Singularities: Landmarks on the Pathways of Life
Abstract
Erwin Schrödinger's What is Life? published 60 years ago, influenced much of the development of molecular biology. In this new book Christian De Duve, Nobel Laureate and pioneer of modern cell biology, presents a contemporary response to this classic, providing a sophisticated consideration of the key steps or bottlenecks that constrain the origins and evolution of life. De Duve surveys the entire history of life, including insights into the conditions that may have led to its emergence. He uses as landmarks the many remarkable singularities along the way, such as the single ancestry of all living beings, the universal genetic code, and the monophyletic origin of eukaryotes. The book offers a brief guided tour of biochemistry and phylogeny, from the basic molecular building blocks to the origin of humans. Each successive singularity is introduced in a sequence paralleling the hypothetical development of features and conditions on the primitive earth, explaining how and why each transition to greater complexity occurred.
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There are two types of amino acids, depending on whether they were supplied by the prebiotic environment (Phase 1) or were biosynthetically produced (Phase 2).
“There are two types of amino acids, depending on whether they were supplied by the prebiotic environment (Phase 1) or were biosynthetically produced (Phase 2) [68,105].”
From The Origin of Prebiotic Information System in the Peptide/RNA World: A Simulation Model of the Evolution of Translation and the Genetic Code (2019) · cites this paper as [68]
The first phase of amino acids consists of glycine, alanine, serine, aspartic acid, glutamic acid, valine, leucine, isoleucine, proline, and threonine.
“The first phase of amino acids consists of glycine, alanine, serine, aspartic acid, glutamic acid, valine, leucine, isoleucine, proline, and threonine.”
From The Origin of Prebiotic Information System in the Peptide/RNA World: A Simulation Model of the Evolution of Translation and the Genetic Code (2019) · cites this paper as [68]
Phase 2 amino acids include phenylalanine, tyrosine, arginine, histidine, tryptophan, asparagine, glutamine, lysine, cysteine, and methionine.
“Phase 2 amino acids include phenylalanine, tyrosine, arginine, histidine, tryptophan, asparagine, glutamine, lysine, cysteine, and methionine.”
From The Origin of Prebiotic Information System in the Peptide/RNA World: A Simulation Model of the Evolution of Translation and the Genetic Code (2019) · cites this paper as [68]
Phase 2 amino acids entered the code by means of biosynthesis from the Phase 1 amino acids with the emergence of tRNA molecules, aminoacyl transferase enzyme, and ribosomes.
“Phase 2, the amino acids entered the code by means of biosynthesis from the Phase 1 amino acids with the emergence of tRNA molecules, aminoacyl transferase enzyme, and ribosomes [68,82,105,108].”
From The Origin of Prebiotic Information System in the Peptide/RNA World: A Simulation Model of the Evolution of Translation and the Genetic Code (2019) · cites this paper as [68]
Cites
Woese, C. R. (1987) · Microbiological Reviews · doi:10.1128/mr.51.2.221-271.1987 · Cited by 5,042 · see citing works
A Production of Amino Acids Under Possible Primitive Earth Conditions
Miller, S. L. (1953) · Science · doi:10.1126/science.117.3046.528 · Cited by 3,522 · see citing works
de Duve, C., & Wattiaux, R. (1966) · Annual Review of Physiology · doi:10.1146/annurev.ph.28.030166.002251 · Cited by 3,033 · see citing works
Self-citationWestheimer, F. H. (1987) · Science · doi:10.1126/science.2434996 · Cited by 1,711 · see citing works
Dating the rise of atmospheric oxygen
Bekker, A., Holland, H. D., Wang, P.-L., Rumble, D., Stein, H. J., Hannah, J. L., Coetzee, L. L., & Beukes, N. J. (2004) · Nature · doi:10.1038/nature02260 · Cited by 1,435 · see citing works
The Hydrogen Hypothesis for the First Eukaryote
Martin, W., & Müller, M. (1998) · Nature · doi:10.1038/32096 · Cited by 1,282 · see citing works
Proterozoic Ocean Chemistry and Evolution: A Bioinorganic Bridge?
