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A Link between RNA Metabolism and Silencing Affecting Arabidopsis Development
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Cites
Bartel (2004) · doi:10.1016/s0092-8674(04)00045-5 · Cited by 34,714
Genome-Wide Insertional Mutagenesis of Arabidopsis thaliana
Alonso, J. M., Stepanova, A. N., Leisse, T. J., Kim, C. J., Chen, H., Shinn, P., Stevenson, D. K., Zimmerman, J., Barajas, P., Cheuk, R., et al. (2003) · Science · doi:10.1126/science.1086391 · Cited by 5,102
Self-citationMicroRNAs AND THEIR REGULATORY ROLES IN PLANTS
Jones-Rhoades, M. W., Bartel, D. P., & Bartel, B. (2006) · Annual Review of Plant Biology · doi:10.1146/annurev.arplant.57.032905.105218 · Cited by 2,686
Baulcombe, D. (2004) · Nature · doi:10.1038/nature02874 · Cited by 2,534
Computational Identification of Plant MicroRNAs and Their Targets, Including a Stress-Induced miRNA
Jones-Rhoades, M. W., & Bartel, D. P. (2004) · Molecular Cell · doi:10.1016/j.molcel.2004.05.027 · Cited by 2,284
microRNA-Directed Phasing during Trans-Acting siRNA Biogenesis in Plants
Allen, E., Xie, Z., Gustafson, A. M., & Carrington, J. C. (2005) · Cell · doi:10.1016/j.cell.2005.04.004 · Cited by 2,268
Genome-wide High-Resolution Mapping and Functional Analysis of DNA Methylation in Arabidopsis
Zhang, X., Yazaki, J., Sundaresan, A., Cokus, S., Chan, S. W.-L., Chen, H., Henderson, I. R., Shinn, P., Pellegrini, M., Jacobsen, S. E., et al. (2006) · Cell · doi:10.1016/j.cell.2006.08.003 · Cited by 1,815
Self-citationCleavage of Scarecrow-like mRNA Targets Directed by a Class of Arabidopsis miRNA
Llave, C., Xie, Z., Kasschau, K. D., & Carrington, J. C. (2002) · Science · doi:10.1126/science.1076311 · Cited by 1,627
Genetic and Functional Diversification of Small RNA Pathways in Plants
Xie, Z., Johansen, L. K., Gustafson, A. M., Kasschau, K. D., Lellis, A. D., Zilberman, D., Jacobsen, S. E., & Carrington, J. C. (2004) · PLoS Biology · doi:10.1371/journal.pbio.0020104 · Cited by 1,584
Sorting of Small RNAs into Arabidopsis Argonaute Complexes Is Directed by the 5′ Terminal Nucleotide
Mi, S., Cai, T., Hu, Y., Chen, Y., Hodges, E., Ni, F., Wu, L., Li, S., Zhou, H., Long, C., et al. (2008) · Cell · doi:10.1016/j.cell.2008.02.034 · Cited by 1,323
A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana
Rajagopalan, R., Vaucheret, H., Trejo, J., & Bartel, D. P. (2006) · Genes & Development · doi:10.1101/gad.1476406 · Cited by 1,298
Park, W., Li, J., Song, R., Messing, J., & Chen, X. (2002) · Current Biology · doi:10.1016/s0960-9822(02)01017-5 · Cited by 1,244
Baumberger, N., & Baulcombe, D. C. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0505461102 · Cited by 1,047
Vaucheret, H., Vazquez, F., Crété, P., & Bartel, D. P. (2004) · Genes & Development · doi:10.1101/gad.1201404 · Cited by 995
Kasschau, K. D., Xie, Z., Allen, E., Llave, C., Chapman, E. J., Krizan, K. A., & Carrington, J. C. (2003) · Developmental Cell · doi:10.1016/s1534-5807(03)00025-x · Cited by 968
Perspective: machines for RNAi
Tomari, Y., & Zamore, P. D. (2005) · Genes & Development · doi:10.1101/gad.1284105 · Cited by 948
Peragine, A., Yoshikawa, M., Wu, G., Albrecht, H. L., & Poethig, R. S. (2004) · Genes & Development · doi:10.1101/gad.1231804 · Cited by 930
Gardening the genome: DNA methylation in Arabidopsis thaliana
Chan, S. W.-L., Henderson, I. R., & Jacobsen, S. E. (2005) · Nature Reviews Genetics · doi:10.1038/nrg1601 · Cited by 891
Large-Scale Transcriptional Activity in Chromosomes 21 and 22
