You Are What You Host: Microbiome Modulation of the Aging Process
Open accessAbstract
The critical impact that microbiota have on health and disease makes the interaction between host and microbiome increasingly important as we evaluate therapeutics. Here, we highlight growing evidence that, beyond disease, microbes also affect the most fundamental of host physiological phenotypes, the rate of aging itself.
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The gut microbial ecosystem changes with aging, with Bifidobacteria decreasing and facultative anaerobes such as Streptococci, Staphylococci, Enterococci and Enterobacteria increasing.
“The microbial composition and diversity of the gut ecosystem changes with aging [10], as Bifidobacteria have been reported to decrease [11], while facultative anaerobes, including Streptococci, Staphylococci, Enterococci and Enterobacteria, increase with age [12]”
From Aging of the immune system: Focus on inflammation and vaccination (2016) · cites this paper as [10]
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An obesity-associated gut microbiome with increased capacity for energy harvest
Turnbaugh, P. J., Ley, R. E., Mahowald, M. A., Magrini, V., Mardis, E. R., & Gordon, J. I. (2006) · Nature · doi:10.1038/nature05414 · Cited by 12,444 · cited 1× · see citing works
“Transplanting microbiota from genetically obese ob/ob mice into germ-free lean C57BL/6J mice induces obesity in the recipients compared to controls despite similar caloric intake (Turnbaugh et al., 2006), suggesting that their ability to glean nutrients is affected by themicrobes.”
BackgroundHuman gut microbiome viewed across age and geography
Yatsunenko, T., Rey, F. E., Manary, M. J., Trehan, I., Dominguez-Bello, M. G., Contreras, M., Magris, M., Hidalgo, G., Baldassano, R. N., Anokhin, A. P., et al. (2012) · Nature · doi:10.1038/nature11053 · Cited by 7,815 · cited 1× · see citing works
“As humans age, the composition of our microbiome changes (Yatsunenko et al., 2012).”
BackgroundHost-gut microbiota metabolic interactions
Nicholson, J. K., Holmes, E., Kinross, J., Burcelin, R., Gibson, G., Jia, W., & Pettersson, S. (2012) · Science · doi:10.1126/science.1223813 · Cited by 4,760 · cited 1× · see citing works
“Commensal bacteria can affect the nutrient landscape of the host—the majority of metabolites in human plasma are microbe-derived (Nicholson et al., 2012)—but recent work suggests that bacterial-derived metabolites can affect host longevity.”
BackgroundThe human microbiome: at the interface of health and disease
Cho, I., & Blaser, M. J. (2012) · Nature Reviews Genetics · doi:10.1038/nrg3182 · Cited by 3,449 · cited 4× · see citing works
“Despite coevolving in the presence of this ‘‘microbiome’’ for 500million years (Cho and Blaser, 2012), only recently have advances in sequencing technology allowed us to appreciate the complexities of this relationship and the manner by which genomes within metaorganisms interact and affect one…”
BackgroundInfluentialKenyon, C. J. (2010) · Nature · doi:10.1038/nature08980 · Cited by 2,739 · cited 15× · see citing works
“Unlike worms, the effect of associated bacteria on Drosophila lifespan is less clear and may depend upon the precise composition of the microbiota population.”
BackgroundInfluentialMetformin improves healthspan and lifespan in mice
Martin-Montalvo, A., Mercken, E. M., Mitchell, S. J., Palacios, H. H., Mote, P. L., Scheibye-Knudsen, M., Gomes, A. P., Ward, T. M., Minor, R. K., Blouin, M.-J., et al. (2013) · Nature Communications · doi:10.1038/ncomms3192 · Cited by 1,445 · see citing works
Zhang, L., Hou, D., Chen, X., Li, D., Zhu, L., Zhang, Y., Li, J., Bian, Z., Liang, X., Cai, X., et al. (2012) · Cell Research · doi:10.1038/cr.2011.158 · Cited by 1,216 · cited 1× · see citing works
“However, microRNAs derived from plants are present in human and rodent serum and tissues (Zhang et al., 2012), suggesting such interspecies communication is feasible.”
BackgroundMetformin retards aging in C. elegans by altering microbial folate and methionine metabolism
Cabreiro, F., Au, C., Leung, K.-Y., Vergara-Irigaray, N., Cochemé, H. M., Noori, T., Weinkove, D., Schuster, E., Greene, N. D. E., & Gems, D. (2013) · Cell · doi:10.1016/j.cell.2013.02.035 · Cited by 967 · cited 2× · see citing works
“Metformin increases lifespan in rodents (Martin-Montalvo et al., , January 30, 2014 ª2014 Elsevier Inc. 409 2013), and a side effect of metformin treatment in humans is reduced folate levels (Cabreiro et al., 2013).”
BackgroundStorelli, G., Defaye, A., Erkoşar, B., Pascal Hols, A., Royet, J., & Leulier, F. (2011) · Cell Metabolism · doi:10.1016/j.cmet.2011.07.012 · Cited by 804 · cited 2× · see citing works
“Flies overexpressing the inhibitor of TOR complex 1 are resistant to the effects of L. plantarum on growth (Storelli et al., 2011).”
BackgroundPGRP-SC2 Promotes Gut Immune Homeostasis to Limit Commensal Dysbiosis and Extend Lifespan
Guo, L., Karpac, J., Tran, S. L., & Jasper, H. (2014) · Cell · doi:10.1016/j.cell.2013.12.018 · Cited by 463 · see citing works
Rictor/TORC2 regulates fat metabolism, feeding, growth, and life span in Caenorhabditis elegansPreprint
Soukas, A. A., Kane, E., Carr, C. E., Melo, J. A. T., & Ruvkun, G. (2009) · Genes & Development · doi:10.1101/gad.1775409 · Cited by 410 · cited 1× · see citing works
“Rictor mutants are short lived when cultured on standard B-derived OP50 bacteria, yet when grown on the K12derived E. coli HT115, they are long lived by 76% (Soukas et al., 2009).”
