Symbiosis in eukaryotic evolution
Open accessAbstract
Fifty years ago, Lynn Margulis, inspiring in early twentieth-century ideas that put forward a symbiotic origin for some eukaryotic organelles, proposed a unified theory for the origin of the eukaryotic cell based on symbiosis as evolutionary mechanism. Margulis was profoundly aware of the importance of symbiosis in the natural microbial world and anticipated the evolutionary significance that integrated cooperative interactions might have as mechanism to increase cellular complexity. Today, we have started fully appreciating the vast extent of microbial diversity and the importance of syntrophic metabolic cooperation in natural ecosystems, especially in sediments and microbial mats. Also, not only the symbiogenetic origin of mitochondria and chloroplasts has been clearly demonstrated, but improvement in phylogenomic methods combined with recent discoveries of archaeal lineages more closely related to eukaryotes further support the symbiogenetic origin of the eukaryotic cell. Margulis left us in legacy the idea of 'eukaryogenesis by symbiogenesis'. Although this has been largely verified, when, where, and specifically how eukaryotic cells evolved are yet unclear. Here, we shortly review current knowledge about symbiotic interactions in the microbial world and their evolutionary impact, the status of eukaryogenetic models and the current challenges and perspectives ahead to reconstruct the evolutionary path to eukaryotes.
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Cites
Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya.
Woese, C. R., Kandler, O., & Wheelis, M. L. (1990) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.87.12.4576 · Cited by 6,128 · see citing works
Phylogenetic structure of the prokaryotic domain: The primary kingdoms
Woese, C. R., & Fox, G. E. (1977) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.74.11.5088 · Cited by 4,131 · see citing works
Going back to the roots: the microbial ecology of the rhizosphere
Philippot, L., Raaijmakers, J. M., Lemanceau, P., & van der Putten, W. H. (2013) · Nature Reviews Microbiology · doi:10.1038/nrmicro3109 · Cited by 3,925 · see citing works
A marine microbial consortium apparently mediating anaerobic oxidation of methane
Boëtius, A., Ravenschlag, K., Schubert, C. J., Rickert, D., Widdel, F., Gieseke, A., Amann, R., Jørgensen, B. B., Witte, U. F. M., & Pfannkuche, O. (2000) · Nature · doi:10.1038/35036572 · Cited by 3,121 · see citing works
Evolutionary divergence and convergence in proteins.
ZUCKERKANDL, E., & PAULING, L. (1965) · Evolving Genes and Proteins · doi:10.1016/b978-1-4832-2734-4.50017-6 · Cited by 3,020 · see citing works
Wolbachia: master manipulators of invertebrate biology
Werren, J. H., Baldo, L., & Clark, M. E. (2008) · Nature Reviews Microbiology · doi:10.1038/nrmicro1969 · Cited by 2,830 · see citing works
The rise of oxygen in Earth's early ocean and atmosphere
Lyons, T. W., Reinhard, C. T., & Planavsky, N. J. (2014) · Nature · doi:10.1038/nature13068 · Cited by 2,810 · see citing works
Hardoim, P. R., van Overbeek, L. S., Berg, G., Pirttilä, A. M., Compant, S., Campisano, A., Döring, M., & Sessitsch, A. (2015) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00050-14 · Cited by 2,740 · see citing works
A Molecular View of Microbial Diversity and the Biosphere
Pace, N. R. (1997) · Science · doi:10.1126/science.276.5313.734 · Cited by 2,735 · see citing works
Yarza, P., Yilmaz, P., Pruesse, E., Glöckner, F. O., Ludwig, W., SCHLEIFER, K. H., Whitman, W. B., Euzéby, J. P., Amann, R., & Rossello-Mora, R. A. (2014) · Nature Reviews Microbiology · doi:10.1038/nrmicro3330 · Cited by 2,563 · see citing works
Insights into the phylogeny and coding potential of microbial dark matter
Rinke, C., Schwientek, P., Sczyrba, A., Ivanova, N. N., Anderson, I. J., Cheng, J.-F., Darling, A., Malfatti, S., Swan, B. K., Gies, E. A., et al. (2013) · Nature · doi:10.1038/nature12352 · Cited by 2,394 · see citing works
Diet–microbiota interactions as moderators of human metabolism
Sonnenburg, J. L., & Bäckhed, F. (2016) · Nature · doi:10.1038/nature18846 · Cited by 2,257 · see citing works
A new view of the tree of life
Hug, L. A., Baker, B. J., Anantharaman, K., Brown, C. T., Probst, A. J., Castelle, C. J., Butterfield, C. N., Hernsdorf, A. W., Amano, Y., Ise, K., et al. (2016) · Nature Microbiology · doi:10.1038/nmicrobiol.2016.48 · Cited by 2,039 · see citing works
The microbiome and innate immunity
Thaiss, C. A., Zmora, N., Levy, M., & Elinav, E. (2016) · Nature · doi:10.1038/nature18847 · Cited by 2,012 · see citing works
On the origin of mitosing cells
Sagan, L. (1967) · Journal of Theoretical Biology · doi:10.1016/0022-5193(67)90079-3 · Cited by 1,870 · see citing works
The New Higher Level Classification of Eukaryotes with Emphasis on the Taxonomy of Protists
Adl, S., Simpson, A., Farmer, M. A., Andersen, R., Anderson, O., Barta, J. R., Bowser, S., Brugerolle, G., Fensome, R., Fredericq, S., et al. (2005) · Journal of Eukaryotic Microbiology · doi:10.1111/j.1550-7408.2005.00053.x · Cited by 1,749 · see citing works
The genome sequence of Rickettsia prowazekii and the origin of mitochondria
Andersson, S. G. E., Zomorodipour, A., Andersson, J. O., Sicheritz-Pontén, T., Alsmark, U. C. M., Podowski, R. M., Näslund, A. K., Eriksson, A.-S., Winkler, H. H., & Kurland, C. G. (1998) · Nature · doi:10.1038/24094 · Cited by 1,697 · see citing works
Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomes
Timmis, J., Ayliffe, M., Huang, C.-Y., & Martin, W. (2004) · Nature reviews genetics · doi:10.1038/nrg1271 · Cited by 1,553 · see citing works
A Bayesian Mixture Model for Across-Site Heterogeneities in the Amino-Acid Replacement Process
Lartillot, N., & Philippe, H. (2004) · Molecular Biology and Evolution · doi:10.1093/molbev/msh112 · Cited by 1,516 · see citing works
Extreme genome reduction in symbiotic bacteria
McCutcheon, J. P., & Moran, N. A. (2012) · Nature Reviews Microbiology · doi:10.1038/nrmicro2670 · Cited by 1,464 · see citing works
Margulis, L. (1981) · Cited by 1,399 · see citing works
Complex archaea that bridge the gap between prokaryotes and eukaryotes
Spang, A., Saw, J. H., Jørgensen, S. L., Zaremba-Niedzwiedzka, K., Martijn, J., Lind, A. E., van Eijk, R., Schleper, C., Guy, L., & Ettema, T. J. G. (2015) · Nature · doi:10.1038/nature14447 · Cited by 1,324 · see citing works
The Hydrogen Hypothesis for the First Eukaryote
Martin, W., & Müller, M. (1998) · Nature · doi:10.1038/32096 · Cited by 1,282 · see citing works
Asgard archaea illuminate the origin of eukaryotic cellular complexity
Zaremba-Niedzwiedzka, K., Caceres, E. F., Saw, J. H., Bäckström, D., Juzokaite, L., Vancaester, E., Seitz, K. W., Anantharaman, K., Starnawski, P., Kjeldsen, K. U., et al. (2017) · Nature · doi:10.1038/nature21031 · Cited by 1,226 · see citing works
Methane-Consuming Archaea Revealed by Directly Coupled Isotopic and Phylogenetic Analysis
Orphan, V. J., House, C. H., Hinrichs, K., McKeegan, K. D., & DeLong, E. F. (2001) · Science · doi:10.1126/science.1061338 · Cited by 1,101 · see citing works
Tracing the stepwise oxygenation of the Proterozoic ocean
Scott, C., Lyons, T. W., Bekker, A., Shen, Y., Poulton, S. W., Chu, X., & Anbar, A. D. (2008) · Nature · doi:10.1038/nature06811 · Cited by 1,098 · see citing works
Symbiotic diversity in marine animals: the art of harnessing chemosynthesis
Dubilier, N., Bergin, C., & Lott, C. (2008) · Nature Reviews Microbiology · doi:10.1038/nrmicro1992 · Cited by 1,073 · see citing works
The 1.2-Megabase Genome Sequence of Mimivirus
Raoult, D., Audic, S., Robert, C., Abergel, C., Renesto, P., Ogata, H., Scola, B. L., Suzan, M., & Claverie, J. (2004) · Science · doi:10.1126/science.1101485 · Cited by 1,045 · see citing works
