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The genetic basis of early T-cell precursor acute lymphoblastic leukaemia
Open accessAbstract
Early T-cell precursor acute lymphoblastic leukaemia (ETP ALL) is an aggressive malignancy of unknown genetic basis. We performed whole-genome sequencing of 12 ETP ALL cases and assessed the frequency of the identified somatic mutations in 94 T-cell acute lymphoblastic leukaemia cases. ETP ALL was characterized by activating mutations in genes regulating cytokine receptor and RAS signalling (67% of cases; NRAS, KRAS, FLT3, IL7R, JAK3, JAK1, SH2B3 and BRAF), inactivating lesions disrupting haematopoietic development (58%; GATA3, ETV6, RUNX1, IKZF1 and EP300) and histone-modifying genes (48%; EZH2, EED, SUZ12, SETD2 and EP300). We also identified new targets of recurrent mutation including DNM2, ECT2L and RELN. The mutational spectrum is similar to myeloid tumours, and moreover, the global transcriptional profile of ETP ALL was similar to that of normal and myeloid leukaemia haematopoietic stem cells. These findings suggest that addition of myeloid-directed therapies might improve the poor outcome of ETP ALL. This work shows that treatments used for acute myeloid leukaemia and targeted therapies could be used for early T-cell precursor acute lymphoblastic leukaemia. The early T-cell precursor (ETP) subtype of childhood acute lymphoblastic leukaemia (ALL) has a poor prognosis when treated with standard chemotherapy. Whole genome sequencing is used here to gain insights into the genetic basis of the condition. The results reveal a high frequency of activating mutations in genes regulating cytokine receptor and Ras signalling, lesions that disrupt haemopoiesis (many of which arise from chromosomal rearrangements that generate novel chimeric in-frame fusion genes), and inactivating mutations in histone modifying genes. This mutation pattern resembles that of myeloid malignancies, suggesting that myeloid-directed therapies such as high-dose cytarabine, or targeted therapies that inhibit cytokine receptor and JAK signalling, might be effective in ETP ALL.
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“High frequency of mutations in EZH2, EED, and SUZ12 are observed in patients with early T cell precursor ALL (ETP-ALL) [154, 155].”
From Proteolysis targeting chimeras (PROTACs) are emerging therapeutics for hematologic malignancies (2020) · cites this paper as [155]
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Cites
Circos: An information aesthetic for comparative genomicsPreprint
Krzywinski, M. I., Schein, J. E., Birol, İ., Connors, J. M., Gascoyne, R. D., Horsman, D. E., Jones, S. J. M., & Marra, M. A. (2009) · Genome Research · doi:10.1101/gr.092759.109 · Cited by 11,073
The Polycomb complex PRC2 and its mark in life
Margueron, R., & Reinberg, D. (2011) · Nature · doi:10.1038/nature09784 · Cited by 3,347 · cited 1×
“EZH2 catalyses trimethylation of histone 3 lysine 27 (H3K27), resulting in transcriptional repression of genes involved in development, stem cell maintenance and differentiatio”
BackgroundActivating Mutations of NOTCH1 in Human T Cell Acute Lymphoblastic Leukemia
Weng, A. P., Ferrando, A. A., Lee, W., Morris, J. P., Silverman, L. B., Sanchez-Irizarry, C., Blacklow, S. C., Look, A. T., & Aster, J. C. (2004) · Science · doi:10.1126/science.1102160 · Cited by 2,706
Massive genomic rearrangement acquired in a single catastrophic event during cancer development
Stephens, P. J., Greenman, C. D., Fu, B., Yang, F., Bignell, G. R., Mudie, L. J., Pleasance, E. D., Lau, K. W., Beare, D., Stebbings, L. A., et al. (2011) · Cell · doi:10.1016/j.cell.2010.11.055 · Cited by 2,414 · cited 1×
“Three cases (SJTALL001, SJTALL002, SJTALL003) had multiple complex rearrangements with breakpoints suggestive of a single cellular catastrophe (“chromothripsis&rdquo”
BackgroundOkuda, T., van Deursen, J., Hiebert, S. W., Grosveld, G., & Downing, J. R. (1996) · Cell · doi:10.1016/s0092-8674(00)80986-1 · Cited by 1,856
Self-citationMorin, R. D., Johnson, N. A., Severson, T., Mungall, A. J. J., An, J., Goya, R., Paul, J. E., Boyle, M., Woolcock, B. W., Kuchenbauer, F. C., et al. (2010) · Nature Genetics · doi:10.1038/ng.518 · Cited by 1,719
Pui, C.-H., Robison, L. L., & Look, A. T. (2008) · The Lancet · doi:10.1016/s0140-6736(08)60457-2 · Cited by 1,564
Self-citationDeletion of IKZF1 and Prognosis in Acute Lymphoblastic Leukemia
Mullighan, C. G., Su, X., Zhang, J., Radtke, I., Phillips, L. A. A., Miller, C. B., Ma, J., Liu, W., Cheng, C., Schulman, B. A., et al. (2009) · New England Journal of Medicine · doi:10.1056/nejmoa0808253 · Cited by 1,422 · cited 1×
“, and a signature of poor outcome in IKZF1 -mutated high-risk B-progenitor AL”
BackgroundSelf-citationStem cell gene expression programs influence clinical outcome in human leukemia
Eppert, K., Takenaka, K., Lechman, E. R., Waldron, L., Nilsson, B., van Galen, P., Metzeler, K. H., Poeppl, A. G., Ling, V., Beyene, J., et al. (2011) · Nature Medicine · doi:10.1038/nm.2415 · Cited by 1,071
Self-citationEarly T-cell precursor leukaemia: a subtype of very high-risk acute lymphoblastic leukaemia
Coustan‐Smith, E., Mullighan, C. G., Onciu, M. M., Behm, F. G., Raimondi, S. C., Pei, D., Cheng, C., Su, X., Rubnitz, J. E., Basso, G., et al. (2009) · The Lancet Oncology · doi:10.1016/s1470-2045(08)70314-0 · Cited by 1,012
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Migliorini, G., Fiege, B., Hosking, F. J., Ma, Y. P., Kumar, R., Sherborne, A. L., Filho, M. I. D. S., Vijayakrishnan, J., Koehler, R., Thomsen, H., et al. (2013) · Blood · doi:10.1182/blood-2013-03-491316 · Cited by 164
Teachey, D. T., Devidas, M., Wood, B. L., Chen, Z., Hayashi, R. J., Hermiston, M. L., Annett, R. D., Archer, J. H., Asselin, B. L., August, K. J., et al. (2022) · Journal of Clinical Oncology · doi:10.1200/jco.21.02678 · Cited by 159
Self-citationGermline ETV6 Mutations Confer Susceptibility to Acute Lymphoblastic Leukemia and Thrombocytopenia
Topka, S., Vijai, J., Walsh, M. F., Jacobs, L., Maria, A., Villano, D., Gaddam, P., Wu, G., McGee, R. B., Quinn, E. A., et al. (2015) · PLoS Genetics · doi:10.1371/journal.pgen.1005262 · Cited by 159
“contribute to childhood leukemia, we screened a cohort of 588 leukemia patients evaluated through the PCGP, a genomic sequencing effort involving pediatric cancers [4,28–42](accession# EGAS00001000348, EGAS00001000654, EGAS00001000380, EGAS00001000253, EGAS00001000246, EGAS00001000447).”
