MicroRNA-mediated mRNA translation activation in quiescent cells and oocytes involves recruitment of a nuclear microRNP
Open accessAbstract
MicroRNAs can promote translation of specific mRNAs in quiescent (G0) mammalian cells and immature Xenopus laevis oocytes. We report that microRNA-mediated upregulation of target mRNAs in oocytes is dependent on nuclear entry of the microRNA; cytoplasmically-injected microRNA repress target mRNAs. Components of the activation microRNP, AGO, FXR1 (FXR1-iso-a) and miR16 are present in the nucleus and cytoplasm. Importantly, microRNA target mRNAs for upregulation, Myt1, TNFα and a reporter bearing the TNFα AU-rich, microRNA target sequence, are associated with AGO in immature oocyte nuclei and AGO2 in G0 human nuclei, respectively. mRNAs that are repressed or lack target sites are not associated with nuclear AGO. Crosslinking-coupled immunopurification revealed greater association of AGO2 with FXR1 in the nucleus compared to cytoplasm. Consistently, overexpression of FXR1-iso-a rescues activation of cytoplasmically-injected RNAs and in low density, proliferating cells. These data indicate the importance of a compartmentalized AGO2-FXR1-iso-a complex for selective recruitment for microRNA-mediated upregulation.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
miRNA-mediated activation of translation involves AGO2 and FXR1 instead of GW182.
“The miRNA-mediated activation of translation involves AGO2 and FXR1 instead of GW182 (56).”
From Overview of MicroRNA Biogenesis, Mechanisms of Actions, and Circulation (2018) · cites this paper as [56]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
MicroRNAs: Target Recognition and Regulatory Functions
Bartel, D. P. (2009) · Cell · doi:10.1016/j.cell.2009.01.002 · Cited by 20,068 · see citing works
Origins and Mechanisms of miRNAs and siRNAs
Carthew, R. W., & Sontheimer, E. J. (2009) · Cell · doi:10.1016/j.cell.2009.01.035 · Cited by 5,023 · see citing works
Switching from Repression to Activation: MicroRNAs Can Up-Regulate Translation
Vasudevan, S., Tong, Y., & STEITZ, J. A. (2007) · Science · doi:10.1126/science.1149460 · Cited by 2,806 · see citing works
A brain-specific microRNA regulates dendritic spine development
Schratt, G. M., Tuebing, F., Nigh, E. A., Kane, C. G., Sabatini, M. E., Kiebler, M., & Greenberg, M. E. (2006) · Nature · doi:10.1038/nature04367 · Cited by 1,786 · see citing works
A Restriction Point for Control of Normal Animal Cell Proliferation
Pardee, A. B. (1974) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.71.4.1286 · Cited by 1,416 · see citing works
MicroRNA-10a binds the 5’UTR of ribosomal protein mRNAs and enhances their translation
Ørom, U. A., Nielsen, F. C., & Lund, A. H. (2008) · Molecular Cell · doi:10.1016/j.molcel.2008.05.001 · Cited by 1,384 · see citing works
Relief of microRNA-Mediated Translational Repression in Human Cells Subjected to Stress
Bhattacharyya, S. N., Habermacher, R., Martiné, U., Closs, E. I., & Filipowicz, W. (2006) · Cell · doi:10.1016/j.cell.2006.04.031 · Cited by 1,332 · see citing works
Behm‐Ansmant, I., Rehwinkel, J., Doerks, T., Stark, A., Bork, P., & Izaurralde, E. (2006) · Genes & Development · doi:10.1101/gad.1424106 · Cited by 1,030 · see citing works