BackgroundIncreased Internal and External Bacterial Load during Drosophila Aging without Life-Span Trade-Off
Ren, C., Webster, P. C., Finkel, S. E., & Tower, J. (2007) · Cell Metabolism · doi:10.1016/j.cmet.2007.06.006 · Cited by 363 · cited 4× · see citing works
“Invertebrate model systems such as the fruit fly Drosophila melanogaster and the nematode worm Caenorhabditis elegans (C. elegans) also live in the presence of microbiota both in nature and in the laboratory (Ren et al., 2007; Zhang and Hou, 2013).”
BackgroundMethodInfluentialDrosophila lifespan enhancement by exogenous bacteria
Brummel, T., Ching, A., Seroude, L., Simon, A. F., & Benzer, S. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0405207101 · Cited by 320 · cited 1× · see citing works
“Early reports suggested that culturing Drosophila axenically shortened lifespan, with the presence of bacteria within the first week of adult life slowing aging (Brummel et al., 2004).”
BackgroundDiet-Induced Developmental Acceleration Independent of TOR and Insulin in C. elegans
MacNeil, L. T., Watson, E. V., Arda, H. E., Zhu, L. J., & Walhout, A. J. M. (2013) · Cell · doi:10.1016/j.cell.2013.02.049 · Cited by 309 · cited 1× · see citing works
“Interestingly, worms are acutely sensitive to signals emanating from DA1877; diluting OP50 with only 0.1% DA1877 still suppressed the reporter and induced similar transcriptional responses to DA1877 alone (MacNeil et al., 2013).”
BackgroundInfluentialThe Influence of Bacterial Diet on Fat Storage in C. elegans
Brooks, K. K., Liang, B., & Watts, J. L. (2009) · PLoS ONE · doi:10.1371/journal.pone.0007545 · Cited by 293 · cited 2× · see citing works
“This effect on worm lipid composition is abolished in animals lacking the peptide transporter PEPT-1 (Brooks et al., 2009).”
BackgroundDiffusible signals and interspecies communication in bacteria
Ryan, R. P., & Dow, J. M. (2008) · Microbiology · doi:10.1099/mic.0.2008/017871-0 · Cited by 284 · cited 1× · see citing works
“Direct Interspecies Signaling and Aging Given the proximity of microbes and host within the metaorganism, diffusible molecules originating in bacteria can directly affect cells in the host (Ryan and Dow, 2008).”
BackgroundThe Snell dwarf mutation Pit1dw can increase life span in mice
Flurkey, K., Papaconstantinou, J., & Harrison, D. E. (2002) · Mechanisms of Ageing and Development · doi:10.1016/s0047-6374(01)00339-6 · Cited by 218 · cited 1× · see citing works
“Snell dwarfmice, deficient in thyroid hormone, are long lived by up to 50%, yet decades earlier, thesemice were touted as a model of rapid aging and progeria (Flurkey et al., 2002).”
BackgroundHouthoofd, K., Braeckman, B. P., Lenaerts, I., Brys, K., Vreese, A. D., Eygen, S. V., & Vanfleteren, J. R. (2002) · Experimental Gerontology · doi:10.1016/s0531-5565(02)00173-0 · Cited by 211 · cited 1× · see citing works
“Culturing worms axenically robustly increases their lifespan (Houthoofd et al., 2002).”
BackgroundBacterial Nitric Oxide Extends the Lifespan of C. elegans
Gusarov, I., Gautier, L., Смоленцева, О. А., Shamovsky, I., Eremina, S. Y., Mironov, A. S., & Nudler, E. (2013) · Cell · doi:10.1016/j.cell.2012.12.043 · Cited by 194 · cited 1× · see citing works
“As a critical signaling molecule, NO has been implicated in multiple functions, including neurotransmission, immunity, and cardiovascular function (Gusarov et al., 2013).”
BackgroundIntegration of metabolic and gene regulatory networks modulates the C. elegans dietary response
Watson, E., MacNeil, L. T., Arda, H. E., Zhu, L. J., & Walhout, A. J. M. (2013) · Cell · doi:10.1016/j.cell.2013.02.050 · Cited by 134 · cited 1× · see citing works
“Hence, DA1877 can induce whole-scale metabolic responses in the worm to modulate development and aging (Watson et al., 2013) (Figure 1D).”
BackgroundEscherichia coli noncoding RNAs can affect gene expression and physiology of Caenorhabditis elegans
Liu, H., Wang, X., Wang, H., Wu, J., Ren, J., Meng, L., Wu, Q., Dong, H., Wu, J., Kao, T., et al. (2012) · Nature Communications · doi:10.1038/ncomms2071 · Cited by 133 · cited 3× · see citing works
“Feeding E. coli expressing a double-stranded C. elegans RNA sequence efficiently suppresses the worm gene (Liu et al., 2012).”
BackgroundInfluentialAdaptive Capacity to Bacterial Diet Modulates Aging in C. elegans
Pang, S., & Curran, S. P. (2014) · Cell Metabolism · doi:10.1016/j.cmet.2013.12.005 · Cited by 132 · see citing works
Excessive folate synthesis limits lifespan in the C. elegans: E. coliaging model
Virk, B., Correia, G. D. S., Dixon, D. P., Feyst, I., Jia, J., Oberleitner, N., Briggs, Z., Hodge, E., Edwards, R., Ward, J. M., et al. (2012) · BMC Biology · doi:10.1186/1741-7007-10-67 · Cited by 123 · cited 1× · see citing works
“Metformin suppresses folate metabolism specifically in E. coli, and feeding worms either the antibiotic trimethoprim, which inhibits dihydrofolate reductase in bacteria, or E. coli mutants with suppressed folate metabolism (Virk et al., 2012) also increases lifespan.”
BackgroundMetabolic Regulation of Stem Cell Behavior and Implications for Aging
Jasper, H., & Jones, D. L. (2010) · Cell Metabolism · doi:10.1016/j.cmet.2010.11.010 · Cited by 56 · cited 1× · see citing works
“Tipping the balance toward quiescence limits intestinal rejuvenation, whereas ISC overproliferation causes epithelial dysplasia (Jasper and Jones, 2010).”