MethodSelf-citationT-Lymphoblastic Leukemia/Lymphoma
You, M. J., Medeiros, L. J., & Hsi, E. D. (2015) · American Journal of Clinical Pathology · doi:10.1309/ajcpmf03lvsblhpj · Cited by 158
“2 t(14;20)(q11;p11) NA 1 Proto-oncogene MYB t(6;7)(q23;q34) NA 3”
BackgroundInfluentialThe many faces of IKZF1 in B-cell precursor acute lymphoblastic leukemia
Marke, R., van Leeuwen, F. N., & Scheijen, B. (2018) · Haematologica · doi:10.3324/haematol.2017.185603 · Cited by 160
Vicente, C., Schwab, C. J., Broux, M., Geerdens, E., Degryse, S., Demeyer, S., Lahortiga, I., Elliott, A., Chilton, L., Starza, R. L., et al. (2015) · Haematologica · doi:10.3324/haematol.2015.130179 · Cited by 156
“Median age (range) 11 (1-63) 12 (2-66) 0.”
Self-citationCharacterization of the EZH2-MMSET Histone Methyltransferase Regulatory Axis in Cancer
Asangani, I. A., Ateeq, B., Cao, Q., Dodson, L. M., Pandhi, M. B., Kunju, L. P., Mehra, R., Lonigro, R. J., Siddiqui, J., Palanisamy, N., et al. (2012) · Molecular Cell · doi:10.1016/j.molcel.2012.10.008 · Cited by 158
“Furthermore, recurrent inactivating mutations of EZH2 have been found in diseases such as myelodysplasia and T cell precursor acute lymphoblastic leukemia (Ernst et al., 2010; Nikoloski et al., 2010; Zhang et al., 2012), suggesting that in certain contexts, EZH2 can have tumor suppressive activities.”
Teachey, D. T., & O’Connor, D. (2019) · Blood · doi:10.1182/blood.2019001557 · Cited by 156
Sinefungin Derivatives as Inhibitors and Structure Probes of Protein Lysine Methyltransferase SETD2
Zheng, W., Ibáñez, G., Wu, H., Blum, G., Zeng, H., Dong, A., Li, F., Hajian, T., Allali‐Hassani, A., Amaya, M. F., et al. (2012) · Journal of the American Chemical Society · doi:10.1021/ja307060p · Cited by 156
Grossmann, V., Haferlach, C., Weißmann, S., Roller, A., Schindela, S., Poetzinger, F., Stadler, K., Bellos, F., Kern, W., Haferlach, T., et al. (2013) · Genes Chromosomes and Cancer · doi:10.1002/gcc.22039 · Cited by 162
RAS-MAPK pathway epigenetic activation in cancer: miRNAs in action
Masliah‐Planchon, J., Garinet, S., & Pasmant, É. (2015) · Oncotarget · doi:10.18632/oncotarget.6476 · Cited by 157
“As an example, KRAS (V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog) somatic mutations were identified in more than 90% of pancreatic ductal adenocarcinoma (PDAC) [2]; BRAF and NRAS mutations occur with mutual exclusion in melanoma and account altogether for 83% of the cases [3]; RAS-MAPK signaling pathway is al…”
InfluentialV(D)J Recombination: Mechanism, Errors, and Fidelity
Roth, D. B. (2014) · Microbiology Spectrum · doi:10.1128/microbiolspec.mdna3-0041-2014 · Cited by 154
“Aberrant V(D)J recombination events do occur, and they can be life-threatening, underlying the genesis of common lymphoid neoplasms (4, 5, 6, 7), as discussed below.”
BackgroundPrognostic relevance of integrated genetic profiling in adult T-cell acute lymphoblastic leukemia
Vlierberghe, P. V., Ambesi‐Impiombato, A., Keersmaecker, K. D., Hadler, M., Paietta, E. M., Tallman, M. S., Rowe, J. M., Forné, C., Rué, M., & Ferrando, A. A. (2013) · Blood · doi:10.1182/blood-2013-03-491092 · Cited by 160
“1,7-9 Thus, early immature T-ALLs, which are arrested early at the double-negative stage of thymocyte development, 1,10,11 show a transcriptional program related to hematopoietic stem cells and myeloid progenitors, 6,11 higher levels of LYL1 and LMO2 expression, 1 and mutations in acute myeloid leukemia genes, 6,11 to…”
Dworzak, M. N., Buldini, B., Gaipa, G., Ratei, R., Hrušák, O., Luria, D., Rosenthal, E., Bourquin, J., Sartor, M. M., Schumich, A., et al. (2017) · Cytometry Part B Clinical Cytometry · doi:10.1002/cyto.b.21518 · Cited by 153
“EGIL and WHO 2008/2016 requirements for ALLsubtyping, MPAL (16), BAL (9,10), as well as early T-cell precursor (ETP) leukemia discrimination (12,25,26).”
