Methylation of exons 1D, 1F, and 1Hof the glucocorticoid receptor gene promoter and exposure to adversity in preschool-aged children
Open accessAbstract
Epigenetic modifications to the genome are a key mechanism involved in the biological encoding of experience. Animal studies and a growing body of literature in humans have shown that early adversity is linked to methylation of the gene for the glucocorticoid receptor (GR), which is a key regulator of the hypothalamic–pituitary–adrenal axis as well as a broad range of physiological systems including metabolic and immune function. One hundred eighty-four families participated, including n= 74 with child welfare documentation of moderate-severe maltreatment in the past 6 months. Children ranged in age from 3 to 5 years, and were racially and ethnically diverse. Structured record review and interviews in the home were used to assess a history of maltreatment, other traumas, and contextual life stressors, and a composite variable assessed the number exposures to these adversities. Methylation of regions 1 D, 1 F, and 1 H of the GR gene was measured via sodium bisulfite pyrosequencing. The composite measure of adversity was positively correlated with methylation at exons 1 D and 1 F in the promoter of the GR gene. Individual stress measures were significantly associated with a several CpG sites in these regions. GR gene methylation may be a mechanism of the biobehavioral effects of adverse exposures in young children.
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1 retracted
Perroud, N., Dayer, A., Piguet, C., Nallet, A., Favre, S., Malafosse, A., & Aubry, J.-M. (2014) · British Journal of Psychiatry · doi:10.1192/bjp.bp.112.120055 · Cited by 89 · see citing works
RetractedEffects of stress throughout the lifespan on the brain, behaviour and cognition
Lupien, S. J., McEwen, B. S., Gunnar, M. R., & Heim, C. (2009) · Nature Reviews Neuroscience · doi:10.1038/nrn2639 · Cited by 6,256 · see citing works
Epigenetic programming by maternal behavior
Weaver, I. C. G., Cervoni, N., Champagne, F. A., D'Alessio, A. C., Sharma, S., Seckl, J. R., Dymov, S., Szyf, M., & Meaney, M. J. (2004) · Nature Neuroscience · doi:10.1038/nn1276 · Cited by 6,177 · see citing works
DNA methylation and its basic function
Moore, L. D., Le, T., & Fan, G. (2013) · Neuropsychopharmacology · doi:10.1038/npp.2012.112 · Cited by 4,906 · see citing works
Epigenetic regulation of the glucocorticoid receptor in human brain associates with childhood abuse
McGowan, P. O., Sasaki, A., D'Alessio, A. C., Dymov, S., Labonté, B., Szyf, M., Turecki, G., & Meaney, M. J. (2009) · Nature Neuroscience · doi:10.1038/nn.2270 · Cited by 3,531 · see citing works
Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL
Heinemeyer, T. (1998) · Nucleic Acids Research · doi:10.1093/nar/26.1.362 · Cited by 1,462 · see citing works
Allele-specific FKBP5 DNA demethylation mediates gene–childhood trauma interactions
Klengel, T., Mehta, D., Anacker, C., Rex-Haffner, M., Pruessner, J. C., Pariante, C. M., Pace, T. W. W., Mercer, K. B., Mayberg, H. S., Bradley, B., et al. (2013) · Nature Neuroscience · doi:10.1038/nn.3275 · Cited by 1,447 · see citing works
Oberlander, T. F., Weinberg, J., Papsdorf, M., Grunau, R., Misri, S., & Devlin, A. M. (2008) · Epigenetics · doi:10.4161/epi.3.2.6034 · Cited by 1,432 · see citing works
Parental olfactory experience influences behavior and neural structure in subsequent generations
Dias, B. G., & Ressler, K. J. (2014) · Nature Neuroscience · doi:10.1038/nn.3594 · Cited by 1,338 · see citing works
Defining child maltreatment: The interface between policy and research
Cicchetti, D. (1993) · Cited by 859 · see citing works
Sameroff, A. J., Seifer, R., Baldwin, A., & Baldwin, C. (1993) · Child Development · doi:10.2307/1131438 · Cited by 856 · see citing works
Self-citationSameroff, A. J., Seifer, R., Baldwin, A. L., & Baldwin, C. P. (1993) · Child Development · doi:10.1111/j.1467-8624.1993.tb02896.x · Cited by 849 · see citing works
Self-citationThe Role of Chaos in Poverty and Children's Socioemotional Adjustment
Evans, G. W., Gonnella, C., Marcynyszyn, L. A., Gentile, L., & Salpekar, N. (2005) · Psychological Science · doi:10.1111/j.0956-7976.2005.01575.x · Cited by 709 · see citing works
