Nuclear Receptor-Induced Chromosomal Proximity and DNA Breaks Underlie Specific Translocations in Cancer
Open accessAbstract
Chromosomal translocations are a hallmark of leukemia/lymphoma and also appear in solid tumors, but the underlying mechanism remains elusive. By establishing a cellular model that mimics the relative frequency of authentic translocation events without proliferation selection, we report mechanisms of nuclear receptor-dependent tumor translocations. Intronic binding of liganded androgen receptor (AR) first juxtaposes translocation loci by triggering intra- and interchromosomal interactions. AR then promotes site-specific DNA double-stranded breaks (DSBs) at translocation loci by recruiting two types of enzymatic activities induced by genotoxic stress and liganded AR, including activation-induced cytidine deaminase and the LINE-1 repeat-encoded ORF2 endonuclease. These enzymes synergistically generate site-selective DSBs at juxtaposed translocation loci that are ligated by nonhomologous end joining pathway for specific translocations. Our data suggest that the confluence of two parallel pathways initiated by liganded nuclear receptor and genotoxic stress underlies nonrandom tumor translocations, which may function in many types of tumors and pathological processes.
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NHEJ is error-prone and can cause genome structural variations, potentially leading to gene fusions with pathological gain or loss of function.
“NEHJ is error-prone and can cause genome structural variations, potentially leading to gene fusions with pathological gain or loss of function”
From Neuronal DNA double-strand breaks lead to genome structural variations and 3D genome disruption in neurodegeneration (2023) · cites this paper as [20]
DSBs are repaired via the classical non-homologous end joining (NHEJ) pathway in post-mitotic cells and can lead to genome structural variations.
“DSBs are repaired via the classical non-homologous end joining (NHEJ) pathway in post-mitotic cells and can lead to genome structural variations”
From Neuronal DNA double-strand breaks lead to genome structural variations and 3D genome disruption in neurodegeneration (2023) · cites this paper as [20]
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Cites
Recurrent Fusion of <i>TMPRSS2</i> and ETS Transcription Factor Genes in Prostate Cancer
Tomlins, S. A., Rhodes, D. R., Perner, S., Dhanasekaran, S. M., Mehra, R., Sun, X.-W., Varambally, S., Cao, X., Tchinda, J., Kuefer, R., et al. (2005) · Science · doi:10.1126/science.1117679 · Cited by 3,846 · see citing works
Epigenetics: A landscape takes shape
Goldberg, A. D., Allis, C. D., & Bernstein, E. (2007) · Cell · doi:10.1016/j.cell.2007.02.006 · Cited by 2,466 · see citing works
Histone H4-K16 Acetylation Controls Chromatin Structure and Protein Interactions
Shogren‐Knaak, M. A., Ishii, H., Sun, J.-M., Pazin, M. J., Davie, J., & Peterson, C. L. (2006) · Science · doi:10.1126/science.1124000 · Cited by 1,876 · see citing works
Androgen Receptor in Prostate Cancer
Heinlein, C. A., & Chang, C. (2004) · Endocrine Reviews · doi:10.1210/er.2002-0032 · Cited by 1,780 · see citing works
Cofactor Dynamics and Sufficiency in Estrogen Receptor–Regulated Transcription
Shang, Y., Hu, X., DiRenzo, J., Lazar, M. A., & Brown, M. A. (2000) · Cell · doi:10.1016/s0092-8674(00)00188-4 · Cited by 1,647 · see citing works
Elevated recombination rates in transcriptionally active DNA