BackgroundSelf-citationAdvances in germline predisposition to acute leukaemias and myeloid neoplasms
Klco, J. M., & Mullighan, C. G. (2020) · Nature reviews. Cancer · doi:10.1038/s41568-020-00315-z · Cited by 163
Self-citationOyer, J. A., Huang, X., Zheng, Y., Shim, J. Y., Ezponda, T., Carpenter, Z., Allegretta, M., Okot-Kotber, C. I., Patel, J. P., Melnick, A. F., et al. (2013) · Leukemia · doi:10.1038/leu.2013.204 · Cited by 151
Inherited genetic variation in childhood acute lymphoblastic leukemia
Moriyama, T., Relling, M. V., & Yang, J. J. J. (2015) · Blood · doi:10.1182/blood-2014-12-580001 · Cited by 149
“Gene expression profiling and, more recently, whole-genome sequencing studies discovered tumor genetic features associated with outcome and drug resistance.(6,15,42,43) In parallel, there is increasing evidence that inherited genetic variations play important roles in determining patients’ risk of relapse (Table 1).”
BackgroundWaanders, E., Gu, Z., Dobson, S. M., Antić, Ž., Crawford, J. C., Ma, X., Edmonson, M. N., Payne-Turner, D., van de Vorst, M., Jongmans, M. C. J., et al. (2020) · Blood Cancer Discovery · doi:10.1158/0008-5472.bcd-19-0041 · Cited by 153
Self-citationGatta, G. D., Palomero, T., Pérez-García, A., Ambesi‐Impiombato, A., Bansal, M., Carpenter, Z., Keersmaecker, K. D., Solé, X., Xu, L., Paietta, E. M., et al. (2012) · Nature Medicine · doi:10.1038/nm.2610 · Cited by 151
Nagase, R., Inoue, D., Pastore, A., Fujino, T., Hou, H.-A., Yamasaki, N., Goyama, S., Saika, M., Kanai, A., Sera, Y., et al. (2018) · Journal of Experimental Medicine · doi:10.1084/jem.20171151 · Cited by 155
“These results are consistent with the enrichment of ASXL1 mutations in myeloid neoplasms and the worsened anemia encountered in MDS and myeloproliferative neoplasm patients with ASXL1 mutations (Quesada et al., 2011; Zhang et al., 2012; Shi et al., 2016).”
Nanomedicines for the treatment of hematological malignancies
Deshantri, A. K., Varela-Moreira, A., Ecker, V., Mandhane, S. N., Schiffelers, R. M., Buchner, M., & Fens, M. H. A. M. (2018) · Journal of Controlled Release · doi:10.1016/j.jconrel.2018.08.034 · Cited by 150
Degryse, S., de Bock, C. E., Cox, L., Demeyer, S., Gielen, O., Mentens, N., Jacobs, K., Geerdens, E., Gianfelici, V., Hulselmans, G. J., et al. (2014) · Blood · doi:10.1182/blood-2014-04-566687 · Cited by 146
Self-citationAtak, Z. K., Gianfelici, V., Hulselmans, G. J., Keersmaecker, K. D., Devasia, A. G., Geerdens, E., Mentens, N., Chiaretti, S., Durinck, K., Uyttebroeck, A., et al. (2013) · PLoS Genetics · doi:10.1371/journal.pgen.1003997 · Cited by 149
“approaches have recently proven their value in the discovery of novel driver genes [13,14,17,21].”
BackgroundInfluentialSelf-citationExploiting the Epigenome to Control Cancer-Promoting Gene-Expression Programs
Brien, G. L., Valerio, D. G., & Armstrong, S. A. (2016) · Cancer Cell · doi:10.1016/j.ccell.2016.03.007 · Cited by 155
T-cell Acute Lymphoblastic Leukemia: A Roadmap to Targeted Therapies
Cordo’, V., van der Zwet, J. C. G., Canté-Barrett, K., Pieters, R., & Meijerink, J. P. P. (2020) · Blood Cancer Discovery · doi:10.1158/2643-3230.bcd-20-0093 · Cited by 148
“In particular, although NOTCH1-activating mutations and cell-cycle regulators’ CDKN2A/2B-inactivating mutations are relatively rare in ETP-ALL, recurrent activating aberrations involve kinase-encoding genes, such as FLT3, NRAS, IL7R, JAK1, and JAK3 (21, 22).”
BackgroundResultInfluentialSETD2 alterations impair DNA damage recognition and lead to resistance to chemotherapy in leukemia
Mar, B. G., Chu, S. H., Kahn, J. D., Krivtsov, A. V., Koche, R. P., Castellano, C. A., Kotlier, J. L., Zon, R. L., McConkey, M. E., Chabon, J. R., et al. (2017) · Blood · doi:10.1182/blood-2017-03-775569 · Cited by 143
Chen, B., Jiang, L., Zhong, M.-L., Li, J.-F., Li, B.-S., Peng, L.-J., Dai, Y.-T., Cui, B., Yan, T., Zhang, W.-N., et al. (2017) · Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.1717125115 · Cited by 129
“Of note, a subgroup of T-ALL with a characteristic immunophenotype (CD3/CD1a/ CD8/CD5) has been designated as early T-cell precursor ALL (ETP-ALL), with special gene mutation patterns (16, 22).”
BackgroundSelf-citationWilkinson, A. C., Ballabio, E., Geng, H., North, P. S., Tapia, M. C., Kerry, J., Biswas, D., Roeder, R. G., Allis, C. D., Melnick, A. M., et al. (2013) · Cell Reports · doi:10.1016/j.celrep.2012.12.016 · Cited by 137
“118 Cell Reports 3, 116–127, January 31, 2013 a2013 The Authors vating, suggesting that RUNX1 normally functions as a tumor suppressor (Blyth et al., 2005; Mangan and Speck, 2011; Zhang et al., 2012).”