Spatial structure, cooperation and competition in biofilms
Nadell, C. D., Drescher, K., & Foster, K. R. (2016) · Nature Reviews Microbiology · doi:10.1038/nrmicro.2016.84 · Cited by 978 · see citing works
Microbial syntrophy: interaction for the common good
Morris, B. E. L., Henneberger, R. M., Huber, H., & Moissl‐Eichinger, C. (2013) · FEMS Microbiology Reviews · doi:10.1111/1574-6976.12019 · Cited by 918 · see citing works
Estimating the timing of early eukaryotic diversification with multigene molecular clocks
Parfrey, L. W., Lahr, D. J. G., Knoll, A. H., & Katz, L. A. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1110633108 · Cited by 899 · see citing works
Eukaryotic evolution, changes and challenges
Embley, T. M., & Martin, W. (2006) · Nature · doi:10.1038/nature04546 · Cited by 867 · see citing works
Biochemistry and Evolution of Anaerobic Energy Metabolism in Eukaryotes
Müller, M., Mentel, M., van Hellemond, J. J., Henze, K., Woehle, C., Gould, S. B., Yu, R.-Y., van der Giezen, M., Tielens, A. G. M., & Martin, W. F. (2012) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.05024-11 · Cited by 838 · see citing works
Ancient Invasions: From Endosymbionts to Organelles
Dyall, S. D., Brown, M. T., & Johnson, P. J. (2004) · Science · doi:10.1126/science.1094884 · Cited by 819 · see citing works
Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics
Evans, P. N., Parks, D. H., Chadwick, G. L., Robbins, S. J., Orphan, V. J., Golding, S. D., & Tyson, G. W. (2015) · Science · doi:10.1126/science.aac7745 · Cited by 785 · see citing works
Gene transfer to the nucleus and the evolution of chloroplasts
Martin, W., Stoebe, B., Goremykin, V., Hansmann, S., Hasegawa, M., & Kowallik, K. V. (1998) · Nature · doi:10.1038/30234 · Cited by 772 · see citing works
Wolbachia as a bacteriocyte-associated nutritional mutualist
Hosokawa, T., Koga, R., Kikuchi, Y., Meng, X., & Fukatsu, T. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0911476107 · Cited by 771 · see citing works
(1965) · Elsevier eBooks · doi:10.1016/c2013-0-11981-2 · Cited by 747 · see citing works
Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru
Biddle, J. F., Lipp, J. S., Lever, M. A., Lloyd, K. G., Sørensen, K. B., Anderson, R. E., Fredricks, H. F., Elvert, M., Kelly, T. J., Schrag, D. P., et al. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0600035103 · Cited by 712 · see citing works
Eukaryotic organisms in Proterozoic oceans
Knoll, A. H., Javaux, E. J., Hewitt, D., & Cohen, P. (2006) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2006.1843 · Cited by 701 · see citing works
Cavanaugh, C. M., Gardiner, S. L., Jones, M. L., Jannasch, H. W., & Waterbury, J. B. (1981) · Science · doi:10.1126/science.213.4505.340 · Cited by 677 · see citing works
Methanobacillus omelianskii, a symbiotic association of two species of bacteria
Bryant, M. P., Wolin, E. A., Wolin, M. J., & WOLFE, R. S. (1967) · Archives of Microbiology · doi:10.1007/bf00406313 · Cited by 671 · see citing works
Genomic insights into the marine sponge microbiome
Hentschel, U., Piel, J., Degnan, S. M., & Taylor, M. W. (2012) · Nature Reviews Microbiology · doi:10.1038/nrmicro2839 · Cited by 659 · see citing works
Gray, M. W. (2012) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a011403 · Cited by 639 · see citing works
The timing of eukaryotic evolution: Does a relaxed molecular clock reconcile proteins and fossils?
Douzery, E. J. P., Snell, E. A., Bapteste, E., Delsuc, F., & Philippe, H. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0403984101 · Cited by 638 · see citing works
Cavalier-Smith, T. (1999) · Journal of Eukaryotic Microbiology · doi:10.1111/j.1550-7408.1999.tb04614.x · Cited by 629 · see citing works
Syntrophic exchange in synthetic microbial communities
Mee, M. T., Collins, J. J., Church, G. M., & Wang, H. H. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1405641111 · Cited by 619 · see citing works
Origins of Prokaryotes, Eukaryotes, Mitochondria, and Chloroplasts
Schwartz, R. M., & Dayhoff, M. O. (1978) · Science · doi:10.1126/science.202030 · Cited by 581 · see citing works
A molecular timescale of eukaryote evolution and the rise of complex multicellular life
Hedges, S. B., Blair, J. E., Venturi, M. L., & Shoe, J. L. (2004) · BMC Evolutionary Biology · doi:10.1186/1471-2148-4-2 · Cited by 578 · see citing works
The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology
Pester, M., Schleper, C., & Wagner, M. (2011) · Current Opinion in Microbiology · doi:10.1016/j.mib.2011.04.007 · Cited by 570 · see citing works
Intercellular wiring enables electron transfer between methanotrophic archaea and bacteria
Wegener, G., Krukenberg, V., Riedel, D., Tegetmeyer, H. E., & Boëtius, A. (2015) · Nature · doi:10.1038/nature15733 · Cited by 569 · see citing works
Monophyly of Primary Photosynthetic Eukaryotes: Green Plants, Red Algae, and Glaucophytes
Rodríguez‐Ezpeleta, N., Brinkmann, H., Burey, S. C., Roure, B., Burger, G., Löffelhardt, W., Bohnert, H. J., Philippe, H., & Lang, B. F. (2005) · Current Biology · doi:10.1016/j.cub.2005.06.040 · Cited by 559 · see citing works
Learning how to live together: genomic insights into prokaryote–animal symbioses
Moyá, A., Peretó, J. G., Gil, R., & Latorre, A. (2008) · Nature Reviews Genetics · doi:10.1038/nrg2319 · Cited by 551 · see citing works
Predominant archaea in marine sediments degrade detrital proteins
Lloyd, K. G., Schreiber, L., Petersen, D. G., Kjeldsen, K. U., Lever, M. A., Steen, A. D., Stepanauskas, R., Richter, M., Kleindienst, S., Lenk, S., et al. (2013) · Nature · doi:10.1038/nature12033 · Cited by 546 · see citing works
Genomic evidence for two functionally distinct gene classes
Rivera, M. C., Jain, R., Moore, J. E., & Lake, J. A. (1998) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.95.11.6239 · Cited by 544 · see citing works
Genomic Insights into Syntrophy: The Paradigm for Anaerobic Metabolic Cooperation
Sieber, J. R., McInerney, M. J., & Gunsalus, R. P. (2010) · Annual Review of Microbiology · doi:10.1146/annurev-micro-090110-102844 · Cited by 524 · see citing works
An archaeal origin of eukaryotes supports only two primary domains of life
Williams, T. A., Foster, P. G., Cox, C. J., & Embley, T. M. (2013) · Nature · doi:10.1038/nature12779 · Cited by 519 · see citing works
The Hologenome Concept: Helpful or Hollow?
Moran, N. A., & Sloan, D. B. (2015) · PLoS Biology · doi:10.1371/journal.pbio.1002311 · Cited by 508 · see citing works
Early evolution and the origin of eukaryotes
Sogin, M. L. (1991) · Current Opinion in Genetics & Development · doi:10.1016/s0959-437x(05)80192-3 · Cited by 500 · see citing works
The Number, Speed, and Impact of Plastid Endosymbioses in Eukaryotic Evolution
Keeling, P. J. (2013) · Annual Review of Plant Biology · doi:10.1146/annurev-arplant-050312-120144 · Cited by 484 · see citing works
Syntrophy in anaerobic global carbon cycles
McInerney, M. J., Sieber, J. R., & Gunsalus, R. P. (2009) · Current Opinion in Biotechnology · doi:10.1016/j.copbio.2009.10.001 · Cited by 473 · see citing works
Untangling Genomes from Metagenomes: Revealing an Uncultured Class of Marine Euryarchaeota
Iverson, V., Morris, R. M., Frazar, C. D., Berthiaume, C. T., Morales, R. L., & Armbrust, E. V. (2012) · Science · doi:10.1126/science.1212665 · Cited by 457 · see citing works
The Puzzle of Plastid Evolution
Archibald, J. M. (2009) · Current Biology · doi:10.1016/j.cub.2008.11.067 · Cited by 451 · see citing works
Symbiosis insights through metagenomic analysis of a microbial consortium
Woyke, T., Teeling, H., Ivanova, N., Huntemann, M., Richter, M., Glöckner, F. O., Boffelli, D., Anderson, I., Barry, K., Shapiro, H., et al. (2006) · Nature · doi:10.1038/nature05192 · Cited by 450 · see citing works
Has the endosymbiont hypothesis been proven?
