiol., 59, 1114, 10.1111/j.1365-2958.2005.05008.x · DOI · Paper page
  3. Azeredo, 2017, Critical review on biofilm methods, Crit. Rev. Microbiol., 43, 313, 10.1080/1040841X.2016.1208146 · DOI · Paper page
  4. Berk, 2012, Molecular architecture and assembly principles of Vibrio cholerae biofilms, Science, 337, 236, 10.1126/science.1222981 · DOI · Paper page
  5. Borlee, 2010, Pseudomonas aeruginosa uses a cyclic-di-GMP-regulated adhesin to reinforce the biofilm extracellular matrix, Mol. Microbiol., 75, 827, 10.1111/j.1365-2958.2009.06991.x · DOI · Paper page
  6. Byrd, 2009, Genetic and biochemical analyses of the Pseudomonas aeruginosa Psl exopolysaccharide reveal overlapping roles for polysaccharide synthesis enzymes in Psl and LPS production, Mol. Microbiol., 73, 622, 10.1111/j.1365-2958.2009.06795.x · DOI · Paper page
  7. Colvin, 2012, The Pel and Psl polysaccharides provide Pseudomonas aeruginosa structural redundancy within the biofilm matrix: polysaccharides of the P. aeruginosa biofilm matrix, Environ. Microbiol., 14, 1913, 10.1111/j.1462-2920.2011.02657.x · DOI · Paper page
  8. Cooley, 2016, Cyclic Di-GMP-regulated periplasmic proteolysis of a Pseudomonas aeruginosa Type Vb secretion system substrate, J. Bacteriol., 198, 66, 10.1128/JB.00369-15 · doi:10.1128/jb.00369-15
  9. Costerton, 1995, Microbial biofilms, Annu. Rev. Microbiol., 49, 711, 10.1146/annurev.mi.49.100195.003431 · DOI · Paper page
  10. Costerton, 1999, Bacterial biofilms: a common cause of persistent infections, Science, 284, 1318, 10.1126/science.284.5418.1318 · DOI · Paper page
  11. Dragoš, 2017, The peculiar functions of the bacterial extracellular matrix, Trends Microbiol., 25, 257, 10.1016/j.tim.2016.12.010 · DOI · Paper page
  12. Flemming, 2010, The biofilm matrix, Nat. Rev. Microbiol., 8, 623, 10.1038/nrmicro2415 · DOI · Paper page
  13. Fong, 2010, Role of Vibrio polysaccharide (vps) genes in VPS production, biofilm formation and Vibrio cholerae pathogenesis, Microbiology, 156, 2757, 10.1099/mic.0.040196-0 · DOI · Paper page
  14. Gordon, 1988, Antibiotic interaction and diffusion through alginate and exopolysaccharide of cystic fibrosis-derived Pseudomonas aeruginosa, J. Antimicrob. Chemother., 22, 667, 10.1093/jac/22.5.667 · DOI · Paper page
  15. Hall-Stoodley, 2004, Bacterial biofilms: from the natural environment to infectious diseases, Nat. Rev. Microbiol., 2, 95, 10.1038/nrmicro821 · DOI · Paper page
  16. Harmsen, 2010, Role of extracellular DNA during biofilm formation by Listeria monocytogenes, Appl. Environ. Microbiol., 76, 2271, 10.1128/AEM.02361-09 · DOI · Paper page
  17. Heydorn, Experimental reproducibility in flow-chamber biofilms, Microbiology, 146, 2409, 10.1099/00221287-146-10-2409 · DOI · Paper page
  18. Heydorn, Quantification of biofilm structures by the novel computer program COMSTAT, Microbiology, 146, 2395, 10.1099/00221287-146-10-2395 · DOI · Paper page
  19. Hollenbeck, 2016, Mechanical behavior of a Bacillus subtilis pellicle, J. Phys. Chem. B, 120, 6080, 10.1021/acs.jpcb.6b02074 · DOI
  20. Hollenbeck, 2014, Molecular determinants of mechanical properties of V. cholerae biofilms at the air-liquid interface, Biophys. J., 107, 2245, 10.1016/j.bpj.2014.10.015 · DOI
  21. Hung, 2013, Escherichia coli biofilms have an organized and complex extracellular matrix structure, mBio, 4, e00645, 10.1128/mBio.00645-13 · DOI · Paper page