BackgroundInfluentialIntegrated genetic and epigenetic analysis of childhood acute lymphoblastic leukemia
Figueroa, M. E., Chen, S.-C., Andersson, A., Phillips, L. A., Li, Y., Sotzen, J. R., Kundu, M., Downing, J. R., Melnick, A. M., & Mullighan, C. G. (2013) · Journal of Clinical Investigation · doi:10.1172/jci66203 · Cited by 140
Self-citationMethylation across the central dogma in health and diseases: new therapeutic strategies
Liu, R., Zhao, E., Yu, H., Yuan, C., Abbas, M. N., & Cui, H. (2023) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-023-01528-y · Cited by 155
Recurrent SPI1 (PU.1) fusions in high-risk pediatric T cell acute lymphoblastic leukemia
Seki, M., Kimura, S., Isobe, T., Yoshida, K., Ueno, H., Nakajima-Takagi, Y., Wang, C., Lin, L., Kon, A., Suzuki, H., et al. (2017) · Nature Genetics · doi:10.1038/ng.3900 · Cited by 138
Second Malignant Neoplasms After Treatment of Childhood Acute Lymphoblastic Leukemia
Schmiegelow, K., Levinsen, M., Attarbaschi, A., Baruchel, A., Devidas, M., Escherich, G., Gibson, B. E. S., Heydrich, C., Horibe, K., Ishida, Y., et al. (2013) · Journal of Clinical Oncology · doi:10.1200/jco.2012.47.0500 · Cited by 139
Self-citationMochizuki‐Kashio, M., Aoyama, K., Sashida, G., Oshima, M., Tomioka, T., Muto, T., Wang, C., & Iwama, A. (2015) · Blood · doi:10.1182/blood-2015-03-634428 · Cited by 147
“PRC2 gene mutations, including EZH2 mutations, are also frequently identified in adult T-ALL (25%)(34,44,45) as well as childhood early T-cell precursor (ETP) ALL (42%) and non-ETP ALL (12%).(46) We observed the development of T-cell receptor ab (TCRab)-type T-ALL/lymphoma in the secondary transplantation ofEzh2-defic…”
BackgroundEmerging roles for Polycomb proteins in cancer
Pasini, D., & Di Croce, L. (2016) · Current Opinion in Genetics & Development · doi:10.1016/j.gde.2016.03.013 · Cited by 133
Engaging chromatin: PRC2 structure meets function
Chammas, P., Mocavini, I., & Croce, L. D. (2019) · British Journal of Cancer · doi:10.1038/s41416-019-0615-2 · Cited by 149
Zhao, A., Zhou, H., Yang, J., Li, M., & Niu, T. (2023) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-023-01342-6 · Cited by 153
Genomic subtyping and therapeutic targeting of acute erythroleukemia
Iacobucci, I., Wen, J., Meggendorfer, M., Choi, J. K., Shi, L., Pounds, S. B., Carmichael, C. L., Masih, K. E., Morris, S. M., Lindsley, R. C., et al. (2019) · Nature Genetics · doi:10.1038/s41588-019-0375-1 · Cited by 155
Self-citationThe genomic landscape of pediatric acute lymphoblastic leukemia and precision medicine opportunities
Tran, T. H., & Hunger, S. P. (2020) · Seminars in Cancer Biology · doi:10.1016/j.semcancer.2020.10.013 · Cited by 139
Self-citationThe role of ASXL1 in hematopoiesis and myeloid malignancies
Asada, S., Fujino, T., Goyama, S., & Kitamura, T. (2019) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-019-03084-7 · Cited by 142
Gossage, L., Murtaza, M., Slatter, A. F., Lichtenstein, C. P., Warren, A. Y., Haynes, B., Marass, F., Roberts, I., Shanahan, S. J., Claas, A., et al. (2013) · Genes Chromosomes and Cancer · doi:10.1002/gcc.22116 · Cited by 137
The Ikaros family in lymphocyte development
Heizmann, B., Kastner, P., & Chan, S. H. (2017) · Current Opinion in Immunology · doi:10.1016/j.coi.2017.11.005 · Cited by 140
Pediatric T‐cell acute lymphoblastic leukemia
Karrman, K., & Johansson, B. (2016) · Genes Chromosomes and Cancer · doi:10.1002/gcc.22416 · Cited by 136
Winer, H. Y., Rodrigues, G. O. L., Hixon, J. A., Aiello, F. B., Hsu, T. C., Wachter, B. T., Li, W., & Durum, S. K. (2022) · Cytokine · doi:10.1016/j.cyto.2022.156049 · Cited by 136
Genetic loss of SH2B3 in acute lymphoblastic leukemia
Pérez-García, A., Ambesi‐Impiombato, A., Hadler, M., Rigo, I., LeDuc, C. A., Kelly, K. M., Jalas, C., Paietta, E. M., Racevskis, J., Rowe, J. M., et al. (2013) · Blood · doi:10.1182/blood-2013-05-500850 · Cited by 130
“Loss of Sh2b3 accelerates the development of NOTCH-induced leukemias in mice Following on this result, and to formally address the interaction between oncogenic NOTCH1 and Sh2b3 loss in T-cell transformation, we analyzed the effects of genetic inactivation of Sh2b3 in a retroviral-transduction bone marrow transplantat…”
InfluentialSelf-citationEpigenetic Control of ImmunityPreprint
Busslinger, M., & Tarakhovsky, A. (2014) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a019307 · Cited by 133
“7C) (Ntziachristos et al. 2012; Zhang et al. 2012a).”