Gray, M. W., & Doolittle, W. F. (1982) · Microbiological Reviews · doi:10.1128/mr.46.1.1-42.1982 · Cited by 429 · see citing works
The origin of red algae and the evolution of chloroplasts
Moreira, D., Guyader, H. L., & Philippe, H. (2000) · Nature · doi:10.1038/35011054 · Cited by 427 · see citing works
Self-citationFive Kingdoms: An Illustrated Guide to the Phyla of Life on Earth
Schmid, R., Margulis, L., & Schwartz, K. V. (1988) · Taxon · doi:10.2307/1222104 · Cited by 419 · see citing works
A Eukaryote without a Mitochondrial Organelle
Karnkowska, A., Vacek, V., Zubáčová, Z., Treitli, S. C., Vargová, R., Eme, L., Novák, L., Žárský, V., Barlow, L. D., Herman, E. K., et al. (2016) · Current Biology · doi:10.1016/j.cub.2016.03.053 · Cited by 417 · see citing works
Self-citationPhysiology, Ecology, Phylogeny, and Genomics of Microorganisms Capable of Syntrophic Metabolism
McInerney, M. J., Struchtemeyer, C. G., Sieber, J. R., Mouttaki, H., Stams, A. J. M., Schink, B., Rohlin, L., & Gunsalus, R. P. (2008) · Annals of the New York Academy of Sciences · doi:10.1196/annals.1419.005 · Cited by 406 · see citing works
Paleobiological Perspectives on Early Eukaryotic Evolution
Knoll, A. H. (2014) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a016121 · Cited by 394 · see citing works
Components of Coated Vesicles and Nuclear Pore Complexes Share a Common Molecular Architecture
Devos, D. P., Dokudovskaya, S., Alber, F., Williams, R., Chait, B. T., Šali, A., & Rout, M. P. (2004) · PLoS Biology · doi:10.1371/journal.pbio.0020380 · Cited by 390 · see citing works
Happy together: microbial communities that hook up to swap electrons
Lovley, D. R. (2016) · The ISME Journal · doi:10.1038/ismej.2016.136 · Cited by 385 · see citing works
Archaeal-eubacterial mergers in the origin of Eukarya: phylogenetic classification of life.
Margulis, L. (1996) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.93.3.1071 · Cited by 358 · see citing works
Moran, N., & Bennett, G. (2014) · Annual Review of Microbiology · doi:10.1146/annurev-micro-091213-112901 · Cited by 357 · see citing works
The engine of the reef: photobiology of the coral–algal symbiosis
Roth, M. (2014) · Frontiers in Microbiology · doi:10.3389/fmicb.2014.00422 · Cited by 355 · see citing works
Rhizobium–legume symbioses: the crucial role of plant immunity
Gourion, B., Berrabah, F., Ratet, P., & Stacey, G. S. (2014) · Trends in Plant Science · doi:10.1016/j.tplants.2014.11.008 · Cited by 354 · see citing works
Mealybug β-proteobacterial endosymbionts contain γ-proteobacterial symbionts
von Dohlen, C. D., Kohler, S., Alsop, S. T., & McManus, W. R. (2001) · Nature · doi:10.1038/35086563 · Cited by 353 · see citing works
A Small Microbial Genome: The End of a Long Symbiotic Relationship?
Pérez-Brocal, V., Gil, R., Ramos, S., Lamelas, A., Postigo, M., Michelena, J. M., Silva, F. J., Moya, A., & Latorre, A. (2006) · Science · doi:10.1126/science.1130441 · Cited by 346 · see citing works
The archaeal ‘TACK’ superphylum and the origin of eukaryotes
Guy, L., & Ettema, T. J. G. (2011) · Trends in Microbiology · doi:10.1016/j.tim.2011.09.002 · Cited by 344 · see citing works
Algal ancestor of land plants was preadapted for symbiosis
Delaux, P., Radhakrishnan, G. V., Jayaraman, D., Cheema, J., Malbreil, M., Volkening, J. D., Sekimoto, H., Nishiyama, T., Melkonian, M., Pokorny, L., et al. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1515426112 · Cited by 326 · see citing works
Moreira, D., & López‐García, P. (1998) · Journal of Molecular Evolution · doi:10.1007/pl00006408 · Cited by 324 · see citing works
Self-citationThe early evolution of lipid membranes and the three domains of life
Lombard, J., López-García, P., & Moreira, D. (2012) · Nature Reviews Microbiology · doi:10.1038/nrmicro2815 · Cited by 320 · see citing works
Self-citationJørgensen, S. L., Hannisdal, B., Lanzén, A., Baumberger, T., Flesland, K., Fonseca, R., Øvreås, L., Steen, I. H., Thorseth, I. H., Pedersen, R. B., et al. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1207574109 · Cited by 315 · see citing works
An Early-Branching Freshwater Cyanobacterium at the Origin of Plastids
Ponce-Toledo, R. I., Deschamps, P., López‐García, P., Zivanovic, Y., Benzerara, K., & Moreira, D. (2017) · Current Biology · doi:10.1016/j.cub.2016.11.056 · Cited by 311 · see citing works
Self-citationOrganic-walled microfossils in 3.2-billion-year-old shallow-marine siliciclastic deposits
Javaux, E., Marshall, C. P., & Bekker, A. (2010) · Nature · doi:10.1038/nature08793 · Cited by 308 · see citing works
Defining the Core Microbiome in Corals’ Microbial Soup
Hernández‐Agreda, A., Gates, R. D., & Ainsworth, T. D. (2016) · Trends in Microbiology · doi:10.1016/j.tim.2016.11.003 · Cited by 308 · see citing works
Eocytes: a new ribosome structure indicates a kingdom with a close relationship to eukaryotes.
Lake, J. A., Henderson, E. R., Oakes, M., & Clark, M. (1984) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.81.12.3786 · Cited by 296 · see citing works
Pernthaler, A., Dekas, A., Brown, C. T., Goffredi, S. K., Embaye, T., & Orphan, V. J. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0711303105 · Cited by 291 · see citing works
The Genotypic View of Social Interactions in Microbial Communities
Mitri, S., & Foster, K. R. (2013) · Annual Review of Genetics · doi:10.1146/annurev-genet-111212-133307 · Cited by 291 · see citing works
Precision of molecular time estimates
Hedges, S. B., & Kumar, S. (2004) · Trends in Genetics · doi:10.1016/j.tig.2004.03.004 · Cited by 289 · see citing works
The molecular ecology of microbial eukaryotes unveils a hidden world
Moreira, D., & López‐García, P. (2002) · Trends in Microbiology · doi:10.1016/s0966-842x(01)02257-0 · Cited by 288 · see citing works
Self-citationOn the Age of Eukaryotes: Evaluating Evidence from Fossils and Molecular Clocks
Eme, L., Sharpe, S. C., Brown, M. W., & Roger, A. J. (2014) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a016139 · Cited by 287 · see citing works
Self-citationReconstructing Early Events in Eukaryotic Evolution
Roger, A. J. (1999) · The American Naturalist · doi:10.1086/303290 · Cited by 283 · see citing works
Has the endosymbiont hypothesis been proven?
Gray, M. W., & Doolittle, W. F. (1982) · Microbiological Reviews · doi:10.1128/mmbr.46.1.1-42.1982 · Cited by 282 · see citing works
Siegl, A., Kamke, J., Hochmuth, T., Piel, J., Richter, M., Liang, C., Dandekar, T., & Hentschel, U. (2011) · The ISME Journal · doi:10.1038/ismej.2010.95 · Cited by 276 · see citing works
Embley, T. M., & Hirt, R. P. (1998) · Current Opinion in Genetics & Development · doi:10.1016/s0959-437x(98)80029-4 · Cited by 273 · see citing works
The origin of eukaryotes: a reappraisal
Duve, C. D. (2007) · Nature Reviews Genetics · doi:10.1038/nrg2071 · Cited by 273 · see citing works
The impact of endosymbionts on the evolution of host sex-determination mechanisms
Cordaux, R., Bouchon, D., & Grève, P. (2011) · Trends in Genetics · doi:10.1016/j.tig.2011.05.002 · Cited by 271 · see citing works
The Santa Barbara Basin is a symbiosis oasis
Bernhard, J. M., Buck, K. R., Farmer, M. A., & Bowser, S. S. (2000) · Nature · doi:10.1038/47476 · Cited by 270 · see citing works
Late acquisition of mitochondria by a host with chimaeric prokaryotic ancestry
Pittis, A. A., & Gabaldón, T. (2016) · Nature · doi:10.1038/nature16941 · Cited by 259 · see citing works
Networks of energetic and metabolic interactions define dynamics in microbial communities
Embree, M., Liu, J. K., Al-Bassam, M. M., & Zengler, K. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1506034112 · Cited by 256 · see citing works
Rapid evolution of stability and productivity at the origin of a microbial mutualism
Hillesland, K. L., & Stahl, D. A. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0908456107 · Cited by 254 · see citing works
Baurain, D., Brinkmann, H., Petersen, J., Rodríguez‐Ezpeleta, N., Stechmann, A., Demoulin, V., Roger, A. J., Burger, G., Lang, B. F., & Philippe, H. (2010) · Molecular Biology and Evolution · doi:10.1093/molbev/msq059 · Cited by 248 · see citing works
Early–branching or fast–evolving eukaryotes? An answer based on slowly evolving positions
Philippe, H., Lopez, P., Brinkmann, H., Budin, K., Germot, A., Laurent, J., Moreira, D., Müller, M., & Guyader, H. L. (2000) · Proceedings of the Royal Society B Biological Sciences · doi:10.1098/rspb.2000.1130 · Cited by 247 · see citing works
Self-citationMetabolic symbiosis at the origin of eukaryotes
López‐García, P., & Moreira, D. (1999) · Trends in Biochemical Sciences · doi:10.1016/s0968-0004(98)01342-5 · Cited by 240 · see citing works
Self-citationRepeated replacement of an intrabacterial symbiont in the tripartite nested mealybug symbiosis
Husník, F., & McCutcheon, J. P. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1603910113 · Cited by 240 · see citing works
Endosymbiotic associations within protists
Nowack, E., & Melkonian, M. (2010) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2009.0188 · Cited by 239 · see citing works
The chimeric eukaryote: Origin of the nucleus from the karyomastigont in amitochondriate protists
Margulis, L., Dolan, M. F., & Guerrero, R. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.97.13.6954 · Cited by 233 · see citing works
Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat
Harris, J. K., Caporaso, J. G., Walker, J. J., Spear, J. R., Gold, N. J., Robertson, C. E., Hugenholtz, P., Goodrich, J. K., McDonald, D. T., Knights, D., et al. (2012) · The ISME Journal · doi:10.1038/ismej.2012.79 · Cited by 232 · see citing works
Cavalier‐Smith, T. (1982) · Biological Journal of the Linnean Society · doi:10.1111/j.1095-8312.1982.tb02023.x · Cited by 223 · see citing works
Sathi, S. N., Dagan, T., Landan, G., Janssen, A., Steel, M., McInerney, J. O., Deppenmeier, U., & Martin, W. F. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1209119109 · Cited by 222 · see citing works
Symbiogenesis: the holobiont as a unit of evolution.