Anbar, A. D., & Knoll, A. H. (2002) · Science · doi:10.1126/science.1069651 · Cited by 1,191 · see citing works
A new small-bodied hominin from the Late Pleistocene of Flores, Indonesia.
Brown, P., Sutikna, T., Morwood, M. J., Soejono, R. P., Jatmiko, Wayhu Saptomo, E., & Awe Due, R. (2004) · Nature · doi:10.1038/nature02999 · Cited by 1,075 · see citing works
The antiquity of RNA-based evolution.
Joyce, G. F. (2002) · Nature · doi:10.1038/418214a · Cited by 1,070 · see citing works
RNA-catalyzed RNA polymerization: Accurate and general RNA-templated primer extension.
Johnston, W. K., Unrau, P. J., Lawrence, M. S., Glasner, M. E., & Bartel, D. P. (2001) · Science · doi:10.1126/science.1060786 · Cited by 768 · see citing works
Molybdenum isotope evidence for widespread anoxia in mid-Proterozoic oceans
Arnold, G. L., Anbar, A. D., Barling, J., & Lyons, T. W. (2004) · Science · doi:10.1126/science.1091785 · Cited by 689 · see citing works
Chemical etiology of nucleic acid structure
Eschenmoser, A. (1999) · Science · doi:10.1126/science.284.5423.2118 · Cited by 611 · see citing works
Annihilation of ecosystems by large asteroid impacts on the early Earth
Sleep, N. H., Zahnle, K. J., Kasting, J. F., & Morowitz, H. J. (1989) · Nature · doi:10.1038/342139a0 · Cited by 574 · see citing works
Volcanic production of polyphosphates and its relevance to prebiotic evolution
Yamagata, Y., Watanabe, H., Saitoh, M., & Namba, T. (1991) · Nature · doi:10.1038/352516a0 · Cited by 371 · see citing works
Monnard, P.-A., Apel, C. L., Kanavarioti, A., & Deamer, D. W. (2002) · Astrobiology · doi:10.1089/15311070260192237 · Cited by 262 · see citing works
Osawa, S. (1995) · doi:10.1093/oso/9780198547815.001.0001 · Cited by 216 · see citing works
Production of RNA by a polymerase protein encapsulated within phospholipid vesicles
Chakrabarti, A. C., Breaker, R. R., Joyce, G. F., & Deamer, D. W. (1994) · Journal of Molecular Evolution · doi:10.1007/bf00160400 · Cited by 196 · see citing works
From pre‐cells to Eukarya – a tale of two lipids
Wächtershäuser, G. (2003) · Molecular Microbiology · doi:10.1046/j.1365-2958.2003.03267.x · Cited by 176 · see citing works
Some consequences of the RNA world hypothesis
Orgel, L. E. (2003) · Origins of life and evolution of the biosphere · doi:10.1023/a:1024616317965 · Cited by 124 · see citing works
RNA–ligand chemistry: A testable source for the genetic code
YARUS, M. (2000) · RNA · doi:10.1017/s1355838200002569 · Cited by 113 · see citing works
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How did LUCA make a living? Chemiosmosis in the origin of life
Lane, N., Allen, J. F., & Martin, W. (2010) · BioEssays · doi:10.1002/bies.200900131 · Cited by 377 · see citing works
The Origin of Life in Alkaline Hydrothermal Vents
Sojo, V., Herschy, B., Whicher, A., Camprubí, E., & Lane, N. (2016) · Astrobiology · doi:10.1089/ast.2015.1406 · Cited by 341 · see citing works
Glansdorff, N., Xu, Y., & Labedan, B. (2008) · Biology Direct · doi:10.1186/1745-6150-3-29 · Cited by 264 · see citing works
The origins of phagocytosis and eukaryogenesis
Yutin, N., Wolf, M. Y., Wolf, Y. I., & Koonin, E. V. (2009) · Biology Direct · doi:10.1186/1745-6150-4-9 · Cited by 247 · see citing works