BackgroundHost-Microbe Interactions inCaenorhabditis elegans
Zhang, R., & Hou, A. (2013) · ISRN Microbiology · doi:10.1155/2013/356451 · Cited by 53 · cited 2× · see citing works
“Invertebrate model systems such as the fruit fly Drosophila melanogaster and the nematode worm Caenorhabditis elegans (C. elegans) also live in the presence of microbiota both in nature and in the laboratory (Ren et al., 2007; Zhang and Hou, 2013).”
Background
Flagged first, then by citations
Research works printed but not linked: 2
- Guo L Jasper H 2013 Cell In Press
- Martin-Montalvo A Mercken EM Mitchell SJ Palacios HH Mote PL Scheibye-Knudsen M Gomes AP Ward TM Minor RK Blouin MJ 2013 Nat Commun 4 2192 23900241 PMC3736576
Cited by
Sorted by citations
Geroscience: Linking Aging to Chronic Disease
Kennedy, B. K., Berger, S. L., Brunet, A., Campisi, J., Cuervo, A. M., Epel, E. S., Franceschi, C., Lithgow, G. J., Morimoto, R. I., Pessin, J. E., et al. (2014) · Cell · doi:10.1016/j.cell.2014.10.039 · Cited by 2,764 · see citing works
Autophagy as a promoter of longevity: insights from model organisms
Hansen, M., Rubinsztein, D. C., & Walker, D. W. (2018) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-018-0033-y · Cited by 754 · see citing works
Sofroniew, M. V. (2015) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a020420 · Cited by 695 · see citing works
“The potential impact of concurrent low-grade infections, or even of microbiome (Heintz and Mair 2014), on astrogliosis and responses to CNS insults is likely to be an interesting area of future research.”
BackgroundSleep Loss Can Cause Death through Accumulation of Reactive Oxygen Species in the Gut
Vaccaro, A., Kaplan Dor, Y., Nambara, K., Pollina, E. A., Lin, C., Greenberg, M. E., & Rogulja, D. (2020) · Cell · doi:10.1016/j.cell.2020.04.049 · Cited by 541 · see citing works
Clark, R. I., Salazar, A., Yamada, R., Fitz-Gibbon, S., Morselli, M., Alcaraz, J., Rana, A., Rera, M., Pellegrini, M., Ja, W. W., et al. (2015) · Cell Reports · doi:10.1016/j.celrep.2015.08.004 · Cited by 510 · see citing works
AMPK at the Nexus of Energetics and Aging
Burkewitz, K., Zhang, Y., & Mair, W. B. (2014) · Cell Metabolism · doi:10.1016/j.cmet.2014.03.002 · Cited by 483 · see citing works
“Whether the effect of metformin on aging in other species also functions via the microbiome is an area worthy of exploration (Heintz and Mair, 2014).”
BackgroundSelf-citationColston, T. J., & Jackson, C. R. (2016) · Molecular Ecology · doi:10.1111/mec.13730 · Cited by 508 · see citing works
“As humans age, decreased immunity and other physiological changes may be related to shifts in the microbiome (Heintz & Mair 2014).”
BackgroundAging of the immune system: Focus on inflammation and vaccination
Pinti, M., Appay, V., Campisi, J., Frasca, D., Fülöp, T., Sauce, D., Larbi, A., Weinberger, B., & Cossarizza, A. (2016) · European Journal of Immunology · doi:10.1002/eji.201546178 · Cited by 439 · see citing works
Aging and the immune system: An overview
Akha, A. A. S. (2018) · Journal of Immunological Methods · doi:10.1016/j.jim.2018.08.005 · Cited by 389 · see citing works
Zhao, Y., Jaber, V., & Lukiw, W. J. (2017) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2017.00318 · Cited by 379 · see citing works
“The vast proportion of all GI tract microbiota consists of anaerobic or facultative anaerobic bacteria (Bhattacharjee and Lukiw, 2013; Heintz and Mair, 2014; Köhler et al., 2016; Lloyd-Price et al., 2016).”
BackgroundTryptophan Metabolism in Inflammaging: From Biomarker to Therapeutic Target
Sorgdrager, F. J. H., Naudé, P. J. W., Kema, I. P., Nollen, E. A. A., & Deyn, P. P. D. (2019) · Frontiers in Immunology · doi:10.3389/fimmu.2019.02565 · Cited by 372 · see citing works
“Indoles in Gastro-Intestinal and Metabolic Functioning The microbiome is increasingly recognized to play an important role in aging and age-related disease (71).”
BackgroundAlzheimer’s disease and gut microbiota
Hu, X., Wang, T., & Jin, F. (2016) · Science China Life Sciences · doi:10.1007/s11427-016-5083-9 · Cited by 371 · see citing works
Inflammaging decreases adaptive and innate immune responses in mice and humans
Frasca, D., & Blomberg, B. B. (2016) · Biogerontology · doi:10.1007/s10522-015-9578-8 · Cited by 357 · see citing works
“It has been shown that the microbial composition and diversity of the gut ecosystem of elderly individuals is different from that of younger controls (Heintz and Mair 2014).”
Thomas, S., Izard, J., Walsh, E. K., Batich, K. A., Chongsathidkiet, P., Clarke, G. A., Sela, D. A., Muller, A. J., Mullin, J. M., Albert, K., et al. (2017) · Cancer Research · doi:10.1158/0008-5472.can-16-2929 · Cited by 369 · see citing works
“change host physiology, as it pertains to these parameters (139).”
BackgroundFunctional Soil Microbiome: Belowground Solutions to an Aboveground Problem
Lakshmanan, V., Selvaraj, G., & Bais, H. P. (2014) · Plant Physiology · doi:10.1104/pp.114.245811 · Cited by 400 · see citing works
Microbial Genetic Composition Tunes Host Longevity
Han, B., Sivaramakrishnan, P., Lin, C.-C., Neve, I. A. A., He, J., Tay, L. W. R., Sowa, J. N., Sizovs, A., Du, G., Wang, J., et al. (2017) · Cell · doi:10.1016/j.cell.2017.05.036 · Cited by 349 · see citing works
“A growing body of evidence suggests that gut microbiota— diverse microorganisms inhabiting the digestive track—are tightly linked to the aging process of their host (Cho and Blaser, 2012; Heintz and Mair, 2014).”