Kapranov, P., Cawley, S. E., Drenkow, J., Bekiranov, S., Strausberg, R. L., Fodor, S. P. A., & Gingeras, T. R. (2002) · Science · doi:10.1126/science.1068597 · Cited by 869
Functions of microRNAs and related small RNAs in plants
Mallory, A. C., & Vaucheret, H. (2006) · Nature Genetics · doi:10.1038/ng1791 · Cited by 822
Endogenous trans-Acting siRNAs Regulate the Accumulation of Arabidopsis mRNAs
Vazquez, F., Vaucheret, H., Rajagopalan, R., Lepers, C., Gasciolli, V., Mallory, A. C., Hilbert, J.-L., Bartel, D. P., & Crété, P. (2004) · Molecular Cell · doi:10.1016/j.molcel.2004.09.028 · Cited by 801
A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis
Yoshikawa, M., Peragine, A., Park, M. Y., & Poethig, R. S. (2005) · Genes & Development · doi:10.1101/gad.1352605 · Cited by 737
RNA Polymerase IV Directs Silencing of Endogenous DNA
Herr, A. J., Jensen, M. B., Dalmay, T., & Baulcombe, D. C. (2005) · Science · doi:10.1126/science.1106910 · Cited by 717
Onodera, Y., Haag, J. R., Ream, T., Nunes, P. C., Pontes, O., & Pikaard, C. S. (2005) · Cell · doi:10.1016/j.cell.2005.02.007 · Cited by 654
Fahlgren, N., Montgomery, T. A., Howell, M. D., Allen, E., Dvorak, S. K., Alexander, A. L., & Carrington, J. C. (2006) · Current Biology · doi:10.1016/j.cub.2006.03.065 · Cited by 639
Vazquez, F., Gasciolli, V., Crété, P., & Vaucheret, H. (2004) · Current Biology · doi:10.1016/j.cub.2004.01.035 · Cited by 544
Genome-Wide Profiling and Analysis of Arabidopsis siRNAs
Kasschau, K. D., Fahlgren, N., Chapman, E. J., Sullivan, C. M., Cumbie, J. S., Givan, S. A., & Carrington, J. C. (2007) · PLoS Biology · doi:10.1371/journal.pbio.0050057 · Cited by 533
DRB4-Dependent TAS3 trans-Acting siRNAs Control Leaf Morphology through AGO7
Adenot, X., Elmayan, T., Lauressergues, D., Boutet, S., Bouché, N., Gasciolli, V., & Vaucheret, H. (2006) · Current Biology · doi:10.1016/j.cub.2006.03.035 · Cited by 475
Biochemical Specialization within Arabidopsis RNA Silencing Pathways
Qi, Y., Denli, A. M., & Hannon, G. J. (2005) · Molecular Cell · doi:10.1016/j.molcel.2005.06.014 · Cited by 441
An mRNA Cap Binding Protein, ABH1, Modulates Early Abscisic Acid Signal Transduction in Arabidopsis
Hugouvieux, V., Kwak, J. M., & Schroeder, J. I. (2001) · Cell · doi:10.1016/s0092-8674(01)00460-3 · Cited by 435
Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation
Qi, Y., He, X., Wang, X.-J., Kohany, O., Jurka, J., & Hannon, G. J. (2006) · Nature · doi:10.1038/nature05198 · Cited by 435
SERRATE is a novel nuclear regulator in primary microRNA processing in Arabidopsis
Yang, L., Liu, Z., Lu, F., Dong, A., & Huang, H. (2006) · The Plant Journal · doi:10.1111/j.1365-313x.2006.02835.x · Cited by 419
Atypical RNA polymerase subunits required for RNA-directed DNA methylation
Kanno, T., Huettel, B., Mette, M. F., Aufsatz, W., Jaligot, E., Daxinger, L., Kreil, D. P., Matzke, M., & Matzke, A. J. M. (2005) · Nature Genetics · doi:10.1038/ng1580 · Cited by 400
SERRATE: a new player on the plant microRNA scene
Lobbes, D., Rallapalli, G., Schmidt, D. D., Martin, C., & Clarke, J. (2006) · EMBO reports · doi:10.1038/sj.embor.7400806 · Cited by 390
AtXRN4 Degrades mRNA in Arabidopsis and Its Substrates Include Selected miRNA Targets
Souret, F. F., Kastenmayer, J. P., & Green, P. J. (2004) · Molecular Cell · doi:10.1016/j.molcel.2004.06.006 · Cited by 389
Pontier, D., Yahubyan, G., Vega, D., Bulski, A., Saez-Vasquez, J., Hakimi, M.-A., Lerbs-Mache, S., Colot, V., & Lagrange, T. (2005) · Genes & Development · doi:10.1101/gad.348405 · Cited by 382
