Dynamic causal modelling: A critical review of the biophysical and statistical foundations
Open accessAbstract
The goal of dynamic causal modelling (DCM) of neuroimaging data is to study experimentally induced changes in functional integration among brain regions. This requires (i) biophysically plausible and physiologically interpretable models of neuronal network dynamics that can predict distributed brain responses to experimental stimuli and (ii) efficient statistical methods for parameter estimation and model comparison. These two key components of DCM have been the focus of more than thirty methodological articles since the seminal work of Friston and colleagues published in 2003. In this paper, we provide a critical review of the current state-of-the-art of DCM. We inspect the properties of DCM in relation to the most common neuroimaging modalities (fMRI and EEG/MEG) and the specificity of inference on neural systems that can be made from these data. We then discuss both the plausibility of the underlying biophysical models and the robustness of the statistical inversion techniques. Finally, we discuss potential extensions of the current DCM framework, such as stochastic DCMs, plastic DCMs and field DCMs.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Dynamic causal models (DCMs) allow one to infer directed synaptic connections (effective connectivity) from neuroimaging or electrophysiological data.
“dynamic causal models (DCMs; for reviews see Daunizeau et al., 2011; Friston et al., 2013) allow one to infer directed synaptic connections (effective connectivity) from neuroimaging or electrophysiological data.”
From Allostatic Self-efficacy: A Metacognitive Theory of Dyshomeostasis-Induced Fatigue and Depression (2016) · cites this paper as Daunizeau et al., 2011
Section 2.1 (p. 6) describes DCMs as modelling directed effective-connectivity edges between brain regions or neuronal populations using fMRI and EEG/MEG data. The Introduction (p. 4), however, distinguishes effective connectivity—directed causal influence—from structural connectivity, which includes anatomical synaptic connections. The source therefore supports inference about directed effective connectivity, but not the claim that DCM infers synaptic connections as such. (LLM, conf=0.88)
Experimental — accuracy not yet measuredModel-based methods depend on the choice of the model and its parameters, so many different parameters need to be tested to ensure unbiased results.
“Model-based methods depend on the choice of the model and its parameters; thus many different parameters need to be tested to ensure unbiased results (112).”
From Electrophysiological source imaging: A noninvasive window to brain dynamics (2018) · cites this paper as [112]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Distributed hierarchical processing in the primate cerebral cortex
Felleman, D. J., & Van Essen, D. C. (1991) · Cerebral Cortex · doi:10.1093/cercor/1.1.1 · Cited by 7,783 · see citing works
Functional connectivity in the resting brain: a network analysis of the default mode hypothesis
Greicius, M. D., Krasnow, B., Reiss, A. L., & Menon, V. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0135058100 · Cited by 6,358 · see citing works
Friston, K. J., Harrison, L., & Penny, W. (2003) · NeuroImage · doi:10.1016/s1053-8119(03)00202-7 · Cited by 4,583 · see citing works
Bcl-2 gene promotes haemopoietic cell survival and cooperates with c-myc to immortalize pre-B cells
Vaux, D., Cory, S., & Adams, J. (1988) · Nature · doi:10.1038/335440a0 · Cited by 3,355 · see citing works
Psychophysiological and Modulatory Interactions in Neuroimaging
Friston, K. J., Buechel, C., Fink, G. R., Morris, J., Rolls, E., & Dolan, R. J. (1997) · NeuroImage · doi:10.1006/nimg.1997.0291 · Cited by 3,097 · see citing works
A practical Bayesian framework for backpropagation networks
MacKay, D. J. C. (1992) · Neural Computation · doi:10.1162/neco.1992.4.3.448 · Cited by 2,917 · see citing works
Voltage oscillations in the barnacle giant muscle fiber
Morris, C., & Lecar, H. (1981) · Biophysical Journal · doi:10.1016/s0006-3495(81)84782-0 · Cited by 2,302 · see citing works
Dynamics of pattern formation in lateral-inhibition type neural fields
Амари, Ш.-И. (1977) · Biological Cybernetics · doi:10.1007/bf00337259 · Cited by 2,086 · see citing works
(2003) · Cited by 1,680 · see citing works
Dynamics of blood flow and oxygenation changes during brain activation: the Balloon model
Buxton, R. B., Wong, E. C., & Frank, L. R. (1998) · Magnetic Resonance in Medicine · doi:10.1002/mrm.1910390602 · Cited by 1,665 · see citing works
Bayesian model selection for group studies
Stephan, K. E., Penny, W. D., Daunizeau, J., Moran, R. J., & Friston, K. J. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2009.03.025 · Cited by 1,423 · see citing works
Self-citationA Synaptically Controlled, Associative Signal for Hebbian Plasticity in Hippocampal Neurons
Magee, J. C., & Johnston, D. (1997) · Science · doi:10.1126/science.275.5297.209 · Cited by 1,303 · see citing works
Jansen, B. H., & Rit, V. G. (1995) · Biological Cybernetics · doi:10.1007/bf00199471 · Cited by 1,159 · see citing works
Glial regulation of the cerebral microvasculature
Iadecola, C., & Nedergaard, M. (2007) · Nature Neuroscience · doi:10.1038/nn2003 · Cited by 1,153 · see citing works
London, M., & Häusser, M. (2005) · Annual Review of Neuroscience · doi:10.1146/annurev.neuro.28.061604.135703 · Cited by 1,149 · see citing works
Astrocyte-mediated control of cerebral blood flow
Takano, T., Tian, G.-F., Peng, W., Lou, N., Libionka, W., Han, X., & Nedergaard, M. (2005) · Nature Neuroscience · doi:10.1038/nn1623 · Cited by 1,137 · see citing works
Dysconnection in schizophrenia: from abnormal synaptic plasticity to failures of self-monitoring
Stephan, K. E., Friston, K. J., & Frith, C. D. (2009) · Schizophrenia Bulletin · doi:10.1093/schbul/sbn176 · Cited by 1,134 · see citing works
Self-citationNonlinear Responses in fMRI: The Balloon Model, Volterra Kernels, and Other Hemodynamics
Friston, K. J., Mechelli, A., Turner, R., & Price, C. J. (2000) · NeuroImage · doi:10.1006/nimg.2000.0630 · Cited by 1,131 · see citing works
The dynamic brain: from spiking neurons to neural masses and cortical fields
Deco, G., Jirsa, V. K., Robinson, P. A., Breakspear, M., & Friston, K. (2008) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1000092 · Cited by 1,084 · see citing works
The functional logic of cortical connections
Zeki, S., & Shipp, S. (1988) · Nature · doi:10.1038/335311a0 · Cited by 1,067 · cited 2× · see citing works
“, the anatomical layout of axons and synaptic connections, determines which neural units interact directly with each other (Zeki and Shipp, 1988).”