InfluentialHematopoietic Stem Cell Origin of BRAF V600E Mutations in Hairy Cell Leukemia
Chung, S. S., Kim, E. H., Park, J. H., Chung, Y. R., Lito, P., Teruya‐Feldstein, J., Hu, W., Béguelin, W., Monette, S., Duy, C., et al. (2014) · Science Translational Medicine · doi:10.1126/scitranslmed.3008004 · Cited by 129
The epigenetic landscape of renal cancer
Morris, M. R., & Latif, F. (2016) · Nature Reviews Nephrology · doi:10.1038/nrneph.2016.168 · Cited by 129
Gutmann, D. H., McLellan, M. D., Hussain, I., Wallis, J. W., Fulton, L., Fulton, R. S., Magrini, V. J., Demeter, R., Wylie, T., Kandoth, C., et al. (2012) · Genome Research · doi:10.1101/gr.142604.112 · Cited by 130
“…such as pediatric TALL and the M1 and M3 subtypes of adult AML (2.0 3 10 8 to 4.1 3 10 8 mutations per base) (Mardis et al. 2009; Welch et al. 2012; Zhang et al. 2012b), and differ markedly from adult solid tumors, such as luminal breast cancer, that often have rates that are orders of magnitude…”
BackgroundResultInfluentialSelf-citationTherapeutic antibody targeting of Notch1 in T-acute lymphoblastic leukemia xenografts
Agnusdei, V., Minuzzo, S. A., Frasson, C., Grassi, A., Axelrod, F. T., Satyal, S. H., Gurney, A. L., Hoey, T. C., Seganfreddo, E., Basso, G., et al. (2013) · Leukemia · doi:10.1038/leu.2013.183 · Cited by 127
Self-citationUnderstanding mutagenesis through delineation of mutational signatures in human cancer
Petljak, M., & Alexandrov, L. B. (2016) · Carcinogenesis · doi:10.1093/carcin/bgw055 · Cited by 110
How I treat acute lymphoblastic leukemia in older adolescents and young adults
Curran, E. K., & Stock, W. (2015) · Blood · doi:10.1182/blood-2014-11-551481 · Cited by 124
Targeting T cell malignancies using CAR-based immunotherapy: challenges and potential solutions
Fleischer, L. C., Spencer, H. T., & Raikar, S. S. (2019) · Journal of Hematology & Oncology · doi:10.1186/s13045-019-0801-y · Cited by 127
Conery, A. R., Centore, R. C., Neiss, A., Keller, P. J., Joshi, S., Spillane, K. L., Sandy, P., Hatton, C., Pardo, E., Zawadzke, L. E., et al. (2016) · eLife · doi:10.7554/elife.10483 · Cited by 129
Proteolysis targeting chimeras (PROTACs) are emerging therapeutics for hematologic malignancies
He, Y., Khan, S., Huo, Z., Lv, D., Zhang, X., Liu, X., Yuan, Y., Hromas, R., Xu, M., Zheng, G., et al. (2020) · Journal of Hematology & Oncology · doi:10.1186/s13045-020-00924-z · Cited by 126
“Abbreviations ABC-DLBCL: Activated B cell-like diffused large B cell lymphoma; AbPROTACs: Antibody-PROTAC conjugates; ADC: Antibody-drug conjugate; ALK: Anaplastic lymphoma kinase; AML: Acute myeloid leukemia; AR: Androgen receptor; BTK: Bruton’s tyrosine kinase; BAF: BRG-/BRMassociated factor; Bcl-2: B cell lymphoma…”
BackgroundTargeting EZH2 and PRC2 dependence as novel anticancer therapy
Xu, B., Konze, K. D., Jin, J. J., & Wang, G. G. (2015) · Experimental Hematology · doi:10.1016/j.exphem.2015.05.001 · Cited by 125
“Deletion of UTX significantly accelerated tumor progression in a NOTCH1 mutation-induced T-ALL model [80], whereas restoration of UTX expression in UTXmutated T-ALL cell lines induced apoptosis and suppressed tumor growth [81].”
BackgroundInfluentialTreatment of Childhood Acute Lymphoblastic Leukemia: Prognostic Factors and Clinical Advances
Vrooman, L. M., & Silverman, L. B. (2016) · Current Hematologic Malignancy Reports · doi:10.1007/s11899-016-0337-y · Cited by 136
Silveira, A. B., Kasper, L. H., Fan, Y., Jin, H., Wu, G., Shaw, T. I., Zhu, X., Larson, J. D., Easton, J. B., Shao, Y., et al. (2019) · Acta Neuropathologica · doi:10.1007/s00401-019-01975-4 · Cited by 129
Self-citationMutational spectrum of adult T-ALL
Neumann, M., Vosberg, S., Schlee, C., Heesch, S., Schwartz, S., Gökbuget, N., Hoelzer, D. F., Graf, A., Krebs, S., Bartram, I., et al. (2014) · Oncotarget · doi:10.18632/oncotarget.2218 · Cited by 127
“We were unable to confirm the high mutation rate in the PRC2 members described for pediatric patients, but we frequently found mutations in regulators of DNA methylation, possibly related to preexisting lesions in hematopoietic progenitors in the elderly[22,54].”
InfluentialETV6 in hematopoiesis and leukemia predisposition
Hock, H. R., & Shimamura, A. (2017) · Seminars in Hematology · doi:10.1053/j.seminhematol.2017.04.005 · Cited by 121
“One patient had pre-B ALL followed by MDS and AML.”
BackgroundInfluentialA new genomic framework to categorize pediatric acute myeloid leukemia
Umeda, M., Ma, J., Westover, T., Ni, Y., Song, G., Maciaszek, J. L., Rusch, M., Rahbarinia, D., Foy, S. G., Huang, B. J., et al. (2024) · Nature Genetics · doi:10.1038/s41588-023-01640-3 · Cited by 126
“These findings further suggest a continuum with other immature leukemias, such as early T cell precursor-ALL and mixed phenotype acute leukemias (T/My) with similar mutational features 72,73 .”
ResultSelf-citationGenomic Characterization of Childhood Acute Lymphoblastic Leukemia
Mullighan, C. G. (2013) · Seminars in Hematology · doi:10.1053/j.seminhematol.2013.10.001 · Cited by 122
“The mutational spectrum of ETP ALL is similar to that observed in myeloid leukemias, and the transcriptional profile of ETP ALL is similar to that of normal and malignant human hematopoietic stem cells and myeloid progenitors, but not the normal human early T-cell precursor (10).”
BackgroundMethodResultInfluentialSelf-citationConter, V., Valsecchi, M. G., Buldini, B., Parasole, R., Locatelli, F., Colombini, A., Rizzari, C., Putti, M. C., Barisone, E., Nigro, L. L., et al. (2016) · The Lancet Haematology · doi:10.1016/s2352-3026(15)00254-9 · Cited by 120
Self-citationEmerging epigenetic-modulating therapies in lymphoma
Sermer, D. J., Pasqualucci, L., Wendel, H., Melnick, A. M., & Younes, A. (2019) · Nature Reviews Clinical Oncology · doi:10.1038/s41571-019-0190-8 · Cited by 125
A complex Polycomb issue: the two faces of EZH2 in cancerPreprint
Hock, H. R. (2012) · Genes & Development · doi:10.1101/gad.191163.112 · Cited by 124
“(2012) unequivocally demonstrate that disruption of EZH2 is sufficient to cause T-ALL in mice, and three concurrent studies implicate PRC2 in human T-ALL (Ntziachristos et al. 2012; Simon et al. 2012; Zhang et al. 2012).”