Mechanisms of Molecular Mimicry Involving the Microbiota in Neurodegeneration
Friedland, R. P. (2015) · Journal of Alzheimer's Disease · doi:10.3233/jad-142841 · Cited by 338 · see citing works
“liver disorders, and other conditions [43, 44].”
The Microbiota and Microbiome in Aging: Potential Implications in Health and Age‐Related Diseases
Zapata, H. J., & Quagliarello, V. J. (2015) · Journal of the American Geriatrics Society · doi:10.1111/jgs.13310 · Cited by 279 · see citing works
Iatsenko, I., Boquete, J., & Lemaître, B. (2018) · Immunity · doi:10.1016/j.immuni.2018.09.017 · Cited by 240 · see citing works
Pan, F., Zhang, L., Li, M., Hu, Y., Zeng, B., Yuan, H., Zhao, L., & Zhang, C. (2018) · Microbiome · doi:10.1186/s40168-018-0440-5 · Cited by 237 · see citing works
“gut microbiota is tightly linked to the health and even the ageing process of their host [33, 34].”
BackgroundMarine Animal Microbiomes: Toward Understanding Host–Microbiome Interactions in a Changing Ocean
Apprill, A. M. (2017) · Frontiers in Marine Science · doi:10.3389/fmars.2017.00222 · Cited by 234 · see citing works
“In non-marine animals, these factors have been shown to cause alterations in animalmicrobial relationships (e.g., Heintz and Mair, 2014).”
BackgroundCausal roles of mitochondrial dynamics in longevity and healthy aging
Sharma, A., Smith, H. J., Yao, P., & Mair, W. B. (2019) · EMBO Reports · doi:10.15252/embr.201948395 · Cited by 214 · see citing works
“Microbiome modulates host aging through various direct and indirect signaling mechanisms [202].”
Self-citationBana, B., & Cabreiro, F. (2019) · Annual Review of Genetics · doi:10.1146/annurev-genet-112618-043650 · Cited by 207 · see citing works
Life history and eco‐evolutionary dynamics in light of the gut microbiota
Macke, E., Tasiemski, A., Massol, F., Callens, M., & Decaestecker, E. (2016) · Oikos · doi:10.1111/oik.03900 · Cited by 193 · see citing works
Mathematical Modeling of Microbial Community Dynamics: A Methodological Review
Song, H., Cannon, W. R., Beliaev, A. S., & Konopka, A. E. (2014) · Processes · doi:10.3390/pr2040711 · Cited by 186 · see citing works
“With approximately 16 million humans dying from infectious diseases each year [2], there is an increasing appreciation for the role of the “human microbiome” in conditions ranging from metabolic diseases [3], aging [4], and central nervous system disorders [5].”
BackgroundGut Dysbiosis and Muscle Aging: Searching for Novel Targets against Sarcopenia
Picca, A., Fanelli, F., Calvani, R., Mulè, G., Pesce, V., Sisto, A., Pantanelli, C., Bernabei, R., Landi, F., & Marzetti, E. (2018) · Mediators of Inflammation · doi:10.1155/2018/7026198 · Cited by 181 · see citing works
“A growing body of evidence suggests that the innumerable microorganisms that populate the mammalian gastrointestinal tract (gut microbiota) are tightly linked to the aging process of their host [5, 6].”
BackgroundMicrobiota-gut brain axis involvement in neuropsychiatric disorders
Iannone, L. F., Preda, A., Blottière, H. M., Clarke, G., Albani, D., Belcastro, V., Carotenuto, M., Cattaneo, A., Citraro, R., Ferraris, C., et al. (2019) · Expert Review of Neurotherapeutics · doi:10.1080/14737175.2019.1638763 · Cited by 177 · see citing works
“Finally, diet is also one of the major factors influencing the gut microbiota composition and metabolism, contributing to host homeostasis and disease susceptibility [147]; therefore, it is extremely important to understand how diet can influence the gut microbiota, and while it is clear that what we eat is”
BackgroundGastro-Intestinal and Oral Microbiome Signatures Associated with Healthy Aging
Singh, H., Torralba, M. G., Moncera, K. J., DiLello, L., Petrini, J., Nelson, K. E., & Pieper, R. (2019) · GeroScience · doi:10.1007/s11357-019-00098-8 · Cited by 158 · see citing works
Miller, G. E., Engen, P. A., Gillevet, P. M., Shaikh, M. W., Sikaroodi, M., Forsyth, C. B., Mutlu, E., & Keshavarzian, A. (2016) · PLoS ONE · doi:10.1371/journal.pone.0148952 · Cited by 166 · see citing works
Pathogenic microbes, the microbiome, and Alzheimer’s disease (AD)
Hill, J. M., Clément, C., Pogue, A. I., Bhattacharjee, S., Zhao, Y., & Lukiw, W. J. (2014) · Frontiers in Aging Neuroscience · doi:10.3389/fnagi.2014.00127 · Cited by 169 · see citing works
“OPINION ARTICLE published: 16 June 2014 doi: 10.3389/fnagi.2014.00127”
BackgroundInfluentialPoor cognitive ageing: Vulnerabilities, mechanisms and the impact of nutritional interventions
Miquel, S., Champ, C., Day, J. E. L., Aarts, E., Bahr, B. A., Bakker, M. J., Bánáti, D., Calabrese, V., Cederholm, T., Cryan, J. F., et al. (2017) · Ageing Research Reviews · doi:10.1016/j.arr.2017.12.004 · Cited by 163 · see citing works
“This relationship is indirectly mediated by the impact of metformin on bacterial folate metabolism (Heintz and Mair, 2014).”