BackgroundThe anatomical basis of functional localization in the cortex
Passingham, R. E., Stephan, K. E., & Kötter, R. (2002) · Nature Reviews Neuroscience · doi:10.1038/nrn893 · Cited by 1,024 · see citing works
Self-citationMapping directed influence over the brain using Granger causality and fMRI
Roebroeck, A. F., Formisano, E., & Goebel, R. (2005) · NeuroImage · doi:10.1016/j.neuroimage.2004.11.017 · Cited by 1,012 · see citing works
Shmuel, A., Augath, M., Oeltermann, A., & Logothetis, N. K. (2006) · Nature Neuroscience · doi:10.1038/nn1675 · Cited by 898 · see citing works
Variational free energy and the Laplace approximation
Friston, K., Mattout, J., Trujillo-Barreto, N., Ashburner, J., & Penny, W. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2006.08.035 · Cited by 880 · see citing works
Comparing dynamic causal models.
Penny, W. D., Stephan, K. E., Mechelli, A., & Friston, K. J. (2004) · NeuroImage · doi:10.1016/j.neuroimage.2004.03.026 · Cited by 848 · see citing works
Self-citationEEG and MEG: forward solutions for inverse methods
Mosher, J. C., Leahy, R. M., & Lewis, P. S. (1999) · IEEE Transactions on Biomedical Engineering · doi:10.1109/10.748978 · Cited by 845 · see citing works
Wiener–Granger Causality: A well established methodology
Bressler, S. L., & Seth, A. K. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.02.059 · Cited by 845 · see citing works
Structural equation modeling and its application to network analysis in functional brain imaging
McLntosh, A. R., & Gonzalez-Lima, F. (1994) · Human Brain Mapping · doi:10.1002/hbm.460020104 · Cited by 838 · see citing works
Ten simple rules for dynamic causal modeling
Stephan, K. E., Penny, W. D., Moran, R. J., den Ouden, H. E. M., Daunizeau, J., & Friston, K. J. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2009.11.015 · Cited by 803 · see citing works
Self-citationBüchel, C. (1997) · Cerebral Cortex · doi:10.1093/cercor/7.8.768 · Cited by 794 · see citing works
A neural mass model for MEG/EEG:
Olivier David, A., & Friston, K. J. (2003) · NeuroImage · doi:10.1016/j.neuroimage.2003.07.015 · Cited by 705 · see citing works
Statistical Parametric Mapping
Friston, K. J. (2003) · Springer eBooks · doi:10.1007/978-1-4615-1079-6_16 · Cited by 690 · see citing works
Dynamic causal modeling of evoked responses in EEG and MEG
David, O., Kiebel, S. J., Harrison, L. M., Mattout, J., Kilner, J. M., & Friston, K. J. (2006) · NeuroImage · doi:10.1016/j.neuroimage.2005.10.045 · Cited by 620 · see citing works
Marreiros, A. C., Stephan, K. E., & Friston, K. J. (2010) · Scholarpedia · doi:10.4249/scholarpedia.9568 · Cited by 564 · see citing works
Self-citationIdentifying neural drivers with functional MRI: an electrophysiological validation
David, O., Guillemain, I., Saillet, S., Reyt, S., Deransart, C., Segebarth, C., & Depaulis, A. (2008) · PLoS Biology · doi:10.1371/journal.pbio.0060315 · Cited by 533 · see citing works
Towards a network theory of cognition
McIntosh, A. R. (2000) · Neural Networks · doi:10.1016/s0893-6080(00)00059-9 · Cited by 500 · see citing works
Beyond Phrenology: What Can Neuroimaging Tell Us About Distributed Circuitry?
Friston, K. (2002) · Annual Review of Neuroscience · doi:10.1146/annurev.neuro.25.112701.142846 · Cited by 465 · see citing works
Breakspear, M. J., Roberts, J. A., Terry, J. R., Rodrigues, S., Mahant, N., & Robinson, P. A. (2005) · Cerebral Cortex · doi:10.1093/cercor/bhj072 · Cited by 463 · see citing works
Comparing hemodynamic models with DCM
Stephan, K. E., Weiskopf, N., Drysdale, P. M., Robinson, P. A., & Friston, K. J. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.07.040 · Cited by 441 · see citing works
Self-citationNonlinear dynamic causal models for fMRI
Stephan, K. E., Kasper, L., Harrison, L. M., Daunizeau, J., den Ouden, H. E. M., Breakspear, M., & Friston, K. J. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.04.262 · Cited by 416 · see citing works
Self-citationEffective connectivity: Influence, causality and biophysical modeling
Valdes-Sosa, P. A., Roebroeck, A. F., Jean Daunizeau, A., & Friston, K. J. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2011.03.058 · Cited by 392 · see citing works
Multivariate autoregressive modeling of fMRI time series
Harrison, L. M., Penny, W. D., & Friston, K. J. (2003) · NeuroImage · doi:10.1016/s1053-8119(03)00160-5 · Cited by 378 · see citing works
Imaging cellular network dynamics in three dimensions using fast 3D laser scanning
Göbel, W., Kampa, B. M., & Helmchen, F. (2006) · Nature Methods · doi:10.1038/nmeth989 · Cited by 366 · see citing works
Top-down Dendritic Input Increases the Gain of Layer 5 Pyramidal Neurons
Larkum, M. E. (2004) · Cerebral Cortex · doi:10.1093/cercor/bhh065 · Cited by 366 · see citing works
Modelling functional integration: a comparison of structural equation and dynamic causal models
Penny, W. D., Stephan, K. E., Mechelli, A., & Friston, K. J. (2004) · NeuroImage · doi:10.1016/j.neuroimage.2004.07.041 · Cited by 325 · see citing works
Self-citationBayesian Estimation of Dynamical Systems: An Application to fMRI
Friston, K. J. (2002) · NeuroImage · doi:10.1006/nimg.2001.1044 · Cited by 310 · see citing works
Striatal Prediction Error Modulates Cortical Coupling
den Ouden, H. E. M., Daunizeau, J., Roiser, J., Friston, K. J., & Stephan, K. E. (2010) · The Journal of Neuroscience · doi:10.1523/jneurosci.4458-09.2010 · Cited by 304 · see citing works
Self-citationModelling event-related responses in the brain
Olivier David, A., Harrison, L. M., & Friston, K. J. (2005) · NeuroImage · doi:10.1016/j.neuroimage.2004.12.030 · Cited by 299 · see citing works
DEM: A variational treatment of dynamic systems
Friston, K. J., Trujillo-Barreto, N., & Daunizeau, J. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.02.054 · Cited by 278 · see citing works
