Check biochemistry, genetics and molecular biology papers: citations, claims and retractions

An obesity-associated gut microbiome with increased capacity for energy harvest

Turnbaugh, P. J., Ley, R. E., Mahowald, M. A., Magrini, V., Mardis, E. R., & Gordon, J. I. (2006) · Nature

Gut microbiota and healthAdipokines, Inflammation, and Metabolic Diseases

Cited by 12,444

Bacterial Biofilms: A Common Cause of Persistent Infections

Costerton, J. W., Stewart, P. S., & Greenberg, E. P. (1999) · Science

Bacterial biofilms and quorum sensingEscherichia coli research studies

Cited by 12,167

Comprehensive molecular portraits of human breast tumours

The Cancer Genome Atlas Network (2012) · Nature

Breast Cancer Treatment StudiesCancer Genomics and Diagnostics

Cited by 12,129

Fast and accurate long-read alignment with Burrows-Wheeler transform.

Li, H., & Durbin, R. (2010) · Bioinformatics

Genomics and Phylogenetic StudiesAlgorithms and Data Compression

Cited by 12,063

Stages of embryonic development of the zebrafish

Kimmel, C. B., Ballard, W. W., Kimmel, S. R., Ullmann, B., & Schilling, T. F. (1995) · Developmental Dynamics

Zebrafish Biomedical Research ApplicationsDevelopmental Biology and Gene Regulation

Cited by 12,037

Conserved Seed Pairing, Often Flanked by Adenosines, Indicates that Thousands of Human Genes are MicroRNA Targets

Lewis, B. P., Burge, C. B., & Bartel, D. P. (2005) · Cell

MicroRNA in disease regulationPlant Molecular Biology Research

Cited by 11,855

Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments

Smyth, G. K. (2004) · Statistical Applications in Genetics and Molecular Biology

Gene expression and cancer classificationBioinformatics and Genomic Networks

Cited by 11,829

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w 1118 ; iso-2; iso-3

Cingolani, P., Platts, A., Wang, L. L., Coon, M., Nguyen, T., Wang, L., Land, S. J., Lu, X., & Ruden, D. M. (2012) · Fly

Genomics and Phylogenetic StudiesGenomics and Rare Diseases

Cited by 11,816

Median-joining networks for inferring intraspecific phylogenies

Bandelt, H. J., Forster, P., & Rohl, A. (1999) · Molecular Biology and Evolution

Genomics and Phylogenetic StudiesGenetic diversity and population structure

Cited by 11,742

Structure, function and diversity of the healthy human microbiome

The Human Microbiome Project Consortium (2012) · Nature

Gut microbiota and healthMicrobial Community Ecology and Physiology

Cited by 11,726

A human gut microbial gene catalogue established by metagenomic sequencing

MetaHIT Consortium, Qin, J., Li, R., Raes, J., Arumugam, M., Burgdorf, K. S., Manichanh, C., Nielsen, T., Pons, N., Levenez, F., et al. (2010) · Nature

Gut microbiota and healthGenomics and Phylogenetic Studies

Cited by 11,624

Molecular classification of cancer: class discovery and class prediction by gene expression monitoring

Golub, T. R., Slonim, D. K., Tamayo, P., Huard, C., Gaasenbeek, M., Mesirov, J. P., Coller, H., Loh, M. L., Downing, J. R., Caligiuri, M. A., et al. (1999) · Science

Gene expression and cancer classificationBreast Cancer Treatment Studies

Cited by 11,516

Improved tools for biological sequence comparison.

Pearson, W. R., & Lipman, D. J. (1988) · Proceedings of the National Academy of Sciences

Genomics and Phylogenetic StudiesFractal and DNA sequence analysis

Cited by 11,227

Cd-hit: Accelerated for clustering the next-generation sequencing data

Fu, L., Niu, B., Zhu, Z., Wu, S., & Li, W. (2012) · Bioinformatics

Genomics and Phylogenetic StudiesParallel Computing and Optimization Techniques

Cited by 11,175

QUAST: quality assessment tool for genome assemblies

Gurevich, A., Saveliev, V., Vyahhi, N., & Tesler, G. (2013) · Bioinformatics

Genomics and Phylogenetic StudiesFractal and DNA sequence analysis

Cited by 11,172

Posterior summarization in Bayesian phylogenetics using tracer 1.7

Rambaut, A., Drummond, A. J., Xie, D., Baele, G., & Suchard, M. A. (2018) · Systematic Biology

Genomics and Phylogenetic StudiesMarkov Chains and Monte Carlo Methods

Cited by 11,159

Genome engineering using the CRISPR-Cas9 system

Ran, F. A., Hsu, P. D., Wright, J., Agarwala, V., Scott, D. A., & Zhang, F. (2013) · Nature Protocols

CRISPR and Genetic EngineeringRNA regulation and disease

Cited by 11,133

Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the International Society for Extracellular Vesicles and update of the MISEV2014 guidelines

Théry, C., Witwer, K. W., Aikawa, E., Alcaraz, M. J., Anderson, J. D., Andriantsitohaina, R., Antoniou, A., Arab, T., Archer, F., Atkin‐Smith, G. K., et al. (2018) · Journal of Extracellular Vesicles

Extracellular vesicles in diseaseCellular transport and secretion

Cited by 11,099

Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB

DeSantis, T. Z., Hugenholtz, P., Larsen, N., Rojas, M., Brodie, E. L., Keller, K., Huber, T., Dalevi, D., Hu, P., & Andersen, G. L. (2006) · Applied and Environmental Microbiology

Genomics and Phylogenetic StudiesMicrobial Community Ecology and Physiology

Cited by 10,891

Chromatin modifications and their function

Kouzarides, T. (2007) · Cell

Genomics and Chromatin DynamicsEpigenetics and DNA Methylation

Cited by 10,883

UFBoot2: Improving the Ultrafast Bootstrap Approximation

Hoang, D. T., Chernomor, O., von Haeseler, A., Minh, B. Q., & Vinh, L. S. (2018) · Molecular Biology and Evolution

Genomics and Phylogenetic StudiesRNA and protein synthesis mechanisms

Cited by 10,881

Hydrogen Peroxide is Scavenged by Ascorbate-specific Peroxidase in Spinach Chloroplasts

Nakano, Y., & Asada, K. (1981) · Plant and Cell Physiology

Photosynthetic Processes and MechanismsRedox biology and oxidative stress

Cited by 10,809

Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

Kuleshov, M. V., Jones, M. R., Rouillard, A. D., Fernandez, N. F., Duan, Q., Wang, Z., Koplev, S., Jenkins, S. L., Jagodnik, K. M., Lachmann, A., et al. (2016) · Nucleic Acids Research

Bioinformatics and Genomic NetworksGenomics and Phylogenetic Studies

Cited by 10,799

The biology , function , and biomedical applications of exosomes

Kalluri, R., & LeBleu, V. S. (2020) · Science

Extracellular vesicles in diseaseCellular transport and secretion

Cited by 10,770