REST and Its Corepressors Mediate Plasticity of Neuronal Gene Chromatin throughout Neurogenesis
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
REST expression is highest in pluripotent stem cells and decreases upon restriction to neural progenitor cells and subsequently to neurons.
“REST expression is highest in pluripotent stem cells and decreases upon restriction to neural progenitor cells and subsequently to neurons (Ballas et al., 2005).”
From The Bifunctional microRNA miR-9/miR-9* Regulates REST and CoREST and Is Downregulated in Huntington's Disease (2008) · cites this paper as Ballas et al., 2005
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
DNA Methylation-Related Chromatin Remodeling in Activity-Dependent <i>Bdnf</i> Gene Regulation
Martinowich, K., Hattori, D., Wu, H., Fouse, S., He, F., Hu, Y., Fan, G., & Sun, Y. E. (2003) · Science · doi:10.1126/science.1090842 · Cited by 1,405 · see citing works
Deficiency of methyl-CpG binding protein-2 in CNS neurons results in a Rett-like phenotype in mice
Chen, R. Z., Akbarian, S., Tudor, M., & Jaenisch, R. (2001) · Nature Genetics · doi:10.1038/85906 · Cited by 1,275 · see citing works
Flagged first, then by citations
Research works printed but not linked: 15
- [1]1. Anderson, D.J. ∙ Jan, Y.N. The determination of the neuronal phenotype Cowan, W.M. ∙ Jessell, T.M. ∙ Zipursky, S.L. (Editors) Molecular and Cellular Approaches to Neuronal Development Oxford University Press, New York, 1997; 26-63 Google Scholar
- [2]2. Andres, M.E. ∙ Burger, C. ∙ Peral-Rubio, M.J. ... CoREST: a functional corepressor required for regulation of neural-specific gene expression Proc. Natl. Acad. Sci. USA. 1999; 96:9873-9878 Crossref Scopus (392) PubMed Google Scholar
- [3]3. Arnold, D.B. ∙ Heintz, N. A calcium responsive element that regulates expression of two calcium binding proteins in Purkinje cells Proc. Natl. Acad. Sci. USA. 1997; 94:8842-8847 Crossref Scopus (71) PubMed Google Scholar
- [4]4. Ashe, H.L. ∙ Monks, J. ∙ Wijgerde, M. ... Intergenic transcription and transinduction of the human beta-globin locus Genes Dev. 1997; 11:2494-2509 Crossref Scopus (303) PubMed Google Scholar
- [5]5. Bain, G. ∙ Kitchens, D. ∙ Yao, M. ... Embryonic stem cells express neuronal properties in vitro Dev. Biol. 1995; 168:342-357 Crossref Scopus (1024) PubMed Google Scholar
- [6]6. Ballas, N. ∙ Battaglioli, E. ∙ Atouf, F. ... Regulation of neuronal traits by a novel transcriptional complex Neuron. 2001; 31:353-365 Full Text Full Text (PDF) Scopus (363) PubMed Google Scholar
- [7]7. Bannister, A.J. ∙ Schneider, R. ∙ Kouzarides, T. Histone methylation: dynamic or static? Cell. 2002; 109:801-806 Full Text Full Text (PDF) Scopus (441) PubMed Google Scholar
- [8]8. Battaglioli, E. ∙ Andres, M.E. ∙ Rose, D.W. ... REST repression of neuronal genes requires components of the hSWI.SNF complex J. Biol. Chem. 2002; 277:41038-41045 Crossref Scopus (162) PubMed Google Scholar
- [9]9. Bird, A. DNA methylation patterns and epigenetic memory Genes Dev. 2002; 16:6-21 Crossref Scopus (5730) PubMed Google Scholar
- [10]10. Bruce, A.W. ∙ Donaldson, I.J. ∙ Wood, I.C. ... Genome-wide analysis of repressor element 1 silencing transcription factor/neuron-restrictive silencing factor (REST/NRSF) target genes Proc. Natl. Acad. Sci. USA. 2004; 101:10458-10463 Crossref Scopus (398) PubMed Google Scholar