Guerrero, R., Margulis, L., & Berlanga, M. (2013) · PubMed · doi:10.2436/20.1501.01.188 · Cited by 219 · see citing works
Sassera, D., Beninati, T., Bandi, C., Bouman, E. A. P., Sacchi, L., Fabbi, M., & Lo, N. C. (2006) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/ijs.0.64386-0 · Cited by 215 · see citing works
A molecular time-scale for eukaryote evolution recalibrated with the continuous microfossil record
Berney, C., & Pawlowski, J. (2006) · Proceedings of the Royal Society B: Biological Sciences · doi:10.1098/rspb.2006.3537 · Cited by 212 · see citing works
Symbiotic options for the conquest of land
Field, K. J., Pressel, S., Duckett, J. G., Rimington, W. R., & Bidartondo, M. I. (2015) · Trends in Ecology & Evolution · doi:10.1016/j.tree.2015.05.007 · Cited by 211 · see citing works
Methane as Fuel for Anaerobic Microorganisms
Thauer, R. K., & Shima, S. (2008) · Annals of the New York Academy of Sciences · doi:10.1196/annals.1419.000 · Cited by 209 · see citing works
Mereschkowsky, C. (1910) · Medical Entomology and Zoology · Cited by 205 · see citing works
Hatzenpichler, R., Connon, S. A., Goudeau, D., Malmstrom, R. R., Woyke, T., & Orphan, V. J. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1603757113 · Cited by 203 · see citing works
Margulis, L., Chapman, M., Guerrero, R., & Hall, J. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0604985103 · Cited by 201 · see citing works
Bacterial Vesicle Secretion and the Evolutionary Origin of the Eukaryotic Endomembrane System
Gould, S. B., Garg, S. G., & Martin, W. F. (2016) · Trends in Microbiology · doi:10.1016/j.tim.2016.03.005 · Cited by 193 · see citing works
Protist classification and the kingdoms of organisms
WHITTAKER, R. H., & Margulis, L. (1978) · Biosystems · doi:10.1016/0303-2647(78)90023-0 · Cited by 192 · see citing works
Symbionticism and the Origin of Species.
(1927) · JAMA · doi:10.1001/jama.1927.02680460059034 · Cited by 187 · see citing works
Howe, C. J., Barbrook, A. C., Nisbet, R. E. R., Lockhart, P. J., & Larkum, A. W. D. (2008) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2008.0050 · Cited by 186 · see citing works
Precision of molecular time estimates
BLAIRHEDGES, S. (2004) · Trends in Genetics · doi:10.1016/s0168-9525(04)00072-1 · Cited by 186 · see citing works
The Deep Archaeal Roots of Eukaryotes
Yutin, N., Makarova, K. S., Mekhedov, S., Wolf, Y. I., & Koonin, E. V. (2008) · Molecular Biology and Evolution · doi:10.1093/molbev/msn108 · Cited by 181 · see citing works
Roger, A. J., & Hug, L. A. (2006) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2006.1845 · Cited by 180 · see citing works
Boyer, M., Madoui, M., Gimenez, G., Scola, B. L., & Raoult, D. (2010) · PLoS ONE · doi:10.1371/journal.pone.0015530 · Cited by 178 · see citing works
Thiergart, T., Landan, G., Schenk, M., Dagan, T., & Martin, W. F. (2012) · Genome Biology and Evolution · doi:10.1093/gbe/evs018 · Cited by 170 · see citing works
The origin of eukaryotes and their relationship with the Archaea: are we at a phylogenomic impasse?
Gribaldo, S., Poole, A. M., Daubin, V., Forterre, P., & Brochier‐Armanet, C. (2010) · Nature Reviews Microbiology · doi:10.1038/nrmicro2426 · Cited by 159 · see citing works
Experimental evolution in biofilm populations
Steenackers, H. P. L., Parijs, I., Foster, K. R., & Vanderleyden, J. (2016) · FEMS Microbiology Reviews · doi:10.1093/femsre/fuw002 · Cited by 156 · see citing works
Genomic inference of the metabolism of cosmopolitan subsurface Archaea, Hadesarchaea
Baker, B. J., Saw, J. H. W., Lind, A. E., Lazar, C. S., Hinrichs, K., Teske, A., & Ettema, T. J. G. (2016) · Nature Microbiology · doi:10.1038/nmicrobiol.2016.2 · Cited by 153 · see citing works
Evaluating hypotheses for the origin of eukaryotes
Poole, A. M., & Penny, D. (2006) · BioEssays · doi:10.1002/bies.20516 · Cited by 151 · see citing works
Swapping symbionts in spittlebugs: evolutionary replacement of a reduced genome symbiont
Koga, R., & Moran, N. A. (2014) · The ISME Journal · doi:10.1038/ismej.2013.235 · Cited by 151 · see citing works
A congruent phylogenomic signal places eukaryotes within the Archaea
Williams, T. A., Foster, P. G., Nye, T. M. W., Cox, C. J., & Embley, T. M. (2012) · Proceedings of the Royal Society B Biological Sciences · doi:10.1098/rspb.2012.1795 · Cited by 148 · see citing works
Metabolic versatility of the Riftia pachyptila endosymbiont revealed through metagenomics
Robidart, J. C., Bench, S. R., Feldman, R. A., Novoradovsky, A., Podell, S. B., Gaasterland, T., Allen, E. E., & Felbeck, H. (2008) · Environmental Microbiology · doi:10.1111/j.1462-2920.2007.01496.x · Cited by 146 · see citing works
Duperron, S., Sibuet, M., MacGregor, B. J., Kuypers, M. M. M., Fisher, C. R., & Dubilier, N. (2007) · Environmental Microbiology · doi:10.1111/j.1462-2920.2007.01259.x · Cited by 146 · see citing works
The oldest records of photosynthesis
Awramik, S. M. (1992) · Photosynthesis Research · doi:10.1007/bf00039172 · Cited by 146 · see citing works
Experimental replacement of an obligate insect symbiont
Moran, N. A., & Yun, Y. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1420037112 · Cited by 145 · see citing works
Mutualism and parasitism: the yin and yang of plant symbioses
Paszkowski, U. (2006) · Current Opinion in Plant Biology · doi:10.1016/j.pbi.2006.05.008 · Cited by 140 · see citing works
Selective forces for the origin of the eukaryotic nucleus
López‐García, P., & Moreira, D. (2006) · BioEssays · doi:10.1002/bies.20413 · Cited by 138 · see citing works
Self-citationThe hybrid nature of the Eukaryota and a consilient view of life on Earth
McInerney, J. O., O’Connell, M. J., & Pisani, D. (2014) · Nature Reviews Microbiology · doi:10.1038/nrmicro3271 · Cited by 138 · see citing works
Small GTPases and the evolution of the eukaryotic cell
Jékely, G. (2003) · BioEssays · doi:10.1002/bies.10353 · Cited by 137 · see citing works
Open Questions on the Origin of Eukaryotes
López-García, P., & Moreira, D. (2015) · Trends in Ecology & Evolution · doi:10.1016/j.tree.2015.09.005 · Cited by 135 · see citing works
Self-citationFive kingdoms: an illustrated guide to the phyla of life on Earth
(1998) · Choice Reviews Online · doi:10.5860/choice.35-6205 · Cited by 132 · see citing works
Lokiarchaeon is hydrogen dependent
Sousa, F. L., Neukirchen, S., Allen, J. F., Lane, N. J., & Martin, W. F. (2016) · Nature Microbiology · doi:10.1038/nmicrobiol.2016.34 · Cited by 129 · see citing works
Multiple secondary origins of the anaerobic lifestyle in eukaryotes
Martin Embley, T. (2006) · Philosophical Transactions of the Royal Society B: Biological Sciences · doi:10.1098/rstb.2006.1844 · Cited by 124 · see citing works
Wegener, G., Krukenberg, V., Ruff, S. E., Kellermann, M. Y., & Knittel, K. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.00046 · Cited by 124 · see citing works
From archaeon to eukaryote: the evolutionary dark ages of the eukaryotic cell
Martijn, J., & Ettema, T. J. G. (2013) · Biochemical Society Transactions · doi:10.1042/bst20120292 · Cited by 123 · see citing works
Cavalier‐Smith, T. (1989) · Nature · doi:10.1038/339100a0 · Cited by 119 · see citing works
Overmann, J., & van Gemerden, H. (2000) · FEMS Microbiology Reviews · doi:10.1111/j.1574-6976.2000.tb00560.x · Cited by 119 · see citing works
Birth of a W sex chromosome by horizontal transfer of Wolbachia bacterial symbiont genome
Leclercq, S., Thézé, J., Chebbi, M. A., Giraud, I., Moumen, B., Ernenwein, L., Grève, P., Gilbert, C., & Cordaux, R. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1608979113 · Cited by 118 · see citing works
Lin, Z., Nei, M., & Mā, H. (2007) · Nucleic Acids Research · doi:10.1093/nar/gkm921 · Cited by 113 · see citing works
Bacterial gene import and mesophilic adaptation in archaea
López‐García, P., Zivanovic, Y., Deschamps, P., & Moreira, D. (2015) · Nature Reviews Microbiology · doi:10.1038/nrmicro3485 · Cited by 112 · see citing works
Self-citationGiant viruses and the origin of modern eukaryotes
Forterre, P., & Gaïa, M. (2016) · Current Opinion in Microbiology · doi:10.1016/j.mib.2016.02.001 · Cited by 110 · see citing works
Kozubal, M. A., Romine, M. F., Jennings, R. D., Jay, Z. J., Tringe, S. G., Rusch, D. B., Beam, J. P., McCue, L. A., & Inskeep, W. P. (2012) · The ISME Journal · doi:10.1038/ismej.2012.132 · Cited by 109 · see citing works
Another acquisition of a primary photosynthetic organelle is underway in Paulinella chromatophora.
