Long-Range Chromatin Interactions

An integrated encyclopedia of DNA elements in the human genome

The ENCODE Project Consortium (2012) · Nature · doi:10.1038/nature11247 · Cited by 18,072 · see citing works

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

Lieberman-Aiden, E., van Berkum, N. L., Williams, L., Imakaev, M., Ragoczy, T., Telling, A., Amit, I., Lajoie, B. R., Sabo, P. J., Dorschner, M. O., et al. (2009) · Science · doi:10.1126/science.1181369 · Cited by 8,898 · see citing works

Topological domains in mammalian genomes identified by analysis of chromatin interactions

Dixon, J. R., Selvaraj, S., Yue, F., Kim, A., Li, Y., Shen, Y., Hu, M., Liu, J. S., & Ren, B. (2012) · Nature · doi:10.1038/nature11082 · Cited by 6,829 · see citing works

Capturing Chromosome Conformation

Dekker, J., Rippe, K., Dekker, M., & Kleckner, N. (2002) · Science · doi:10.1126/science.1067799 · Cited by 3,652 · see citing works

Spatial partitioning of the regulatory landscape of the X-inactivation centre

Nora, E. P., Lajoie, B. R., Schulz, E. G., Giorgetti, L., Okamoto, I., Servant, N., Piolot, T., van Berkum, N. L., Meisig, J., Sedat, J., et al. (2012) · Nature · doi:10.1038/nature11049 · Cited by 2,895 · see citing works

Three-dimensional folding and functional organization principles of the Drosophila genome

Sexton, T., Yaffe, E., Kenigsberg, E., Bantignies, F., Leblanc, B., Hoichman, M., Parrinello, H., Tanay, A., & Cavalli, G. (2012) · Cell · doi:10.1016/j.cell.2012.01.010 · Cited by 1,983 · see citing works

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

Guelen, L., Pagie, L., Brasset, É., Meuleman, W. R. A., Faza, M. B., Talhout, W., Eussen, B. H. J., de Klein, A., Wessels, L. F. A., de Laat, W. L., et al. (2008) · Nature · doi:10.1038/nature06947 · Cited by 1,959 · see citing works

Mediator and cohesin connect gene expression and chromatin architecture

Kagey, M. H., Newman, J. J., Bilodeau, S., Zhan, Y., Orlando, D. A., van Berkum, N. L., Ebmeier, C. C., Goossens, J., Rahl, P. B., Levine, S. S., et al. (2010) · Nature · doi:10.1038/nature09380 · Cited by 1,939 · see citing works

An oestrogen-receptor-α-bound human chromatin interactome

Fullwood, M. J., Liu, M. H., Pan, Y. F., Liu, J., Han, X., Mohamed, Y. B., Orlov, Y. L., Velkov, S., Ho, A., Poh, H. M., et al. (2009) · Nature · doi:10.1038/nature08497 · Cited by 1,728 · see citing works

CTCF: Master Weaver of the Genome

Phillips‐Cremins, J. E., & Corces, V. G. (2009) · Cell · doi:10.1016/j.cell.2009.06.001 · Cited by 1,540 · see citing works

A User's Guide to the Encyclopedia of DNA Elements (ENCODE)

The ENCODE Project Consortium (2011) · PLoS Biology · doi:10.1371/journal.pbio.1001046 · Cited by 1,495 · see citing works

The long-range interaction landscape of gene promoters

Sanyal, A., Lajoie, B. R., Jain, G., & Dekker, J. (2012) · Nature · doi:10.1038/nature11279 · Cited by 1,489 · see citing works

Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture–on-chip (4C)

Simonis, M., Klous, P., Splinter, E., Moshkin, Y., Willemsen, R., de Wit, E., van Steensel, B., & de Laat, W. (2006) · Nature Genetics · doi:10.1038/ng1896 · Cited by 1,386 · see citing works

