Cited by 94Microtubule and mitosis dynamicsAlzheimer's disease research and treatmentsProtein Structure and Dynamics

Microtubule lattice spacing governs cohesive envelope formation of tau family proteins

Open access
Siahaan, Valerie, Tan, Ruensern, Humhalova, Tereza, Libusova, Lenka, Lacey, Samuel E., Tan, Tracy, Dacy, Mariah, Ori-McKenney, Kassandra M. +3 more·2022·Nature Chemical Biology

Published version of a preprint

Abstract

Tau is an intrinsically disordered microtubule-associated protein (MAP) implicated in neurodegenerative disease. On microtubules, tau molecules segregate into two kinetically distinct phases, consisting of either independently diffusing molecules or interacting molecules that form cohesive 'envelopes' around microtubules. Envelopes differentially regulate lattice accessibility for other MAPs, but the mechanism of envelope formation remains unclear. Here we find that tau envelopes form cooperatively, locally altering the spacing of tubulin dimers within the microtubule lattice. Envelope formation compacted the underlying lattice, whereas lattice extension induced tau envelope disassembly. Investigating other members of the tau family, we find that MAP2 similarly forms envelopes governed by lattice spacing, whereas MAP4 cannot. Envelopes differentially biased motor protein movement, suggesting that tau family members could spatially divide the microtubule surface into functionally distinct regions. We conclude that the interdependent allostery between lattice spacing and cooperative envelope formation provides the molecular basis for spatial regulation of microtubule-based processes by tau and MAP2.

AI snapshot

Written from the paper’s full text.

TL;DR

Tau and MAP2c form cooperative, cohesive envelopes on microtubules by locally compacting the tubulin lattice, whereas MAP4 does not. This lattice-spacing-dependent mechanism can spatially regulate motor proteins and is revealed in cells by taxol-induced lattice extension causing tau envelope disassembly.

Key findings

  • Tau envelope formation is cooperative, with a Hill coefficient of 1.9 ± 0.7, and preferentially occurs on compacted GDP-lattice microtubules: coverage rate was 1.6 ± 1.3 μm/s on GDP lattices versus 23.0 ± 12.8 nm/s on taxol lattices, with no envelope formation on GMPCPP lattices.
  • Tau envelopes compact the underlying lattice by 3.2 ± 1.0% and reduce SiR-tubulin intensity within enveloped regions by 21.7 ± 12.9%; cryo-EM showed ~1 Å compaction between tubulin monomers for both tau and MAP2c, while MAP4 caused no measurable compaction.
  • MAP2c behaves like tau, forming envelopes on taxol-lattice but not GMPCPP-lattice microtubules, and co-enriches with tau in shared envelopes; MAP4 does not form envelopes, is excluded from tau/MAP2c envelopes, and remains uniformly bound.
  • Mechanical lattice extension destabilizes tau envelopes: hydrodynamic bending caused ~50% tau density drop in curved regions, and optical-trap stretching increased envelope disassembly rate 2-fold. In U-2 OS cells, taxol caused tau dissociation from microtubules in all cells observed, while MAP4 remained.

Methods

  • In vitro TIRF microscopy with purified porcine brain tubulin and fluorescently labeled full-length tau, MAP2c, MAP4, kinesin-1, DDH, and KIF1A, using taxol-stabilized, GMPCPP-stabilized, and GMPCPP-capped GDP-lattice microtubules; assays included FRAP, speckle tracking, SiR-tubulin binding, 1,6-hexanediol treatment, and optical tweezers.
  • Cryo-EM of taxol-stabilized microtubules incubated with tau, MAP2c, or MAP4 to measure longitudinal lattice spacing via the 4 nm Js reflection.
  • Live-cell TIRF imaging of U-2 OS cells expressing eGFP-tau or eGFP-MAP4, with taxol or DMSO treatment and quantification by coefficient of variation and envelope fission/disassembly analysis.

Limitations

  • The paper does not state a dedicated limitations section. Evident from the text: most mechanistic work uses in vitro reconstitution with taxol- or GMPCPP-manipulated microtubules and purified proteins, which may not fully reproduce native cellular lattices.
  • Live-cell experiments use U-2 OS cells with overexpression of eGFP-tau or eGFP-MAP4 rather than neurons, and taxol is used to artificially extend lattices.
  • Cryo-EM used high MAP concentrations (27 μM tau, 28 μM MAP2c, 34 μM MAP4), and tau showed a bimodal lattice-spacing distribution, suggesting incomplete envelope coverage under those conditions.

Model-written summary. Check it against the paper before relying on it.

Integrity signals

Registry

Crossref · 10.1038/s41589-022-01096-2

Cites

94 of 94 references verified0 citation errors · 0 not checkable

Statistics

Nothing to recompute.

Claims the paper makes

31 of 32 cited sources checked · 21 supported · 0 flagged · accuracy not yet measured

  • Interpretationcitation

    The extent of tau-induced lattice compaction (3.2 ± 1.0%) is similar to the length difference between GTP- and GDP-bound tubulin dimers estimated previously by cryo-EM to be 2.4%.