RNA-Binding Protein Dnd1 Inhibits MicroRNA Access to Target mRNA
Kedde, M., Strasser, M. J., Boldajipour, B. A., Vrielink, J. A. F. O., Slanchev, K., le Sage, C., Nagel, R., Voorhoeve, P. M., van Duijse, J., Ørom, U. A., et al. (2007) · Cell · doi:10.1016/j.cell.2007.11.034 · Cited by 733 · see citing works
A Hexanucleotide Element Directs MicroRNA Nuclear Import
Hwang, H., Wentzel, E. A., & Mendell, J. T. (2007) · Science · doi:10.1126/science.1136235 · Cited by 698 · see citing works
A role for the P-body component GW182 in microRNA function
Liu, J., Rivas, F. V., Wohlschlegel, J. A., Yates, J. R., Parker, R., & Hannon, G. J. (2005) · Nature Cell Biology · doi:10.1038/ncb1333 · Cited by 680 · see citing works
microRNA‐122 stimulates translation of hepatitis C virus RNA
Henke, J. I., Goergen, D., Zheng, J., Song, Y., Schüttler, C. G., Fehr, C., Jünemann, C., & Niepmann, M. (2008) · The EMBO Journal · doi:10.1038/emboj.2008.244 · Cited by 677 · see citing works
AU-rich-element-mediated upregulation of translation by FXR1 and Argonaute 2
Vasudevan, S., & Steitz, J. A. (2007) · Cell · doi:10.1016/j.cell.2007.01.038 · Cited by 656 · see citing works
Self-citationA New Description of Cellular Quiescence
Coller, H. A., Sang, L., & Roberts, J. M. (2006) · PLoS Biology · doi:10.1371/journal.pbio.0040083 · Cited by 548 · see citing works
Posttranscriptional Upregulation by MicroRNAs
Vasudevan, S. (2011) · Wiley Interdisciplinary Reviews - RNA · doi:10.1002/wrna.121 · Cited by 512 · see citing works
Fragile X-related protein and VIG associate with the RNA interference machinery
Caudy, A. A., Myers, M., Hannon, G. J., & Hammond, S. M. (2002) · Genes & Development · doi:10.1101/gad.1025202 · Cited by 499 · see citing works
A <i>Drosophila</i> fragile X protein interacts with components of RNAi and ribosomal proteins
Ishizuka, A., Siomi, M. C., & Siomi, H. (2002) · Genes & Development · doi:10.1101/gad.1022002 · Cited by 486 · see citing works
miR-16 family induces cell cycle arrest by regulating multiple cell cycle genes
Liu, Q., Fu, H., Sun, F., Zhang, H., Tie, Y., Zhu, J., Xing, R., Sun, Z., & Zheng, X. (2008) · Nucleic Acids Research · doi:10.1093/nar/gkn522 · Cited by 477 · see citing works
Maintenance of muscle stem-cell quiescence by microRNA-489
Cheung, T. H., Quach, N. L., Charville, G. W., Liu, L., Park, L., Edalati, A., Yoo, B., Hoang, P., & Rando, T. A. (2012) · Nature · doi:10.1038/nature10834 · Cited by 461 · see citing works
Reversible cross-linking combined with immunoprecipitation to study RNA–protein interactions in vivo
Niranjanakumari, S. (2002) · Methods · doi:10.1016/s1046-2023(02)00021-x · Cited by 410 · see citing works
Eberhart, D. (1996) · Human Molecular Genetics · doi:10.1093/hmg/5.8.1083 · Cited by 390 · see citing works
Mammalian miRNA RISC Recruits CAF1 and PABP to Affect PABP-Dependent Deadenylation
Fabian, M. R., Mathonnet, G., Sundermeier, T. R., Mathys, H., Zipprich, J. T., Svitkin, Y. V., Rivas, F. V., Jínek, M., Wohlschlegel, J. A., Doudna, J. A., et al. (2009) · Molecular Cell · doi:10.1016/j.molcel.2009.08.004 · Cited by 388 · see citing works