A map of the cis-regulatory sequences in the mouse genome

Shen, Y., Yue, F., McCleary, D. F., Ye, Z., Edsall, L., Kuan, S., Wagner, U., Dixon, J., Lee, L., Lobanenkov, V. V., et al. (2012) · Nature · doi:10.1038/nature11243 · Cited by 1,361 · cited 1× · see citing works

Looping and Interaction between Hypersensitive Sites in the Active β-globin Locus

Tolhuis, B., Palstra, R.-J., Splinter, E., Grosveld, F., & de Laat, W. (2002) · Molecular Cell · doi:10.1016/s1097-2765(02)00781-5 · Cited by 1,344 · see citing works

Target-enrichment strategies for next-generation sequencing

Mamanova, L., Coffey, A. J., Scott, C. E., Kozarewa, I., Turner, E. H., Kumar, A., Howard, E. K., Shendure, J., & Turner, D. (2010) · Nature Methods · doi:10.1038/nmeth.1419 · Cited by 1,221 · see citing works

Control of the Embryonic Stem Cell State

Young, R. A. (2011) · Cell · doi:10.1016/j.cell.2011.01.032 · Cited by 1,189 · see citing works

Chromosome Conformation Capture Carbon Copy (5C): A massively parallel solution for mapping interactions between genomic elementsPreprint

Dostie, J., Richmond, T., Arnaout, R., Selzer, R. R., Lee, W. L., Honan, T., Rubio, E. D., Krumm, A., Lamb, J., Nusbaum, C., et al. (2006) · Genome Research · doi:10.1101/gr.5571506 · Cited by 1,182 · see citing works

Controlling the double helix

Felsenfeld, G., & Groudine, M. T. (2003) · Nature · doi:10.1038/nature01411 · Cited by 1,153 · see citing works

Beyond the Sequence: Cellular Organization of Genome Function

Misteli, T. (2007) · Cell · doi:10.1016/j.cell.2007.01.028 · Cited by 1,140 · see citing works

Active genes dynamically colocalize to shared sites of ongoing transcription

Osborne, C. S., Chakalova, L., Brown, K. E., Carter, D., Horton, A., Debrand, E., Goyenechea, B., Mitchell, J. A., Lopes, S. M. C. D. S., Reik, W., et al. (2004) · Nature Genetics · doi:10.1038/ng1423 · Cited by 1,046 · see citing works

Analysis of the Vertebrate Insulator Protein CTCF-Binding Sites in the Human Genome

Kim, T. H., Abdullaev, Z., Smith, A. D., Ching, K. A., Loukinov, D. I., Green, R. D., Zhang, M. Q., Lobanenkov, V. V., & Ren, B. (2007) · Cell · doi:10.1016/j.cell.2006.12.048 · Cited by 1,022 · see citing works

Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions

Zhao, Z., Tavoosidana, G., Sjölinder, M., Göndör, A., Mariano, P., Wang, S., Kanduri, C., Lezcano, M., Sandhu, K. S., Singh, U., et al. (2006) · Nature Genetics · doi:10.1038/ng1891 · Cited by 957 · see citing works

Differences in the Localization and Morphology of Chromosomes in the Human Nucleus

Croft, J. A., Bridger, J. M., Boyle, S., Perry, P., Teague, P., & Bickmore, W. A. (1999) · The Journal of Cell Biology · doi:10.1083/jcb.145.6.1119 · Cited by 933 · see citing works

Functional and Mechanistic Diversity of Distal Transcription Enhancers

Bulger, M., & Groudine, M. (2011) · Cell · doi:10.1016/j.cell.2011.01.024 · Cited by 803 · see citing works

Transcriptional repression mediated by repositioning of genes to the nuclear lamina

Reddy, K. L., Zullo, J., Bertolino, E., & Singh, H. (2008) · Nature · doi:10.1038/nature06727 · Cited by 785 · see citing works

Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions

Lanctôt, C., Cheutin, T., Cremer, M., Cavalli, G., & Cremer, T. (2007) · Nature Reviews Genetics · doi:10.1038/nrg2041 · Cited by 781 · see citing works

tRNA biology charges to the frontPreprint

Phizicky, E. M., & Hopper, A. K. (2010) · Genes & Development · doi:10.1101/gad.1956510 · Cited by 764 · see citing works

CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locus.