    “The extent of the compaction is similar to the length difference between GTP- and GDP-bound tubulin dimers estimated previously by cryo-EM to be 2.4%1”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [1] Alushin, G. M. et al. High-resolution microtubule structures reveal the structural transitions in αβ-tubulin upon GTP hydrolysis. Cell 157, 1117–1129 (2014). source
  • Findingcitation

    Tau was highly co-enriched within tau envelopes.

    “As expected9, tau was highly co-enriched within tau envelopes”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [9] Tan, R. et al. Microtubules gate tau condensation to spatially regulate microtubule functions. Nat. Cell Biol. 21, 1078–1085 (2019). source
  • Premisecitation

    Tau envelopes can be detected by their occlusion of kinesin-1.

    “However, tau envelopes can be detected by their effect on kinesin-1, which is occluded from the envelopes28.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [28] Siahaan, V. et al. Kinetically distinct phases of tau on microtubules regulate kinesin motors and severing enzymes. Nat. Cell Biol. 21, 1086–1092 (2019). source
  • Findingown data

    After adding 0.01 μM taxol to U-2 OS cells, tau dissociated from microtubules in all cells, as quantified by a decrease in the coefficient of variation of the tau signal.

    “We added 0.01 μM taxol to the medium and imaged the cells for 10 minutes while monitoring the tau density on microtubules initially fully covered by eGFP-tau. In line with our in vitro observations, and previous in vivo evidence33,35, we observed that in all cells tau dissociated from the microtubules (Fig. 4a, Supplementary Movie 9) as quantified by the decrease in the coefficient of variation of”
    Quote in the paperSubstantial claim2 of 2 sources checked
    • cites [33] Samsonov, A., Yu, J.-Z., Rasenick, M. & Popov, S. V. Tau interaction with microtubules in vivo. J. Cell Sci. 117, 6129–6141 (2004). source
    • cites [35] Ettinger, A., van Haren, J., Ribeiro, S. A. & Wittmann, T. Doublecortin is excluded from growing microtubule ends and recognizes the GDP-microtubule lattice. Curr. Biol. 26, 1549–1555 (2016). source
  • Findingcitation

    In the remaining 6% of cells, exhibiting weak eGFP-tau expression, tau only localized to the microtubule bends.

    “In the remaining 6% of cells, exhibiting weak eGFP-tau expression, tau only localized to the microtubule bends, as described previously33,34.”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [33] Samsonov, A., Yu, J.-Z., Rasenick, M. & Popov, S. V. Tau interaction with microtubules in vivo. J. Cell Sci. 117, 6129–6141 (2004). source

      In “Binding of tau to individual MTs depends on their curvature” (page unavailable), the paper reports more GFP-tau at highly curved regions. It also reports GFP-tau labeling on relatively straight microtubules, so localization was not limited to bends. The passages do not support the figure of 6% of cells with weak expression. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
    • cites [34] Balabanian, L., Berger, C. L. & Hendricks, A. G. Acetylated microtubules are preferentially bundled leading to enhanced kinesin-1 motility. Biophys. J. 113, 1551–1560 (2017). source

      The section “Tau is enriched on curved microtubule segments” (page unavailable) reports preferential tau localization at bends in extracted cytoskeletal networks and notes that localization on curved microtubules has been observed in living cells. It does not report a 6% subgroup, weak eGFP-tau expression, or localization only at bends. (LLM, conf=0.88)

      Experimental — accuracy not yet measured
  • May combine two claims. 46
  • Classified as probably not a substantial claim. 13
  • The quote only partly states this claim. 2
  • May combine two claims.

    Premisecitation

    Tau envelopes form on GDP microtubule lattices but do not form on GMPCPP-stabilized microtubules.

    “Previously, we observed that tau envelopes form on GDP microtubule lattices but do not form on microtubules stabilized with GMPCPP9.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [9] Tan, R. et al. Microtubules gate tau condensation to spatially regulate microtubule functions. Nat. Cell Biol. 21, 1078–1085 (2019). source
  • May combine two claims.

    Premisecitation

    Tau molecules inside envelopes do not diffuse but remain stationary.

    “since tau molecules inside envelopes do not diffuse, but remain stationary9,28.”
    Quote in the paperSubstantial claim2 of 2 sources checked
    • cites [9] Tan, R. et al. Microtubules gate tau condensation to spatially regulate microtubule functions. Nat. Cell Biol. 21, 1078–1085 (2019). source

      The passage describing single-molecule behavior says tau becomes statically bound at condensate boundaries, supporting the stationary characterization. But it also reports a nonzero diffusion coefficient within condensates (4×10−4 µm²/s), so the absolute claim that molecules inside them do not diffuse overstates the result. (LLM, conf=0.88)

      Experimental — accuracy not yet measured
    • cites [28] Siahaan, V. et al. Kinetically distinct phases of tau on microtubules regulate kinesin motors and severing enzymes. Nat. Cell Biol. 21, 1086–1092 (2019). source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Interpretationcitation

    These results are consistent with prior data showing competition between tau and taxol for microtubules.