- [11]11. Capela, A. ∙ Temple, S. LeX/ssea-1 is expressed by adult mouse CNS stem cells, identifying them as nonependymal Neuron. 2002; 35:865-875 Full Text Full Text (PDF) Scopus (606) PubMed Google Scholar
- [12]12. Casarosa, S. ∙ Fode, C. ∙ Guillemot, F. Mash1 regulates neurogenesis in the ventral telencephalon Development. 1999; 126:525-534 Crossref PubMed Google Scholar
- [13]13. Chen, Z.F. ∙ Paquette, A.J. ∙ Anderson, D.J. NRSF/REST is required in vivo for repression of multiple neuronal target genes during embryogenesis Nat. Genet. 1998; 20:136-142 Crossref Scopus (410) PubMed Google Scholar
- [15]15. Chen, W.G. ∙ Chang, Q. ∙ Lin, Y. ... Derepression of BDNF transcription involves calcium-dependent phosphorylation of MeCP2 Science. 2003; 302:885-889 Crossref Scopus (1055) PubMed Google Scholar
- [16]16. Chong, J.A. ∙ Tapia-Ramirez, J. ∙ Kim, S. ... REST: a mammalian silencer protein that restricts sodium channel gene expression to neurons Cell. 1995; 80:949-957
Cited by
Sorted by citations
Genome-Wide Mapping of in Vivo Protein-DNA Interactions
Johnson, D. S., Mortazavi, A., Myers, R. M., & Wold, B. (2007) · Science · doi:10.1126/science.1141319 · Cited by 2,927 · see citing works
HDAC2 negatively regulates memory formation and synaptic plasticity
Guan, J.-S., Haggarty, S. J., Giacometti, E., Dannenberg, J.-H., Joseph, N., Gao, J., Nieland, T. J. F., Zhou, Y., Wang, X., Mazitschek, R., et al. (2009) · Nature · doi:10.1038/nature07925 · Cited by 1,644 · see citing works
Zhou, Z., Hong, E. J., Cohen, S., Zhao, W.-N., Ho, H.-Y. H., Schmidt, L., Chen, W. G., Lin, Y., Savner, E., Griffith, E. C., et al. (2006) · Neuron · doi:10.1016/j.neuron.2006.09.037 · Cited by 877 · see citing works
The role of adult hippocampal neurogenesis in brain health and disease
Toda, T., Parylak, S. L., Linker, S. B., & Gage, F. H. (2019) · Molecular Psychiatry · doi:10.1038/s41380-018-0036-2 · Cited by 719 · see citing works
Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data
Valouev, A., Johnson, D. S., Sundquist, A., Medina, C., Anton, E., Batzoglou, S., Myers, R. M., & Sidow, A. (2008) · Nature Methods · doi:10.1038/nmeth.1246 · Cited by 695 · see citing works
Packer, A. N., Xing, Y., Harper, S. Q., Jones, L., & Davidson, B. L. (2008) · The Journal of Neuroscience · doi:10.1523/jneurosci.2390-08.2008 · Cited by 679 · see citing works
Boutz, P. L., Stoilov, P., Li, Q., Lin, C.-H., Chawla, G., Ostrow, K., Shiue, L., Ares, M., & Black, D. L. (2007) · Genes & Development · doi:10.1101/gad.1558107 · Cited by 577 · see citing works
Mechanisms of epileptogenesis: a convergence on neural circuit dysfunction
Goldberg, E. M., & Coulter, D. A. (2013) · Nature Reviews Neuroscience · doi:10.1038/nrn3482 · Cited by 542 · see citing works
Direct Conversion of Fibroblasts to Neurons by Reprogramming PTB-Regulated MicroRNA Circuits
Xue, Y., Ouyang, K., Huang, J., Zhou, Y., Ouyang, H., Li, H., Wang, G., Wu, Q., Wei, C., Bi, Y., et al. (2013) · Cell · doi:10.1016/j.cell.2012.11.045 · Cited by 562 · see citing works
Methyl-cpG-binding domain proteins: readers of the epigenome
Du, Q., Luu, P.-L., Stirzaker, C., & Clark, S. J. (2015) · Epigenomics · doi:10.2217/epi.15.39 · Cited by 544 · see citing works
Neurogenesis in the embryonic and adult brain: same regulators, different roles