Zhang, X., Sukhchuluun, G., Bo, T., Chi, Q., Yang, J., Chen, B., Zhang, L., & Wang, D. (2018) · Microbiome · doi:10.1186/s40168-018-0473-9 · Cited by 158 · see citing works
“Conversely, gut microbiota, by way of their metabolites and bacterial polysaccharides, can influence host energy metabolism [26, 27], behavior [28, 29], inflammation and immunity [30–32], homeostasis of enteric and central nervous systems [33–35], and aging [36, 37].”
BackgroundElucidation of complexity and prediction of interactions in microbial communities
Zúñiga, C., Zaramela, L. S., & Zengler, K. (2017) · Microbial Biotechnology · doi:10.1111/1751-7915.12855 · Cited by 152 · see citing works
“Two recent micro-biome studies have made progress towards drafting a generalized human diet in the context of ageing and human longevity (Heintz and Mair, 2014; Shoaie et al. , 2015).”
BackgroundWu, Y., Du, S., Johnson, J. L., Tung, H.-Y., Landers, C. T., Liu, Y., Seman, B. G., Wheeler, R. T., Costa-Mattioli, M., Kheradmand, F., et al. (2019) · Nature Communications · doi:10.1038/s41467-018-07991-4 · Cited by 143 · see citing works
Microbial Sources of Amyloid and Relevance to Amyloidogenesis and Alzheimer’s Disease (AD)
P, Z. Y. D. (2015) · Journal of Alzheimer’s Disease & Parkinsonism · doi:10.4172/2161-0460.1000177 · Cited by 137 · see citing works
Cancer and Aging - the Inflammatory Connection
Zinger, A., Cho, W. C. S., & Ben‐Yehuda, A. (2017) · Aging and Disease · doi:10.14336/ad.2016.1230 · Cited by 137 · see citing works
Fusobacterium and Colorectal Cancer
Zhou, Z., Chen, J., Yao, H., & Hu, H. (2018) · Frontiers in Oncology · doi:10.3389/fonc.2018.00371 · Cited by 137 · see citing works
Siddharth, J., Chakrabarti, A., Pannérec, A., Karaz, S., Morin-Rivron, D., Masoodi, M., Feige, J. N., & Parkinson, S. J. (2017) · Aging · doi:10.18632/aging.101262 · Cited by 127 · see citing works
“The microbiome has been implicated in several aspects associated with aging including rate of aging [15], inflammation [16], immunity [17], and muscle status [18].”
Xiao, R., Chun, L., Ronan, E. A., Friedman, D. I., Liu, J., & Xu, X. Z. S. (2015) · Cell Reports · doi:10.1016/j.celrep.2015.04.024 · Cited by 125 · see citing works
“Many other factors may contribute, including but not limited to sensory perception, behavioral regulation, and pathogenicity (Heintz and Mair, 2014).”
BackgroundThe Impact of Immunosenescence on Pulmonary Disease
Murray, M., & Chotirmall, S. H. (2015) · Mediators of Inflammation · doi:10.1155/2015/692546 · Cited by 124 · see citing works
“The microbes interact with host transcriptional pathways and regulate across both species and their host by employing RNA and microRNA signalling mechanisms [118, 119].”
Bloemendaal, M., Szopinska-Tokov, J., Belzer, C., Boverhoff, D., Papalini, S., Michels, F., van Hemert, S., Arias Vasquez, A., & Aarts, E. (2021) · Translational Psychiatry · doi:10.1038/s41398-021-01404-9 · Cited by 118 · see citing works
Obata, F., Fons, C., & Gould, A. P. (2018) · Nature Communications · doi:10.1038/s41467-018-03070-w · Cited by 114 · see citing works
Constraint-based stoichiometric modelling from single organisms to microbial communities
Gottstein, W., Olivier, B. G., Bruggeman, F. J., & Teusink, B. (2016) · Journal of The Royal Society Interface · doi:10.1098/rsif.2016.0627 · Cited by 109 · see citing works
“Microbial communities are ubiquitous and of great interest for biotechnological applications [1,2], health [3–6], food production [7] and environmental studies [8].”
BackgroundRole of gut microbiota in aging-related health decline: insights from invertebrate models
Clark, R. I., & Walker, D. W. (2017) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-017-2671-1 · Cited by 116 · see citing works
“A number of additional studies have demonstrated that diffusible molecules originating in bacteria can impact worm life span [81].”
BackgroundMicrobial metabolites regulate host lipid metabolism through NR5A–Hedgehog signalling
Lin, C.-C., & Wang, M. C. (2017) · Nature Cell Biology · doi:10.1038/ncb3515 · Cited by 111 · see citing works
Aging and serum MCP-1 are associated with gut microbiome composition in a murine model
Conley, M. N., Wong, C. P., Duyck, K. M., Hord, N. G., Ho, E., & Sharpton, T. J. (2016) · PeerJ · doi:10.7717/peerj.1854 · Cited by 108 · see citing works
Yang, X., Diling, C., Yang, J. T., Ting, L., Guoyan, H., Hualun, L., Xiaocui, T., Lai, G., Shuai, O., Chaoqun, Z., et al. (2018) · Frontiers in Neurology · doi:10.3389/fneur.2018.00412 · Cited by 108 · see citing works
Impact of Melatonin on Skeletal Muscle and Exercise
Stacchiotti, A., Favero, G., & Rodella, L. F. (2020) · Cells · doi:10.3390/cells9020288 · Cited by 115 · see citing works
de Souza, A. Z. Z., Zambom, A. Z., Abboud, K. Y., Reis, S. K., Tannihão, F., Guadagnini, D., Saad, M. J. A., & Prada, P. O. (2015) · Nutrition · doi:10.1016/j.nut.2015.01.004 · Cited by 99 · see citing works
Periodontitis, Microbiomes and their Role in Alzheimer’s Disease
Pritchard, A. B., Crean, S., Olsen, I., & Singhrao, S. K. (2017) · Frontiers in Aging Neuroscience · doi:10.3389/fnagi.2017.00336 · Cited by 97 · see citing works
“The diversity of microbes documented could be a reflection of the brain donor’s geographical location, their age, diet, oral function (denture wearing) and lifestyle (Yatsunenko et al., 2012; Lukiw, 2013; Danborg et al., 2014; Heintz and Mair, 2014).”