    “These results are consistent with prior data showing competition between tau and taxol for microtubules31.”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [31] Kar, S., Fan, J., Smith, M. J., Goedert, M. & Amos, L. A. Repeat motifs of tau bind to the insides of microtubules in the absence of taxol. EMBO J. 22, 70–77 (2003). source
  • May combine two claims.

    Findingown data

    The MAP2c level outside of envelopes was identical to that on GMPCPP-lattice microtubules, similar to tau.

    “Quantification of MAP intensity on both types of lattices revealed that the MAP2c level outside of the envelopes was identical to that on GMPCPP-lattice microtubules, similar to tau9.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [9] Tan, R. et al. Microtubules gate tau condensation to spatially regulate microtubule functions. Nat. Cell Biol. 21, 1078–1085 (2019). source

      The passage discussing Fig. 1i–j (page unavailable) reports diffuse tau binding on both taxol-stabilized and GMP-CPP microtubules, with condensates forming only on the former. This supports the broad comparison to tau, but the cited paper does not state that tau intensity outside condensates was identical to its intensity on GMP-CPP microtubules. The MAP2c measurement is the citing authors’ own result, not a result attributed to this source. (LLM, conf=0.78)

      Experimental — accuracy not yet measured
  • May combine two claims.

    Findingown data

    MAP2c envelopes dissolved when exposed to 1,6-hexanediol, but the diffusive fraction of MAP2c molecules remained unchanged.

    “Similar to tau9, MAP2c envelopes dissolved when exposed to 1,6-HD, but the diffusive fraction of MAP2c molecules remained unchanged”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [9] Tan, R. et al. Microtubules gate tau condensation to spatially regulate microtubule functions. Nat. Cell Biol. 21, 1078–1085 (2019). source
  • Classified as probably not a substantial claim.

    Premisecitation

    1,6-Hexanediol disrupts phase separated systems in a variety of biological contexts.

    “Tau envelopes are sensitive to the aliphatic alcohol 1,6-hexanediol (1,6-HD), a compound that disrupts phase separated systems in a variety of biological contexts9”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [9] Tan, R. et al. Microtubules gate tau condensation to spatially regulate microtubule functions. Nat. Cell Biol. 21, 1078–1085 (2019). source

      The paper’s Abstract (page not available in our copy) reports that 1,6-hexanediol rapidly dissolved microtubule-bound tau condensates and notes that it has been shown to dissolve tau droplets formed by liquid–liquid phase separation. This supports the effect on tau systems, but the paper does not establish that it disrupts phase-separated systems across a variety of biological contexts. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Interpretationcitation

    The modest effect of MAP4 on the DDH landing rate may be consistent with prior results suggesting MAP4 could inhibit dynein-based movements.

    “The modest effect of MAP4 on the DDH landing rate may be consistent with prior results18,19, which suggested MAP4 could inhibit dynein-based movements.”
    Quote in the paperNot a substantial claim1 of 2 sources checked
    • cites [18] Semenova, I. et al. Regulation of microtubule-based transport by MAP4. Mol. Biol. Cell 25, 3119–3132 (2014). source
    • cites [19] Samora, C. P. et al. MAP4 and CLASP1 operate as a safety mechanism to maintain a stable spindle position in mitosis. Nat. Cell Biol. 13, 1040–1050 (2011). source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    The landing rate of dynein-dynactin complexes is strongly determined by the p150glued subunit of the dynactin complex.

    “The landing rate of dynein-dynactin complexes is strongly determined by the p150glued subunit of the dynactin complex36”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [36] McKenney, R. J., Huynh, W., Vale, R. D. & Sirajuddin, M. Tyrosination of α-tubulin controls the initiation of processive dynein–dynactin motility. EMBO J. 35, 1175–1185 (2016). source
  • May combine two claims.

    Interpretationcitation

    MAP4 adopts a conformation completely distinct from that of tau on microtubules, which may at least partially explain why MAP4 is unable to form envelopes.

    “MAP4 adopts a conformation completely distinct from that of tau41,44 on microtubules, which may at least partially explain why, unlike tau, MAP4 is unable to form envelopes.”
    Quote in the paperSubstantial claim2 of 2 sources checked
    • cites [41] Kellogg, E. H. et al. Near-atomic model of microtubule–tau interactions. Science 360, 1242–1246 (2018). source
    • cites [44] Shigematsu, H. et al. Structural insight into microtubule stabilization and kinesin inhibition by Tau family MAPs. J. Cell Biol. 217, 4155–4163 (2018). source

      The Results section (“Structural detail of MAP4–kinesin-1–microtubule binding”; page unavailable) suggests that 5R-MAP4 cannot adopt a Tau-like elongated structure in the presence of kinesin-1. It does not establish that MAP4’s conformation is completely distinct from Tau’s under all conditions, or address whether MAP4 can form envelopes. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    In non-mammalian species, microtubule lattice compaction does not appear to be directly coupled to GTP hydrolysis.