BackgroundInfluentialJAK-STAT signaling in human disease: From genetic syndromes to clinical inhibition
Luo, Y., Alexander, M. T., Gadina, M., O’Shea, J. J., Meylan, F., & Schwartz, D. M. (2021) · Journal of Allergy and Clinical Immunology · doi:10.1016/j.jaci.2021.08.004 · Cited by 121
The evolution of acute lymphoblastic leukemia research and therapy at MD Anderson over four decades
Jabbour, E. J., Short, N. J., Jain, N., Haddad, F., Welch, M. A., Ravandi, F., & Kantarjian, H. M. (2023) · Journal of Hematology & Oncology · doi:10.1186/s13045-023-01409-5 · Cited by 123
Roberts, K. G., Yang, Y., Payne-Turner, D., Lin, W., Files, J. K., Dickerson, K. M., Gu, Z., Taunton, J., Janke, L. J., Chen, T., et al. (2017) · Europe PMC (PubMed Central) · doi:10.1182/bloodadvances.2017011296 · Cited by 118
Self-citationPiva, F., Santoni, M., Matrana, M. R., Satti, S., Giulietti, M., Occhipinti, G., Massari, F., Liang Cheng, C., Antonio Lopez-beltran, B., Scarpelli, M., et al. (2015) · Expert Review of Molecular Diagnostics · doi:10.1586/14737159.2015.1068122 · Cited by 116
“SETD2 has been found to act as tumor-suppressor gene in patients with breast cancer and leukemias [30,31].”
BackgroundTargeting the PI3K/mTOR Pathway in Pediatric Hematologic Malignancies
Tasian, S. K., Teachey, D. T., & Rheingold, S. R. (2014) · Frontiers in Oncology · doi:10.3389/fonc.2014.00108 · Cited by 114
“Correlation of mutation status with clinical outcomes data revealed that T-ALL patients with complete deletions of PTEN were far more likely to experience induction failure (>25% residual leukemia after 1 month of chemotherapy) than those with mutated PTEN (7).”
BackgroundInfluentialCai, H., Kumar, N., Bagheri, H. C., von Mering, C., Robinson, M. D., & Baudis, M. (2014) · BMC Genomics · doi:10.1186/1471-2164-15-82 · Cited by 111
Pérez-Andreu, V., Roberts, K. G., Xu, H. Y., Smith, C. J., Zhang, H., Yang, W., Harvey, R. C., Payne-Turner, D., Devidas, M., Cheng, I.-M., et al. (2014) · Blood · doi:10.1182/blood-2014-09-595744 · Cited by 113
“GATA3 encodes for a transcription factor critical for lymphoid cell lineage commitment and early T-cell differentiation,(48) and loss-offunction somatic mutations have been discovered in early T-cell precursor ALL.(49) Germline polymorphisms in GATA3, however, appear more important for B-cell malignancies.”
BackgroundInfluentialSelf-citationPetit, A., Trinquand, A., Chevret, S., Ballerini, P. F., Cayuela, J., Grardel, N., Touzart, A., Brethon, B., Lapillonne, H., Schmitt, C., et al. (2017) · Blood · doi:10.1182/blood-2017-04-778829 · Cited by 112
Super-enhancers: critical roles and therapeutic targets in hematologic malignancies
Jia, Y., Chng, W. J., & Zhou, J. (2019) · Journal of Hematology & Oncology · doi:10.1186/s13045-019-0757-y · Cited by 120
The genomic landscape of acute lymphoblastic leukemia in children and young adults
Mullighan, C. G. (2014) · Hematology · doi:10.1182/asheducation-2014.1.174 · Cited by 111
“Over the last decade, there have been extensive efforts to use genome-wide profiling of genomic alterations in ALL to: (1) identify additional subtypes of ALL in cases lacking known aneuploidy or chromosomal rearrangements on cytogenetic analysis; (2) characterize the constellations of genetic alterations that define…”
BackgroundSelf-citationBlackburn, J. S., Liu, S., Wilder, J. L., Dobrinski, K. P., Lobbardi, R., Moore, F. E., Martinez, S. A., Chen, E. Y., Lee, C., & Langenau, D. M. (2014) · Cancer Cell · doi:10.1016/j.ccr.2014.01.032 · Cited by 111
“Additionally, RAS is known to activate the PI3K/Akt signaling cascade and is activated in a subset of human T-ALL (Kawamura et al., 1999; Trinquand et al., 2013; Zhang et al., 2012).”
BackgroundMaslah, N., Cassinat, B., Verger, E., Kiladjian, J., & Velazquez, L. (2017) · Leukemia · doi:10.1038/leu.2017.139 · Cited by 111
Novel biological insights in T-cell acute lymphoblastic leukemia
Durinck, K., Goossens, S., Peirs, S., Wallaert, A., Loocke, W. V., Matthijssens, F., Pieters, T., Milani, G., Lammens, T., Rondou, P., et al. (2015) · Experimental Hematology · doi:10.1016/j.exphem.2015.05.017 · Cited by 111
“These studies showed that the genetic landscape of immature T-ALL is highly heterogeneous, with aberrant expression of the MEF2C gene [23,24]; genetic alterations in hematopoietic transcription factors such as RUNX1, GATA3, BCL11B, PU.1, and ETV6 [24]; activating mutations in critical mediators of cytokine receptor an…”
BackgroundInfluentialPredicting relapse risk in childhood acute lymphoblastic leukaemia
Teachey, D. T., & Hunger, S. P. (2013) · British Journal of Haematology · doi:10.1111/bjh.12442 · Cited by 117
Self-citationEarly lesions of follicular lymphoma: a genetic perspective
Mamessier, É., Song, J. Y., Eberle, F. C., Pack, S., Drevet, C., Chetaille, B., Abdullaev, Z., Adélaı̈de, J., Birnbaum, D., Chaffanet, M., et al. (2013) · Haematologica · doi:10.3324/haematol.2013.094474 · Cited by 112
“Sixty-seven of them (~6%) were known oncogenes, 6 of which (BCL2, RUNX1, NACA (26), CARD11 (27), ELN (28) & IKZF1 (29)) previously identified as major players in leukemia/lymphoma oncogenesis (Supplemental Table S3).”
BackgroundAntonysamy, S., Condon, B., Druzina, Z., Bonanno, J. B., Gheyi, T., Zhang, F., MacEwan, I. J., Zhang, A., Ashok, S., Rodgers, L. A., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0084147 · Cited by 116
Neumann, M., Coskun, E., Fransecky, L. R., Mochmann, L. H., Bartram, I., Sartangi, N. F., Heesch, S., Gökbuget, N., Schwartz, S., Brandts, C., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0053190 · Cited by 108
“FLT3 mutations, although in a lower frequency (14%), occurred exclusively in ETP-ALL [6].”