Roebroeck, A. F., Formisano, E., & Goebel, R. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2009.09.036 · Cited by 237 · see citing works
Dynamic causal modelling of evoked responses in EEG/MEG with lead field parameterization
Kiebel, S. J., David, O., & Friston, K. J. (2006) · NeuroImage · doi:10.1016/j.neuroimage.2005.12.055 · Cited by 233 · see citing works
Dynamic causal modelling of evoked potentials: A reproducibility study
Garrido, M. I., Kilner, J. M., Kiebel, S. J., Stephan, K. E., & Friston, K. J. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.03.014 · Cited by 233 · see citing works
Self-citationNeural modeling, functional brain imaging, and cognition
Horwitz, B., Tagamets, M.-A., & McIntosh, A. R. (1999) · Trends in Cognitive Sciences · doi:10.1016/s1364-6613(99)01282-6 · Cited by 225 · see citing works
A neural mass model of spectral responses in electrophysiology
Moran, R., Kiebel, S. J., Stephan, K. E., Reilly, R. B., Jean Daunizeau, A., & Friston, K. J. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.05.032 · Cited by 214 · see citing works
Self-citationSolomon, S. G., White, A. J. R., & Martin, P. R. (2002) · Journal of Neuroscience · doi:10.1523/jneurosci.22-01-00338.2002 · Cited by 212 · see citing works
Model driven EEG/fMRI fusion of brain oscillations
Valdes-Sosa, P. A., Sánchez‐Bornot, J. M., Sotero, R. C., Iturria‐Medina, Y., Alemán‐Gómez, Y., Bosch‐Bayard, J., Carbonell, F., & Ozaki, T. (2008) · Human Brain Mapping · doi:10.1002/hbm.20704 · Cited by 207 · see citing works
Dynamic causal modelling for fMRI: A two-state model
Marreiros, A. C., Kiebel, S. J., & Friston, K. J. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.08.019 · Cited by 199 · see citing works
Variational Bayesian identification and prediction of stochastic nonlinear dynamic causal models
Jean Daunizeau, A., Friston, K. J., & Kiebel, S. J. (2009) · Physica D Nonlinear Phenomena · doi:10.1016/j.physd.2009.08.002 · Cited by 198 · see citing works
Dynamic causal models of steady-state responses
Moran, R. J., Stephan, K. E., Seidenbecher, T., Pape, H.-C., Dolan, R. J., & Friston, K. J. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2008.09.048 · Cited by 195 · see citing works
Self-citationPopulation dynamics: Variance and the sigmoid activation function
Marreiros, A. C., Jean Daunizeau, A., Kiebel, S. J., & Friston, K. J. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.04.239 · Cited by 173 · see citing works
Symmetrical event-related EEG/fMRI information fusion in a variational Bayesian framework
Jean Daunizeau, A., Grova, C., Marrelec, G., Mattout, J., Jbabdi, S., Pélégrini‐Issac, M., Lina, J., & Benali, H. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.01.044 · Cited by 160 · see citing works
Rudrauf, D., Olivier David, A., Lachaux, J.-P., Kovach, C. K., Martinerie, J. M., Renault, B., & Damásio, A. R. (2008) · Journal of Neuroscience · doi:10.1523/jneurosci.3476-07.2008 · Cited by 145 · see citing works
Dynamic causal modelling of induced responses
Chen, C. C., Kiebel, S. J., & Friston, K. J. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.03.026 · Cited by 136 · see citing works
Biophysical model for integrating neuronal activity, EEG, fMRI and metabolism
Sotero, R. C., & Trujillo‐Barreto, N. J. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.08.001 · Cited by 136 · see citing works
Dynamic causal modelling of evoked responses: The role of intrinsic connections
Kiebel, S. J., Garrido, M. I., & Friston, K. J. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.02.046 · Cited by 127 · see citing works
Bayesian estimation of synaptic physiology from the spectral responses of neural masses
Moran, R. J., Stephan, K. E., Kiebel, S. J., Rombach, N., O'Connor, W. T., Murphy, K. J., Reilly, R. B., & Friston, K. J. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.01.025 · Cited by 126 · see citing works
Self-citationSporns, O. (2007) · Scholarpedia · doi:10.4249/scholarpedia.4695 · Cited by 116 · see citing works
Dynamic causal modelling of distributed electromagnetic responses
Jean Daunizeau, A., Kiebel, S. J., & Friston, K. J. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2009.04.062 · Cited by 103 · see citing works
Biophysical models of fMRI responses
Stephan, K. E., Harrison, L. M., Penny, W. D., & Friston, K. J. (2004) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2004.08.006 · Cited by 96 · see citing works
Self-citationDynamic causal modeling: a generative model of slice timing in fMRI
Kiebel, S. J., Klöppel, S., Weiskopf, N., & Friston, K. J. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2006.10.026 · Cited by 92 · see citing works
Population dynamics under the Laplace assumption
Marreiros, A. C., Kiebel, S. J., Jean Daunizeau, A., Harrison, L. M., & Friston, K. J. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.10.008 · Cited by 85 · see citing works
Stochastic models of neuronal dynamics
Harrison, L. M., Olivier David, A., & Friston, K. J. (2005) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2005.1648 · Cited by 77 · see citing works
Dynamic Causal Models for phase coupling
Penny, W. D., Vladimir Litvak, A., Fuentemilla, L., Düzel, E., & Friston, K. J. (2009) · Journal of Neuroscience Methods · doi:10.1016/j.jneumeth.2009.06.029 · Cited by 74 · see citing works
Nonlinear local electrovascular coupling. I: A theoretical model
Riera, J. J., Wan, X., Jiménez, J. C., & Kawashima, R. (2006) · Human Brain Mapping · doi:10.1002/hbm.20230 · Cited by 71 · see citing works
Dynamic Causal Modeling applied to fMRI data shows high reliability
Schuyler, B. S., Ollinger, J. M., Oakes, T. R., Johnstone, T., & Davidson, R. J. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2009.07.015 · Cited by 66 · see citing works