    “in non-mammalian species, microtubule lattice compaction does not appear to be directly coupled to GTP hydrolysis47,48.”
    Quote in the paperNot a substantial claim2 of 2 sources checked
    • cites [47] Howes, S. C. et al. Structural differences between yeast and mammalian microtubules revealed by cryo-EM. J. Cell Biol. 216, 2669–2677 (2017). source

      The Conclusions report that dynamic yeast microtubules did not show the compaction seen in mammalian microtubules, but say this might reflect either less GTP hydrolysis or a different conformational response. The paper therefore does not establish that compaction is uncoupled from hydrolysis, and its yeast findings do not cover non-mammalian species generally. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
    • cites [48] Chaaban, S. et al. The structure and dynamics of C. elegans tubulin reveals the mechanistic basis of microtubule growth. Dev. Cell 47, 191–204 (2018). source

      The available copy yields only a corrupted table of contents, with no readable passage addressing whether microtubule lattice compaction is coupled to GTP hydrolysis. Searches for “lattice compaction GTP hydrolysis,” “compaction,” and an uncoupled-lattice paraphrase found no decisive text. (LLM, conf=0.72)

      Experimental — accuracy not yet measured
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    Recent evidence suggests that the microtubule lattice is not conformationally homogenous, but releases and incorporates new GTP-tubulin subunits in response to mechanical damage and repair.

    “recent evidence suggests that the microtubule lattice is not conformationally homogenous, but rather releases and incorporates new GTP-tubulin subunits in response to mechanical damage and repair49.”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [49] Triclin, S. et al. Self-repair protects microtubules from destruction by molecular motors. Nat. Mater. 20, 883–891 (2021). source
  • May combine two claims.

    Premisecitation

    Mammalian tubulin within the GDP lattice primarily adopts a compacted state, whereas newly incorporated GTP tubulin adopts an expanded state.

    “Mammalian tubulin within the GDP lattice primarily adopts compacted state, whereas the newly incorporated GTP tubulin adopts an expanded state1.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [1] Alushin, G. M. et al. High-resolution microtubule structures reveal the structural transitions in αβ-tubulin upon GTP hydrolysis. Cell 157, 1117–1129 (2014). source

      The Results section (“High-resolution cryo-EM structures of dynamic and stabilized microtubules”; page unavailable) reports a shorter dimer repeat in the GDP lattice than in the expanded GMPCPP lattice, with compaction at the interface between dimers. But the study uses GMPCPP as a GTP-like analog; the Discussion (“Future Prospects”; page unavailable) cautions against treating its structure as the definitive GTP state. It therefore does not establish that newly incorporated GTP tubulin itself adopts that expanded state. (LLM, conf=0.86)

      Experimental — accuracy not yet measured
  • May combine two claims.

    Interpretationcitation

    At high levels of tau, when the lattice is fully decorated, bending of the lattice leads to local decrease in tau densities, which could be explained by disruption of the tau envelope on stretched lattice on the outer side of the bend.

    “By contrast, at high levels of tau, when the lattice is fully decorated by tau, bending of the lattice leads to local decrease in tau densities28, which could be explained by the disruption of the tau envelope on stretched lattice on the outer side of the bend.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [28] Siahaan, V. et al. Kinetically distinct phases of tau on microtubules regulate kinesin motors and severing enzymes. Nat. Cell Biol. 21, 1086–1092 (2019). source

      The Additional information figure caption (p. unavailable) reports significantly lower tau density on highly curved microtubule regions than in islands on straight regions. The paper also reports saturation at high tau concentrations, but the cited passages do not establish that bending itself causes the density decrease under those conditions. The proposed disruption of a tau envelope appears after the citation as the citing authors’ explanation, not a finding attributed to this source. (LLM, conf=0.80)

      Experimental — accuracy not yet measured
  • May combine two claims.

    Premisecitation

    MAP4 did not block the binding of a kinesin-1 motor domain to microtubules in prior experiments, while the present study shows it negatively affects KIF1A motility.

    “In prior experiments, MAP4 did not block the binding of a kinesin-1 motor domain to microtubules44, while we show that it negatively affects KIF1A motility.”
    Quote in the paperSubstantial claim1 of 1 sources checked
    • cites [44] Shigematsu, H. et al. Structural insight into microtubule stabilization and kinesin inhibition by Tau family MAPs. J. Cell Biol. 217, 4155–4163 (2018). source
  • Classified as probably not a substantial claim. May combine two claims.

    Interpretationcitation

    Kinesin binding expands the microtubule lattice, suggesting that exclusive binding may arise from competition for an expanded versus compacted lattice.

    “Apart from steric clashes between tau and kinesin9,41, kinesin binding expands the microtubule lattice4,6 suggesting that exclusive binding may arise from competition for an expanded versus compacted lattice.”
    Quote in the paperSubstantial claim3 of 3 sources checked
    • cites [4] Peet, D. R., Burroughs, N. J. & Cross, R. A. Kinesin expands and stabilizes the GDP-microtubule lattice. Nat. Nanotechnol. 13, 386–391 (2018). source
    • cites [6] Shima, T. et al. Kinesin-binding–triggered conformation switching of microtubules contributes to polarized transport. J. Cell Biol. 217, 4164–4183 (2018). source
    • cites [9] Tan, R. et al. Microtubules gate tau condensation to spatially regulate microtubule functions. Nat. Cell Biol. 21, 1078–1085 (2019). source
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Premisecitation

    KIF1A is sensitive to the nucleotide state of the microtubule lattice.