Importin 8 Is a Gene Silencing Factor that Targets Argonaute Proteins to Distinct mRNAs
Weinmann, L., Höck, J., Ivacevic, T., Ohrt, T., Mütze, J., Schwille, P., Kremmer, E., Beneš, V., Urlaub, H., & Meister, G. (2009) · Cell · doi:10.1016/j.cell.2008.12.023 · Cited by 365 · see citing works
Chekulaeva, M., Mathys, H., Zipprich, J. T., Attig, J., Čolić, M., Parker, R., & Filipowicz, W. (2011) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.2166 · Cited by 353 · see citing works
An Argonaute Transports siRNAs from the Cytoplasm to the Nucleus
Guang, S., Bochner, A. F., Pavelec, D. M., Burkhart, K. B., Harding, S. J., Lachowiec, J., & Kennedy, S. G. (2008) · Science · doi:10.1126/science.1157647 · Cited by 351 · see citing works
Control of alternative splicing through siRNA-mediated transcriptional gene silencing
Alló, M., Buggiano, V., Fededa, J. P., Petrillo, E., Schor, I., de la Mata, M., Agirre, E., Plass, M., Eyras, E., Elela, S. A., et al. (2009) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.1620 · Cited by 340 · see citing works
Liao, J., Ma, L., Guo, Y.-H., Zhang, Y., Zhou, H., Shao, P., Chen, Y., & Qu, L. (2010) · PLoS ONE · doi:10.1371/journal.pone.0010563 · Cited by 305 · see citing works
Till, S., Lejeune, E., Thermann, R., Bortfeld‐Miller, M., Hothorn, M., Enderle, D., Heinrich, C., Hentze, M. W., & Ladurner, A. G. (2007) · Nature Structural & Molecular Biology · doi:10.1038/nsmb1302 · Cited by 242 · see citing works
MicroRNA Activity Is Suppressed in Mouse Oocytes
Ma, J., Flemr, M., Stein, P., Berninger, P., Malı́k, R., Zavolan, M., Svoboda, P., & Schultz, R. M. (2010) · Current Biology · doi:10.1016/j.cub.2009.12.042 · Cited by 241 · see citing works
Autoregulation of microRNA biogenesis by let-7 and Argonaute
Zisoulis, D. G., Kai, Z. S., Chang, R., & Pasquinelli, A. E. (2012) · Nature · doi:10.1038/nature11134 · Cited by 219 · see citing works
Roberts, A. P. E., Lewis, A., & Jopling, C. L. (2011) · Nucleic Acids Research · doi:10.1093/nar/gkr426 · Cited by 216 · see citing works
Yang, Z., Jakymiw, A., Wood, M. R., Eystathioy, T., Rubin, R. L., Fritzler, M. J., & Chan, E. K. L. (2004) · Journal of Cell Science · doi:10.1242/jcs.01477 · Cited by 208 · see citing works
Ge-1 is a central component of the mammalian cytoplasmic mRNA processing body
YU, J. H., Yang, W.-H., Gulick, T., Bloch, K. D., & Bloch, D. B. (2005) · RNA · doi:10.1261/rna.2142405 · Cited by 199 · see citing works
Translational control by cytoplasmic polyadenylation in Xenopus oocytes
Radford, H. E., Meijer, H. A., & de Moor, C. H. (2008) · Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms · doi:10.1016/j.bbagrm.2008.02.002 · Cited by 191 · see citing works
Ohrt, T., Mütze, J., Staroske, W., Weinmann, L., Höck, J., Crell, K., Meister, G., & Schwille, P. (2008) · Nucleic Acids Research · doi:10.1093/nar/gkn693 · Cited by 190 · see citing works
Cell cycle control of microRNA-mediated translation regulation
Vasudevan, S., Tong, Y., & STEITZ, J. A. (2008) · Cell Cycle · doi:10.4161/cc.7.11.6018 · Cited by 187 · see citing works
MicroRNAs with a nucleolar location
Politz, J. C. R., Hogan, E. M., & Pederson, T. (2009) · RNA · doi:10.1261/rna.1470409 · Cited by 183 · see citing works