Nakayama, T., & Ishida, K. (2009) · Current Biology · doi:10.1016/j.cub.2009.02.043 · Cited by 103 · see citing works
The Origin and Evolution of The Cell
(1993) · doi:10.1142/1909 · Cited by 101 · see citing works
Archaeal “Dark Matter” and the Origin of Eukaryotes
Williams, T. A., & Embley, T. M. (2014) · Genome Biology and Evolution · doi:10.1093/gbe/evu031 · Cited by 100 · see citing works
Deschamps, P., Zivanovic, Y., Moreira, D., Rodríguez‐Valera, F., & López‐García, P. (2014) · Genome Biology and Evolution · doi:10.1093/gbe/evu127 · Cited by 100 · see citing works
Self-citationTracing the Archaeal Origins of Eukaryotic Membrane-Trafficking System Building Blocks.
Klinger, C. M., Spang, A., Dacks, J., & Ettema, T. (2016) · Molecular biology and evolution · doi:10.1093/molbev/msw034 · Cited by 99 · see citing works
Phylogenomic analysis of lipid biosynthetic genes of Archaea shed light on the ‘lipid divide’
Villanueva, L., Stefan Schouten, A., & Damsté, J. S. S. (2016) · Environmental Microbiology · doi:10.1111/1462-2920.13361 · Cited by 98 · see citing works
Cellular cooperation: insights from microbes
Celiker, H., & Gore, J. (2012) · Trends in Cell Biology · doi:10.1016/j.tcb.2012.08.010 · Cited by 94 · see citing works
What Does It Take to Evolve A Nitrogen-Fixing Endosymbiosis?
Geurts, R., Xiao, T. T., & Reinhold‐Hurek, B. (2016) · Trends in Plant Science · doi:10.1016/j.tplants.2016.01.012 · Cited by 94 · see citing works
Becker, K. W., Elling, F. J., Yoshinaga, M. Y., Söllinger, A., Urich, T., & Hinrichs, K. (2016) · Applied and Environmental Microbiology · doi:10.1128/aem.00772-16 · Cited by 91 · see citing works
Unusual marine unicellular symbiosis with the nitrogen-fixing cyanobacterium UCYN-A
Zehr, J., Shilova, I., Farnelid, H., Muñoz-Marín, M. D. C., & Turk-Kubo, K. (2016) · Nature Microbiology · doi:10.1038/nmicrobiol.2016.214 · Cited by 90 · see citing works
Advances in Time Estimation Methods for Molecular Data
Kumar, S., & Hedges, S. B. (2016) · Molecular Biology and Evolution · doi:10.1093/molbev/msw026 · Cited by 88 · see citing works
Evolutionary Transitions to Multicellular Life
Ruiz‐Trillo, I., & Nedelcu, A. M. (2015) · Advances in marine genomics · doi:10.1007/978-94-017-9642-2 · Cited by 87 · see citing works
Biddle, J. F., White, J. R., Teske, A., & House, C. H. (2011) · The ISME Journal · doi:10.1038/ismej.2010.199 · Cited by 85 · see citing works
Müller, M. (1975) · Annual Review of Microbiology · doi:10.1146/annurev.mi.29.100175.002343 · Cited by 85 · see citing works
Environmental Breviatea harbour mutualistic Arcobacter epibionts
Hamann, E., Gruber‐Vodicka, H. R., Kleiner, M., Tegetmeyer, H. E., Riedel, D., Littmann, S., Chen, J., Milucka, J., Viehweger, B., Becker, K. W., et al. (2016) · Nature · doi:10.1038/nature18297 · Cited by 84 · see citing works
Williams, T. A., Embley, T. M., & Heinz, E. (2011) · PLoS ONE · doi:10.1371/journal.pone.0021080 · Cited by 83 · see citing works
Comment on "The 1.2-Megabase Genome Sequence of Mimivirus"
Moreira, D., & López‐García, P. (2005) · Science · doi:10.1126/science.1110820 · Cited by 83 · see citing works
Self-citationWheat embryo mitochondrial 18S ribosomal RNA: evidence for its prokaryotic nature
Bonen, L., Cunningham, R. S., Gray, M. W., & Doolittle, W. F. (1977) · Nucleic Acids Research · doi:10.1093/nar/4.3.663 · Cited by 80 · see citing works
Novel mitochondrion‐related organelles in the anaerobic amoeba Mastigamoeba balamuthi
Gill, E. E., Trivino, S. D., Barberà, M. J., Silberman, J. D., Stechmann, A., Gaston, D., Tamaš, I., & Roger, A. J. (2007) · Molecular Microbiology · doi:10.1111/j.1365-2958.2007.05979.x · Cited by 76 · see citing works
Rethinking “mutualism” in diverse host‐symbiont communities
Mushegian, A. A., & Ebert, D. (2015) · BioEssays · doi:10.1002/bies.201500074 · Cited by 76 · see citing works
Paleobiological Perspectives on Early Microbial EvolutionPreprint
Knoll, A. H. (2015) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a018093 · Cited by 74 · see citing works
Methods for unveiling cryptic microbial partnerships in nature
Orphan, V. J. (2009) · Current Opinion in Microbiology · doi:10.1016/j.mib.2009.04.003 · Cited by 73 · see citing works
The Early Eukaryotic Fossil Record
Javaux, E. (2008) · Advances in experimental medicine and biology · doi:10.1007/978-0-387-74021-8_1 · Cited by 72 · see citing works
How Really Ancient Is Paulinella Chromatophora?
Delaye, L., Valadez-Cano, C., & Pérez-Zamorano, B. (2016) · PLoS Currents · doi:10.1371/currents.tol.e68a099364bb1a1e129a17b4e06b0c6b · Cited by 72 · see citing works
Noda, S., Hongoh, Y., Sato, T., & Ohkuma, M. (2009) · BMC Evolutionary Biology · doi:10.1186/1471-2148-9-158 · Cited by 68 · see citing works
Edgcomb, V. P., Leadbetter, E. R., Bourland, W. A., Beaudoin, D., & Bernhard, J. M. (2011) · Frontiers in Microbiology · doi:10.3389/fmicb.2011.00055 · Cited by 67 · see citing works
Cavalier‐Smith, T. (2014) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a016006 · Cited by 66 · see citing works
Archaeal ancestors of eukaryotes: not so elusive any more
Koonin, E. V. (2015) · BMC Biology · doi:10.1186/s12915-015-0194-5 · Cited by 63 · see citing works
Endosymbiosis and its implications for evolutionary theory
O’Malley, M. A. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1421389112 · Cited by 63 · see citing works
Time‐dependent estimates of molecular evolutionary rates: evidence and causes
Ho, S. Y. W., Duchêne, S., Molak, M., & Shapiro, B. (2015) · Molecular Ecology · doi:10.1111/mec.13450 · Cited by 62 · see citing works
Keeling, P. J. (2014) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a016196 · Cited by 57 · see citing works
Jørgensen, S. L., Thorseth, I. H., Pedersen, R. B., Baumberger, T., & Schleper, C. (2013) · Frontiers in Microbiology · doi:10.3389/fmicb.2013.00299 · Cited by 53 · see citing works
Response to Comment on "The 1.2-Megabase Genome Sequence of Mimivirus"
Ogata, H., Abergel, C., Raoult, D., & Claverie, J. (2005) · Science · doi:10.1126/science.1111195 · Cited by 51 · see citing works
Sharpe*, S. C., Eme*, L., Brown, M. W., & Roger, A. J. (2015) · Advances in Marine Genomics · doi:10.1007/978-94-017-9642-2_1 · Cited by 49 · see citing works
Self-citationEdgcomb, V. P., Breglia, S. A., Naoji Yubuki, A., Beaudoin, D., Patterson, D. J., Leander, B. S., & Bernhard, J. M. (2010) · The ISME Journal · doi:10.1038/ismej.2010.121 · Cited by 49 · see citing works
Biodiversity: molecular biological domains, symbiosis and kingdom origins
Margulis, L. (1992) · Biosystems · doi:10.1016/0303-2647(92)90045-z · Cited by 44 · see citing works
Liu, Z., Müller, J., Li, T., Alvey, R. M., Vogl, K., Frigaard, N., Rockwell, N. C., Boyd, E. S., Tomsho, L. P., Schuster, S. C., et al. (2013) · Genome biology · doi:10.1186/gb-2013-14-11-r127 · Cited by 44 · see citing works
Hedlund, B. P., Dodsworth, J. A., Cole, J. K., & Panosyan, H. (2013) · Antonie van Leeuwenhoek · doi:10.1007/s10482-013-9927-z · Cited by 41 · see citing works
A New Era of Methanogenesis Research
Lever, M. A. (2016) · Trends in Microbiology · doi:10.1016/j.tim.2015.12.005 · Cited by 37 · see citing works
The Viral Eukaryogenesis Hypothesis
Bell, P. (2009) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.2009.04994.x · Cited by 35 · see citing works
A life history view of mutualistic viral symbioses: quantity or quality for cooperation?