Thomas, B. J., & Rothstein, R. J. (1989) · Cell · doi:10.1016/0092-8674(89)90584-9 · Cited by 1,633 · see citing works
MLL translocations, histone modifications and leukaemia stem-cell development
Krivtsov, A., & Armstrong, S. (2007) · Nature Reviews. Cancer · doi:10.1038/nrc2253 · Cited by 1,294 · see citing works
Mechanism and Regulation of Class Switch Recombination
Stavnezer, J., Guikema, J. E. J., & Schrader, C. E. (2008) · Annual Review of Immunology · doi:10.1146/annurev.immunol.26.021607.090248 · Cited by 1,117 · see citing works
Developmentally Regulated piRNA Clusters Implicate MILI in Transposon Control
Aravin, A. A., Sachidanandam, R., Girard, A., Tóth, K. F., & Hannon, G. J. (2007) · Science · doi:10.1126/science.1142612 · Cited by 1,033 · see citing works
Somatic mosaicism in neuronal precursor cells mediated by L1 retrotransposition
Muotri, A. R., Chu, V. T., Marchetto, M. C. N., Deng, W., Moran, J. V., & Gage, F. H. (2005) · Nature · doi:10.1038/nature03663 · Cited by 942 · see citing works
Distinct classes of chromosomal rearrangements create oncogenic ETS gene fusions in prostate cancer
Tomlins, S., Laxman, B., Dhanasekaran, S., Helgeson, B. E., Cao, X.-H., Morris, D. S., Menon, A., Jing, X.-J., Cao, Q., Han, B., et al. (2007) · Nature · doi:10.1038/nature06024 · Cited by 904 · see citing works
Methylated lysine 79 of histone H3 targets 53BP1 to DNA double-strand breaks
Huyen, Y., Zgheib, O., DiTullio Jr, R. A., Gorgoulis, V. G., Zacharatos, P., Petty, T. J., Sheston, E. A., Mellert, H. S., Stavridi, E. S., & Halazonetis, T. D. (2004) · Nature · doi:10.1038/nature03114 · Cited by 884 · see citing works
Specialized piRNA Pathways Act in Germline and Somatic Tissues of the Drosophila Ovary
Malone, C. D., Brennecke, J., Dus, M., Stark, A., McCombie, W. R., Sachidanandam, R., & Hannon, G. J. (2009) · Cell · doi:10.1016/j.cell.2009.03.040 · Cited by 864 · see citing works
A Topoisomerase IIß-Mediated dsDNA Break Required for Regulated Transcription
Ju, B., Lunyak, V. V., Perissi, V., García-Bassets, I., Rose, D. W., Glass, C. K., & Rosenfeld, M. G. (2006) · Science · doi:10.1126/science.1127196 · Cited by 842 · see citing works
Self-citationGenome instability: a mechanistic view of its causes and consequences
Aguilera, A., & Gómez‐González, B. (2008) · Nature Reviews Genetics · doi:10.1038/nrg2268 · Cited by 806 · see citing works
Transcription-targeted DNA deamination by the AID antibody diversification enzyme
Chaudhuri, J., Tian, M., Khuong, C., Chua, K. F., Pinaud, E., & Alt, F. W. (2003) · Nature · doi:10.1038/nature01574 · Cited by 746 · see citing works
Origins of chromosome translocations in childhood leukaemia
Greaves, M. F., & Wiemels, J. L. (2003) · Nature reviews. Cancer · doi:10.1038/nrc1164 · Cited by 701 · see citing works
Wang, Q., Li, W., Liu, X. S., Carroll, J. S., Jänne, O. A., Keeton, E. K., Chinnaiyan, A. M., Pienta, K. J., & Brown, M. A. (2007) · Molecular Cell · doi:10.1016/j.molcel.2007.05.041 · Cited by 689 · see citing works
DNA Demethylation in Zebrafish Involves the Coupling of a Deaminase, a Glycosylase, and Gadd45
Rai, K., Huggins, I. J., James, S. R., Karpf, A. R., Jones, D. A., & Cairns, B. R. (2008) · Cell · doi:10.1016/j.cell.2008.11.042 · Cited by 657 · see citing works
Class-switch recombination: interplay of transcription, DNA deamination and DNA repair
Chaudhuri, J., & Alt, F. W. (2004) · Nature reviews. Immunology · doi:10.1038/nri1395 · Cited by 623 · see citing works
Chromosome territories – a functional nuclear landscape