P-Body Loss Is Concomitant with Formation of a Messenger RNA Storage Domain in Mouse Oocytes1
Flemr, M., Ma, J., Schultz, R. M., & Svoboda, P. (2010) · Biology of Reproduction · doi:10.1095/biolreprod.109.082057 · Cited by 150 · see citing works
Cell–cell contact globally activates microRNA biogenesis
Hwang, H., Wentzel, E. A., & Mendell, J. T. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0811523106 · Cited by 142 · see citing works
Tserel, L., Runnel, T., Kisand, K., Pihlap, M., Bakhoff, L., Kolde, R., Peterson, H., Vilo, J., Peterson, P., & Rebane, A. (2011) · Journal of Biological Chemistry · doi:10.1074/jbc.m110.213561 · Cited by 136 · see citing works
The nuclear nurture and cytoplasmic nature of localized mRNPs
Giorgi, C., & Moore, M. J. (2007) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2007.01.002 · Cited by 133 · see citing works
Ding, X. C., & Großhans, H. (2009) · The EMBO Journal · doi:10.1038/emboj.2008.275 · Cited by 131 · see citing works
Expanded RNA-binding activities of mammalian Argonaute 2
Tan, G. S., Garchow, B. G., Liu, X., Yeung, J., Morris, J. P., Cuellar, T. L., McManus, M. T., & Kiriakidou, M. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp812 · Cited by 127 · see citing works
Lin, C.-C., Liu, L.-Z., Addison, J., Wonderlin, W. F., Ivanov, A. V., & Ruppert, J. M. (2011) · Molecular and Cellular Biology · doi:10.1128/mcb.01189-10 · Cited by 126 · see citing works
Mortensen, R. D., Serra, M., STEITZ, J. A., & Vasudevan, S. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1105401108 · Cited by 124 · see citing works
Nuclear RNP complex assembly initiates cytoplasmic RNA localization
Kress, T. L., Yoon, Y. J., & Mowry, K. L. (2004) · The Journal of Cell Biology · doi:10.1083/jcb.200309145 · Cited by 120 · see citing works
Nelson, P. T., Planell-Saguer, M. D., Lamprinaki, S., Kiriakidou, M., Zhang, P. J., O’Doherty, U., & Mourelatos, Z. (2007) · RNA · doi:10.1261/rna.646007 · Cited by 115 · see citing works
CRM1 mediates nuclear-cytoplasmic shuttling of mature microRNAs
Castanotto, D., Lingeman, R. G., Riggs, A. D., & Rossi, J. J. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0912384106 · Cited by 114 · see citing works
Tamanini, F., Bontekoe, C. J. M., Bakker, C. E., van Unen, L., Anar, B., Willemsen, R., Yoshida, M., GALJAARD, H., Oostra, B. A., & Hoogeveen, A. T. (1999) · Human Molecular Genetics · doi:10.1093/hmg/8.5.863 · Cited by 112 · see citing works
Fragile X Mental Retardation Protein FMRP Binds mRNAs in the Nucleus
Kim, M., Bellini, M., & Ceman, S. (2008) · Molecular and Cellular Biology · doi:10.1128/mcb.01377-08 · Cited by 98 · see citing works
Lund, E., Sheets, M. D., Imboden, S. B., & Dahlberg, J. E. (2011) · Genes & Development · doi:10.1101/gad.2038811 · Cited by 84 · see citing works
Analysis of Domains Affecting Intracellular Localization of the FMRP Protein
Bardoni, B., Sittler, A., Shen, Y., & Mandel, J. (1997) · Neurobiology of Disease · doi:10.1006/nbdi.1997.0142 · Cited by 80 · see citing works
Bravo, R., Otero, C., Allende, C. C., & Allende, J. E. (1978) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.75.3.1242 · Cited by 78 · see citing works