The micro-architecture of the cerebral cortex: Functional neuroimaging models and metabolism
Riera, J. J., Schousboe, A., Waagepetersen, H. S., Howarth, C., & Hyder, F. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2007.12.051 · Cited by 63 · see citing works
Goldberg, T. E., Berman, K. F., RANDOLPH, C. C., Gold, J. M., & Weinberger, D. R. (1996) · NeuroImage · doi:10.1006/nimg.1996.0008 · Cited by 63 · see citing works
An Idiosyncratic Journey Beyond Mean Field Theory
Yedidia, J. S. (2001) · The MIT Press eBooks · doi:10.7551/mitpress/1100.003.0007 · Cited by 63 · see citing works
Stochastic Dynamics of a Finite-Size Spiking Neural Network
Soula, H. A., & Chow, C. C. (2007) · Neural Computation · doi:10.1162/neco.2007.19.12.3262 · Cited by 61 · see citing works
Gray, M. A., Minati, L., Harrison, N. A., Gianaros, P. J., Napadow, V., & Critchley, H. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2009.05.033 · Cited by 60 · see citing works
Reyt, S., Picq, C. A., Sinniger, V., Clarençon, D., Bonaz, B. L., & Olivier David, A. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.05.021 · Cited by 55 · see citing works
Association between striatal and extrastriatal dopamine D2-receptor binding and social desirability
Červenka, S., Gustavsson, P. J., Halldin, C., & Farde, L. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2009.12.006 · Cited by 53 · see citing works
Preictal short-term plasticity induced by intracerebral 1 Hz stimulation
Olivier David, A., Woźniak-Kwaśniewska, A., Minotti, L., & Kahane, P. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.11.005 · Cited by 51 · see citing works
The Brain Connectivity Workshops: Moving the frontiers of computational systems neuroscience
Stephan, K. E., Riera, J. J., Deco, G., & Horwitz, B. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.04.167 · Cited by 49 · see citing works
Self-citationOptimizing Experimental Design for Comparing Models of Brain Function
Jean Daunizeau, A., Preuschoff, K., Friston, K. J., & Stephan, K. E. (2011) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1002280 · Cited by 48 · see citing works
Self-citationfMRI connectivity, meaning and empiricism
Olivier David, A. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2009.09.073 · Cited by 47 · see citing works
Self-citationIntegration of light-controlled neuronal firing and fast circuit imaging
Airan, R. D., Hu, E. S., Vijaykumar, R., Roy, M., Meltzer, L. A., & Deisseroth, K. A. (2007) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2007.11.003 · Cited by 45 · see citing works
A Metropolis-Hastings algorithm for dynamic causal models.
Chumbley, J. R., Friston, K. J., Fearn, T., & Kiebel, S. J. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.07.028 · Cited by 42 · see citing works
L'Analyse Statistique Bayesienne.
Angers, J., & Robert, C. P. (1993) · Journal of the American Statistical Association · doi:10.2307/2290751 · Cited by 37 · see citing works
Dynamical causal modelling for M/EEG: Spatial and temporal symmetry constraints
Fastenrath, M., Friston, K. J., & Kiebel, S. J. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.07.041 · Cited by 31 · see citing works
Doing cognitive neuroscience: a third way
Egan, F., & Matthews, R. J. (2006) · Synthese · doi:10.1007/s11229-006-9098-9 · Cited by 30 · see citing works
Roebroeck, A. F., Formisano, E., & Goebel, R. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2009.10.077 · Cited by 26 · see citing works
Dynamic Causal Models and Autopoietic Systems
Olivier David, A. (2007) · Biological Research · doi:10.4067/s0716-97602007000500010 · Cited by 15 · see citing works
FMRI Dynamic Causal Modelling with Inferred Regions of Interest
Woolrich, M. W., Behrens, T. E. J., & Jbabdi, S. (2009) · NeuroImage · doi:10.1016/s1053-8119(09)71802-6 · Cited by 7 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Attention, uncertainty, and free-energy
Feldman, H., & Friston, K. J. (2010) · Frontiers in Human Neuroscience · doi:10.3389/fnhum.2010.00215 · Cited by 1,365 · see citing works
Wiener–Granger Causality: A well established methodology
Bressler, S. L., & Seth, A. K. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.02.059 · Cited by 845 · see citing works
Where Does EEG Come From and What Does It Mean?
Cohen, M. X. (2017) · Trends in Neurosciences · doi:10.1016/j.tins.2017.02.004 · Cited by 722 · see citing works
Farahani, F. V., Karwowski, W., & Lighthall, N. R. (2019) · Frontiers in Neuroscience · doi:10.3389/fnins.2019.00585 · Cited by 719 · see citing works
Analysing connectivity with Granger causality and dynamic causal modelling
Friston, K., Moran, R., & Seth, A. K. (2013) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2012.11.010 · Cited by 684 · see citing works
Bayesian model selection for group studies — Revisited
Rigoux, L., Stephan, K. E., Friston, K. J., & Jean Daunizeau, A. (2013) · NeuroImage · doi:10.1016/j.neuroimage.2013.08.065 · Cited by 675 · see citing works
Self-citationConnectivity-based approaches in stroke and recovery of function
Grefkes, C., & Fink, G. R. (2014) · The Lancet Neurology · doi:10.1016/s1474-4422(13)70264-3 · Cited by 557 · see citing works
Allostatic Self-efficacy: A Metacognitive Theory of Dyshomeostasis-Induced Fatigue and Depression
Stephan, K. E., Manjaly, Z. M., Mathys, C. D., Weber, L. A. E., Paliwal, S., Gard, T., Tittgemeyer, M., Fleming, S. M., Haker, H., Seth, A. K., et al. (2016) · Frontiers in Human Neuroscience · doi:10.3389/fnhum.2016.00550 · Cited by 437 · see citing works
“For example, dynamic causal models (DCMs; for reviews see Daunizeau et al., 2011; Friston et al., 2013) allow one to infer directed synaptic connections (effective connectivity) from neuroimaging or electrophysiological data.”