Splinter, E., Heath, H., Kooren, J., Palstra, R.-J., Klous, P., Grosveld, F., Galjart, N., & de Laat, W. (2007) · Genes & Development · doi:10.1016/j.bcmd.2006.10.131 · Cited by 742 · see citing works

Interchromosomal associations between alternatively expressed loci

Spilianakis, C. G., Lalioti, M. D., Town, T., Lee, G. R., & Flavell, R. A. (2005) · Nature · doi:10.1038/nature03574 · Cited by 726 · see citing works

Subnuclear Compartmentalization of Immunoglobulin Loci During Lymphocyte Development

Kosak, S. T., Skok, J. A., Medina, K. L., Riblet, R. J., Beau, M. M. L., Fisher, A. G., & Singh, H. (2002) · Science · doi:10.1126/science.1068768 · Cited by 722 · see citing works

Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells

Schoenfelder, S., Sexton, T., Chakalova, L., Cope, N. F., Horton, A., Andrews, S., Kurukuti, S., Mitchell, J. A., Umlauf, D., Dimitrova, D. S., et al. (2009) · Nature Genetics · doi:10.1038/ng.496 · Cited by 710 · see citing works

Genomic Imprinting in MammalsPreprint

Barlow, D. P., & Bartolomei, M. S. (2014) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a018382 · Cited by 706 · see citing works

The Hierarchy of the 3D Genome

Gibcus, J. H., & Dekker, J. (2013) · Molecular Cell · doi:10.1016/j.molcel.2013.02.011 · Cited by 695 · see citing works

Intermingling of Chromosome Territories in Interphase Suggests Role in Translocations and Transcription-Dependent Associations

Branco, M. R., & Pombo, A. (2006) · PLoS Biology · doi:10.1371/journal.pbio.0040138 · Cited by 685 · see citing works

The spatial organization of human chromosomes within the nuclei of normal and emerin-mutant cells

Boyle, S. (2001) · Human Molecular Genetics · doi:10.1093/hmg/10.3.211 · Cited by 681 · see citing works

CTCF mediates long-range chromatin looping and local histone modification in the β-globin locus

Splinter, E., Heath, H., Kooren, J., Palstra, R.-J., Klous, P., Grosveld, F., Galjart, N., & de Laat, W. (2006) · Genes & Development · doi:10.1101/gad.399506 · Cited by 677 · see citing works

Visualization of focal sites of transcription within human nuclei.

Jackson, D. A., Hassan, A. B., Errington, R. J., & Cook, P. R. (1993) · The EMBO Journal · doi:10.1002/j.1460-2075.1993.tb05747.x · Cited by 663 · see citing works

Characterization of the Drosophila melanogaster genome at the nuclear lamina

Pickersgill, H., Kalverda, B., de Wit, E., Talhout, W., Fornerod, M., & van Steensel, B. (2006) · Nature Genetics · doi:10.1038/ng1852 · Cited by 656 · see citing works

Interchromosomal Interactions and Olfactory Receptor Choice

Lomvardas, S., Barnea, G., Pisapia, D. J., Mendelsohn, M. M., Kirkland, J., & Axel, R. (2006) · Cell · doi:10.1016/j.cell.2006.06.035 · Cited by 633 · see citing works

Genome-Wide Localization of the Nuclear Transport Machinery Couples Transcriptional Status and Nuclear Organization

Casolari, J. M., Brown, C. R., Komili, S., West, J. A., Hieronymus, H., & Silver, P. A. (2004) · Cell · doi:10.1016/s0092-8674(04)00448-9 · Cited by 604 · see citing works

Recruitment to the Nuclear Periphery Can Alter Expression of Genes in Human Cells