A review of adversity, the amygdala and the hippocampus: a consideration of developmental timing
Tottenham, N. (2009) · Frontiers in Human Neuroscience · doi:10.3389/neuro.09.068.2009 · Cited by 651 · see citing works
Perroud, N., Paoloni-Giacobino, A., Prada, P., Olié, E., Salzmann, A., Nicastro, R., Guillaume, S., Mouthon, D., Stouder, C., Dieben, K., et al. (2011) · Translational Psychiatry · doi:10.1038/tp.2011.60 · Cited by 516 · see citing works
Radtke, K. M., Ruf, M., Gunter, H. M., Dohrmann, K., Schauer, M., Meyer, A., & Elbert, T. (2011) · Translational Psychiatry · doi:10.1038/tp.2011.21 · Cited by 511 · cited 3× · see citing works
“However, there is evidence in humans that maternal and offspring methylation at these sites are not significantly correlated (Mulligan et al., 2012; Oberlander et al., 2008; Radtke et al., 2011), suggesting that these methylation marks are not heritable across generations and are driven by environmental regulation dur…”
BackgroundEpigenetic mechanisms mediating the long-term effects of maternal care on development
Champagne, F. A., & Curley, J. P. (2008) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2007.10.009 · Cited by 504 · see citing works
Tyrka, A. R., Price, L. H., Marsit, C., Walters, O. C., & Carpenter, L. L. (2012) · PLoS ONE · doi:10.1371/journal.pone.0030148 · Cited by 486 · see citing works
Self-citationEssex, M. J., Thomas Boyce, W., Hertzman, C., Lam, L. L., Armstrong, J. M., Neumann, S. M. A., & Kobor, M. S. (2013) · Child Development · doi:10.1111/j.1467-8624.2011.01641.x · Cited by 462 · see citing works
Implication of the hypothalamic-pituitary-adrenal axis in the physiopathology of depression
Barden, N. (2004) · Journal of Psychiatry and Neuroscience · doi:10.1139/jpn.0421 · Cited by 416 · see citing works
Yehuda, R., Daskalakis, N. P., Desarnaud, F., Makotkine, I., Lehrner, A. L., Koch, E., Flory, J. D., Buxbaum, J. D., Meaney, M. J., & Bierer, L. M. (2013) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2013.00118 · Cited by 358 · see citing works
Differential immune system DNA methylation and cytokine regulation in post-traumatic stress disorder
Smith, A. K., Conneely, K. N., Kilaru, V., Mercer, K. B., Weiss, T. E., Bradley, B., Tang, Y., Gillespie, C. F., Cubells, J. F., & Ressler, K. J. (2011) · American Journal of Medical Genetics Part B: Neuropsychiatric Genetics · doi:10.1002/ajmg.b.31212 · Cited by 355 · see citing works
Zhang, T. Y., Labonté, B., Wen, X. L., Turecki, G., & Meaney, M. J. (2013) · Neuropsychopharmacology · doi:10.1038/npp.2012.149 · Cited by 347 · see citing works
Labonte, B., Yerko, V., Gross, J., Mechawar, N., Meaney, M. J., Szyf, M., & Turecki, G. (2012) · Biological Psychiatry · doi:10.1016/j.biopsych.2012.01.034 · Cited by 345 · see citing works
Mulligan, C., D'Errico, N., Stees, J., & Hughes, D. (2012) · Epigenetics · doi:10.4161/epi.21180 · Cited by 342 · see citing works
The signature of maternal rearing in the methylome in rhesus macaque prefrontal cortex and T cells
Provençal, N., Suderman, M. J., Guillemin, C., Massart, R., Ruggiero, A., Wang, D., Bennett, A. J., Pierre, P. J., Friedman, D. P., Côté, S. M., et al. (2012) · The Journal of Neuroscience · doi:10.1523/jneurosci.1470-12.2012 · Cited by 312 · see citing works
Talens, R. P., Boomsma, D. I., Tobi, E. W., Kremer, D., Jukema, J. W., Willemsen, G. A. H. M., Putter, H., Slagboom, P. E., & Heijmans, B. T. (2010) · The FASEB Journal · doi:10.1096/fj.09-150490 · Cited by 312 · see citing works
Conradt, E. D., Lester, B. M., Appleton, A. A., Armstrong, D. A., & Marsit, C. J. (2013) · Epigenetics · doi:10.4161/epi.26634 · Cited by 299 · see citing works
Self-citationProlonged behavioral stress enhances synaptic connectivity in the basolateral amygdala
Vyas, A., Jadhav, S., & Chattarji, S. (2006) · Neuroscience · doi:10.1016/j.neuroscience.2006.08.003 · Cited by 299 · see citing works
Minireview: Stress-related psychiatric disorders with low cortisol levels: A metabolic hypothesis
Yehuda, R., & Seckl, J. (2011) · Endocrinology · doi:10.1210/en.2011-1218 · Cited by 276 · see citing works
Lee, R. S., Tamashiro, K. L. K., Yang, X., Purcell, R. H., Harvey, A., Willour, V. L., Huo, Y., Rongione, M., Wand, G. S., & Potash, J. B. (2010) · Endocrinology · doi:10.1210/en.2010-0225 · Cited by 275 · see citing works