Argonaute-mediated translational repression (and activation)
Iwasaki, S., & Tomari, Y. (2009) · Fly · doi:10.4161/fly.3.3.9025 · Cited by 72 · see citing works
The nuclear experience of CPEB: Implications for RNA processing and translational control
Lin, C., Evans, V., Shen, S., Xing, Y., & Richter, J. D. (2009) · RNA · doi:10.1261/rna.1779810 · Cited by 65 · see citing works
Dubé, M., Huot, M., & Khandjian, É. W. (2000) · BMC Genetics · doi:10.1186/1471-2156-1-4 · Cited by 55 · see citing works
Rio, D. C. (2010) · Cited by 43 · see citing works
Fehr, C., Conrad, K. D., & Niepmann, M. (2012) · Cell Cycle · doi:10.4161/cc.11.2.18699 · Cited by 38 · see citing works
Expression of cell-cycle regulators during Xenopus oogenesis
Furuno, N., Kawasaki, A., & Sagata, N. (2003) · Gene Expression Patterns · doi:10.1016/s1567-133x(03)00037-1 · Cited by 21 · see citing works
Pre-mRNA Splicing in the Nuclei of Xenopus Oocytes
Moon, K. H., Zhao, X., & Yu, Y. (2006) · Methods in molecular biology · doi:10.1007/978-1-59745-000-3_11 · Cited by 11 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Overview of MicroRNA Biogenesis, Mechanisms of Actions, and Circulation
O'Brien, J., Hayder, H., Zayed, Y., & Peng, C. (2018) · Frontiers in Endocrinology · doi:10.3389/fendo.2018.00402 · Cited by 5,287 · see citing works
Orang, A., Safaralizadeh, R., & Kazemzadeh, M. (2014) · International Journal of Genomics · doi:10.1155/2014/970607 · Cited by 644 · see citing works
Role of microRNAs in translation regulation and cancer
Oliveto, S., Mancino, M., Manfrini, N., & Biffo, S. (2017) · World Journal of Biological Chemistry · doi:10.4331/wjbc.v8.i1.45 · Cited by 429 · see citing works
Circulating miRNAs: cell–cell communication function?
Turchinovich, A. A., Samatov, T. R., Tonevitsky, A., & Burwinkel, B. (2013) · Frontiers in Genetics · doi:10.3389/fgene.2013.00119 · Cited by 370 · see citing works
Genome-wide CRISPR screen identifies host dependency factors for influenza A virus infection
Li, B., Clohisey, S., Chia, B. S., Wang, B., Cui, A., Eisenhaure, T., Schweitzer, L. D., Hoover, P., Parkinson, N., Nachshon, A., et al. (2020) · Nature Communications · doi:10.1038/s41467-019-13965-x · Cited by 232 · see citing works
Cao, D., Li, L., & Chan, W. (2016) · International Journal of Molecular Sciences · doi:10.3390/ijms17060842 · Cited by 203 · see citing works
MiRNAs: Biology, Biogenesis, their Web-based Tools, and Databases
Tafrihi, M., & Hasheminasabgorji, E. (2018) · MicroRNA · doi:10.2174/2211536607666180827111633 · Cited by 196 · see citing works
RNA Dysregulation in Amyotrophic Lateral Sclerosis
Butti, Z., & Patten, S. A. (2019) · Frontiers in Genetics · doi:10.3389/fgene.2018.00712 · Cited by 195 · see citing works
The Role of microRNAs in Inflammation
Das, K., & Rao, L. V. M. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms232415479 · Cited by 177 · see citing works
Ge, Z., Schatten, H., Zhang, C.-L., & Sun, Q.-Y. (2014) · Reproduction · doi:10.1530/rep-14-0242 · Cited by 177 · see citing works
Circulating microRNAs as biomarkers in cancer diagnosis
Sohel, M. M. H. (2020) · Life Sciences · doi:10.1016/j.lfs.2020.117473 · Cited by 166 · see citing works