Finlan, L. E., Sproul, D., Thomson, I., Boyle, S., Kerr, E. A., Perry, P., Ylstra, B., Chubb, J. R., & Bickmore, W. A. (2008) · PLoS Genetics · doi:10.1371/journal.pgen.1000039 · Cited by 584 · see citing works

Nuclear Receptor-Induced Chromosomal Proximity and DNA Breaks Underlie Specific Translocations in Cancer

Lin, C., Yang, L., Tanasa, B., Hutt, K., Ju, B.-G., Ohgi, K. A., Zhang, J., Rose, D. W., Fu, X.-D., Glass, C. K., et al. (2009) · Cell · doi:10.1016/j.cell.2009.11.030 · Cited by 576 · see citing works

The β-globin nuclear compartment in development and erythroid differentiation

Palstra, R.-J., Tolhuis, B., Splinter, E., Nijmeijer, R., Grosveld, F., & de Laat, W. (2003) · Nature Genetics · doi:10.1038/ng1244 · Cited by 559 · see citing works

SATB1 packages densely looped, transcriptionally active chromatin for coordinated expression of cytokine genes

Cai, S., Lee, C. C., & Kohwi-shigematsu, T. (2006) · Nature Genetics · doi:10.1038/ng1913 · Cited by 547 · see citing works

Spatial Organization of the Mouse Genome and Its Role in Recurrent Chromosomal Translocations

Zhang, Y., McCord, R. P., Ho, Y.-J., Lajoie, B. R., Hildebrand, D. G., Simon, A. C., Becker, M. S., Alt, F. W., & Dekker, J. (2012) · Cell · doi:10.1016/j.cell.2012.02.002 · Cited by 545 · see citing works

Genome architectures revealed by tethered chromosome conformation capture and population-based modeling

Kalhor, R., Tjong, H., Jayathilaka, N., Alber, F., & Chen, L. (2011) · Nature Biotechnology · doi:10.1038/nbt.2057 · Cited by 532 · see citing works

The Epigenetics of rRNA Genes: From Molecular to Chromosome Biology

McStay, B., & Grummt, I. (2008) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev.cellbio.24.110707.175259 · Cited by 527 · see citing works

Cohesins form chromosomal cis-interactions at the developmentally regulated IFNG locus

Hadjur, S., Williams, L. M., Ryan, N. K., Cobb, B. S., Sexton, T., Fraser, P., Fisher, A. G., & Merkenschlager, M. (2009) · Nature · doi:10.1038/nature08079 · Cited by 525 · see citing works

Positional stability of single double-strand breaks in mammalian cells

Soutoglou, E., Dorn, J. F., Sengupta, K., Jasin, M., Nussenzweig, A., Ried, T., Danuser, G., & Misteli, T. (2007) · Nature Cell Biology · doi:10.1038/ncb1591 · Cited by 509 · see citing works

Lamin A-dependent misregulation of adult stem cells associated with accelerated ageing

Scaffidi, P., & Misteli, T. (2008) · Nature Cell Biology · doi:10.1038/ncb1708 · Cited by 500 · see citing works

Proximity among Distant Regulatory Elements at the β-Globin Locus Requires GATA-1 and FOG-1

Vakoc, C. R., Letting, D. L., Gheldof, N., Sawado, T., Bender, M. A., Groudine, M., Weiss, M. J., Dekker, J., & Blobel, G. A. (2005) · Molecular Cell · doi:10.1016/j.molcel.2004.12.028 · Cited by 490 · see citing works

Looping versus linking: toward a model for long-distance gene activationPreprint

Bulger, M., & Groudine, M. T. (1999) · Genes & Development · doi:10.1101/gad.13.19.2465 · Cited by 483 · see citing works

The nuclear lamins

Krohne, G., & Benavente, R. (1986) · Experimental Cell Research · doi:10.1016/0014-4827(86)90421-0 · Cited by 479 · see citing works