BackgroundSelf-citationComputing the Local Field Potential (LFP) from Integrate-and-Fire Network Models
Mazzoni, A., Lindén, H., Cuntz, H., Lansner, A., Panzeri, S., & Einevoll, G. T. (2015) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1004584 · Cited by 461 · see citing works
Anatomical insights into the interaction of emotion and cognition in the prefrontal cortex
Ray, R. D., & Zald, D. H. (2012) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2011.08.005 · Cited by 446 · see citing works
Effective connectivity: Influence, causality and biophysical modeling
Valdes-Sosa, P. A., Roebroeck, A. F., Jean Daunizeau, A., & Friston, K. J. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2011.03.058 · Cited by 392 · see citing works
VBA: A Probabilistic Treatment of Nonlinear Models for Neurobiological and Behavioural Data
Daunizeau, J., Adam, V., & Rigoux, L. (2014) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1003441 · Cited by 385 · see citing works
Direction of information flow in large-scale resting-state networks is frequency-dependent
Hillebrand, A., Tewarie, P. K. B., van Dellen, E., Yu, M., Carbo, E. W. S., Douw, L., Gouw, A. A., van Straaten, E. C. W., & Stam, C. J. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1515657113 · Cited by 341 · see citing works
A study of problems encountered in Granger causality analysis from a neuroscience perspective
Stokes, P. A., & Purdon, P. L. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1704663114 · Cited by 343 · see citing works
Dynamic causal modeling of cortical activity from the acute to the chronic stage after stroke
Rehme, A. K., Eickhoff, S. B., Wang, L. E., Fink, G. R., & Grefkes, C. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2011.01.014 · Cited by 334 · see citing works
Affective Cognition and its Disruption in Mood Disorders
Elliott, R., Zahn, R., Deakin, J. F. W., & Anderson, I. M. (2011) · Neuropsychopharmacology · doi:10.1038/npp.2010.77 · Cited by 330 · see citing works
Electrophysiological source imaging: A noninvasive window to brain dynamics
He, B., Sohrabpour, A., Brown, E., & Liu, Z. (2018) · Annual Review of Biomedical Engineering · doi:10.1146/annurev-bioeng-062117-120853 · Cited by 297 · see citing works
Friston, K. J., Li, B., Daunizeau, J., & Stephan, K. E. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2010.12.039 · Cited by 283 · see citing works
Self-citationDynamic causal modelling revisited
Friston, K. J., Preller, K. H., Mathys, C., Cagnan, H., Heinzle, J., Razi, A., & Zeidman, P. (2019) · NeuroImage · doi:10.1016/j.neuroimage.2017.02.045 · Cited by 271 · see citing works
The Virtual Brain Integrates Computational Modeling and Multimodal Neuroimaging
Ritter, P., Schirner, M., McIntosh, A. R., & Jirsa, V. K. (2013) · Brain Connectivity · doi:10.1089/brain.2012.0120 · Cited by 268 · see citing works
Multivariate Statistical Analyses for Neuroimaging Data
McIntosh, A. R., & Mišić, B. (2012) · Annual Review of Psychology · doi:10.1146/annurev-psych-113011-143804 · Cited by 253 · see citing works
Neural masses and fields in dynamic causal modeling
Moran, R., Pinotsis, D. A., & Friston, K. (2013) · Frontiers in Computational Neuroscience · doi:10.3389/fncom.2013.00057 · Cited by 255 · see citing works
Functional Magnetic Resonance Imaging Methods
Chen, J. E., & Glover, G. H. (2015) · Neuropsychology Review · doi:10.1007/s11065-015-9294-9 · Cited by 218 · see citing works
Null models in network neuroscience
Váša, F., & Mišić, B. (2022) · Nature reviews. Neuroscience · doi:10.1038/s41583-022-00601-9 · Cited by 217 · see citing works
Network Connectivity in Epilepsy: Resting State fMRI and EEG–fMRI Contributions
Centeno, M., & Carmichael, D. W. (2014) · Frontiers in Neurology · doi:10.3389/fneur.2014.00093 · Cited by 198 · see citing works
A multi-subject, multi-modal human neuroimaging dataset
Wakeman, D. G., & Henson, R. N. (2015) · Scientific Data · doi:10.1038/sdata.2015.1 · Cited by 190 · see citing works
LFP and oscillations—what do they tell us?
Friston, K. J., Bastos, A. M., Pinotsis, D. A., & Vladimir Litvak, A. (2014) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2014.05.004 · Cited by 187 · see citing works
Translational perspectives for computational neuroimaging
Stephan, K. E., Iglesias, S., Heinzle, J., & Diaconescu, A. O. (2015) · Neuron · doi:10.1016/j.neuron.2015.07.008 · Cited by 169 · see citing works
Self-citationNonlinear connectivity by Granger causality
Marinazzo, D., Liao, W., Chen, H., & Stramaglia, S. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.01.099 · Cited by 182 · see citing works
Robust and efficient parameter estimation in dynamic models of biological systems
Gábor, A., & Banga, J. R. (2015) · BMC Systems Biology · doi:10.1186/s12918-015-0219-2 · Cited by 171 · see citing works
Piccinini, G. (2020) · doi:10.1093/oso/9780198866282.001.0001 · Cited by 176 · see citing works
Harding, I. H., Yücel, M., Harrison, B. J., Pantelis, C., & Breakspear, M. J. (2014) · NeuroImage · doi:10.1016/j.neuroimage.2014.11.039 · Cited by 173 · see citing works
TAPAS: An Open-Source Software Package for Translational Neuromodeling and Computational Psychiatry
Frässle, S., Aponte, E. A., Bollmann, S., Brodersen, K. H., Do, C. T., Harrison, O. K., Harrison, S. J., Heinzle, J., Iglesias, S., Kasper, L., et al. (2021) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2021.680811 · Cited by 169 · see citing works
Self-citationFrässle, S., Lomakina, E. I., Razi, A., Friston, K. J., Buhmann, J. M., & Stephan, K. E. (2017) · NeuroImage · doi:10.1016/j.neuroimage.2017.02.090 · Cited by 160 · see citing works