Bao, X., & Roossinck, M. J. (2013) · Current Opinion in Microbiology · doi:10.1016/j.mib.2013.05.007 · Cited by 32 · see citing works
Sure facts and open questions about the origin and evolution of photosynthetic plastids
Moreira, D., & Philippe, H. (2001) · Research in Microbiology · doi:10.1016/s0923-2508(01)01260-8 · Cited by 32 · see citing works
Self-citationMargulis, L., & Guerrero, R. (1991) · PubMed · Cited by 29 · see citing works
Are There Rab GTPases in Archaea?
Surkont, J., & Pereira‐Leal, J. B. (2016) · Molecular Biology and Evolution · doi:10.1093/molbev/msw061 · Cited by 29 · see citing works
Moreira, D., & Deschamps, P. (2014) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a016014 · Cited by 28 · see citing works
Self-citation
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- Madigan MT Martinko JM Bender KS Buckley DH Stahl DA Brock T Brock biology of microorganisms 14th edition 2014 Benjamin Cummings San Francisco, California, U.S.A
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BlobToolKit – Interactive Quality Assessment of Genome Assemblies
CHALLIS, R. J., Richards, E., Rajan, J., Cochrane, G., & Blaxter, M. (2020) · G3 Genes Genomes Genetics · doi:10.1534/g3.119.400908 · Cited by 2,581 · see citing works
The Origin and Diversification of Mitochondria
Roger, A. J., Muñoz-Gómez, S. A., & Kamikawa, R. (2017) · Current Biology · doi:10.1016/j.cub.2017.09.015 · Cited by 1,142 · see citing works
Soil protists: a fertile frontier in soil biology research.
Geisen, S., Mitchell, E., Adl, S., Bonkowski, M., Dunthorn, M., Ekelund, F., Fernández, L. D., Jousset, A., Krashevska, V., Singer, D., et al. (2018) · FEMS Microbiology Reviews · doi:10.1093/femsre/fuy006 · Cited by 633 · see citing works
Probiotics, Prebiotics, and Phytogenic Substances for Optimizing Gut Health in Poultry
Shehata, A. A., Yalçın, S., Latorre, J. D., Basiouni, S., Attia, Y. A., El‐Wahab, A. A., Visscher, C., El-Seedi, H. R., Huber, C., Hafez, H. M., et al. (2022) · Microorganisms · doi:10.3390/microorganisms10020395 · Cited by 289 · see citing works
Origin of viruses: primordial replicators recruiting capsids from hosts
Krupovìč, M., Dolja, V. V., & Koonin, E. V. (2019) · Nature Reviews Microbiology · doi:10.1038/s41579-019-0205-6 · Cited by 213 · see citing works
Spang, A., Stairs, C. W., Dombrowski, N., Eme, L., Lombard, J., Caceres, E. F., Greening, C., Baker, B. J., & Ettema, T. J. G. (2019) · Nature Microbiology · doi:10.1038/s41564-019-0406-9 · Cited by 200 · see citing works
Self-citationMethanogens: pushing the boundaries of biology
Buan, N. R. (2018) · Emerging Topics in Life Sciences · doi:10.1042/etls20180031 · Cited by 204 · see citing works
The Syntrophy hypothesis for the origin of eukaryotes revisited
López-García, P., & Moreira, D. (2020) · Nature Microbiology · doi:10.1038/s41564-020-0710-4 · Cited by 201 · see citing works
Self-citationThe planktonic protist interactome: where do we stand after a century of research?
Bjorbækmo, M. F. M., Evenstad, A., Røsæg, L. L., Krabberød, A. K., & Logares, R. (2019) · The ISME Journal · doi:10.1038/s41396-019-0542-5 · Cited by 193 · see citing works
Driscoll, T., Verhoeve, V. I., Guillotte, M. L., Lehman, S. S., Rennoll, S. A., Beier‐Sexton, M., Rahman, M. S., Azad, A. F., & Gillespie, J. J. (2017) · mBio · doi:10.1128/mbio.00859-17 · Cited by 131 · see citing works
ATP synthase evolution on a cross-braced dated tree of life
Mahendrarajah, T. A., Moody, E. R. R., Schrempf, D., Szánthó, L. L., Dombrowski, N., Davín, A. A., Pisani, D., Donoghue, P. C. J., Szöllősi, G. J., Williams, T. A., et al. (2023) · Nature Communications · doi:10.1038/s41467-023-42924-w · Cited by 86 · see citing works
“12 – 17, Supplementary Data 10).”
BackgroundEctosymbiotic bacteria at the origin of magnetoreception in a marine protist
Monteil, C. L., Vallenet, D., Menguy, N., Benzerara, K., Barbe, V., Fouteau, S., Cruaud, C., Floriani, M., Viollier, É., Adryanczyk‐Perrier, G., et al. (2019) · Nature Microbiology · doi:10.1038/s41564-019-0432-7 · Cited by 91 · see citing works
Self-citationEvolutionary origins and specialisation of membrane transport
Dacks, J. B., & Field, M. C. (2018) · Current Opinion in Cell Biology · doi:10.1016/j.ceb.2018.06.001 · Cited by 72 · see citing works
Origin and Evolution of Polycyclic Triterpene Synthesis
Santana‐Molina, C., Rivas‐Marín, E., Rojas, A. M., & Devos, D. P. (2020) · Molecular Biology and Evolution · doi:10.1093/molbev/msaa054 · Cited by 72 · see citing works
Waterworth, S. C., Flórez, L. V., Rees, E. R., Hertweck, C., Kaltenpoth, M., & Kwan, J. C. (2020) · mBio · doi:10.1128/mbio.02430-19 · Cited by 69 · see citing works
Magnetoreception in Microorganisms
Monteil, C. L., & Lefèvre, C. T. (2019) · Trends in Microbiology · doi:10.1016/j.tim.2019.10.012 · Cited by 68 · see citing works
Cell Communications among Microorganisms, Plants, and Animals: Origin, Evolution, and Interplays
Combarnous, Y., & Nguyen, T. M. D. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21218052 · Cited by 68 · see citing works
COHEN, P. A., & Kodner, R. B. (2021) · Trends in Ecology & Evolution · doi:10.1016/j.tree.2021.11.005 · Cited by 65 · see citing works
Endosymbiosis before eukaryotes: mitochondrial establishment in protoeukaryotes
Zachar, I., & Boza, G. (2020) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-020-03462-6 · Cited by 64 · see citing works
LEA Proteins and the Evolution of the WHy Domain
Mertens, J., Aliyu, H., & Cowan, D. A. (2018) · Applied and Environmental Microbiology · doi:10.1128/aem.00539-18 · Cited by 61 · see citing works
Growing Ungrowable Bacteria: Overview and Perspectives on Insect Symbiont Culturability
Masson, F., & Lemaître, B. (2020) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00089-20 · Cited by 59 · see citing works
Fagorzi, C., Ilie, A., Decorosi, F., Cangioli, L., Viti, C., Mengoni, A., & diCenzo, G. C. (2020) · Genome Biology and Evolution · doi:10.1093/gbe/evaa221 · Cited by 59 · see citing works
Breath-giving cooperation: critical review of origin of mitochondria hypotheses
Zachar, I., & Szathmáry, E. (2017) · Biology Direct · doi:10.1186/s13062-017-0190-5 · Cited by 59 · see citing works
From endosymbiosis to holobionts: Evaluating a conceptual legacy
O’Malley, M. A. (2017) · Journal of Theoretical Biology · doi:10.1016/j.jtbi.2017.03.008 · Cited by 57 · see citing works
Gene gain facilitated endosymbiotic evolution of Chlamydiae
Dharamshi, J. E., Köstlbacher, S., Schön, M. E., Collingro, A., Ettema, T. J. G., & Horn, M. (2023) · Nature Microbiology · doi:10.1038/s41564-022-01284-9 · Cited by 57 · see citing works
The virome of the last eukaryotic common ancestor and eukaryogenesis
Krupovìč, M., Dolja, V. V., & Koonin, E. V. (2023) · Nature Microbiology · doi:10.1038/s41564-023-01378-y · Cited by 55 · see citing works
Evolution of mitochondrial protein import – lessons from trypanosomes
Schneider, A. (2019) · Biological chemistry · doi:10.1515/hsz-2019-0444 · Cited by 49 · see citing works
Sun, P., Wang, Y., Huang, X., Huang, B., & Wang, L. (2022) · Water Research · doi:10.1016/j.watres.2022.118274 · Cited by 53 · see citing works
Evolution of biosynthetic diversity
Michael, A. J. (2017) · Biochemical Journal · doi:10.1042/bcj20160823 · Cited by 49 · see citing works
Genome size evolution in the Archaea
Kellner, S., Spang, A., Offre, P., Szöllősi, G. J., Petitjean, C., & Williams, T. A. (2018) · Emerging Topics in Life Sciences · doi:10.1042/etls20180021 · Cited by 48 · see citing works
Eukaryogenesis, a syntrophy affair
López‐García, P., & Moreira, D. (2019) · Nature Microbiology · doi:10.1038/s41564-019-0495-5 · Cited by 46 · see citing works
Self-citationThe symbiotic origin of the eukaryotic cell
López‐García, P., & Moreira, D. (2023) · Comptes Rendus Biologies · doi:10.5802/crbiol.118 · Cited by 45 · see citing works
Self-citationArchaeal Origins of Eukaryotic Cell and Nucleus
Baluška, F., & Lyons, S. L. (2021) · Biosystems · doi:10.1016/j.biosystems.2021.104375 · Cited by 43 · see citing works
Lafuente, E., Lürig, M., Rövekamp, M., Matthews, B., Buser, C. C., Vorburger, C., & Räsänen, K. (2021) · Frontiers in Ecology and Evolution · doi:10.3389/fevo.2021.748212 · Cited by 42 · see citing works
Henriquez, F. L., Mooney, R., Bandel, T., Giammarini, E., Zeroual, M., Fiori, P. L., Margarita, V., Rappelli, P., & Dessì, D. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.616213 · Cited by 42 · see citing works
Čechová, J., Lýsek, J., Bartas, M., & Brázda, V. (2017) · Bioinformatics · doi:10.1093/bioinformatics/btx729 · Cited by 40 · see citing works
Cultured Asgard Archaea Shed Light on Eukaryogenesis
López‐García, P., & Moreira, D. (2020) · Cell · doi:10.1016/j.cell.2020.03.058 · Cited by 40 · see citing works
Self-citationWhat are the principles that govern life?