BackgroundInfluentialBurkhardt, B., & Hermiston, M. L. (2019) · British Journal of Haematology · doi:10.1111/bjh.15793 · Cited by 104
“It occurs in 10–15% of patients with T-ALL and is defined by expression of CD7 and low level CD5 (and occasionally cytoplasmic CD3) and absence of CD1a, CD4 and CD8 expression (Coustan-Smith et al, 2009a; Zhang et al, 2012; You et al, 2015).”
BackgroundSelf-citationGökbuget, N., Boissel, N., Chiaretti, S., Dombret, H., Doubek, M., Fielding, A. K., Foà, R., Giebel, S., Hoelzer, D. F., Hunault, M., et al. (2024) · Blood · doi:10.1182/blood.2023020794 · Cited by 116
“ETP-ALL 10 is genetically heterogeneous, with mutations of multiple pathways including hematopoietic and lymphoid development, Ras, cytokine receptor, and kinase signaling, and loss-of-function mutations targeting epigenetic regulators 17,18 .”
BackgroundRecurrent JAK1 and JAK3 somatic mutations in T-cell prolymphocytic leukemia
Bellanger, D., Jacquemin, V., Chopin, M., Pierron, G., Bernard, O., Ghysdael, J., & Stern, M. (2013) · Leukemia · doi:10.1038/leu.2013.271 · Cited by 105
An epigenetic gateway to brain tumor cell identity
Mack, S. C., Hubert, C. G., Miller, T. E., Taylor, M. D., & Rich, J. N. (2015) · Nature Neuroscience · doi:10.1038/nn.4190 · Cited by 106
HOXA9 Cooperates with Activated JAK/STAT Signaling to Drive Leukemia Development
de Bock, C. E., Demeyer, S., Degryse, S., Verbeke, D., Sweron, B., Gielen, O., Vandepoel, R., Vicente, C., Bempt, M. V., Dagklis, A., et al. (2018) · Cancer Discovery · doi:10.1158/2159-8290.cd-17-0583 · Cited by 103
“RESULTS JAK3 Mutations Are Significantly Associated with HOXA+ T-ALL Cases Based on results of large-scale sequencing studies in T-ALL (4, 5, 8, 9, 20), it is becoming clear that some mutations frequently co-occur, whereas others are mutually exclusive.”
BackgroundSelf-citationCancer genome-sequencing study design
Mwenifumbo, J. C., & Marra, M. A. (2013) · Nature Reviews Genetics · doi:10.1038/nrg3445 · Cited by 104
Early T-cell precursor acute lymphoblastic leukaemia
Haydu, J. E., & Ferrando, A. A. (2013) · Current Opinion in Hematology · doi:10.1097/moh.0b013e3283623c61 · Cited by 101
Biologic and Therapeutic Implications of Genomic Alterations in Acute Lymphoblastic Leukemia
Iacobucci, I., Kimura, S., & Mullighan, C. G. (2021) · Journal of Clinical Medicine · doi:10.3390/jcm10173792 · Cited by 106
Self-citationThatikonda, V., Islam, S. M. A., Autry, R. J., Jones, B. C., Gröbner, S. N., Warsow, G., Hutter, B., Hüebschmann, D., Fröhling, S., Kool, M., et al. (2023) · Nature Cancer · doi:10.1038/s43018-022-00509-4 · Cited by 100
Cross-Species Genomics Identifies TAF12, NFYC, and RAD54L as Choroid Plexus Carcinoma Oncogenes
Tong, Y., Merino, D. M., Nimmervoll, B. V., Gupta, K., Wang, Y., Finkelstein, D., Dalton, J., Ellison, D. W., Ma, X., Zhang, J., et al. (2015) · Cancer Cell · doi:10.1016/j.ccell.2015.04.005 · Cited by 98
Self-citationBentley, V. L., Veinotte, C. J., Corkery, D., Pinder, J. B., LeBlanc, M. A., Bedard, K., Weng, A. P., Berman, J. N., & Dellaire, G. (2014) · Haematologica · doi:10.3324/haematol.2014.110742 · Cited by 99
Tasian, S. K., & Hunger, S. P. (2016) · British Journal of Haematology · doi:10.1111/bjh.14474 · Cited by 101
“As in other ALL subtypes, frequent activating mutations in RAS pathway and cytokine receptor signalling genes, IL7R pathway genes and haematopoietic development and histone modification genes have been reported in ETP-ALL (Zenatti et al, 2011; Zhang et al, 2012).”
BackgroundSelf-citationOrchestration of H3K27 methylation: mechanisms and therapeutic implication
Pan, M., Hsu, M., Chen, L., & Hung, W. (2017) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-017-2596-8 · Cited by 111
Treanor, L. M., Zhou, S., Janke, L. J., Churchman, M. L., Ma, Z., Lu, T., Chen, S.-C., Mullighan, C. G., & Sorrentino, B. P. (2014) · The Journal of Experimental Medicine · doi:10.1084/jem.20122727 · Cited by 98
“To determine whether these IL7R mutations are oncogenic drivers in ETP-ALL, DN thymocytes from Arf/ mice were transduced with MSCV vectors that expressed murine homologues of either of two IL7R mutations identified in human ETP-ALL, IL7R-241-242TC and IL7R-GCinsL243 (Zhang et al., 2012).”
BackgroundInfluentialSelf-citationThe neoepitope landscape in pediatric cancers
Chang, T., Carter, R. A., Li, Y., Li, Y., Wang, H., Edmonson, M. N., Chen, X. '., Arnold, P. Y., Geiger, T. L., Wu, G., et al. (2017) · Genome Medicine · doi:10.1186/s13073-017-0468-3 · Cited by 99
“The sequencing, alignment against human reference genome using BWA [31, 32], and the identification and validation of somatic alterations including missense mutations and gene fusions were described previously [33, 34].”