Wu, L. H., Zeng, T., Deligios, M., Milanesi, L., Langille, M. G. I., Zinellu, A., Rubino, S., Carru, C., & Kelvin, D. J. (2020) · mSphere · doi:10.1128/msphere.00558-19 · Cited by 95 · see citing works
“Moreover, the microbiota also can modulate the aging process (18).”
BackgroundRapamycin modulates tissue aging and lifespan independently of the gut microbiota in Drosophila
Schinaman, J. M., Rana, A., Ja, W. W., Clark, R. I., & Walker, D. W. (2019) · Scientific Reports · doi:10.1038/s41598-019-44106-5 · Cited by 95 · see citing works
Folate Acts in E. coli to Accelerate C. elegans Aging Independently of Bacterial Biosynthesis
Virk, B., Jia, J., Maynard, C., Raimundo, A., Lefebvre, J., Richards, S. A., Chetina, N., Liang, Y., Helliwell, N., Cipinska, M., et al. (2016) · Cell Reports · doi:10.1016/j.celrep.2016.01.051 · Cited by 92 · see citing works
Microbiome diurnal rhythmicity and its impact on host physiology and disease risk
Nobs, S. P., Tuganbaev, T., & Elinav, E. (2019) · EMBO Reports · doi:10.15252/embr.201847129 · Cited by 90 · see citing works
Metaproteomics: A strategy to study the taxonomy and functionality of the gut microbiota
Wang, Y., Zhou, Y., Xiao, X., Zheng, J., & Zhou, H. (2020) · Journal of Proteomics · doi:10.1016/j.jprot.2020.103737 · Cited by 90 · see citing works
Opportunities for organoids as new models of aging
Hu, J. L., Todhunter, M. E., LaBarge, M. A., & Gartner, Z. J. (2017) · The Journal of Cell Biology · doi:10.1083/jcb.201709054 · Cited by 88 · see citing works
“They would be well-suited to studying the aging microbiome and age-related susceptibility to disease caused by ordinarily asymptomatic microbes, such as Clostridium difficile (Htwe et al., 2007; Heintz and Mair, 2014).”
BackgroundJaniak, M. C., Montague, M. J., Villamil, C. I., Stock, M. K., Trujillo, A. E., DePasquale, A. N., Orkin, J. D., Bauman, S. E., González, O., Platt, M. L., et al. (2021) · Microbiome · doi:10.1186/s40168-021-01009-w · Cited by 79 · see citing works
Regulation of MicroRNA Machinery and Development by Interspecies S-Nitrosylation
Seth, P., Hsieh, P. N., Jamal, S., Wang, L., Gygi, S. P., Jain, M. K., Coller, J. M., & Stamler, J. S. (2019) · Cell · doi:10.1016/j.cell.2019.01.037 · Cited by 81 · see citing works
Antiaging effects of bioactive molecules isolated from plants and fungi
Martel, J., Ojcius, D. M., Ko, Y., Chang, C., & Young, J. D. (2019) · Medicinal Research Reviews · doi:10.1002/med.21559 · Cited by 79 · see citing works
“The gut microbiota plays a role in many physiological functions(304) and may also influence longevity.(305) A search for bacteria that are beneficial in worms has shown that specific bacterial mutants lacking a single gene can extend lifespan in worms.”
BackgroundPrimate microbiomes over time: Longitudinal answers to standing questions in microbiome research
Björk, J. R., Dasari, M. R., Grieneisen, L., & Archie, E. A. (2019) · American Journal of Primatology · doi:10.1002/ajp.22970 · Cited by 74 · see citing works
“…these changes, and (c) whether those declines are reflected in generalizable markers of ecosystem function, such as gut microbiome diversity, composition, resilience, or stability (Biagi, Candela, Fairweather‐Tait, Franceschi, & Brigidi, 2012; Heintz & Mair, 2014; Saraswati & Sitaraman, 2014).”
Gut microbiota and physical frailty through the mediation of sarcopenia
Casati, M., Ferri, E., Azzolino, D., Cesari, M., & Arosio, B. (2019) · Experimental Gerontology · doi:10.1016/j.exger.2019.110639 · Cited by 75 · see citing works
The role of commensal microbes in the lifespan of Drosophila melanogaster
Lee, H., Lee, S., Lee, J.-H., Lee, W., & Min, K. (2019) · Aging · doi:10.18632/aging.102073 · Cited by 75 · see citing works
“elegans through direct, metabolic, or speciesspecific signals [24].”
BackgroundLuan, Z., Sun, G., Huang, Y., Yang, Y., Yang, R., Li, C., Wang, T., Tan, D., Qi, S., Chen, J., et al. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.01474 · Cited by 73 · see citing works
“Studies have shown a positive effect of probiotics on maintenance of health including an anti-aging effect (Heintz and Mair, 2014; Kim et al., 2016).”
BackgroundLorente-Picón, M., & Laguna, A. (2021) · Biomolecules · doi:10.3390/biom11030433 · Cited by 69 · see citing works
Mechanisms Involved in Gut Microbiota Regulation of Skeletal Muscle
Li, G., Jin, B., & Fan, Z. (2022) · Oxidative Medicine and Cellular Longevity · doi:10.1155/2022/2151191 · Cited by 71 · see citing works
“The human gut microbiota is dynamic throughout the life cycle, with the composition of gut microbes tending toward a steady state during the early years, but new research has found that the gut microbiota changes signi fi cantly in older adults ( ≥ 65 years) [25].”
Hakim, J. A., Koo, H., Dennis‐Cornelius, L. N., Kumar, R., Ptacek, T., Morrow, C. D., Lefkowitz, E. J., Powell, M. L., Bej, A. K., & Watts, S. A. (2015) · Frontiers in Microbiology · doi:10.3389/fmicb.2015.01047 · Cited by 63 · see citing works
“…growth, development, metabolism, and digestive physiology of the host, as well as protection from predators, and adaptive fitness to the environment they inhabit (Shin et al., 2011; Gomez et al., 2012; Nguyen and Clarke, 2012; Guinane and Cotter, 2013; Kostic et al., 2013; Heintz and Mair, 2014).”