Cremer, T., Cremer, M., Dietzel, S., Müller, S., Solovei, I. V., & Fakan, S. (2006) · Current Opinion in Cell Biology · doi:10.1016/j.ceb.2006.04.007 · Cited by 601 · see citing works
Molecular Mechanism of Class Switch Recombination: Linkage with Somatic Hypermutation
Honjo, T., Kinoshita, K., & Muramatsu, M. (2002) · Annual Review of Immunology · doi:10.1146/annurev.immunol.20.090501.112049 · Cited by 598 · see citing works
DNA end-joining: from yeast to man
Critchlow, S. E., & Jackson, S. P. (1998) · Trends in Biochemical Sciences · doi:10.1016/s0968-0004(98)01284-5 · Cited by 584 · see citing works
Perissi, V., Aggarwal, A. K., Glass, C. K., Rose, D. W., & Rosenfeld, M. G. (2004) · Cell · doi:10.1016/s0092-8674(04)00133-3 · Cited by 566 · see citing works
Self-citationCorral, J., Lavenir, I., Impey, H. L., Warren, A. J., Forster, A. M., Larson, T., Bell, S. E., McKenzie, A. N. J., King, G., & Rabbitts, T. H. (1996) · Cell · doi:10.1016/s0092-8674(00)81269-6 · Cited by 520 · see citing works
In situ visualization of DNA double-strand break repair in human fibroblasts
Nelms, B. E., Maser, R. S., MacKay, J. F., Lagally, M. G., & Petrini, J. H. J. (1998) · Science · doi:10.1126/science.280.5363.590 · Cited by 500 · see citing works
Roles of ATM and NBS1 in chromatin structure modulation and DNA double-strand break repair
Berkovich, E., Monnat, R. J., & Kastan, M. B. (2007) · Nature Cell Biology · doi:10.1038/ncb1599 · Cited by 477 · see citing works
AID Is Required for the Chromosomal Breaks in c-myc that Lead to c-myc/IgH Translocations
Robbiani, D. F., Bothmer, A., Callén, E., Reina‐San‐Martin, B., Dorsett, Y., Difilippantonio, S., Bolland, D. J., Chen, H. T., Corcoran, A. E., Nussenzweig, A., et al. (2008) · Cell · doi:10.1016/j.cell.2008.09.062 · Cited by 468 · see citing works
Proximity of Chromosomal Loci That Participate in Radiation-Induced Rearrangements in Human Cells
Nikiforova, M. N., Stringer, J. R., Blough, R. I., Medvedovic, M., Fagin, J. A., & Nikiforov, Y. E. (2000) · Science · doi:10.1126/science.290.5489.138 · Cited by 465 · see citing works
Spatial proximity of translocation-prone gene loci in human lymphomas
Roix, J. J., McQueen, P. G., Munson, P. J., Parada, L. A., & Misteli, T. (2003) · Nature Genetics · doi:10.1038/ng1177 · Cited by 414 · see citing works
Wang, J., Cai, Y., Ren, C., & Ittmann, M. (2006) · Cancer Research · doi:10.1158/0008-5472.can-06-1966 · Cited by 406 · see citing works
Multiple pathways cooperate in the suppression of genome instability in Saccharomyces cerevisiae
Myung, K., Chen, C. C., & Kolodner, R. (2001) · Nature · doi:10.1038/35082608 · Cited by 369 · see citing works
Ng, H., Ciccone, D. N., Morshead, K. B., Oettinger, M. A., & Struhl, K. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0437846100 · Cited by 315 · see citing works
Jhunjhunwala, S., van Zelm, M. C., Peak, M. M., Cutchin, S., Riblet, R. J., van Dongen, J. J. M., Grosveld, F. G., Knoch, T., & Murre, C. (2008) · Cell · doi:10.1016/j.cell.2008.03.024 · Cited by 287 · see citing works
Mighty Piwis Defend the Germline against Genome Intruders
O’Donnell, K. A., & Boeke, J. D. (2007) · Cell · doi:10.1016/j.cell.2007.03.028 · Cited by 261 · see citing works
Hu, Q., Kwon, Y., Núñez, E., Cardamone, M. D., Hutt, K. R., Ohgi, K. A., García-Bassets, I., Rose, D. W., Glass, C. K., Rosenfeld, M. G., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0810634105 · Cited by 259 · see citing works
Self-citationFrom RPA to BRCA2: lessons from single-stranded DNA binding by the OB-fold