Self-citationComputational neuroimaging strategies for single patient predictions
Stephan, K. E., Schlagenhauf, F., Huys, Q. J. M., Raman, S., Aponte, E. A., Brodersen, K. H., Rigoux, L., Moran, R., Jean Daunizeau, A., Dolan, R. J., et al. (2016) · NeuroImage · doi:10.1016/j.neuroimage.2016.06.038 · Cited by 166 · see citing works
Self-citationSladky, R., Höflich, A., Küblböck, M., Kraus, C., Baldinger, P., Moser, E., Lanzenberger, R., & Windischberger, C. (2015) · Cerebral Cortex · doi:10.1093/cercor/bht279 · Cited by 152 · see citing works
Spatial attention, precision, and Bayesian inference: a study of saccadic response speed
Vossel, S., Mathys, C., Daunizeau, J., Bauer, M., Driver, J., Friston, K. J., & Stephan, K. E. (2014) · Cerebral Cortex · doi:10.1093/cercor/bhs418 · Cited by 146 · see citing works
Self-citationFriston, K. J., Bastos, A. M., Oswal, A., van Wijk, B. C. M., Richter, C. G., & Vladimir Litvak, A. (2014) · NeuroImage · doi:10.1016/j.neuroimage.2014.06.062 · Cited by 133 · see citing works
Separating vascular and neuronal effects of age on fMRI BOLD signals
Tsvetanov, K. A., Henson, R. N., & Rowe, J. B. (2020) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2019.0631 · Cited by 127 · see citing works
Giorgio, J., Adams, J. N., Maass, A., Jagust, W. J., & Breakspear, M. (2024) · Neuron · doi:10.1016/j.neuron.2023.11.014 · Cited by 133 · see citing works
A Rapid Subcortical Amygdala Route for Faces Irrespective of Spatial Frequency and Emotion
McFadyen, J., Mermillod, M., Mattingley, J. B., Halász, V., & Garrido, M. I. (2017) · Journal of Neuroscience · doi:10.1523/jneurosci.3525-16.2017 · Cited by 130 · see citing works
Computational nosology and precision psychiatry
Friston, K. J., Redish, A. D., & Gordon, J. A. (2017) · Computational Psychiatry · doi:10.1162/cpsy_a_00001 · Cited by 126 · see citing works
Critical comments on dynamic causal modelling
Lohmann, G., Erfurth, K., Müller, K., & Turner, R. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2011.09.025 · Cited by 125 · see citing works
To wake or not to wake? The two-sided nature of the human K-complex
Jahnke, K., von Wegner, F., Morzelewski, A., Borisov, S. V., Maischein, M., Steinmetz, H., & Laufs, H. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2011.09.013 · Cited by 124 · see citing works
Teipel, S. J., Grothe, M. J., Zhou, J. H., Sepulcre, J., Dyrba, M., Sorg, C., & Babiloni, C. (2016) · Journal of the International Neuropsychological Society · doi:10.1017/s1355617715000995 · Cited by 115 · see citing works
Stochastic dynamic causal modelling of fMRI data: Should we care about neural noise?
Jean Daunizeau, A., Stephan, K. E., & Friston, K. J. (2012) · NeuroImage · doi:10.1016/j.neuroimage.2012.04.061 · Cited by 114 · see citing works
Self-citationA generative model of whole-brain effective connectivity
Frässle, S., Lomakina, E. I., Kasper, L., Manjaly, Z. M., Leff, A. P., Pruessmann, K. P., Buhmann, J. M., & Stephan, K. E. (2018) · NeuroImage · doi:10.1016/j.neuroimage.2018.05.058 · Cited by 104 · see citing works
Self-citationA short history of causal modeling of fMRI data
Stephan, K. E., & Roebroeck, A. (2012) · NeuroImage · doi:10.1016/j.neuroimage.2012.01.034 · Cited by 112 · see citing works
Self-citationDynamic Modulation of Amygdala–Hippocampal Connectivity by Emotional Arousal
Fastenrath, M., Coynel, D., Spalek, K., Milnik, A., Gschwind, L., Roozendaal, B., Papassotiropoulos, A., & de Quervain, D. (2014) · Journal of Neuroscience · doi:10.1523/jneurosci.0786-14.2014 · Cited by 100 · see citing works
Approaches for the Integrated Analysis of Structure, Function and Connectivity of the Human Brain
Eickhoff, S. B., & Grefkes, C. (2011) · Clinical EEG and Neuroscience · doi:10.1177/155005941104200211 · Cited by 106 · see citing works
Identifying abnormal connectivity in patients using Dynamic Causal Modelling of fMRI responses
Seghier, M. L. (2010) · Frontiers in Systems Neuroscience · doi:10.3389/fnsys.2010.00142 · Cited by 107 · see citing works
Quasi-experimental causality in neuroscience and behavioural research
Marinescu, I., Lawlor, P. N., & Kording, K. P. (2018) · Nature Human Behaviour · doi:10.1038/s41562-018-0466-5 · Cited by 101 · see citing works
Network discovery with large DCMs
Seghier, M. L., & Friston, K. J. (2012) · NeuroImage · doi:10.1016/j.neuroimage.2012.12.005 · Cited by 103 · see citing works
Working memory load modulation of parieto‐frontal connections: Evidence from dynamic causal modeling
Ma, L., Steinberg, J. L., Hasan, K. M., Narayana, P. A., Kramer, L. A., & Moeller, F. G. (2011) · Human Brain Mapping · doi:10.1002/hbm.21329 · Cited by 99 · see citing works
Structural networks in Alzheimer's disease
Reid, A., & Evans, A. C. (2013) · European Neuropsychopharmacology · doi:10.1016/j.euroneuro.2012.11.010 · Cited by 90 · see citing works
Meanfield modeling of propofol-induced changes in spontaneous EEG rhythms
Hindriks, R., & van Putten, M. J. A. M. (2012) · NeuroImage · doi:10.1016/j.neuroimage.2012.02.042 · Cited by 88 · see citing works
Studying Network Mechanisms Using Intracranial Stimulation in Epileptic Patients
Olivier David, A., Bastin, J., Chabardès, S., Minotti, L., & Kahane, P. (2010) · Frontiers in Systems Neuroscience · doi:10.3389/fnsys.2010.00148 · Cited by 89 · see citing works
The combination of EEG Source Imaging and EEG‐correlated functional MRI to map epileptic networks
Vulliémoz, S., Lemieux, L., Jean Daunizeau, A., Michel, C. M., & Duncan, J. S. (2009) · Epilepsia · doi:10.1111/j.1528-1167.2009.02342.x · Cited by 88 · see citing works