  22. Irie, 2012, Self-produced exopolysaccharide is a signal that stimulates biofilm formation in Pseudomonas aeruginosa, Proc. Natl. Acad. Sci., 109, 20632, 10.1073/pnas.1217993109 · DOI · Paper page
  23. Jennings, 2015, Pel is a cationic exopolysaccharide that cross-links extracellular DNA in the Pseudomonas aeruginosa biofilm matrix, Proc. Natl. Acad. Sci., 112, 11353, 10.1073/pnas.1503058112 · DOI · Paper page
  24. Joubert, 2017, Visualization of Aspergillus fumigatus biofilms with scanning electron microscopy and variable pressure-scanning electron microscopy: a comparison of processing techniques, J. Microbiol. Methods, 132, 46, 10.1016/j.mimet.2016.11.002 · DOI
  25. Keren-Paz, 2018, Micro-CT X-ray imaging exposes structured diffusion barriers within biofilms, NPJ Biofilms Microbiomes, 4, 8, 10.1038/s41522-018-0051-8 · DOI
  26. Kindrachuk, 2011, Involvement of an ATP-dependent protease, PA0779/AsrA, in inducing heat shock in response to tobramycin in Pseudomonas aeruginosa, Antimicrob. Agents Chemother., 55, 1874, 10.1128/AAC.00935-10 · DOI
  27. Kocharova, 1988, Structure of an extracellular cross-reactive polysaccharide from Pseudomonas aeruginosa immunotype 4, J. Biol. Chem., 263, 11291, 10.1016/S0021-9258(18)37956-0 · doi:10.1016/s0021-9258(18)37956-0
  28. Li, 2015, Spatial patterns of carbonate biomineralization in biofilms, Appl. Environ. Microbiol., 81, 7403, 10.1128/AEM.01585-15 · DOI
  29. Li, 2016, In situ biomineralization and particle deposition distinctively mediate biofilm susceptibility to chlorine, Appl. Environ. Microbiol., 82, 2886, 10.1128/AEM.03954-15 · doi:10.1128/aem.03954-15
  30. Ma, 2009, Assembly and development of the Pseudomonas aeruginosa biofilm matrix, PLoS Pathog., 5, e1000354, 10.1371/journal.ppat.1000354 · DOI · Paper page
  31. Ma, 2006, Analysis of Pseudomonas aeruginosa conditional Psl variants reveals roles for the Psl polysaccharide in adhesion and maintaining biofilm structure postattachment, J. Bacteriol., 188, 8213, 10.1128/JB.01202-06 · DOI · Paper page
  32. Ma, 2007, Pseudomonas aeruginosa Psl is a galactose- and mannose-rich exopolysaccharide, J. Bacteriol., 189, 8353, 10.1128/JB.00620-07 · DOI · Paper page
  33. Mann, 2012, Pseudomonas biofilm matrix composition and niche biology, FEMS Microbiol. Rev., 36, 893, 10.1111/j.1574-6976.2011.00322.x · DOI · Paper page
  34. Martin, 1993, Mechanism of conversion to mucoidy in Pseudomonas aeruginosa infecting cystic fibrosis patients, Proc. Natl. Acad. Sci. USA, 90, 8377, 10.1073/pnas.90.18.8377 · DOI · Paper page
  35. Metcalf, 2013, Biofilm delays wound healing: a review of the evidence, Burns Trauma, 1, 5, 10.4103/2321-3868.113329 · DOI · Paper page
  36. Moradali, 2017, Pseudomonas aeruginosa lifestyle: a paradigm for adaptation, survival, and persistence, Front. Cell. Infect. Microbiol., 7, 39, 10.3389/fcimb.2017.00039 · DOI · Paper page
  37. Moscoso, 2006, Biofilm formation by Streptococcus pneumoniae: role of choline, extracellular DNA, and capsular polysaccharide in microbial accretion, J. Bacteriol., 188, 7785, 10.1128/JB.00673-06 · DOI · Paper page
  38. Mulcahy, 2014, Pseudomonas aeruginosa biofilms in disease, Microb. Ecol., 68, 1, 10.1007/s00248-013-0297-x · DOI · Paper page
  39. O’Toole, 1999, Genetic approaches to study of biofilms, 91
  40. Parsek, 2003, Bacterial biofilms: an emerging link to disease pathogenesis, Annu. Rev. Microbiol., 57, 677, 10.1146/annurev.micro.57.030502.090720 · DOI · Paper page