Hompes, T., Izzi, B., Gellens, E., Morreels, M., Fieuws, S., Pexsters, A., Schops, G., Dom, M., Van Bree, R., Freson, K., et al. (2013) · Journal of Psychiatric Research · doi:10.1016/j.jpsychires.2013.03.009 · Cited by 262 · see citing works
Turner, J. D., & Muller, C. P. (2005) · Journal of Molecular Endocrinology · doi:10.1677/jme.1.01822 · Cited by 256 · see citing works
DNA methylation and childhood maltreatment: From animal models to human studies
Lutz, P.-E., & Turecki, G. (2014) · Neuroscience · doi:10.1016/j.neuroscience.2013.07.069 · Cited by 236 · see citing works
Genetic and epigenetic associations of MAOA and NR3C1 with depression and childhood adversities
Melas, P. A., Wei, Y., Wong, C. C. Y., Sjöholm, L. K., Åberg, E., Mill, J., Schalling, M., Forsell, Y., & Lavebratt, C. (2013) · International Journal of Neuropsychopharmacology · doi:10.1017/s1461145713000102 · Cited by 220 · see citing works
The Dynamic Epigenome and its Implications in Toxicology
Moshe Szyf, A. (2007) · Toxicological Sciences · doi:10.1093/toxsci/kfm177 · Cited by 220 · see citing works
Scheeringa, M. S., & Haslett, N. (2010) · Child Psychiatry & Human Development · doi:10.1007/s10578-009-0169-2 · Cited by 211 · see citing works
Duman, R. S. (2009) · Dialogues in Clinical Neuroscience · doi:10.31887/dcns.2009.11.3/rsduman · Cited by 210 · see citing works
Yehuda, R., Flory, J. D., Pratchett, L. C., Buxbaum, J. D., Ising, M., & Holsboer, F. (2010) · Psychopharmacology · doi:10.1007/s00213-010-1969-6 · Cited by 202 · see citing works
van Zuiden, M., Geuze, E., Willemen, H. L. D. M., Vermetten, E., Maas, M., Heijnen, C. J., & Kavelaars, A. (2011) · American Journal of Psychiatry · doi:10.1176/appi.ajp.2010.10050706 · Cited by 190 · see citing works
Epigenetic Influence of Stress and the Social Environment
Gudsnuk, K. M., & Champagne, F. A. (2012) · ILAR Journal · doi:10.1093/ilar.53.3-4.279 · Cited by 185 · see citing works
Thiede, C., Prange‐Krex, G., Freiberg‐Richter, J., Bornhäuser, M., & Ehninger, G. (2000) · Bone Marrow Transplantation · doi:10.1038/sj.bmt.1702170 · Cited by 176 · see citing works
Tadić, A., Müller-Engling, L., Schlicht, K. F., Kotsiari, A., Dreimüller, N., Kleimann, A., Bleich, S., Lieb, K., & Frieling, H. (2014) · Molecular Psychiatry · doi:10.1038/mp.2013.58 · Cited by 175 · see citing works
Kundaković, M., Lim, S. C., Gudsnuk, K. M., & Champagne, F. A. (2013) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2013.00078 · Cited by 172 · see citing works
The neurobiological correlates of childhood adversity and implications for treatment
Tyrka, A. R., Burgers, D. E., Philip, N. S., Price, L. H., & Carpenter, L. L. (2013) · Acta Psychiatrica Scandinavica · doi:10.1111/acps.12143 · Cited by 142 · see citing works
Self-citationIncreased DNA methylation of neuropsychiatric genes occurs in borderline personality disorder
Dammann, G., Teschler, S., Haag, T., Altmüller, F., Tuczek, F., & Dammann, R. (2011) · Epigenetics · doi:10.4161/epi.6.12.18363 · Cited by 137 · see citing works
Steiger, H., Labonté, B., Groleau, P., Turecki, G., & Israël, M. (2013) · International Journal of Eating Disorders · doi:10.1002/eat.22113 · Cited by 133 · see citing works
Kember, R. L., Dempster, E. L., Lee, T. H. A., Schalkwyk, L. C., Mill, J., & Fernandes, C. (2012) · Brain and Behavior · doi:10.1002/brb3.69 · Cited by 133 · see citing works
Daniels, W. M. U., Fairbairn, L., van Tilburg, G., McEvoy, C. R. E., Zigmond, M. J., Russell, V. A., & Stein, D. J. (2009) · Metabolic Brain Disease · doi:10.1007/s11011-009-9163-4 · Cited by 118 · see citing works
Bromer, C., Marsit, C. J., Armstrong, D. A., Padbury, J. F., & Lester, B. M. (2012) · Developmental Psychobiology · doi:10.1002/dev.21061 · Cited by 116 · see citing works
Self-citationReed, K., Poulin, M. L., Yan, L., & Parissenti, A. M. (2009) · Analytical Biochemistry · doi:10.1016/j.ab.2009.10.021 · Cited by 96 · see citing works
Armstrong, D. A., Lesseur, C., Conradt, E., Lester, B. M., & Marsit, C. J. (2014) · The FASEB Journal · doi:10.1096/fj.13-238402 · Cited by 89 · see citing works
Self-citationEdelman, S., Shalev, I., Uzefovsky, F., Israel, S., Knafo, A., Kremer, I., Mankuta, D., Kaitz, M., & Ebstein, R. P. (2012) · PLoS ONE · doi:10.1371/journal.pone.0048597 · Cited by 64 · see citing works
How do environments talk to genes?