Gómez‐Márquez, J. (2020) · Communicative & Integrative Biology · doi:10.1080/19420889.2020.1803591 · Cited by 38 · see citing works
Symbiogenesis, gradualism, and mitochondrial energy in eukaryote origin
Martin, W. F. (2017) · Periodicum Biologorum · doi:10.18054/pb.v119i3.5694 · Cited by 38 · see citing works
Joo, S., Wang, M. H., Lui, G., Lee, J., Barnas, A. F., Kim, E., Sudek, S., Worden, A. Z., & Lee, J. (2018) · BMC Biology · doi:10.1186/s12915-018-0605-5 · Cited by 38 · see citing works
Bellinger, M. R., Wei, J., Hartmann, U. H., Cadiou, H., Michael Winklhofer, A., & Banks, M. A. (2022) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2108655119 · Cited by 36 · see citing works
Host Adaptation in Legionellales Is 1.9 Ga, Coincident with Eukaryogenesis
Hugoson, E., Guliaev, A. S., Ammunét, T., & Guy, L. (2022) · Molecular Biology and Evolution · doi:10.1093/molbev/msac037 · Cited by 36 · see citing works
The Land–Sea Connection: Insights Into the Plant Lineage from a Green Algal Perspective
Bachy, C., Wittmers, F., Muschiol, J., Hamilton, M., Henrissat, B., & Worden, A. Z. (2022) · Annual Review of Plant Biology · doi:10.1146/annurev-arplant-071921-100530 · Cited by 35 · see citing works
Speijer, D., Hammond, M., & Lukeš, J. (2020) · mBio · doi:10.1128/mbio.00955-20 · Cited by 30 · see citing works
A novel quinone biosynthetic pathway illuminates the evolution of aerobic metabolism
Elling, F. J., Pierrel, F., Chobert, S.-C., Abby, S. S., Evans, T. W., Reveillard, A., Pélosi, L., Schnoebelen, J., Hemingway, J., Boumendjel, A., et al. (2025) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2421994122 · Cited by 29 · see citing works
Morphophysiological, structural, and metabolic aspects of microalgae
Queiroz, M. I., Vieira, J. G., & Maroneze, M. M. (2020) · Elsevier eBooks · doi:10.1016/b978-0-12-818536-0.00002-6 · Cited by 27 · see citing works
Lei, L., & Burton, Z. F. (2022) · Life · doi:10.3390/life12020252 · Cited by 27 · see citing works
Adaptation and Exaptation: From Small Molecules to Feathers
Frenkel‐Pinter, M., Petrov, A. S., Matange, K., Travisano, M., Glass, J. B., & Williams, L. D. (2022) · Journal of Molecular Evolution · doi:10.1007/s00239-022-10049-1 · Cited by 24 · see citing works
Non-pollen palynomorphs in deep time: unravelling the evolution of early eukaryotes
Agić, H., & COHEN, P. A. (2021) · Geological Society London Special Publications · doi:10.1144/sp511-2020-223 · Cited by 22 · see citing works
Dunn, C. D. (2017) · Journal of Molecular Evolution · doi:10.1007/s00239-017-9809-5 · Cited by 22 · see citing works
Role of stellar physics in regulating the critical steps for life
Lingam, M., & Loeb, A. (2019) · International Journal of Astrobiology · doi:10.1017/s1473550419000016 · Cited by 25 · see citing works
Rappaport, H. B., & Oliverio, A. (2024) · Genome Biology and Evolution · doi:10.1093/gbe/evae160 · Cited by 19 · see citing works
Evolving Perspective on the Origin and Diversification of Cellular Life and the Virosphere
Spang, A., Mahendrarajah, T., Offre, P., & Stairs, C. W. (2022) · Genome Biology and Evolution · doi:10.1093/gbe/evac034 · Cited by 19 · see citing works
Responses of unicellular predators to cope with the phototoxicity of photosynthetic prey
Uzuka, A., Kobayashi, Y., Onuma, R., Hirooka, S., Kanesaki, Y., Yoshikawa, H., Fujiwara, T., & Miyagishima, S. (2019) · Nature Communications · doi:10.1038/s41467-019-13568-6 · Cited by 18 · see citing works
Coevolution Dynamics of Beneficial and Pathogenic Microbes in Plant–Microbe Interactions
Adedayo, A. A., & Olorunkosebi, M. T. (2025) · Biology · doi:10.3390/biology14111505 · Cited by 18 · see citing works
A great ape perspective on the origins and evolution of human viruses
Calvignac‐Spencer, S., Düx, A., Gogarten, J. F., Leendertz, F. H., & Patrono, L. V. (2021) · Advances in virus research · doi:10.1016/bs.aivir.2021.06.001 · Cited by 18 · see citing works
Origin and Early Evolution of the Eukaryotes: Perspectives from the Fossil Record
Agić, H. (2021) · Advances in astrobiology and biogeophysics · doi:10.1007/978-3-030-81039-9_11 · Cited by 18 · see citing works
He, L., & Maheshwari, A. (2022) · Current Pediatric Reviews · doi:10.2174/1573396319666221221110728 · Cited by 18 · see citing works
Chevrier, D. M., Juhin, A., Menguy, N., Bolzoni, R., Rodriguez, P. E. D. S., Kojadinovic, M., Paterson, G. A., Belkhou, R., Williams, W., Skouri‐Panet, F., et al. (2023) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2216975120 · Cited by 18 · see citing works
Common ancestry of eukaryotes and Asgardarchaeota: Three, two or more cellular domains of life?
Giulio, M. D. (2019) · Journal of Theoretical Biology · doi:10.1016/j.jtbi.2019.110083 · Cited by 16 · see citing works
Addison, S. L., Armstrong, C., Wigley, K., Hartley, R. J. L., & Wakelin, S. A. (2023) · Environmental Microbiome · doi:10.1186/s40793-023-00507-8 · Cited by 15 · see citing works
Sato, N. (2017) · Journal of Theoretical Biology · doi:10.1016/j.jtbi.2017.08.028 · Cited by 15 · see citing works
Gaïa, M., Cunha, V. D., & Forterre, P. (2018) · Grand challenges in biology and biotechnology · doi:10.1007/978-3-319-69078-0_3 · Cited by 14 · see citing works
Marine Protists: A Hitchhiker’s Guide to their Role in the Marine Microbiome
Bachy, C., Hehenberger, E., Ling, Y.-C., Needham, D. M., Strauss, J., Wilken, S., & Worden, A. Z. (2022) · The microbiomes of humans, animals, plants, and the environment · doi:10.1007/978-3-030-90383-1_4 · Cited by 13 · see citing works
Microbial eukaryotes in the suboxic chemosynthetic ecosystem of Movile Cave, Romania
Reboul, G., Moreira, D., Bertolino, P., Hillebrand‐Voiculescu, A., & López‐García, P. (2019) · Environmental Microbiology Reports · doi:10.1111/1758-2229.12756 · Cited by 13 · see citing works
Self-citationCollens, A. B., & Katz, L. A. (2020) · Journal of Heredity · doi:10.1093/jhered/esaa060 · Cited by 13 · see citing works
The Porifera microeukaryome: Addressing the neglected associations between sponges and protists
Nascimento-Silva, G., Hardoim, C. C. P., & Custódio, M. R. (2022) · Microbiological Research · doi:10.1016/j.micres.2022.127210 · Cited by 13 · see citing works
Cellular compartmentation follows rules: The Schnepf theorem, its consequences and exceptions
Moog, D., & Maier, U. (2017) · Bioessays · doi:10.1002/bies.201700030 · Cited by 10 · see citing works
Mikhailovsky, G. E. (2018) · Entropy · doi:10.3390/e20070533 · Cited by 12 · see citing works
Synthetic Mutualism and the Intervention Dilemma
Denton, J. A., & Gokhale, C. S. (2019) · Life · doi:10.3390/life9010015 · Cited by 13 · see citing works
Amadei, S. S., & Notario, V. (2020) · Antibiotics · doi:10.3390/antibiotics9090580 · Cited by 12 · see citing works
Physical connections: prokaryotes parasitizing their kin.