The Connected Brain: Causality, models, and intrinsic dynamics
Razi, A., & Friston, K. J. (2016) · IEEE Signal Processing Magazine · doi:10.1109/msp.2015.2482121 · Cited by 85 · see citing works
Adaptive Importance Sampling for Control and Inference
Kappen, H. J., & Euler, H.-C. R. (2016) · Journal of Statistical Physics · doi:10.1007/s10955-016-1446-7 · Cited by 85 · see citing works
Concepts of Connectivity and Human Epileptic Activity
Lemieux, L., Jean Daunizeau, A., & Walker, M. C. (2011) · Frontiers in Systems Neuroscience · doi:10.3389/fnsys.2011.00012 · Cited by 83 · see citing works
Top‐down versus bottom‐up attention differentially modulate frontal–parietal connectivity
Bowling, J. T., Friston, K. J., & Hopfinger, J. B. (2019) · Human Brain Mapping · doi:10.1002/hbm.24850 · Cited by 76 · see citing works
A Connectomic Atlas of the Human Cerebrum—Chapter 1: Introduction, Methods, and Significance
Baker, C. M., Burks, J. D., Briggs, R. G., Conner, A. K., Glenn, C. A., Sali, G., McCoy, T. M., Battiste, J. D., OʼDonoghue, D. L., & Sughrue, M. E. (2018) · Operative Neurosurgery · doi:10.1093/ons/opy253 · Cited by 81 · see citing works
Dong, G., Wang, M., Zheng, H., Wang, Z., Du, X., & Potenza, M. N. (2020) · Psychological Medicine · doi:10.1017/s003329172000032x · Cited by 81 · see citing works
Understanding DCM: Ten simple rules for the clinician
Kahan, J., & Foltynie, T. (2013) · NeuroImage · doi:10.1016/j.neuroimage.2013.07.008 · Cited by 76 · see citing works
Liang, M., Mouraux, A., & Iannetti, G. D. (2011) · Journal of Neuroscience · doi:10.1523/jneurosci.6207-10.2011 · Cited by 77 · see citing works
Seizure prediction in hippocampal and neocortical epilepsy using a model-based approach
Aarabi, A., & He, B. (2013) · Clinical Neurophysiology · doi:10.1016/j.clinph.2013.10.051 · Cited by 76 · see citing works
Rosch, R. E., Hunter, P. R., Baldeweg, T., Friston, K. J., & Meyer, M. P. (2018) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1006375 · Cited by 74 · see citing works
Frässle, S., Paulus, F. M., Krach, S., Schweinberger, S. R., Stephan, K. E., & Jansen, A. (2015) · NeuroImage · doi:10.1016/j.neuroimage.2015.09.055 · Cited by 79 · see citing works
Self-citationPhillips, H. N., Blenkmann, A. O., Hughes, L. E., Kochen, S. S., Bekinschtein, T. A., Cam‐CAN, & Rowe, J. B. (2016) · Cortex · doi:10.1016/j.cortex.2016.05.001 · Cited by 76 · see citing works
Herz, D. M., Haagensen, B. N., Christensen, M. S., Madsen, K. H., Rowe, J. B., Løkkegaard, A., & Siebner, H. R. (2015) · Brain · doi:10.1093/brain/awv096 · Cited by 78 · see citing works
Hell, F., Palleis, C., Mehrkens, J. H., Koeglsperger, T., & Bötzel, K. (2019) · Frontiers in Neurology · doi:10.3389/fneur.2019.00314 · Cited by 75 · see citing works
Emergence of Physiological Oscillation Frequencies in a Computer Model of Neocortex
Neymotin, S. A., Lee, H., Park, E. H., Fenton, A. A., & Lytton, W. W. (2011) · Frontiers in Computational Neuroscience · doi:10.3389/fncom.2011.00019 · Cited by 71 · see citing works
A cross-modal, cross-species comparison of connectivity measures in the primate brain
Reid, A., Lewis, J. D., Bezgin, G., Khundrakpam, B. S., Eickhoff, S. B., McIntosh, A. R., Bellec, P., & Evans, A. C. (2015) · NeuroImage · doi:10.1016/j.neuroimage.2015.10.057 · Cited by 73 · see citing works
Reading without the left ventral occipito-temporal cortex
Seghier, M. L., Neufeld, N. H., Zeidman, P., Leff, A. P., Mechelli, A., Nagendran, A., Riddoch, J. M., Humphreys, G. W., & Price, C. J. (2012) · Neuropsychologia · doi:10.1016/j.neuropsychologia.2012.09.030 · Cited by 72 · see citing works
Bielczyk, N., Uithol, S., van Mourik, T., Anderson, P., Glennon, J. C., & Buitelaar, J. K. (2018) · Network Neuroscience · doi:10.1162/netn_a_00062 · Cited by 70 · see citing works
Legon, W., Punzell, S., Dowlati, E. P., Adams, S. E., Stiles, A. B., & Moran, R. (2015) · Cerebral Cortex · doi:10.1093/cercor/bhv200 · Cited by 67 · see citing works
A dynamic causal model for evoked and induced responses
Chen, C., Kiebel, S. J., Kilner, J. M., Ward, N., Stephan, K. E., Wang, W. J., & Friston, K. J. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2011.07.066 · Cited by 66 · see citing works
Self-citationLiang, M., Mouraux, A., & Iannetti, G. D. (2012) · Cerebral Cortex · doi:10.1093/cercor/bhr363 · Cited by 65 · see citing works
Spectral graph theory of brain oscillations
Raj, A., Cai, C., Xie, X., Palacios, E. M., Owen, J. P., Mukherjee, P., & Nagarajan, S. S. (2020) · Human Brain Mapping · doi:10.1002/hbm.24991 · Cited by 66 · see citing works
Campo, P., Garrido, M. I., Moran, R., Maestú, F., García‐Morales, I., Gil‐Nagel, A., del Pozo, F., Dolan, R. J., & Friston, K. J. (2011) · Cerebral Cortex · doi:10.1093/cercor/bhr201 · Cited by 64 · see citing works
Hillebrandt, H. F., Friston, K. J., & Blakemore, S. (2014) · Scientific Reports · doi:10.1038/srep06240 · Cited by 63 · see citing works
When Two Become One: The Limits of Causality Analysis of Brain Dynamics
Chicharro, D., & Ledberg, A. (2012) · PLoS ONE · doi:10.1371/journal.pone.0032466 · Cited by 63 · see citing works
A graph neural network framework for causal inference in brain networks
Wein, S., Malloni, W. M., Tomé, A. M., Frank, S., Henze, G., Wüst, S., Greenlee, M. W., & Lang, E. W. (2021) · Scientific Reports · doi:10.1038/s41598-021-87411-8 · Cited by 63 · see citing works
Estimation of effective connectivity via data-driven neural modeling