    “KIF1A, a neuronal cargo transporter critical for human health37–40 and sensitive to the nucleotide state of the microtubule lattice11.”
    Quote in the paperNot a substantial claim1 of 1 sources checked
    • cites [11] Guedes-Dias, P. et al. Kinesin-3 responds to local microtubule dynamics to target synaptic cargo delivery to the presynapse. Curr. Biol. 29, 268–282 (2019). source
  • May combine two claims.

    Findingown data

    TMR-MAP2c molecules transitioned to static binding within GFP-MAP2c envelopes, with dwell times increasing ~3-fold.

    “However, TMR-MAP2c molecules transitioned to static binding within the GFP-MAP2c envelopes (Supplementary Fig. 3a), their dwell times increasing ~3-fold”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    MAP2c colocalized with tau envelopes, where it was strongly enriched, showing that tau and MAP2c can form miscible MAP envelopes.

    “Strikingly, MAP2c colocalized with the tau envelopes, where it was strongly enriched (Fig. 3g) showing that tau and MAP2c can form miscible MAP envelopes.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    At 20 nM tau, lattice regions not covered by tau envelopes showed no compaction, while regions covered by a tau envelope showed a compaction of 3.2 ± 1.0%.

    “we found no compaction of the lattice in the regions of the microtubule not covered by tau envelopes, while the lattice regions covered by a tau envelope showed a compaction of 3.2 ± 1.0%”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    MAP4 showed homogenous FRAP behavior with a recovery time and mobile fraction comparable to envelope-associated MAP2c.

    “By contrast, MAP4 showed homogenous behavior with a recovery time and mobile fraction comparable to envelope-associated MAP2c”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    MAP2c behaves similarly to tau, forming envelopes on taxol-lattice but not on GMPCPP-lattice microtubules.

    “MAP2c behaved similarly to tau, forming envelopes on taxol-lattice but not on GMPCPP-lattice microtubules.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    After adding 60 nM tau to a straight non-stretched microtubule held between optical traps, tau envelope formation was observed and force increased due to a decrease in bead distance, indicating microtubule lattice compaction.

    “After adding 60 nM tau to the chamber we observed tau envelope formation (Fig. 2d) and, simultaneously, detected an increase in force due to a decrease in the distance between the two beads, indicating a compaction of the microtubule lattice”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    The presence of MAP2c decreased SiR-tubulin binding by over 3-fold, while MAP4 had no effect.

    “Similar to tau (Fig. 1i), the presence of MAP2c decreased SiR-tubulin binding by over 3-fold, while MAP4 had no effect”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Microtubule compaction was observed within MAP2c envelopes, but not outside, and no compaction was observed upon addition of MAP4.

    “Similar to tau, we observed compaction within MAP2c envelopes, but not outside (Fig. 3e). In contrast, we observed no microtubule compaction upon the addition of MAP4.”
    Quote in the paperSubstantial claim
  • May combine two claims. The quote only partly states this claim.

    Findingown data

    On taxol-lattice microtubules at 600 nM tau, kinesin-1 showed no movement, indicating full coverage by tau envelopes.

    “After the addition of 60 nM kinesin-1, we observed no movement of kinesin-1 on the taxol-lattice microtubules, showing that these were fully covered by tau envelopes”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    MAP4 does not form envelopes on either taxol-lattice or GMPCPP-lattice microtubules, but binds uniformly along the microtubule length.

    “Conversely, we did not observe envelope formation on either lattice with MAP4, but rather uniform binding along the microtubule length”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    In the presence of 10 μM taxol after flow, tau envelopes disassembled from the ends and from the location of the mechanically induced fissure, with tau density dropping to 3.6 ± 2.8%.

    “After the hydrodynamic flow, in the presence of 10 μM taxol in solution, the envelopes disassembled from the ends. Additionally, the envelope started disassembling from the location where the fissure had been introduced by mechanical bending (Fig. 2a, Supplementary Movie 5) as evidenced by a drop in tau density to 3.6 ± 2.8% (Fig. 2a,b; mean ± s.d.).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Tau envelope formation is a cooperative process, with a Hill coefficient of 1.9 ± 0.7.

    “revealing that tau envelope formation is a cooperative process (Fig. 1b) with a Hill coefficient of 1.9 ± 0.7.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    At 600 nM tau, tau uniformly covers microtubules and envelopes cannot be distinguished by local changes in tau density.

    “At this concentration, tau uniformly covers the microtubule and the envelopes cannot be distinguished by local changes in tau density.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    On GMPCPP-lattice microtubules at 600 nM tau, kinesin-1 moved along entire lengths, indicating tau did not form envelopes even at saturating tau concentrations.

    “By contrast, on the GMPCPP-lattice microtubules, kinesin-1 moved along their entire lengths, revealing that tau did not form envelopes, even at saturating tau concentrations.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Single MAP4 molecules diffused on the microtubule lattice outside of tau/MAP2c envelopes but were unable to diffuse into the envelopes.