Urbán, N., & Guillemot, F. (2014) · Frontiers in Cellular Neuroscience · doi:10.3389/fncel.2014.00396 · Cited by 493 · see citing works
Dempster, E. L., Pidsley, R., Schalkwyk, L. C., Owens, S., Georgiades, A., Kane, F., Kalidindi, S., Picchioni, M., Kravariti, E., Toulopoulou, T., et al. (2011) · Human Molecular Genetics · doi:10.1093/hmg/ddr416 · Cited by 460 · see citing works
Cellular plasticity and the neuroendocrine phenotype in prostate cancer
Davies, A. H., Beltran, H., & Zoubeidi, A. (2018) · Nature Reviews Urology · doi:10.1038/nrurol.2018.22 · Cited by 431 · see citing works
The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis
de la Torre-Ubieta, L., Stein, J. L., Won, H., Opland, C. K., Liang, D., Lu, D., & Geschwind, D. H. (2018) · Cell · doi:10.1016/j.cell.2017.12.014 · Cited by 353 · see citing works
Self-citationEpigenetic regulation of gene expression in physiological and pathological brain processes
Gräff, J., Kim, D., Dobbin, M. M., & Tsai, L.-H. (2011) · Physiological Reviews · doi:10.1152/physrev.00012.2010 · Cited by 373 · see citing works
CHD8 haploinsufficiency results in autistic-like phenotypes in mice
Katayama, Y., Nishiyama, M., Shoji, H., Ohkawa, Y., Kawamura, A., Sato, T., Suyama, M., Takumi, T., Miyakawa, T., & Nakayama, K. I. (2016) · Nature · doi:10.1038/nature19357 · Cited by 353 · see citing works
The neurogenetics of alternative splicing
Vuong, C. K., Black, D. L., & Zheng, S. (2016) · Nature Reviews Neuroscience · doi:10.1038/nrn.2016.27 · Cited by 340 · see citing works
MNB/DYRK1A as a multiple regulator of neuronal development
Tejedor, F. J., & Hämmerle, B. (2011) · The FEBS Journal · doi:10.1111/j.1742-4658.2010.07954.x · Cited by 214 · see citing works
Brett, J. O., Renault, V. M., Rafalski, V. A., Webb, A. E., & Brunet, A. (2011) · Aging · doi:10.18632/aging.100285 · Cited by 207 · see citing works
Chromatin Regulation by BAF170 Controls Cerebral Cortical Size and Thickness
Tuoc, T. C., Boretius, S., Sansom, S. N., Pitulescu, M.-E., Frahm, J., Livesey, F. J., & Stoykova, A. (2013) · Developmental Cell · doi:10.1016/j.devcel.2013.04.005 · Cited by 177 · see citing works
Yang, Y. J., Baltus, A. E., Mathew, R. S., Murphy, E. A., Evrony, G. D., Gonzalez, D. M., Wang, E. P., Marshall-Walker, C. A., Barry, B. J., Murn, J., et al. (2012) · Cell · doi:10.1016/j.cell.2012.10.043 · Cited by 176 · see citing works
Protein neddylation and its role in health and diseases
Zhang, S., Yu, Q., Li, Z., Zhao, Y., & Sun, Y. (2024) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-024-01800-9 · Cited by 171 · see citing works
Hibaoui, Y., Grad, I., Letourneau, A., Sailani, M. R., Dahoun, S., Santoni, F. A., Gimelli, S., Guipponi, M., Pelte, M. F., Béna, F., et al. (2014) · EMBO Molecular Medicine · doi:10.1002/emmm.201302848 · Cited by 170 · see citing works
Mehedint, M. G., Niculescu, M. D., Craciunescu, C. N., & Zeisel, S. H. (2010) · The FASEB Journal · doi:10.1096/fj.09-140145 · Cited by 167 · see citing works
Genomic Perspectives of Transcriptional Regulation in Forebrain Development
Nord, A. S., Pattabiraman, K., Visel, A., & Rubenstein, J. L. R. (2015) · Neuron · doi:10.1016/j.neuron.2014.11.011 · Cited by 152 · see citing works
Brg1 is required for murine neural stem cell maintenance and gliogenesis