MethodSelf-citationNew Approaches to the Management of Adult Acute Lymphoblastic Leukemia
Bassan, R., Bourquin, J., DeAngelo, D. J., & Chiaretti, S. (2018) · Journal of Clinical Oncology · doi:10.1200/jco.2017.77.3648 · Cited by 100
EZH2 abnormalities in lymphoid malignancies: underlying mechanisms and therapeutic implications
Li, B., & Chng, W. J. (2019) · Journal of Hematology & Oncology · doi:10.1186/s13045-019-0814-6 · Cited by 101
Extracellular assembly and activation principles of oncogenic class III receptor tyrosine kinases
Verstraete, K., & Savvides, S. N. (2012) · Nature reviews. Cancer · doi:10.1038/nrc3371 · Cited by 102
Canté-Barrett, K., Spijkers-Hagelstein, J. A. P., Buijs-Gladdines, J. G. C. A. M., Uitdehaag, J. C. M., Smits, W. K., van der Zwet, J., Buijsman, R. C., Zaman, G. J. R., Pieters, R., & Meijerink, J. P. P. (2016) · Leukemia · doi:10.1038/leu.2016.83 · Cited by 94
Metadata
- Authors
- Zhang, J., Ding, L., Holmfeldt, L., Wu, G., Heatley, S. L., Payne-Turner, D., Easton, J., Chen, X., Wang, J., Rusch, M., Lu, C., Chen, S.-C., Wei, L., Collins-Underwood, J. R., Ma, J., Roberts, K. G., Pounds, S. B., Ulyanov, A., Becksfort, J., Gupta, P., Huether, R., Kriwacki, R. W., Parker, M., McGoldrick, D. J., Zhao, D., Alford, D., Espy, S., Bobba, K. C., Song, G., Pei, D., Cheng, C., Roberts, S., Barbato, M. I., Campana, D., Coustan-Smith, E., Shurtleff, S. A., Raimondi, S. C., Kleppe, M., Cools, J., Shimano, K. A., Hermiston, M. L., Doulatov, S., Eppert, K., Laurenti, E., Notta, F., Dick, J. E., Basso, G., Hunger, S. P., Loh, M. L., Devidas, M., Wood, B., Winter, S., Dunsmore, K. P., Fulton, R. S., Fulton, L. L., Hong, X., Harris, C. C., Dooling, D. J., Ochoa, K., Johnson, K. J., Obenauer, J. C., Evans, W. E., Pui, C.-H., Naeve, C. W., Ley, T. J., Mardis, E. R., Wilson, R. K., Downing, J. R., & Mullighan, C. G.
- Affiliations
- St. Jude Children's Research Hospital (US)
- Washington University in St. Louis (US)
- KU Leuven (BE)
- University of California, San Francisco (US)
- University Health Network (CA)
- University of Padua (IT)
- Children's Hospital Colorado (US)
- University of Florida Health (US)
- Seattle Children's Hospital (US)
- University of New Mexico (US)
- Corresponding author
- Downing, James R.
- Mullighan, Charles G.
- ORCID
- Zhang, Jinghui
- Ding, Li
- Holmfeldt, Linda
- Wu, Gang
- Payne-Turner, Debbie
- Easton, John
- Chen, Xiang
- Wang, Jianmin
- Rusch, Michael
- Lu, Charles
- Chen, Shann-Ching
- Wei, Lei
- Ma, Jing
- Roberts, Kathryn G.
- Pounds, Stanley B.
- Ulyanov, Anatoly
- Becksfort, Jared
- Gupta, Pankaj
- Huether, Robert
- Kriwacki, Richard W.
- Parker, Matthew
- Zhao, David
- Espy, Stephen
- Song, Guangchun
- Cheng, Cheng
- Barbato, Michael I.
- Campana, Dario
- Raimondi, Susana C.
- Cools, Jan
- Shimano, Kristin A.
- Hermiston, Michelle L.
- Doulatov, Sergei
- Eppert, Kolja
- Laurenti, Elisa
- Notta, Faiyaz
- Dick, John E.
- Basso, Giuseppe
- Hunger, Stephen P.
- Loh, Mignon L.
- Devidas, Meenakshi
- Wood, Brent
- Winter, Stuart
- Fulton, Robert S.
- Fulton, Lucinda L.
- Johnson, Kimberly J.
- Obenauer, John C.
- Evans, William E.
- Pui, Ching-Hon
- Ley, Timothy J.
- Mardis, Elaine R.
- Wilson, Richard K.
- Downing, James R.
- Mullighan, Charles G.
- Venue
- Nature
- Published
- 2012-01
- Volume
- 481
- Issue
- 7380
- Pages
- 157-163
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- PMC
- PMC3267575
- OpenAlex
- W2060605982
- Cited by
- 1,596
- References
- 45
- Citations by year
- 2026: 28 · 2025: 61 · 2024: 85 · 2023: 72 · 2022: 98 · 2021: 131 · 2020: 106 · 2019: 123 · 2018: 100 · 2017: 119 · 2016: 138 · 2015: 122 · 2014: 156 · 2013: 162 · 2012: 90
- FWCI
- 164.44
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Nature (publishedVersion, cc-by-nc-sa)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Padua Research Archive (University of Padova) (submittedVersion, cc-by-nc-sa)
- RePEc: Research Papers in Economics (submittedVersion)
- Adelaide Research & Scholarship (AR&S) (University of Adelaide) (submittedVersion)
- Funders
- Alex's Lemonade Stand Foundation for Childhood Cancer
- Washington University in St. Louis
- American Lebanese Syrian Associated Charities (CA021765)
- Alvin J. Siteman Cancer Center
- Children’s Oncology Group
- National Institutes of Health (CA 021765, CA98543)
- National Human Genome Research Institute (U54HG003079, HG003079, NHGRI U54 HG003079)
- National Cancer Institute (CA114766, CA‐98413, U10CA098413, U24CA114766, CA021765, U10CA098543, CA-98543, R25CA023944, T32CA128583, P30CA021765)
- National Institute of General Medical Sciences (U01GM92666, U01GM092666)
- Topics
- Health Sciences › Medicine › Hematology › Acute Lymphoblastic Leukemia research
- Health Sciences › Medicine › Hematology › Acute Myeloid Leukemia Research
- Health Sciences › Medicine › Pathology and Forensic Medicine › Lymphoma Diagnosis and Treatment
- Keywords
- somatic mutations, Ras signaling, cytokine receptor signalling, chromosomal rearrangements, mutation spectrum, high-dose cytarabine, gene expression profiling, hematopoietic stem cells, pediatric leukemia
- MeSH terms
- Reelin Protein, Child, Hematopoiesis, Histones, Humans, Molecular Sequence Data, Mutation, Genes, ras, Stem Cells, T-Lymphocytes, Translocation, Genetic, Signal Transduction, Leukemia, Myeloid, Acute, Genome, Human, Sequence Analysis, DNA, Age of Onset, Genetic Predisposition to Disease, Receptors, Interleukin-7, Genomics, Janus Kinases, Precursor T-Cell Lymphoblastic Leukemia-Lymphoma, DNA Copy Number Variations
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