BackgroundMicroRNAs and the metabolic hallmarks of aging
Victoria, B., López, Y. O. N., & Masternak, M. M. (2017) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2016.12.021 · Cited by 63 · see citing works
“…uthor M anuscript Growing evidence support the existence of a gut microbial–mammalian metabolic axis (Figure 2) and indicate that commensal microbes extend their effects on their host beyond disease to also affect the organismal rate of aging itself (Heintz and Mair, 2014; H. Li and W. Jia, 2013).”
BackgroundVílchez, J. I., Navas, A., González-López, J., Arcos, S. C., & Manzanera, M. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2015.01514 · Cited by 61 · see citing works
“Any lethal or detrimental effect on bacterial metabolism can be interpreted as potentially harmful for soil bacteria and for the human microbiome, and consequently for human health (Gilbert et al., 2013; David et al., 2014; Heintz and Mair, 2014).”
BackgroundLacticaseibacillus rhamnosus Probio-M9 extends the lifespan of Caenorhabditis elegans
Zhang, J., Zhao, Y., Sun, Z., & Sun, T. (2022) · Communications Biology · doi:10.1038/s42003-022-04031-2 · Cited by 60 · see citing works
Regulation of infection efficiency in a globally abundant marine Bacteriodetes virus
Howard‐Varona, C., Roux, S., Doré, H., Solonenko, N., Holmfeldt, K., Markillie, L. M., Orr, G., & Sullivan, M. B. (2016) · The ISME Journal · doi:10.1038/ismej.2016.81 · Cited by 58 · see citing works
“Bacteria are well recognized to impact human health and disease (Heintz and Mair, 2014), industrial processes (Luo et al.”
BackgroundCatic, A. (2018) · Progress in molecular biology and translational science · doi:10.1016/bs.pmbts.2017.12.003 · Cited by 58 · see citing works
Reactive Astrocytes and Emerging Roles in Central Nervous System (CNS) Disorders
Liddelow, S. A., Olsen, M. L., & Sofroniew, M. V. (2024) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a041356 · Cited by 55 · see citing works
Microbiota and mitobiota. Putting an equal sign between mitochondria and bacteria
Zorov, D. B., Plotnikov, E. Y., Silachev, D. N., Zorova, L. D., Pevzner, I. B., Zorov, S. D., Babenko, V. А., Jankauskas, S. S., Popkov, V. A., & Savina, P. S. (2014) · Biochemistry (Moscow) · doi:10.1134/s0006297914100046 · Cited by 56 · see citing works
Téfit, M. A., & Leulier, F. (2017) · Journal of Experimental Biology · doi:10.1242/jeb.151522 · Cited by 56 · see citing works
Chen, Y., Zhang, S., Zeng, B., Zhao, J., Yang, M., Zhang, M., Li, Y., Ni, Q., Wu, D., & Li, Y. (2020) · Aging · doi:10.18632/aging.102872 · Cited by 53 · see citing works
Current Pharmaceutical Aspects of Synthetic Quinoline Derivatives
Tabassum, R., Ashfaq, M. H., & Oku, H. (2020) · Mini-Reviews in Medicinal Chemistry · doi:10.2174/1389557520999201214234735 · Cited by 53 · see citing works
Aging, hematopoiesis, and the myelodysplastic syndromes
Chung, S. S., & Park, C. Y. (2017) · Blood Advances · doi:10.1182/bloodadvances.2017009852 · Cited by 50 · see citing works
“The drive to form myeloid cells may not only arise from exposure to infectious organisms, but may also be due to alterations in the gut and skin microbiome that occur with age, much of which is influenced by modifiable behaviors, such as diet and exercise.(35) Thus, the possible extrinsic selection pressures on HSCs a…”
BackgroundBats Are an Untapped System for Understanding Microbiome Evolution in Mammals
Ingala, M. R., Simmons, N. B., & Perkins, S. L. (2018) · mSphere · doi:10.1128/msphere.00397-18 · Cited by 51 · see citing works
“To date, studies addressing the link between host aging and the microbiome in humans and lab animals have uncovered direct links between microbial metabolic products and life span of the host (54).”
BackgroundNtemiri, A., Chonchúir, F. N., O’Callaghan, T. F., Stanton, C., Ross, R. P., & O’Toole, P. W. (2017) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.6b05434 · Cited by 48 · see citing works
Microbiome assembly and maintenance across the lifespan of bumble bee workers
Hammer, T. J., Easton‐Calabria, A., & Moran, N. A. (2022) · Molecular Ecology · doi:10.1111/mec.16769 · Cited by 50 · see citing works
Assessing the rate of aging to monitor aging itself
Xia, X., Wang, Y., Yu, Z., Chen, J., & Han, J. J. (2021) · Ageing Research Reviews · doi:10.1016/j.arr.2021.101350 · Cited by 46 · see citing works
Xiong, W., Zhao, X., Xu, Q., Wei, G., Zhang, L., Fan, Y., Wen, L., Liu, Y., Zhang, T., Zhang, L., et al. (2021) · Journal of Ethnopharmacology · doi:10.1016/j.jep.2021.114598 · Cited by 42 · see citing works
Chan, J., Wright, J., Wong, H. T., Ardasheva, A., Brumbaugh, J. T., McLimans, C. J., & Lamendella, R. (2019) · Scientific Reports · doi:10.1038/s41598-019-41452-2 · Cited by 39 · see citing works
Franciotti, R., Pignatelli, P., Carrarini, C., Romei, F. M., Mastrippolito, M., Gentile, A., Mancinelli, R., Fulle, S., Piattelli, A., ONOFRJ, M. C., et al. (2021) · Biomolecules · doi:10.3390/biom11060845 · Cited by 40 · see citing works
Microbiome and Longevity: Gut Microbes Send Signals to Host Mitochondria
Gruber, J., & Kennedy, B. K. (2017) · Cell · doi:10.1016/j.cell.2017.05.048 · Cited by 40 · see citing works
Theaflavin-regulated Imd condensates control Drosophila intestinal homeostasis and aging
Cai, Q., Ji, S., Li, M., Zheng, S., Zhou, X., Guo, H., Deng, S., Zhu, J., Li, D., & Xie, Z. (2021) · iScience · doi:10.1016/j.isci.2021.102150 · Cited by 39 · see citing works
Evidence for the Contribution of Gut Microbiota to Age-Related Anabolic Resistance
Watson, M. D., Cross, B. L., & Grosicki, G. J. (2021) · Nutrients · doi:10.3390/nu13020706 · Cited by 39 · see citing works
Noce, A., Canale, M. P., Capria, A., Rovella, V., Tesauro, M., Splendiani, G., Annicchiarico‐Petruzzelli, M., Manzuoli, M., Simonetti, G., & Daniele, N. D. (2015) · Aging · doi:10.18632/aging.100740 · Cited by 38 · see citing works
“elegans to drosophila or mice where the cell autonomy and the underlying molecular pathways have been deeply investigated [30-39].”