Bochkarev, A. V., & Bochkareva, E. S. (2004) · Current Opinion in Structural Biology · doi:10.1016/j.sbi.2004.01.001 · Cited by 220 · see citing works
Epigenetic regulation of heterochromatic DNA stability
Peng, J. C., & Karpen, G. H. (2008) · Current Opinion in Genetics & Development · doi:10.1016/j.gde.2008.01.021 · Cited by 209 · see citing works
Transcription in four dimensions: nuclear receptor‐directed initiation of gene expression
Métivier, R., Reid, G., & Gannon, F. (2006) · EMBO Reports · doi:10.1038/sj.embor.7400626 · Cited by 207 · see citing works
Neves, H., Ramos, C., da Silva, M. G., Parreira, A., & Parreira, L. (1999) · Blood · doi:10.1182/blood.v93.4.1197 · Cited by 207 · see citing works
Causes of oncogenic chromosomal translocation
Aplan, P. D. (2005) · Trends in Genetics · doi:10.1016/j.tig.2005.10.002 · Cited by 197 · see citing works
Jasplakinolide: An Actin-Specific Reagent that Promotes Actin Polymerization
Holzinger, A. (2009) · Methods in molecular biology · doi:10.1007/978-1-60761-376-3_4 · Cited by 174 · see citing works
Gamma radiation increases endonuclease-dependent L1 retrotransposition in a cultured cell assay
Farkash, E. A. (2006) · Nucleic Acids Research · doi:10.1093/nar/gkj522 · Cited by 141 · see citing works
Actin and myosin as transcription factors
Grummt, I. (2006) · Current Opinion in Genetics & Development · doi:10.1016/j.gde.2006.02.001 · Cited by 136 · see citing works
LUCAS, J., True, L. D., Hawley, S. J., Matsumura, M., Morrissey, C. M., Vessella, R. L., & Nelson, P. (2008) · The Journal of Pathology · doi:10.1002/path.2330 · Cited by 135 · see citing works
A potential role for the nucleolus in L1 retrotransposition
Goodier, J. L. (2004) · Human Molecular Genetics · doi:10.1093/hmg/ddh118 · Cited by 106 · see citing works
Artificial neural network analysis (ANNA) of prostatic transrectal ultrasound
Loch, T., Leuschner, I., Genberg, C., Weichert-Jacobsen, K., K�ppers, F., Yfantis, E. A., Evans, M. S., Tsarev, V., & St�ckle, M. (1999) · The Prostate · doi:10.1002/(sici)1097-0045(19990515)39:3 · Cited by 101 · see citing works
Selective induction of leukemia-associated fusion genes by high-dose ionizing radiation.
Deininger, M. W., Bose, S., Góra‐Tybor, J., et al. (1998) · PubMed · Cited by 87 · see citing works
Mutations in the motor domain modulate myosin activity and myofibril organization
Wang, Q., Moncman, C. L., & Winkelmann, D. A. (2003) · Journal of Cell Science · doi:10.1242/jcs.00709 · Cited by 65 · see citing works
Gadd45 Family Proteins Are Coactivators of Nuclear Hormone Receptors
Yi, Y. W., Kim, D., Jung, N., Hong, S.-S., Lee, H.-S., & Bae, I. (2000) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.2000.2760 · Cited by 58 · see citing works
Berkovich, E., Monnat, R. J., & Kastan, M. B. (2008) · Nature Protocols · doi:10.1038/nprot.2008.54 · Cited by 57 · see citing works
Banerjee, S., Smith, S. N., Oum, J., Liaw, H., Hwang, J., Sikdar, N., Motegi, A., Lee, S. E., & Myung, K. (2008) · The Journal of Cell Biology · doi:10.1083/jcb.200711146 · Cited by 48 · see citing works
Nuclear actin: to polymerize or not to polymerize
Hofmann, W. A., & de Lanerolle, P. (2006) · The Journal of Cell Biology · doi:10.1083/jcb.200601095 · Cited by 46 · see citing works
Shaffer, D. R., & Pandolfi, P. P. (2006) · Nature Medicine · doi:10.1038/nm0106-14 · Cited by 22 · see citing works
Does topoisomerase II specifically recognize and cleave hairpins, cruciforms and crossovers of DNA?