Freestone, D. R., Karoly, P. J., Nešić, D., Aram, P., Cook, M. J., & Grayden, D. B. (2014) · Frontiers in Neuroscience · doi:10.3389/fnins.2014.00383 · Cited by 59 · see citing works
Sohrabpour, A., Ye, S., Worrell, G. A., Zhang, W., & He, B. (2016) · IEEE Transactions on Biomedical Engineering · doi:10.1109/tbme.2016.2616474 · Cited by 59 · see citing works
Human cerebellum and corticocerebellar connections involved in emotional memory enhancement
Fastenrath, M., Spalek, K., Coynel, D., Loos, E., Milnik, A., Egli, T., Schicktanz, N. S., Geissmann, L., Roozendaal, B., Papassotiropoulos, A., et al. (2022) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2204900119 · Cited by 56 · see citing works
Precision and neuronal dynamics in the human posterior parietal cortex during evidence accumulation
FitzGerald, T. H. B., Moran, R., Friston, K. J., & Dolan, R. J. (2014) · NeuroImage · doi:10.1016/j.neuroimage.2014.12.015 · Cited by 56 · see citing works
Vartanian, O. A., Beatty, E. L., Smith, I., Blackler, K., Lam, Q., & Forbes, S. (2018) · Neuropsychologia · doi:10.1016/j.neuropsychologia.2018.02.024 · Cited by 57 · see citing works
Seizure pathways: A model-based investigation
Karoly, P. J., Kuhlmann, L., Soudry, D., Grayden, D. B., Cook, M. J., & Freestone, D. R. (2018) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1006403 · Cited by 57 · see citing works
DiQuattro, N. E., Sawaki, R., & Geng, J. J. (2013) · Cerebral Cortex · doi:10.1093/cercor/bht172 · Cited by 57 · see citing works
Bayesian model reductionPreprint
Friston, K. J., Parr, T., & Zeidman, P. (2018) · arXiv (Cornell University) · doi:10.48550/arxiv.1805.07092 · Cited by 71 · see citing works
Predicting individual clinical trajectories of depression with generative embedding
Frässle, S., Marquand, A. F., Schmaal, L., Dinga, R., Veltman, D. J., van der Wee, N. J. A., van Tol, M., Schöbi, D., Penninx, B. W. J. H., & Stephan, K. E. (2020) · NeuroImage Clinical · doi:10.1016/j.nicl.2020.102213 · Cited by 51 · see citing works
Self-citationObserving the Observer (II): Deciding When to Decide
Jean Daunizeau, A., den Ouden, H. E. M., Pessiglione, M., Kiebel, S. J., Friston, K. J., & Stephan, K. E. (2010) · PLoS ONE · doi:10.1371/journal.pone.0015555 · Cited by 58 · see citing works
Self-citationBest Practices in Data Analysis and Sharing in Neuroimaging using MEEGPreprint
Pernet, C. R., Garrido, M. I., Gramfort, A., Maurits, N. M., Michel, C. M., Pang, E. W., Salmelin, R. H., Schoffelen, J., Valdes-Sosa, P. A., & Puce, A. (2018) · doi:10.31219/osf.io/a8dhx · Cited by 56 · see citing works
The functional architectures of addition and subtraction: Network discovery using fMRI and DCM
Yang, Y., Zhong, N., Friston, K. J., Imamura, K., Lu, S., Li, M., Zhou, H., Wang, H., Li, K., & Hu, B. (2017) · Human Brain Mapping · doi:10.1002/hbm.23585 · Cited by 54 · see citing works
Framework to study dynamic dependencies in networks of interacting processes
Chicharro, D., & Ledberg, A. (2012) · Physical Review E · doi:10.1103/physreve.86.041901 · Cited by 54 · see citing works
Woolrich, M. W. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2011.10.047 · Cited by 52 · see citing works
Sparse DCM for whole-brain effective connectivity from resting-state fMRI data
Prando, G., Zorzi, M., Bertoldo, A., Corbetta, M., Zorzi, M., & Chiuso, A. (2019) · NeuroImage · doi:10.1016/j.neuroimage.2019.116367 · Cited by 50 · see citing works
Structurally-informed Bayesian functional connectivity analysis
Hinne, M., Ambrogioni, L., Janssen, R. J., Heskes, T., & van Gerven, M. A. J. (2013) · NeuroImage · doi:10.1016/j.neuroimage.2013.09.075 · Cited by 52 · see citing works
- Authors
- Daunizeau, J., David, O., & Stephan, K. E.
- Affiliations
- Wellcome Centre for Human Neuroimaging (GB)
- ORCID
- Stephan, K.E.
- Venue
- NeuroImage
- Publisher
- Elsevier BV
- Published
- 2011-09
- Volume
- 58
- Issue
- 2
- Pages
- 312-322
- ISSN
- 1053-8119 (ISSN-L)
- OpenAlex
- W2133352409
- Cited by
- 331
- References
- 95
- Citations by year
- 2026: 9 · 2025: 17 · 2024: 10 · 2023: 14 · 2022: 16 · 2021: 22 · 2020: 37 · 2019: 19 · 2018: 23 · 2017: 15 · 2016: 25 · 2015: 30 · 2014: 26 · 2013: 20 · 2012: 18
- FWCI
- 1.08
- Type
- journal article
- Language
- en
- Open access
- green
- www.zora.uzh.ch
- Licence
- Locations
- NeuroImage (publishedVersion)
- PubMed (publishedVersion)
- UCL Discovery (University College London) (publishedVersion)
- Zurich Open Repository and Archive (University of Zurich) (acceptedVersion, other-oa)
- HAL (submittedVersion, other-oa)
- Zurich Open Repository and Archive (University of Zurich) (submittedVersion, other-oa)
- Zurich Open Repository and Archive (University of Zurich)
- Funders
- University Research Priority Program “Foundations of Human Social Behaviour”
- Topics
- Life Sciences › Neuroscience › Cognitive Neuroscience › Functional Brain Connectivity Studies
- Life Sciences › Neuroscience › Cognitive Neuroscience › Neural dynamics and brain function
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Advanced Neuroimaging Techniques and Applications
- Keywords
- dynamic causal modeling, neuronal network dynamics, biophysical model, parameter estimation, model comparison, functional MRI, EEG, MEG, functional integration
- MeSH terms
- Bayes Theorem, Biophysics, Brain Mapping, Data Interpretation, Statistical, Electroencephalography, Humans, Image Processing, Computer-Assisted, Magnetic Resonance Imaging, Models, Neurological, Reproducibility of Results, Magnetoencephalography, Models, Statistical, Causality
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review