An origin-of-life reactor to simulate alkaline hydrothermal vents
Herschy, B., Whicher, A., Camprubi, E., Watson, C., Dartnell, L., Ward, J., Evans, J. R. G., & Lane, N. (2014) · Journal of Molecular Evolution · doi:10.1007/s00239-014-9658-4 · Cited by 194 · see citing works
Iron catalysis at the origin of life
Camprubi, E., Jordan, S. F., Vasiliadou, R., & Lane, N. (2017) · IUBMB Life · doi:10.1002/iub.1632 · Cited by 144 · see citing works
Frenkel-Pinter, M., Haynes, J. W., C, M., Petrov, A. S., Burcar, B. T., Krishnamurthy, R., Hud, N. V., Leman, L. J., & Williams, L. D. (2019) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1904849116 · Cited by 128 · see citing works
The energy expansions of evolution
Judson, O. P. (2017) · Nature Ecology & Evolution · doi:10.1038/s41559-017-0138 · Cited by 118 · see citing works
Prebiotic synthesis of phosphoenol pyruvate by α-phosphorylation-controlled triose glycolysis
Coggins, A. J., & Powner, M. W. (2017) · Nature Chemistry · doi:10.1038/nchem.2624 · Cited by 113 · see citing works
Proton gradients at the origin of life
Lane, N. (2017) · BioEssays · doi:10.1002/bies.201600217 · Cited by 115 · see citing works
Keller, M. A., Zylstra, A., Castro, C., Turchyn, A. V., Griffin, J. L., & Ralser, M. (2016) · Science Advances · doi:10.1126/sciadv.1501235 · Cited by 106 · see citing works
A prebiotic basis for ATP as the universal energy currency
Pinna, S., Kunz, C., Halpern, A., Harrison, S. A., Jordan, S. F., Ward, J., Werner, F., & Lane, N. (2022) · PLOS Biology · doi:10.1371/journal.pbio.3001437 · Cited by 103 · see citing works
Acetyl Phosphate as a Primordial Energy Currency at the Origin of Life
Whicher, A., Camprubi, E., Pinna, S., Herschy, B., & Lane, N. (2018) · Origins of Life and Evolution of Biospheres · doi:10.1007/s11084-018-9555-8 · Cited by 81 · see citing works
Chatterjee, S., & Yadav, S. (2019) · Life · doi:10.3390/life9010025 · Cited by 80 · see citing works
Life as a guide to prebiotic nucleotide synthesis
Harrison, S. A., & Lane, N. (2018) · Nature Communications · doi:10.1038/s41467-018-07220-y · Cited by 63 · see citing works
de Duve, C. (2011) · Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences · doi:10.1098/rsta.2010.0312 · Cited by 49 · see citing works
- Authors
- de Duve, C.
- Venue
- Cambridge University Press eBooks
- Publisher
- Cambridge University Press
- Published
- 2005-10-24
- OpenAlex
- W4211143379
- Cited by
- 141
- References
- 20
- Citations by year
- 2026: 3 · 2025: 2 · 2024: 4 · 2023: 14 · 2022: 5 · 2021: 2 · 2020: 2 · 2019: 6 · 2018: 8 · 2017: 6 · 2016: 7 · 2015: 8 · 2014: 4 · 2013: 1 · 2012: 2
- FWCI
- 6.34
- Type
- book
- Language
- en
- Open access
- closed
- Locations
- Cambridge University Press eBooks (publishedVersion)
- Topics
- Physical Sciences › Physics and Astronomy › Astronomy and Astrophysics › Origins and Evolution of Life
- Social Sciences › Arts and Humanities › History and Philosophy of Science › Philosophy and History of Science
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
- Keywords
- origin of life, evolution of life, molecular evolution, universal genetic code, phylogeny, biochemistry, early Earth, history of life
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