López-García, P., & Moreira, D. (2020) · Environmental Microbiology Reports · doi:10.1111/1758-2229.12910 · Cited by 11 · see citing works
Self-citationL-ascorbic acid and the evolution of multicellular eukaryotes
Edgar, J. A. (2019) · Journal of Theoretical Biology · doi:10.1016/j.jtbi.2019.06.001 · Cited by 11 · see citing works
Adapting to Environmental Heterogeneity: Selection and Radiation
Desmond, H. (2021) · Biological Theory · doi:10.1007/s13752-021-00373-y · Cited by 11 · see citing works
Prokaryotic and Mitochondrial Lipids: A Survey of Evolutionary Origins
Rappocciolo, E., & Stiban, J. (2019) · Advances in experimental medicine and biology · doi:10.1007/978-3-030-21162-2_2 · Cited by 10 · see citing works
Serial Endosymbiosis Theory: From biology to astronomy and back to the origin of life
Slijepčević, P. (2021) · Biosystems · doi:10.1016/j.biosystems.2021.104353 · Cited by 10 · see citing works
Mitochondrial Dynamics during Development
Maheshwari, A., He, L., & Tronstad, K. J. (2023) · Newborn · doi:10.5005/jp-journals-11002-0053 · Cited by 10 · see citing works
Mitochondria ensure immune surveillance by retro-communication with the nucleus
Rigon, M., Townley, A. R., & Campanella, M. (2021) · Cell Metabolism · doi:10.1016/j.cmet.2021.04.013 · Cited by 10 · see citing works
The planktonic protist interactome: where do we stand after a century of research?Preprint
Bjorbækmo, M. F. M., Evenstad, A., Røsæg, L. L., Krabberød, A. K., & Logares, R. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/587352 · Cited by 10 · see citing works
Xu, J., Wang, Y., Liu, L., Wang, X., Xiao, S., Chen, J., Jiao, N., & Zheng, Q. (2024) · The Science of The Total Environment · doi:10.1016/j.scitotenv.2024.174883 · Cited by 9 · see citing works
A genomic catalog of Earth’s bacterial and archaeal symbionts
Villada, J. C., Vasquez, Y. M., Szabó, G., Whittaker-Walker, E., Romero, M. F., Qin, S., Varghese, N. J., Eloe‐Fadrosh, E. A., Kyrpides, N. C., Stepanauskas, R., et al. (2026) · Nature Biotechnology · doi:10.1038/s41587-026-03213-1 · Cited by 9 · see citing works
Mrp and SufT, Two Bacterial Homologs of Eukaryotic CIA Factors Involved in Fe-S Clusters Biogenesis
Aubert, C., Mandin, P., & Py, B. (2023) · Inorganics · doi:10.3390/inorganics11110431 · Cited by 9 · see citing works
Understanding eukaryotic chromosome segregation from a comparative biology perspective
Oliferenko, S. (2018) · Journal of Cell Science · doi:10.1242/jcs.203653 · Cited by 9 · see citing works
Brunoro, G. V. F., Menna‐Barreto, R. F. S., Garcia-Gomes, A. D. S., Martins, C. B., Lima, D. B., Carvalho, P. C., Teixeira‐Ferreira, A., Trugilho, M. R. O., Perales, J., Schwämmle, V., et al. (2019) · Protist · doi:10.1016/j.protis.2019.125698 · Cited by 9 · see citing works
Moreira, V. A., Cravo-Laureau, C., de Carvalho, A. C. B., Baldy, A., Bidone, E., Sabadini-Santos, E., & Duran, R. (2024) · Science of the Total Environment · doi:10.1016/j.scitotenv.2024.174341 · Cited by 6 · see citing works
The selectionist rationale for evolutionary progress
Desmond, H. (2021) · Biology & Philosophy · doi:10.1007/s10539-021-09806-1 · Cited by 8 · see citing works
MYCORRHIZA AND LICHENS AS TWO MODELS OF FUNGAL SYMBIOSIS
Elkhateeb, W. A., Somasekhar, T., Thomas, P. W., Wen, T., & Daba, G. M. (2021) · Journal of Microbiology Biotechnology and Food Sciences · doi:10.15414/jmbfs.4644 · Cited by 8 · see citing works
The Origin of Life and Cellular Systems: A Continuum from Prebiotic Chemistry to Biodiversity
Gómez‐Márquez, J. (2025) · Life · doi:10.3390/life15111745 · Cited by 9 · see citing works
Lovejoy, D. A., & Hogg, D. W. (2020) · BioEssays · doi:10.1002/bies.202000039 · Cited by 7 · see citing works
How mitochondria showcase evolutionary mechanisms and the importance of oxygen
Speijer, D. (2023) · BioEssays · doi:10.1002/bies.202300013 · Cited by 7 · see citing works
Genesis of ectosymbiotic features based on commensalistic syntrophy
Krishnan, N., Csiszár, V., Móri, T. F., & Garay, J. (2024) · Scientific Reports · doi:10.1038/s41598-023-47211-8 · Cited by 6 · see citing works
Is an archaeon the ancestor of eukaryotes?
Spang, A. (2022) · Environmental Microbiology · doi:10.1111/1462-2920.16323 · Cited by 6 · see citing works
Ponce-Toledo, R. I., Moreira, D., López-García, P., & Deschamps, P. (2025) · Molecular Biology and Evolution · doi:10.1093/molbev/msaf167 · Cited by 5 · see citing works
Self-citationLeaffooted bugs enrich local soil with their horizontally acquired symbiont
Parajuli, B. S., Teodosio, J., & Ravenscraft, A. (2026) · Frontiers in Microbiology · doi:10.3389/fmicb.2026.1737071 · Cited by 5 · see citing works
Economic development and the death of the free market
Fix, B. (2021) · Evolutionary and Institutional Economics Review · doi:10.1007/s40844-021-00224-2 · Cited by 5 · see citing works
Diversity of algae and their biotechnological potential
Gilmour, D. J. (2023) · Advances in microbial physiology/Advances in Microbial Physiology · doi:10.1016/bs.ampbs.2023.02.001 · Cited by 5 · see citing works
Astrovirology, Astrobiology, Artificial Intelligence: Extra-Solar System Investigations
Shapshak, P. (2019) · Springer eBooks · doi:10.1007/978-3-030-29022-1_20 · Cited by 5 · see citing works
Mondal, S., Kumar, S., & Sankaranarayanan, R. (2025) · Biochemistry · doi:10.1021/acs.biochem.5c00488 · Cited by 4 · see citing works
Can a microbial community become an evolutionary individual?
Salazar, A., & Mitri, S. (2025) · Current Opinion in Microbiology · doi:10.1016/j.mib.2025.102596 · Cited by 4 · see citing works
Proulex, G. C. R., Meade, M. J., Manoylov, K. M., & Cahoon, A. B. (2021) · Plants · doi:10.3390/plants10030576 · Cited by 4 · see citing works
- Authors
- López-García, P., Eme, L., & Moreira, D.
- Affiliations
- Dalhousie University (CA)
- Université Paris-Sud (FR)
- Venue
- Journal of Theoretical Biology
- Publisher
- Elsevier BV
- Published
- 2017-12
- Volume
- 434
- Pages
- 20-33
- ISSN
- 0022-5193 (ISSN-L)
- PMC
- PMC5638015
- OpenAlex
- W2592590328
- Cited by
- 154
- References
- 206
- Citations by year
- 2026: 8 · 2025: 14 · 2024: 12 · 2023: 14 · 2022: 15 · 2021: 18 · 2020: 24 · 2019: 24 · 2018: 13 · 2017: 12
- FWCI
- 8.16
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Journal of Theoretical Biology (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- European Research Council Advanced (322669)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protist diversity and phylogeny
- Physical Sciences › Physics and Astronomy › Astronomy and Astrophysics › Origins and Evolution of Life
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
- Keywords
- symbiosis, eukaryotic origin, symbiogenesis, Lynn Margulis, endosymbiotic origin of mitochondria, chloroplast origin, eukaryotic organelles, microbial mats, sediment microbial communities, archaea, phylogenomics, eukaryotic evolution
- MeSH terms
- Eukaryotic Cells, Biological Evolution, Symbiosis, Ecosystem, Eukaryota, Microbiota
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