René, B., Fermandjian, S., & Mauffret, O. (2007) · Biochimie · doi:10.1016/j.biochi.2007.02.011 · Cited by 13 · see citing works
Lymphocyte development: overview
Rajewsky, K., & von Boehmer, H. (2008) · Current Opinion in Immunology · doi:10.1016/j.coi.2008.04.005 · Cited by 11 · see citing works
LINE‐1 Retrotransposition: Impact on Genome Stabilityand Diversity and Human Disease
Prak, N. L., & Haoudi, A. (2006) · BioMed Research International · doi:10.1155/jbb/2006/37049 · Cited by 7 · see citing works
Chromosome Dynamics: Actin’s Gone Fishing
Rizk, R. S., & Walczak, C. (2005) · Current Biology · doi:10.1016/j.cub.2005.10.004 · Cited by 3 · see citing works
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Ghezraoui, H., Piganeau, M., Renouf, B., Renaud, J.-B., Sallmyr, A., Ruis, B., Oh, S., Tomkinson, A. E., Hendrickson, E. A., Giovannangeli, C., et al. (2014) · Molecular Cell · doi:10.1016/j.molcel.2014.08.002 · Cited by 351 · see citing works
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Coufal, N. G., Garcia-Perez, J. L., Peng, G. E., Marchetto, M. C. N., Muotri, A. R., Mu, Y., Carson, C. T., Macia, A., Moran, J. V., & Gage, F. H. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1100273108 · Cited by 229 · see citing works
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Liu, E. Y., Russ, J., Cali, C. P., Phan, J. M., Amlie-Wolf, A., & Lee, E. B. (2019) · Cell Reports · doi:10.1016/j.celrep.2019.04.003 · Cited by 231 · see citing works
“expression of repetitive genomic elements (De Cecco et al., 2019; Lin et al., 2009; Sciamanna et al., 2013).”
Li, X., Baek, G., Ramanand, S. G., Sharp, A., Gao, Y., Yuan, W., Welti, J., Rodrigues, D. N., Dolling, D., Figueiredo, I., et al. (2018) · Cell Reports · doi:10.1016/j.celrep.2017.12.078 · Cited by 148 · see citing works
Dileep, V., Boix, C. A., Mathys, H., Marco, A., Welch, G. M., Meharena, H. S., Loon, A., Jeloka, R., Peng, Z., Bennett, D. A., et al. (2023) · Cell · doi:10.1016/j.cell.2023.08.038 · Cited by 130 · see citing works
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(2010) · Advances in cancer research · doi:10.1016/s0065-230x(10)07005-3 · Cited by 117 · see citing works
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- Authors
- Lin, C., Yang, L., Tanasa, B., Hutt, K., Ju, B.-G., Ohgi, K. A., Zhang, J., Rose, D. W., Fu, X.-D., Glass, C. K., & Rosenfeld, M. G.
- Affiliations
- Howard Hughes Medical Institute (US)
- University of California San Diego (US)
- Corresponding author
- Rosenfeld, Michael G.
- ORCID
- Venue
- Cell
- Publisher
- Elsevier BV
- Published
- 2009-12
- Volume
- 139
- Issue
- 6
- Pages
- 1069-1083
- ISSN
- 0092-8674 (ISSN-L)
- PMC
- PMC2812435
- OpenAlex
- W2104400024
- Cited by
- 576
- References
- 59
- Citations by year
- 2026: 5 · 2025: 10 · 2024: 5 · 2023: 18 · 2022: 17 · 2021: 27 · 2020: 15 · 2019: 23 · 2018: 29 · 2017: 38 · 2016: 36 · 2015: 38 · 2014: 58 · 2013: 81 · 2012: 52
- FWCI
- 23.60
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Cell (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- Howard Hughes Medical Institute
- Prostate Cancer Foundation
- Susan G. Komen
- National Institutes of Health
- U.S. Public Health Service (KG080247)
- National Heart, Lung, and Blood Institute (R01HL065445)
- National Cancer Institute (R01CA097134, CA97134)
- National Institute of Diabetes and Digestive and Kidney Diseases (DK39949, DK-18477, R37DK039949, R01DK018477)
- National Institute of Neurological Disorders and Stroke (R01NS034934, NS 34934)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Chromatin Remodeling and Cancer
- Keywords
- chromosomal translocation, nuclear receptors, androgen receptor, DNA double-strand breaks, activation-induced cytidine deaminase, non-homologous end joining, genotoxic stress, interchromosomal interactions, leukemia, solid tumors
- MeSH terms
- Transcriptional Regulator ERG, DNA Damage, DNA Repair, DNA-Binding Proteins, Humans, Introns, Male, Prostatic Neoplasms, Receptors, Androgen, Serine Endopeptidases, Transcription Factors, Transcription, Genetic, Translocation, Genetic, Trans-Activators, Open Reading Frames, Long Interspersed Nucleotide Elements, Cell Line, Tumor
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