BackgroundMa, T., Yao, C., Shen, X., Jin, H., Guo, Z., Zhai, Q., Yu-Kwok, L., Zhang, H., & Sun, Z. (2021) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-021-11625-z · Cited by 39 · see citing works
Maintaining gut ecosystems for health: Are transitory food bugs stowaways or part of the crew?
Plé, C., Breton, J., Daniel, C., & Foligné, B. (2015) · International Journal of Food Microbiology · doi:10.1016/j.ijfoodmicro.2015.03.015 · Cited by 37 · see citing works
“But perhaps the more relevant statement has now become, “You are what you host” (Heintz and Mair, 2014).”
BackgroundThe role of Caenorhabditis elegans in the discovery of natural products for healthy aging
Kirchweger, B., Zwirchmayr, J., Grienke, U., & Rollinger, J. M. (2023) · Natural Product Reports · doi:10.1039/d3np00021d · Cited by 40 · see citing works
Transdermal Delivery of Living and Biofunctional Probiotics through Dissolvable Microneedle Patches
Chen, H., Lin, D. H., Liu, F., Zhou, L., Liu, D., Lin, Z., Yang, C., Jin, Q., Hang, T., He, G., et al. (2018) · ACS Applied Bio Materials · doi:10.1021/acsabm.8b00102 · Cited by 37 · see citing works
Nardelli, C., Granata, I., Nunziato, M., Setaro, M., Carbone, F., Zulli, C., Pilone, V., Capoluongo, E. D., Palma, G. D. D., Corcione, F., et al. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms221910747 · Cited by 36 · see citing works
‘Inside Out’– a dialogue between mitochondria and bacteria
Han, B., Lin, C.-C., Hu, G., & Wang, M. C. (2018) · FEBS Journal · doi:10.1111/febs.14692 · Cited by 35 · see citing works
Genetics and Pharmacology of Longevity
Castillo-Quan, J. I., Kinghorn, K. J., & Bjedov, I. (2015) · Advances in genetics · doi:10.1016/bs.adgen.2015.06.002 · Cited by 37 · see citing works
Crowe, J., Lumb, F. E., Doonan, J., Broussard, M., Tarafdar, A., Pineda, M. A., Landabaso, C., Mulvey, L., Hoskisson, P. A., Babayan, S. A., et al. (2020) · PLoS Pathogens · doi:10.1371/journal.ppat.1008391 · Cited by 33 · see citing works
Mechanisms for falling urine pH with age in stone formers
Menezes, C. J., Worcester, E. M., Coe, F. L., Asplin, J. R., Bergsland, K. J., & Ko, B. S. (2019) · American Journal of Physiology-Renal Physiology · doi:10.1152/ajprenal.00066.2019 · Cited by 33 · see citing works
Yang, W., Petersen, C., Pees, B., Zimmermann, J., Waschina, S., Dirksen, P., Rosenstiel, P. C., Tholey, A., Leippe, M., Dierking, K., et al. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.01793 · Cited by 32 · see citing works
“, 2012), development (Sampson and Mazmanian, 2015), immune defense (Tilg and Moschen, 2015), and aging (Heintz and Mair, 2014).”
BackgroundRoth‐Walter, F., Adcock, I. M., Benito‐Villalvilla, C., Bianchini, R., Bjermer, L. H., Caramori, G., Cari, L., Chung, K. F., Diamant, Z., Eguíluz‐Gracia, I., et al. (2023) · Allergy · doi:10.1111/all.15977 · Cited by 31 · see citing works
Tian, D., & Han, M. (2022) · Developmental Cell · doi:10.1016/j.devcel.2021.12.016 · Cited by 31 · see citing works
- Authors
- Heintz, C., & Mair, W.
- Affiliations
- Harvard University (US)
- Corresponding author
- Mair, William
- Venue
- Cell
- Publisher
- Elsevier BV
- Published
- 2014-01
- Volume
- 156
- Issue
- 3
- Pages
- 408-411
- ISSN
- 0092-8674 (ISSN-L)
- PMC
- PMC3956044
- OpenAlex
- W2095090113
- Cited by
- 222
- References
- 25
- Citations by year
- 2026: 4 · 2025: 9 · 2024: 15 · 2023: 14 · 2022: 16 · 2021: 23 · 2020: 16 · 2019: 23 · 2018: 24 · 2017: 25 · 2016: 20 · 2015: 21 · 2014: 12
- FWCI
- 8.89
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Cell (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- Ellison Medical Foundation
- National Institute on Aging (R01AG044346)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Aging › Genetics, Aging, and Longevity in Model Organisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Dentistry › Periodontics › Oral microbiology and periodontitis research
- Keywords
- microbiome, aging, host-microbe interactions, microbiota modulation, host physiology, age-related diseases, therapeutics
- MeSH terms
- Aging, Animals, Humans, Longevity, Models, Animal, Metagenome, Microbiota
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