Matsumoto, S., Banine, F., Struve, J., Xing, R., Adams, C., Liu, Y., Metzger, D., Chambon, P., Rao, M. S., & Sherman, L. S. (2006) · Developmental Biology · doi:10.1016/j.ydbio.2005.10.044 · Cited by 147 · see citing works
Hsieh, J., & Eisch, A. J. (2010) · Neurobiology of Disease · doi:10.1016/j.nbd.2010.01.008 · Cited by 144 · see citing works
Intronic miR-26b controls neuronal differentiation by repressing its host transcript,<i>ctdsp2</i>
Dill, H., Linder, B., Fehr, A., & Fischer, U. (2012) · Genes & Development · doi:10.1101/gad.177774.111 · Cited by 125 · see citing works
Singh-Taylor, A., Molet, J., Jiang, S., Korosi, A., Bolton, J. L., Noam, Y., Simeone, K., Cope, J., Chen, Y., Mortazavi, A., et al. (2018) · Molecular Psychiatry · doi:10.1038/mp.2016.240 · Cited by 115 · see citing works
Ramaswami, G., Won, H., Gandal, M. J., Haney, J., Wang, J. C., Wong, C. C. Y., Sun, W., Prabhakar, S., Mill, J., & Geschwind, D. H. (2020) · Nature Communications · doi:10.1038/s41467-020-18526-1 · Cited by 113 · see citing works
Toffolo, E., Rusconi, F., Paganini, L., Tortorici, M., Pilotto, S., Heise, C., Verpelli, C., Tedeschi, G., Maffioli, E., Sala, C., et al. (2014) · Journal of Neurochemistry · doi:10.1111/jnc.12457 · Cited by 106 · see citing works
Michod, D., Bartesaghi, S., Khelifi, A., Bellodi, C., Berliocchi, L., Nicotera, P., & Salomoni, P. (2012) · Neuron · doi:10.1016/j.neuron.2012.02.021 · Cited by 93 · see citing works
Epigenetic Regulation of BDNF Gene during Development and Diseases
Chen, K.-W., & Chen, L. (2017) · International Journal of Molecular Sciences · doi:10.3390/ijms18030571 · Cited by 75 · see citing works
Dedifferentiation and neuronal repression define familial Alzheimer’s disease
Caldwell, A. B., Liu, Q., Schroth, G. P., Galasko, D. R., Yuan, S. H., Wagner, S. L., & Subramaniam, S. (2020) · Science Advances · doi:10.1126/sciadv.aba5933 · Cited by 69 · see citing works
Buffolo, F., Petrosino, V., Albini, M., Moschetta, M., Carlini, F., Floss, T., Kerlero de Rosbo, N., Cesca, F., Rocchi, A., Uccelli, A., et al. (2021) · Cell Death & Disease · doi:10.1038/s41419-021-03465-6 · Cited by 60 · see citing works
Neurogenetics and Epigenetics in Impulsive Behaviour: Impact on Reward Circuitry
Archer, T., & Blum, K. (2012) · Journal of Genetic Syndromes & Gene Therapy · doi:10.4172/2157-7412.1000115 · Cited by 54 · see citing works
Histone Deacetylases 1 and 2 in Memory Function
Pao, P.-C., & Tsai, L.-H. (2022) · ACS Chemical Neuroscience · doi:10.1021/acschemneuro.1c00775 · Cited by 34 · see citing works
Mozzi, A., Guerini, F. R., Forni, D., Costa, A. S., Nemni, R., Baglio, F., Cabinio, M., Riva, S., Pontremoli, C., Clerici, M., et al. (2017) · Scientific Reports · doi:10.1038/s41598-017-10245-w · Cited by 28 · see citing works
Therapeutic Potential of PTB Inhibition Through Converting Glial Cells to Neurons in the Brain
Fu, X.-D., & Mobley, W. C. (2023) · Annual Review of Neuroscience · doi:10.1146/annurev-neuro-083022-113120 · Cited by 16 · see citing works
- Authors
- Ballas, N., Grunseich, C., Lu, D. D., Speh, J. C., & Mandel, G.
- Venue
- Cell
- Publisher
- Elsevier BV
- Published
- 2005-05
- Volume
- 121
- Issue
- 4
- Pages
- 645-657
- ISSN
- 0092-8674
- Cited by
- 846
- References
- 2
- Language
- en
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