    “while single MAP4 molecules diffused on the microtubule lattice outside of tau/MAP2c envelopes, they were unable to diffuse into the tau/MAP2c envelopes”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    After addition of 400 nM tau to speckled taxol-lattice microtubules, envelopes formed rapidly and distances between individual speckles decreased, indicating lattice compaction concomitant with cooperative tau binding.

    “After the addition of 400 nM tau to speckled taxol-lattice microtubules, envelopes formed rapidly and we observed a decrease in the distances between the individual speckles, indicating that the microtubule lattice was compacting concomitantly with the cooperative binding of tau”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    In the absence of taxol, the fissure closed when the microtubule relaxed, with tau density recovering to 77.3 ± 10.8%.

    “In the absence of taxol, the fissure closed when the microtubule relaxed, with the tau density recovering to 77.3 ± 10.8% (Fig. 2a,b, Supplementary Movie 6; mean ± s.d.).”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    At higher concentrations, MAP2c and MAP4 strongly decreased the number of processive KIF1A motors without changing the velocity of motors that were able to bind.

    “However, at higher concentrations these MAPs strongly decreased the number of processive motors without changing the velocity of motors that were able to bind”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Average pixel intensities of KIF1A were negatively correlated with average intensities of MAP2c at both concentrations tested, whereas no negative correlation was observed between KIF1A and MAP4.

    “The average pixel intensities of KIF1A were negatively correlated with the average intensities of MAP2c at both concentrations tested, whereas we did not observe a negative correlation between KIF1A and MAP4”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    At the highest concentrations of MAPs tested, MAP4, but not MAP2c, decreased the number of processive dynein motors on the microtubule.

    “We found that at the highest concentrations of MAPs tested, MAP4, but not MAP2c, decreased the number of processive dynein motors on the microtubule”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Without substantial changes in initial tau density, fissures in the tau signal appeared and increased in size over time.

    “Without substantial changes in the initial tau density on the microtubule, fissures in the tau signal appeared, which increased in size over time.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Findingown data

    Tau remained on microtubules when only DMSO was added, and the coefficient of variation remained largely unchanged.

    “Tau remained on the microtubules when only DMSO was added to the medium, and the coefficient of variation remained largely unchanged”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    For tau, cryo-EM showed a bimodal distribution of lattice spacing, suggesting the lattice was not covered entirely in tau envelopes under the conditions.

    “For tau, we observed a bimodal distribution of lattice spacing, suggesting that the lattice was not covered entirely in tau envelopes under our conditions.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationown data

    Tau envelope formation is tightly linked to microtubule mechanics, and physically extending microtubule lattices coated by tau envelopes induces envelope disassembly.

    “Combined, these experiments establish that tau envelope formation is tightly linked to microtubule mechanics, and show that physically extending microtubule lattices coated by tau envelopes induces envelope disassembly”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationreasoning

    Because MAP4 does not form envelopes, it is unable to provide spatially distinct regulation of motors and rather regulates them globally.

    “Because MAP4 does not form envelopes, it is unable to provide spatially distinct regulation of motors and rather regulates them globally.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductown data

    The sequence of the amplified MAP4 gene corresponds to the RefSeq NM_002375.5, as confirmed with Sanger sequencing.

    “We confirmed that the sequence of the amplified gene corresponds to the RefSeq NM_002375.5 with Sanger sequencing.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationown data

    Compacted microtubule lattices induce cooperative binding of tau, and extending microtubule lattices induces disassembly of tau envelopes in vitro.

    “Our results show that compacted microtubule lattices induce cooperative binding of tau, and that extending microtubule lattices induces disassembly of tau envelopes in vitro.”
    Quote in the paperSubstantial claim
  • May combine two claims. The quote only partly states this claim.

    Study design and conductown data

    Staining for α-tubulin or co-transfecting with mScarlet-α-tubulin verified that microtubules were not disrupted by either treatment.

    “Staining the cells for α-tubulin, or co-transfecting the cells with eGFP-tau and mScarlet-α-tubulin, verified that microtubules were not disrupted by either treatment”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    Colocalization of tau and MAP2 into shared envelopes that exclude MAP4 suggests that different MAPs can form spatially distinct domains on the microtubule lattice, differentially regulating access to the microtubule surface.

    “Colocalization of tau and MAP2 into shared envelopes that exclude MAP4 suggests that different MAPs can form spatially distinct domains on the microtubule lattice, differentially regulating access to microtubule surface.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    Tau and MAP2, but not MAP4, are sensitive to the mechanical state of the microtubule lattice, and thus are suited to function as mechanosensitive MAPs.

    “Our data suggests that tau and MAP2, but not MAP4, are sensitive to the mechanical state of the microtubule lattice, and thus are suited to function as mechanosensitive MAPs.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductnone given

    The trap stiffness was calibrated using force calibration (0.5.1) in Bluelake (v1.6.11, LUMICKS B.V.) under zero flow condition.

    “The trap stiffness was calibrated using force calibration (0.5.1) in Bluelake (v1.6.11, LUMICKS B.V.) under zero flow condition.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductnone given

    Data points from two different protein preparations of mScarlet-tau envelopes were pooled.

