Born to run: control of transcription elongation by RNA polymerase II

High-Resolution Profiling of Histone Methylations in the Human Genome

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Histone H3K27ac separates active from poised enhancers and predicts developmental state

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Selective Inhibition of Tumor Oncogenes by Disruption of Super-Enhancers

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Nascent RNA Sequencing Reveals Widespread Pausing and Divergent Initiation at Human Promoters

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A Chromatin Landmark and Transcription Initiation at Most Promoters in Human Cells

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Mediator and cohesin connect gene expression and chromatin architecture

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Twenty-Five Years of the Nucleosome, Fundamental Particle of the Eukaryote Chromosome

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The multifaceted roles of PARP1 in DNA repair and chromatin remodelling

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Dynamic Regulation of Nucleosome Positioning in the Human Genome

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A map of the cis-regulatory sequences in the mouse genome

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The Bromodomain Protein Brd4 Is a Positive Regulatory Component of P-TEFb and Stimulates RNA Polymerase II-Dependent Transcription

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Histone H3 Methylation by Set2 Directs Deacetylation of Coding Regions by Rpd3S to Suppress Spurious Intragenic Transcription

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c-Myc Regulates Transcriptional Pause Release

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Architectural protein subclasses shape 3D organization of genomes during lineage commitment

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Recruitment of P-TEFb for Stimulation of Transcriptional Elongation by the Bromodomain Protein Brd4

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Genome-Scale Identification of Nucleosome Positions in S. cerevisiae

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The COMPASS Family of Histone H3K4 Methylases: Mechanisms of Regulation in Development and Disease Pathogenesis

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The selection and function of cell type-specific enhancers

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Roles of eukaryotic topoisomerases in transcription, replication and genomic stability

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Histone exchange, chromatin structure and the regulation of transcription

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The Mediator complex: a central integrator of transcription

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R-Loop Formation Is a Distinctive Characteristic of Unmethylated Human CpG Island Promoters

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Targeting transcription regulation in cancer with a covalent CDK7 inhibitor

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Precise Maps of RNA Polymerase Reveal How Promoters Direct Initiation and Pausing

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A Topoisomerase IIß-Mediated dsDNA Break Required for Regulated Transcription

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NELF, a Multisubunit Complex Containing RD, Cooperates with DSIF to Repress RNA Polymerase II Elongation

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Coupling mRNA processing with transcription in time and space

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Human Senataxin Resolves RNA/DNA Hybrids Formed at Transcriptional Pause Sites to Promote Xrn2-Dependent Termination

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The SET-domain protein superfamily: protein lysine methyltransferases.

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H3.3/H2A.Z double variant–containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions

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RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

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RNA polymerase is poised for activation across the genome

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DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs

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Intragenic DNA methylation prevents spurious transcription initiation

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Evidence for nucleosome depletion at active regulatory regions genome-wide

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Nucleosome organization in the Drosophila genome

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7SK small nuclear RNA binds to and inhibits the activity of CDK9/cyclin T complexes

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Histone H2B Monoubiquitination Functions Cooperatively with FACT to Regulate Elongation by RNA Polymerase II

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The Paf1 Complex Is Required for Histone H3 Methylation by COMPASS and Dot1p: Linking Transcriptional Elongation to Histone Methylation

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Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation

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Activity-Induced DNA Breaks Govern the Expression of Neuronal Early-Response Genes

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The 7SK small nuclear RNA inhibits the CDK9/cyclin T1 kinase to control transcription

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PARPs and ADP-ribosylation: recent advances linking molecular functions to biological outcomes

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The RNA polymerase II molecule at the 5′ end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged

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Determinants of nucleosome organization in primary human cells

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Control of RNA Polymerase II Elongation Potential by a Novel Carboxyl-terminal Domain Kinase

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The Language of Histone Crosstalk

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Transcription regulation by the Mediator complex

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Genome-wide dynamics of Pol II elongation and its interplay with promoter proximal pausing, chromatin, and exons

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CBP-mediated acetylation of histone H3 lysine 27 antagonizesDrosophilaPolycomb silencing

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AFF4, a Component of the ELL/P-TEFb Elongation Complex and a Shared Subunit of MLL Chimeras, Can Link Transcription Elongation to Leukemia

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RNA Polymerase II Elongation Control

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Prevalent, Dynamic, and Conserved R-Loop Structures Associate with Specific Epigenomic Signatures in Mammals

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Topoisomerase I suppresses genomic instability by preventing interference between replication and transcription

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The Brd4 Extraterminal Domain Confers Transcription Activation Independent of pTEFb by Recruiting Multiple Proteins, Including NSD3

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A chromatin localization screen reveals poly (ADP ribose)-regulated recruitment of the repressive polycomb and NuRD complexes to sites of DNA damage

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XPB, a subunit of TFIIH, is a target of the natural product triptolide

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The code and beyond: transcription regulation by the RNA polymerase II carboxy-terminal domain

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Understanding nucleosome dynamics and their links to gene expression and DNA replication

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BET Bromodomain Proteins Function as Master Transcription Elongation Factors Independent of CDK9 Recruitment

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Flavopiridol Inhibits P-TEFb and Blocks HIV-1 Replication

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G-quadruplex structures are stable and detectable in human genomic DNA

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Enhancer RNA Facilitates NELF Release from Immediate Early Genes

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Nucleosome Remodeling Induced by RNA Polymerase II

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Histone Crosstalk between H2B Monoubiquitination and H3 Methylation Mediated by COMPASS

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The MLL3/MLL4 Branches of the COMPASS Family Function as Major Histone H3K4 Monomethylases at Enhancers

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Topoisomerases facilitate transcription of long genes linked to autism

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The interaction between HIV-1 Tat and human cyclin T1 requires zinc and a critical cysteine residue that is not conserved in the murine CycT1 proteinPreprint

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P-TEFb-mediated phosphorylation of hSpt5 C-terminal repeats is critical for processive transcription elongation.

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Pausing of RNA Polymerase II Disrupts DNA-Specified Nucleosome Organization to Enable Precise Gene Regulation

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Profile of Histone Lysine Methylation across Transcribed Mammalian Chromatin

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Structural basis of transcription initiation by RNA polymerase II

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Mediator kinase inhibition further activates super-enhancer-associated genes in AML

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HIV-1 Tat and Host AFF4 Recruit Two Transcription Elongation Factors into a Bifunctional Complex for Coordinated Activation of HIV-1 Transcription

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The Paf1 Complex Is Essential for Histone Monoubiquitination by the Rad6-Bre1 Complex, Which Signals for Histone Methylation by COMPASS and Dot1p

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Cyclin-dependent kinase control of the initiation-to-elongation switch of RNA polymerase II

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Enhancer-associated H3K4 monomethylation by Trithorax-related, the <i>Drosophila</i> homolog of mammalian Mll3/Mll4

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R-loops induce repressive chromatin marks over mammalian gene terminators

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Nucleosomes Are Context-Specific, H2A.Z-Modulated Barriers to RNA Polymerase

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HIV-1 Tat Assembles a Multifunctional Transcription Elongation Complex and Stably Associates with the 7SK snRNP

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BRD4 is an atypical kinase that phosphorylates Serine2 of the RNA Polymerase II carboxy-terminal domain

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The super elongation complex (SEC) family in transcriptional control

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