CTCF Tethers an Insulator to Subnuclear Sites, Suggesting Shared Insulator Mechanisms across Species

Yusufzai, T. M., Tagami, H., Nakatani, Y., & Felsenfeld, G. (2004) · Molecular Cell · doi:10.1016/s1097-2765(04)00029-2 · Cited by 479 · see citing works

A Regulatory Archipelago Controls Hox Genes Transcription in Digits

Montavon, T., Soshnikova, N., Mascrez, B., Joye, E., Thevenet, L., Splinter, E., de Laat, W., Spitz, F., & Duboule, D. (2011) · Cell · doi:10.1016/j.cell.2011.10.023 · Cited by 477 · see citing works

Genome-wide Translocation Sequencing Reveals Mechanisms of Chromosome Breaks and Rearrangements in B Cells

Chiarle, R., Zhang, Y., Frock, R. L., Lewis, S. M., Molinié, B., Ho, Y.-J., Myers, D. R., Choi, V. W., Compagno, M., Malkin, D. J., et al. (2011) · Cell · doi:10.1016/j.cell.2011.07.049 · Cited by 475 · see citing works

The emerging role of nuclear architecture in DNA repair and genome maintenance

Misteli, T., & Soutoglou, E. (2009) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2651 · Cited by 468 · see citing works

The nucleolus

Pederson, T. (2011) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a000638 · Cited by 455 · see citing works

Chromatin higher-order structures and gene regulation

Li, G., & Reinberg, D. (2011) · Current Opinion in Genetics & Development · doi:10.1016/j.gde.2011.01.022 · Cited by 454 · see citing works

Nucleoporins Directly Stimulate Expression of Developmental and Cell-Cycle Genes Inside the Nucleoplasm

Kalverda, B., Pickersgill, H., Shloma, V. V., & Fornerod, M. W. J. (2010) · Cell · doi:10.1016/j.cell.2010.01.011 · Cited by 442 · see citing works

A Kinetic Framework for a Mammalian RNA Polymerase in Vivo

Dundr, M., Hoffmann‐Rohrer, U., Hu, Q., Grummt, I., Rothblum, L. I., Phair, R. D., & Misteli, T. (2002) · Science · doi:10.1126/science.1076164 · Cited by 436 · see citing works

Polycomb-dependent regulatory contacts between distant Hox loci in Drosophila

Bantignies, F., Roure, V., Comet, I., Leblanc, B., Schuettengruber, B., Bonnet, J., Tixier, V., Mas, A., & Cavalli, G. (2011) · Cell · doi:10.1016/j.cell.2010.12.026 · Cited by 429 · see citing works

Functional implications of genome topology

Cavalli, G., & Misteli, T. (2013) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.2474 · Cited by 415 · see citing works

Spatial proximity of translocation-prone gene loci in human lymphomas

Roix, J. J., McQueen, P. G., Munson, P. J., Parada, L. A., & Misteli, T. (2003) · Nature Genetics · doi:10.1038/ng1177 · Cited by 414 · see citing works

Gene Recruitment of the Activated INO1 Locus to the Nuclear Membrane

Brickner, J. H., & Walter, P. (2004) · PLoS Biology · doi:10.1371/journal.pbio.0020342 · Cited by 401 · see citing works

Induced Chromosomal Proximity and Gene Fusions in Prostate Cancer

Mani, R. S., Tomlins, S. A., Callahan, K., Ghosh, A., Nyati, M. K., Varambally, S., Palanisamy, N., & Chinnaiyan, A. M. (2009) · Science · doi:10.1126/science.1178124 · Cited by 391 · see citing works

Myc Dynamically and Preferentially Relocates to a Transcription Factory Occupied by Igh

Osborne, C. S., Chakalova, L., Mitchell, J. A., Horton, A., Wood, A. L., Bolland, D. J., Corcoran, A. E., & Fraser, P. (2007) · PLoS Biology · doi:10.1371/journal.pbio.0050192 · Cited by 391 · see citing works