    “Data points from two different protein preparations of mScarlet–tau envelopes were pooled.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationown data

    Like tau, MAP2c forms envelopes that compact an extended microtubule lattice; MAP4 does not form cohesive envelopes in any condition tested and is unable to affect the structure of the lattice.

    “Combined, these data reveal that like tau, MAP2c forms envelopes, which compact an extended microtubule lattice. By contrast, MAP4 does not form cohesive envelopes in any condition tested, and is unable to affect the structure of the lattice”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    Tau/MAP2c envelopes exclude MAP4 at their boundaries and restrict the dynamics of MAP4 within.

    “demonstrating that tau/MAP2c envelopes exclude MAP4 at their boundaries and restrict the dynamics of MAP4 within.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    The vast majority of tau in U-2 OS cells was cooperatively bound to microtubules, and artificial lattice extension by taxol reveals this cooperative binding through envelope dissolution.

    “We thus conclude that the vast majority of tau in U-2 OS cells was cooperatively bound to microtubules, and that artificial lattice extension by taxol reveals this cooperative binding through envelope dissolution.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    There was no observable negative correlation between averaged intensities of MAPs and DDH, suggesting neither MAP strongly affects the spatial distribution of the motors along microtubules.

    “We found no observable negative correlation (Fig. 5d), suggesting that neither MAP strongly affects the spatial distribution of the motors along microtubules.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationown data

    MAP2c and MAP4 exert different effects on retrograde and anterograde motors, with MAP envelopes differentially regulating dynein-based retrograde and kinesin-based anterograde transport.

    “These results indicate that cooperative envelope formation facilitates spatial regulation of the KIF1A motor along the microtubule, and demonstrate that MAP2c and MAP4 exert different effects on retrograde and anterograde motors.”
    • Also stated in: § Discussion · boosted
      “We demonstrate that MAP envelopes differentially regulate the motility of two predominant microtubule motor systems: dynein-based retrograde, and kinesin-based anterograde transport.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationown data

    Both MAP2c and MAP4 strongly affect the landing rate of KIF1A motors.

    “These observations indicate that both MAPs strongly affect the landing rate of the KIF1A motors.”
    Quote in the paperSubstantial claim
  • May combine two claims.

    Interpretationreasoning

    Cooperative binding of tau and MAP2c to microtubules both requires and reciprocally induces a local compaction of the underlying microtubule lattice.

    “Cooperative binding of tau and MAP2c to microtubules both requires and, reciprocally, induces a local compaction of the underlying microtubule lattice.”
    Quote in the paperSubstantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductnone given

    All experiments were quantified by pooling data from at least two chambers performed on multiple days.

    “All experiments were quantified by pooling data from at least two chambers performed on multiple days.”
    Quote in the paperNot a substantial claim
  • Probably not a substantial claim: may not pass S3 (load-bearing).

    Study design and conductnone given

    The sequence of the resulting pcDNA4.0/TO_EGFP-tau plasmid was checked using Sanger sequencing.

    “The sequence of the resulting pcDNA4.0/TO_EGFP-tau plasmid was checked using Sanger sequencing.”
    Quote in the paperNot a substantial claim
  • May combine two claims.

    Interpretationown data

    Tau and MAP2 envelopes spatially gate kinesin access to the microtubule, while allowing dynein to pass.

    “Our data reveal that tau and MAP2 envelopes spatially gate kinesin access to the microtubule, while allowing dynein to pass.”
    Quote in the paperSubstantial claim
58 of 58
  • The authors state this as an assumption.

    The majority of tubulin incorporated into microtubules in vivo, and the predominant volume of the microtubule lattice in cells, is in the compacted GDP state.

    “Since the majority of tubulin incorporated to microtubules in vivo is thought to be in the compacted GDP-state”
    “It is presumed that the predominant volume of the microtubule lattice in cells is in the GDP compacted state”
1 of 1

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Phosphorylation likely also regulates tau-induced lattice compaction, misregulation of which could have downstream effects on microtubule stability and interactions with other MAPs and motor proteins.

    “Phosphorylation likely also regulates tau-induced lattice compaction (Siahaan et al., 2022), in which misregulation of this process could have downstream effects on microtubule stability, as well as interactions with other MAPs and motor proteins.”

    From Tau hyperphosphorylation impairs cooperative binding to microtubules and perturbs organelle trafficking in neurons (2026) · cites this paper as Siahaan et al., 2022

    The Results section, “Tau cooperativity by local microtubule lattice compaction” (page unavailable), reports that lattice regions covered by tau envelopes compacted. Our copy does not establish that phosphorylation regulates this tau-induced compaction; a search for phosphorylation found no passage addressing that link. The proposed downstream effects are the citing authors’ inference, not the part directly attributed to this source. (LLM, conf=0.83)

    Experimental — accuracy not yet measured
  • The proline-rich region and C-terminal pseudo-repeat domain of tau regulate its cooperative interactions with microtubules.

