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Extensive Recovery of Embryonic Enhancer and Gene Memory Stored in Hypomethylated Enhancer DNA
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The reacquisition of somatic fate may be the result of persisting epigenetic memory at enhancers, which is not erased until the SP, as well as persistent expression of some fibroblast genes.
“This may be the result of persisting epigenetic memory at enhancers (Jadhav et al., 2019), which notably we find is not erased until the SP, as well as persistent expression of some fibroblast genes.”
From Multi-omic rejuvenation of human cells by maturation phase transient reprogramming (2022) · cites this paper as Jadhav et al., 2019
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“Active enhancers display accessible chromatin, transcription factor binding, and the histone marks H3K4me1 and H3K27ac, which together associate best with expressed genes (Barski et al., 2007; Heintzman et al., 2007).”
A unique chromatin signature uncovers early developmental enhancers in humans
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Charting a dynamic DNA methylation landscape of the human genome
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Notes on the role of dynamic DNA methylation in mammalian development
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Acquired Tissue-Specific Promoter Bivalency Is a Basis for PRC2 Necessity in Adult Cells
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“…histone mark H3K27me3 is associated in ESC and adult tissues with repressed promoters, especially those of morphogenetic and TF genes (Bernstein et al., 2006; Boyer et al., 2006; Jadhav et al., 2016), but H3K27me3 is typically absent at adult enhancers (Saxena et al., 2017; Zentner et al., 2011).”
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Multi-omic rejuvenation of human cells by maturation phase transient reprogramming
Gill, D., Parry, A., Santos, F., Okkenhaug, H., Todd, C. D., Hernando-Herraez, I., Stubbs, T. M., Milagre, I., & Reik, W. (2022) · eLife · doi:10.7554/elife.71624 · Cited by 185
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Metadata
- Authors
- Jadhav, U., Cavazza, A., Banerjee, K. K., Xie, H., O’Neill, N. K., Saenz-Vash, V., Herbert, Z., Madha, S., Orkin, S. H., Zhai, H., & Shivdasani, R. A.
- Venue
- Molecular Cell
- Publisher
- Elsevier BV
- Published
- 2019-05
- Volume
- 74
- Issue
- 3
- Pages
- 542-554.e5
- ISSN
- 1097-2765
- PMC
- PMC6499659
- Cited by
- 86
- References
- 11
- Language
- en
- Licence
- Funders
- NIH (R01DK081113, R01DK082889, U01DK103152, F32DK103453, K01DK113067, P50CA127003)
- DFCI-Novartis Drug Discovery Program
- Italian American Cancer Foundation
- Lind family
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