A genetic locus targeted to the nuclear periphery in living cells maintains its transcriptional competence

Kumaran, R. I., & Spector, D. L. (2008) · The Journal of Cell Biology · doi:10.1083/jcb.200706060 · Cited by 388 · see citing works

Transient Homologous Chromosome Pairing Marks the Onset of X Inactivation

Xu, N., Tsai, C., & Lee, J. T. (2006) · Science · doi:10.1126/science.1122984 · Cited by 384 · see citing works

Tissue-specific spatial organization of genomes

Parada, L. A., McQueen, P. G., & Misteli, T. (2004) · Genome biology · doi:10.1186/gb-2004-5-7-r44 · Cited by 379 · see citing works

Nuclear Lamins

Dechat, T., Adam, S. A., Taimen, P., Shimi, T., & Goldman, R. D. (2010) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a000547 · Cited by 379 · see citing works

Chromosome territories

Meaburn, K. J., & Misteli, T. (2007) · Nature · doi:10.1038/445379a · Cited by 367 · see citing works

Translocation-Capture Sequencing Reveals the Extent and Nature of Chromosomal Rearrangements in B Lymphocytes

Klein, I. A., Resch, W., Janković, M., Oliveira, T. Y., Yamane, A., Nakahashi, H., Virgilio, M. D., Bothmer, A., Nussenzweig, A., Robbiani, D. F., et al. (2011) · Cell · doi:10.1016/j.cell.2011.07.048 · Cited by 353 · see citing works

The active spatial organization of the β-<i>globin</i> locus requires the transcription factor EKLF

Drissen, R., Palstra, R.-J., Gillemans, N., Splinter, E., Grosveld, F., Philipsen, S., & de Laat, W. (2004) · Genes &amp; Development · doi:10.1101/gad.317004 · Cited by 352 · see citing works

Spatial organization of gene expression: the active chromatin hub

de Laat, W. L., & Grosveld, F. G. (2003) · Chromosome Research · doi:10.1023/a:1024922626726 · Cited by 349 · see citing works

The three 'C' s of chromosome conformation capture: controls, controls, controls

Dekker, J. (2005) · Nature Methods · doi:10.1038/nmeth823 · Cited by 347 · see citing works

Correlated alterations in genome organization, histone methylation, and DNA–lamin A/C interactions in Hutchinson-Gilford progeria syndromePreprint

McCord, R. P., Nazario-Toole, A., Zhang, H., Chines, P. S., Zhan, Y., Erdos, M. R., Collins, F. S., Dekker, J., & Cao, K. (2012) · Genome Research · doi:10.1101/gr.138032.112 · Cited by 326 · see citing works

Transient colocalization of X-inactivation centres accompanies the initiation of X inactivation

Bacher, C. P., Guggiari, M., Brors, B., Augui, S., Clerc, P., Avner, P. R., Eils, R., & Heard, É. (2006) · Nature Cell Biology · doi:10.1038/ncb1365 · Cited by 321 · see citing works

ChIA-PET tool for comprehensive chromatin interaction analysis with paired-end tag sequencing

Li, G., Fullwood, M. J., Han, X., Mulawadi, F. H., Velkov, S., Vega, V. B., Ariyaratne, P. N., Mohamed, Y. B., Ooi, H.-S., Tennakoon, C., et al. (2010) · Genome biology · doi:10.1186/gb-2010-11-2-r22 · Cited by 316 · see citing works

Nucleolar Clustering of Dispersed tRNA Genes

Thompson, M. J., Haeusler, R. A., Good, P. D., & Engelke, D. R. (2003) · Science · doi:10.1126/science.1089814 · Cited by 307 · see citing works

Polycomb response elements mediate the formation of chromosome higher-order structures in the bithorax complex

Lanzuolo, C., Roure, V., Dekker, J., Bantignies, F., & Orlando, V. (2007) · Nature Cell Biology · doi:10.1038/ncb1637 · Cited by 289 · see citing works