  41. Reichhardt, 2014, Solid-state NMR for bacterial biofilms, Mol. Phys., 112, 887, 10.1080/00268976.2013.837983 · DOI
  42. Reichhardt, 2018, CdrA interactions within the Pseudomonas aeruginosa biofilm matrix safeguard it from proteolysis and promote cellular packing, 12
  43. Rice, 2007, The cidA murein hydrolase regulator contributes to DNA release and biofilm development in Staphylococcus aureus, Proc. Natl. Acad. Sci. USA, 104, 8113, 10.1073/pnas.0610226104 · DOI · Paper page
  44. Rybtke, 2015, The LapG protein plays a role in Pseudomonas aeruginosa biofilm formation by controlling the presence of the CdrA adhesin on the cell surface, MicrobiologyOpen, 4, 917, 10.1002/mbo3.301 · DOI
  45. Sauer, 2003, The genomics and proteomics of biofilm formation, Genome Biol., 4, 219, 10.1186/gb-2003-4-6-219 · DOI
  46. Schürks, 2002, Monomer composition and sequence of alginates from Pseudomonas aeruginosa, Int. J. Biol. Macromol., 30, 105, 10.1016/S0141-8130(02)00002-8 · DOI
  47. Serra, 2013, Microanatomy at cellular resolution and spatial order of physiological differentiation in a bacterial biofilm, mBio, 4, e00103, 10.1128/mBio.00103-13 · DOI · Paper page
  48. Sønderholm, 2017, Pseudomonas aeruginosa aggregate formation in an alginate bead model system exhibits in vivo-like characteristics, Appl. Environ. Microbiol., 83, e00113, 10.1128/AEM.00113-17 · DOI
  49. Starkey, 2009, Pseudomonas aeruginosa rugose small colony variants have adaptations likely to promote persistence in the cystic fibrosis lung, J. Bacteriol., 191, 3492, 10.1128/JB.00119-09 · DOI · Paper page
  50. Steinberg, 2015, The matrix reloaded: how sensing the extracellular matrix synchronizes bacterial communities, J. Bacteriol., 197, 2092, 10.1128/JB.02516-14 · DOI
  51. Stewart, 2001, Antibiotic resistance of bacteria in biofilms, Lancet, 358, 135, 10.1016/S0140-6736(01)05321-1 · DOI · Paper page
  52. Swerhone, 2001, Assessment of lectin-binding analysis for in situ detection of glycoconjugates in biofilm systems, Microbiology, 147, 299, 10.1099/00221287-147-2-299 · DOI · Paper page
  53. Toyofuku, 2012, Identification of proteins associated with the Pseudomonas aeruginosa biofilm extracellular matrix, J. Proteome Res., 11, 4906, 10.1021/pr300395j · DOI · Paper page
  54. Tseng, 2018, A biofilm matrix-associated protease inhibitor protects Pseudomonas aeruginosa from proteolytic attack, mBio, 9, 10.1128/mBio.00543-18 · DOI
  55. Tseng, 2013, The extracellular matrix protects Pseudomonas aeruginosa biofilms by limiting the penetration of tobramycin, Environ. Microbiol., 15, 2865, 10.1111/1462-2920.12155 · DOI · Paper page
  56. Webb, 2003, Cell death in Pseudomonas aeruginosa biofilm development, J. Bacteriol., 185, 4585, 10.1128/JB.185.15.4585-4592.2003 · DOI · Paper page

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Metadata

Authors
Reichhardt, C., & Parsek, M. R.
Venue
Frontiers in Microbiology
Published
2019-04-02
Volume
10
ISSN
1664-302X
Cited by
145
References
6

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Reichhardt, C., & Parsek, M. R. (2019). Confocal Laser Scanning Microscopy for Analysis of Pseudomonas aeruginosa Biofilm Architecture and Matrix Localization. Frontiers in Microbiology. https://doi.org/10.3389/fmicb.2019.00677

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