Moshe Szyf, A. (2012) · Nature Neuroscience · doi:10.1038/nn.3286 · Cited by 57 · see citing works
de Rooij, S. R., Costello, P. M., Veenendaal, M. V. E., Lillycrop, K. A., Gluckman, P. D., Hanson, M. A., Painter, R. C., & Roseboom, T. J. (2011) · Psychoneuroendocrinology · doi:10.1016/j.psyneuen.2011.09.010 · Cited by 52 · see citing works
Genetic fingerprinting in mouthwashes of patients after allogeneic bone marrow transplantation
Endler, G., Greinix, H., Winkler, K., Mitterbauer, G., & Mannhalter, C. (1999) · Bone Marrow Transplantation · doi:10.1038/sj.bmt.1701815 · Cited by 51 · see citing works
Mind-Body Interrelationship in DNA Methylation
Szyf, M. (2012) · Chemical immunology/Fortschritte der Allergielehre/Progress in allergy/Chemical immunology and allergy · doi:10.1159/000336503 · Cited by 14 · see citing works
Pregnancy and childbirth among females aged 10-19 years - United States, 2007-2010.
Ventura, S. J., Hamilton, B. E., & Mathews, T. J. (2013) · PubMed · Cited by 14 · see citing works
Borsonelo, E. C., Vieira, L., & Galduróz, J. C. F. (2013) · Nutritional Neuroscience · doi:10.1179/1476830512y.0000000007 · Cited by 8 · see citing works
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- Authors
- Tyrka, A. R., Parade, S. H., Eslinger, N. M., Marsit, C. J., Lesseur, C., Armstrong, D. A., Philip, N. S., Josefson, B., & Seifer, R.
- Affiliations
- Brown University (US)
- Butler Hospital (US)
- Dartmouth College (US)
- Bradley Hospital (US)
- Corresponding author
- Tyrka, Audrey R.
- ORCID
- Venue
- Development and Psychopathology
- Publisher
- Cambridge University Press (CUP)
- Published
- 2015-05
- Volume
- 27
- Issue
- 2
- Pages
- 577-585
- ISSN
- 0954-5794 (ISSN-L)
- 1469-2198
- PMC
- PMC5014375
- OpenAlex
- W1755529343
- Cited by
- 60
- References
- 59
- Citations by year
- 2025: 3 · 2024: 2 · 2023: 7 · 2022: 5 · 2021: 6 · 2020: 7 · 2019: 6 · 2018: 7 · 2017: 8 · 2016: 7 · 2015: 2
- FWCI
- 9.92
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Development and Psychopathology (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- U.S. Department of Veterans Affairs (IK2 CX000724)
- National Institute of Mental Health (R01MH083704)
- Topics
- Social Sciences › Psychology › Clinical Psychology › Child Abuse and Trauma
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Epigenetics and DNA Methylation
- Life Sciences › Neuroscience › Behavioral Neuroscience › Stress Responses and Cortisol
- Keywords
- glucocorticoid receptor gene, DNA methylation, childhood adversity, child abuse, preschool children, epigenetics, hypothalamic-pituitary-adrenal axis, CpG sites, life events, child welfare
- MeSH terms
- Child Abuse, Child, Preschool, Exons, Female, Humans, Hypothalamo-Hypophyseal System, Male, Pituitary-Adrenal System, Promoter Regions, Genetic, Receptors, Glucocorticoid, DNA Methylation, Epigenesis, Genetic
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