Biogenesis of Nuclear BodiesPreprint

Dundr, M., & Misteli, T. (2010) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a000711 · Cited by 274 · see citing works

The pluripotency factor Oct4 interacts with Ctcf and also controls X-chromosome pairing and counting

Donohoe, M. E., Silva, S. S., Pinter, S. F., Xu, N., & Lee, J. T. (2009) · Nature · doi:10.1038/nature08098 · Cited by 273 · see citing works

The three-dimensional folding of the α-globin gene domain reveals formation of chromatin globules

Baù, D., Sanyal, A., Lajoie, B. R., Capriotti, E., Byron, M., Lawrence, J. B., Dekker, J., & Martı́-Renom, M. A. (2010) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.1936 · Cited by 267 · see citing works

Transcriptional Silencing by Polycomb-Group ProteinsPreprint

Grossniklaus, U., & Paro, R. (2014) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a019331 · Cited by 266 · see citing works

Inheritance of gene density–related higher order chromatin arrangements in normal and tumor cell nuclei

Cremer, M., Küpper, K., Wagler, B., Wizelman, L., Hase, J. V., Weiland, Y., Kreja, L., Diebold, J., Speicher, M. R., & Cremer, T. J. (2003) · The Journal of Cell Biology · doi:10.1083/jcb.200304096 · Cited by 260 · see citing works

The Meaning of Gene Positioning

Takizawa, T., Meaburn, K. J., & Misteli, T. (2008) · Cell · doi:10.1016/j.cell.2008.09.026 · Cited by 257 · see citing works

Transcription-dependent spatial arrangements of CFTR and adjacent genes in human cell nuclei

Zink, D., Amaral, M. D., Englmann, A., Lang, S. M., Clarke, L. A., Rudolph, C., Alt, F., Luther, K., Braz, C., Sadoni, N., et al. (2004) · The Journal of Cell Biology · doi:10.1083/jcb.200404107 · Cited by 257 · see citing works

Upregulation of c- MYC in cis through a Large Chromatin Loop Linked to a Cancer Risk-Associated Single-Nucleotide Polymorphism in Colorectal Cancer Cells

Wright, J. B., Brown, S. J., & Cole, M. D. (2010) · Molecular and Cellular Biology · doi:10.1128/mcb.01384-09 · Cited by 255 · see citing works

Long-range chromosomal interactions regulate the timing of the transition between poised and active gene expression

Vernimmen, D., Gobbi, M. D., Sloane‐Stanley, J. A., Wood, W. G., & Higgs, D. R. (2007) · The EMBO Journal · doi:10.1038/sj.emboj.7601654 · Cited by 244 · see citing works

Mediation of CTCF transcriptional insulation by DEAD-box RNA-binding protein p68 and steroid receptor RNA activator SRAPreprint

Yao, H., Brick, K., Evrard, Y. A., Xiao, T., Camerini‐Otero, R. D., & Felsenfeld, G. (2010) · Genes & Development · doi:10.1101/gad.1967810 · Cited by 237 · see citing works

Clustering of yeast tRNA genes is mediated by specific association of condensin with tRNA gene transcription complexesPreprint

Haeusler, R. A., Pratt-Hyatt, M., Good, P. D., Gipson, T. A., & Engelke, D. R. (2008) · Genes & Development · doi:10.1101/gad.1675908 · Cited by 221 · see citing works

Higher-order Genome Organization in Human DiseasePreprint

Misteli, T. (2010) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a000794 · Cited by 217 · see citing works

Genomics tools for unraveling chromosome architecture

van Steensel, B., & Dekker, J. (2010) · Nature Biotechnology · doi:10.1038/nbt.1680 · Cited by 216 · see citing works

The spatial dynamics of tissue-specific promoters during C. elegans developmentPreprint

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The Nuclear Topography of ABL, BCR, PML, and RAR Genes: Evidence for Gene Proximity in Specific Phases of the Cell Cycle and Stages of Hematopoietic Differentiation

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