Specification of Leaf Polarity in Arabidopsis via the trans-Acting siRNA Pathway
Garcia, D., Collier, S. A., Byrne, M. E., & Martienssen, R. A. (2006) · Current Biology · doi:10.1016/j.cub.2006.03.064 · Cited by 381
Chekanova, J. A., Gregory, B. D., Reverdatto, S. V., Chen, H., Kumar, R., Hooker, T., Yazaki, J., Li, P., Skiba, N., Peng, Q., et al. (2007) · Cell · doi:10.1016/j.cell.2007.10.056 · Cited by 339
Self-citationA Link Between mRNA Turnover and RNA Interference in Arabidopsis
Gazzani, S., Lawrenson, T., Woodward, C., Headon, D., & Sablowski, R. (2004) · Science · doi:10.1126/science.1101092 · Cited by 321
Boutet, S., Vazquez, F., Liu, J., Béclin, C., Fagard, M., Gratias, A., Morel, J.-B., Crété, P., Chen, X., & Vaucheret, H. (2003) · Current Biology · doi:10.1016/s0960-9822(03)00293-8 · Cited by 296
RNA silencing and genome regulation
Almeida, R., & Allshire, R. C. (2005) · Trends in Cell Biology · doi:10.1016/j.tcb.2005.03.006 · Cited by 260
TileMap: create chromosomal map of tiling array hybridizations
Ji, H., & Wong, W. H. (2005) · Bioinformatics · doi:10.1093/bioinformatics/bti593 · Cited by 238
The Arabidopsis SERRATE Gene Encodes a Zinc-Finger Protein Required for Normal Shoot Development
Prigge, M. J., & Wagner, D. R. (2001) · The Plant Cell · doi:10.1105/tpc.010095 · Cited by 197
Cotranscriptional mRNP assembly: from the DNA to the nuclear pore
Aguilera, A. (2005) · Current Opinion in Cell Biology · doi:10.1016/j.ceb.2005.03.001 · Cited by 171
Conservation and evolution of miRNA regulatory programs in plant development
Willmann, M. R., & Poethig, R. S. (2007) · Current Opinion in Plant Biology · doi:10.1016/j.pbi.2007.07.004 · Cited by 169
Crystal Structure of the Human Nuclear Cap Binding Complex
Mazza, C., Ohno, M., Segref, A., Mattaj, I. W., & Cusack, S. (2001) · Molecular Cell · doi:10.1016/s1097-2765(01)00299-4 · Cited by 143
A Whole-Genome RNAi Screen for C. elegans miRNA Pathway Genes
Parry, D. H., Xu, J., & Ruvkun, G. (2007) · Current Biology · doi:10.1016/j.cub.2007.10.058 · Cited by 102
Hugouvieux, V., Murata, Y., Young, J. J., Kwak, J. M., Mackesy, D. Z., & Schroeder, J. I. (2002) · PLANT PHYSIOLOGY · doi:10.1104/pp.009480 · Cited by 87
Cited by
The expanding world of small RNAs in plants
Borges, F., & Martienssen, R. A. (2015) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm4085 · Cited by 1,016
Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs
Rogers, K., & Chen, X. (2013) · The Plant Cell · doi:10.1105/tpc.113.113159 · Cited by 935
Reconsidering plant memory: Intersections between stress recovery, RNA turnover, and epigenetics
Crisp, P. A., Ganguly, D., Eichten, S. R., Borevitz, J. O., & Pogson, B. J. (2016) · Science Advances · doi:10.1126/sciadv.1501340 · Cited by 708
Small RNA sorting: matchmaking for Argonautes
Czech, B., & Hannon, G. J. (2011) · Nature Reviews Genetics · doi:10.1038/nrg2916 · Cited by 605
Estavillo, G. M., Crisp, P. A., Pornsiriwong, W., Wirtz, M., Collinge, D., Carrie, C., Giraud, E., Whelan, J., David, P., Javot, H., et al. (2011) · The Plant Cell · doi:10.1105/tpc.111.091033 · Cited by 553
Metadata
- Authors
- Gregory, B. D., O'Malley, R. C., Lister, R., Urich, M. A., Tonti-Filippini, J., Chen, H., Millar, A. H., & Ecker, J. R.
- Venue
- Developmental Cell
- Publisher
- Elsevier BV
- Published
- 2008-06
- Volume
- 14
- Issue
- 6
- Pages
- 854-866
- ISSN
- 1534-5807 (ISSN-L)
- OpenAlex
- W2067084692
- Cited by
- 411
- References
- 48
- FWCI
- 42.81
- Type
- journal article
- Language
- en
- Open access
- bronze
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