    “the proline-rich region and C-terminal pseudo-repeat domain of tau regulate its cooperative interactions with microtubules”

    From Tau hyperphosphorylation impairs cooperative binding to microtubules and perturbs organelle trafficking in neurons (2026) · cites this paper as Siahaan et al., 2022

    The Discussion (page unavailable) says regions flanking tau’s microtubule-binding repeats are required for envelope formation and might mediate interactions between tau molecules. It does not identify the proline-rich region and C-terminal pseudo-repeat domain specifically, so the claim’s domain-level attribution is not established by our copy. (LLM, conf=0.83)

    Experimental — accuracy not yet measured
  • Proteins serving as 'conformational code readers' can become 'code writers' at a high concentration, an important feature of microtubule lattice plasticity.

    “An important feature of microtubule lattice plasticity, in contrast to biochemical modifications, is that proteins serving as 'conformational code readers' can become 'code writers' at a high concentration 73 .”
  • Discontinuous patterning of tau along microtubules, consistent with envelopes, was observed in live non-neuronal U-2 OS cells following taxol treatment or elevated pH, and by immunofluorescence in fixed hippocampal neurons.

    “Discontinuous patterning of tau along microtubules, consistent with envelopes, was also observed in live, non-neuronal U-2 OS cells following taxol treatment (Siahaan et al., 2022) or with elevated pH (Siahaan et al., 2026), and by immunofluorescence staining in fixed hippocampal neurons (Tan et al., 2019).”

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

Each contradiction between two passages listed here was confirmed by an independent check.

  • Flow assay says tau was removed but describes adding tau

    Minor

    The Results state that tau was removed during the hydrodynamic-flow assay and replaced with buffer. The corresponding Methods instead say that tau was introduced into the chamber, leaving the solution condition during envelope disassembly inconsistent.

1 of 1

Cites

Flagged first, then by citations

Cited by

Sorted by citations

Authors
Siahaan, V., Tan, R., Humhalova, T., Libusova, L., Lacey, S. E., Tan, T., Dacy, M., Ori-McKenney, K. M., McKenney, R. J., Braun, M., & Lansky, Z.
Affiliations
  • Czech Academy of Sciences (CZ)
  • University of California, Davis (US)
  • MRC Laboratory of Molecular Biology (GB)
Corresponding author
  • Ori-McKenney, Kassandra M.
  • McKenney, Richard J.
  • Braun, Marcus
Venue
Nature Chemical Biology
Published
2022-08-22
Volume
18
Issue
11
Pages
1224-1235
ISSN
  • 1552-4450 (ISSN-L)
  • 1552-4469
OpenAlex
W4292641506
Cited by
94
References
93
Citations by year
2026: 32 · 2025: 23 · 2024: 14 · 2023: 23 · 2022: 2
FWCI
8.28
Type
journal article
Language
en
Open access
Locations
  • Nature Chemical Biology (publishedVersion)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
  • PubMed (publishedVersion)
  • PubMed Central (acceptedVersion)
  • eScholarship (California Digital Library) (submittedVersion)
Funders
  • Univerzita Karlova v Praze (CZ.02.2.69/0.0/0.0/19\_073/0016935, 02.2.69/0.0/0.0/19_073/0016935, CZ.02.1.01/0.0/0.0/16_013/0001775, 86652036)
  • Grantová Agentura, Univerzita Karlova (CZ.02.1.01/0.0/0.0/16_013/0001775, CZ.02.2.69/0.0/0.0/19_073/0016935)
  • Ministerstvo Školství, Mládeže a Tělovýchovy (CZ.02.1.01/ 0.0/0.0/16 013/0001775, LM2018129, CZ.02., CZ.02.2.69/0.0/0.0/19 073/0016935, CZ.02.1.01, LM2015043, CZ.02.1.01/0.0, 86652036)
  • Grantová Agentura České Republiky (CZ.02.1.01/0.0, 86652036, CZ.02.1.01, CZ.02.2.69/0.0/0.0/19 073/0016935, GX19-27477X, CZ.02.1.01/0.0/0.0/16_013/0001775, LM2018129, LM2015043, GA20-04068S, /19_073/0016935)
  • European Regional Development Fund (02.1.01/0.0/0.0, CZ.02.2.69/0.0/0.0/19_073/0016935, CZ.02, CZ.02.1.01, CZ.02.1.01/0.0, /16_013/0001775, LM2018129, CZ.02.1.01/0.0/0.0, CZ.02.1.01/0.0/0.0/16_013/0001775, 86652036)
  • National Institute of General Medical Sciences (R35GM124889, R35GM133688)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Microtubule and mitosis dynamics
  • Health Sciences › Medicine › Physiology › Alzheimer's disease research and treatments
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
Keywords
tau protein, microtubule-associated proteins, MAP2, MAP4, intrinsically disordered proteins, tubulin dimers, allosteric regulation, neurodegeneration
MeSH terms
Humans, Microtubule-Associated Proteins, Microtubules, Proteins, Tubulin, tau Proteins, Neurodegenerative Diseases

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Claims read by deepseek-v4.1-flash under definition version 3 (extract-v3) on 2026-11-02.

Classified by jev-1.13-20260917 (gold-guideline-v0.2) on 2026-11-02.

Cited sources are checked by gpt-6-sol.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review