Deregulated mitochondrial microRNAs in Alzheimer's disease: Focus on synapse and mitochondria
Gowda, P., Reddy, P. H., & Kumar, S. (2021) · Ageing Research Reviews · doi:10.1016/j.arr.2021.101529 · Cited by 166 · see citing works
MicroRNAs: crucial regulators of placental development
Hayder, H., O’Brien, J. A., Nadeem, U., & Peng, C. (2018) · Reproduction · doi:10.1530/rep-17-0603 · Cited by 157 · see citing works
MicroRNA miR-324-3p induces promoter-mediated expression of RelA gene
Dharap, A., Pokrzywa, C., Murali, S., Pandi, G., & Vemuganti, R. (2013) · PLoS ONE · doi:10.1371/journal.pone.0079467 · Cited by 154 · see citing works
Momin, M. Y., Gaddam, R. R., Kravitz, M., Gupta, A., & Vikram, A. (2021) · Cells · doi:10.3390/cells10113097 · Cited by 107 · see citing works
A Specialized Mechanism of Translation Mediated by FXR1a-Associated MicroRNP in Cellular Quiescence
Bukhari, S. I. A., Truesdell, S. S., Lee, S., Kollu, S., Classon, A., Boukhali, M., Jain, E., Mortensen, R. D., Yanagiya, A., Sadreyev, R. I., et al. (2016) · Molecular Cell · doi:10.1016/j.molcel.2016.02.013 · Cited by 106 · see citing works
MicroRNA-276 promotes egg-hatching synchrony by up-regulating brm in locusts
He, J., Chen, Q., Wei, Y., Jiang, F., Yang, M., Hao, S., Guo, X., Chen, D., & Kang, L. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1521098113 · Cited by 105 · see citing works
MicroRNA Expression during Bovine Oocyte Maturation and Fertilization
Gilchrist, G., Tscherner, A. K., Nalpathamkalam, T., Merico, D., & LaMarre, J. (2016) · International Journal of Molecular Sciences · doi:10.3390/ijms17030396 · Cited by 99 · see citing works
Tuning LeSPL-CNR expression by SlymiR157 affects tomato fruit ripening
Chen, W., Kong, J., Lai, T., Manning, K. C., Wu, C., Wang, Y., Cheng, Q., Li, B., Yu, Z., Zhang, X., et al. (2015) · Scientific Reports · doi:10.1038/srep07852 · Cited by 95 · see citing works
Sacco, L. D., & Masotti, A. (2012) · International Journal of Molecular Sciences · doi:10.3390/ijms14010480 · Cited by 96 · see citing works
Elkhouly, A. M., Youness, R. A., & Gad, M. Z. (2020) · Non-coding RNA Research · doi:10.1016/j.ncrna.2020.01.001 · Cited by 87 · see citing works
MiR-155 Regulates PAD4-Dependent Formation of Neutrophil Extracellular Traps
Hawez, A., Al-Haidari, A. A., Madhi, R., Rahman, M., & Thorlacius, H. (2019) · Frontiers in Immunology · doi:10.3389/fimmu.2019.02462 · Cited by 81 · see citing works
Single Molecule Fluorescence Approaches Shed Light on Intracellular RNAs
Pitchiaya, S., Heinicke, L. A., Custer, T. C., & Walter, N. G. (2014) · Chemical Reviews · doi:10.1021/cr400496q · Cited by 80 · see citing works
Non-coding RNAs as potential therapeutic targets in breast cancer
Tomar, D., Yadav, A. S., Kumar, D., Bhadauriya, G., & Kundu, G. C. (2019) · Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms · doi:10.1016/j.bbagrm.2019.04.005 · Cited by 81 · see citing works
Epigenetic effects of short-chain fatty acids from the large intestine on host cells
Stein, R. A., & Riber, L. (2023) · microLife · doi:10.1093/femsml/uqad032 · Cited by 81 · see citing works
Al-Haidari, A. A., Algaber, A. A., Madhi, R., Syk, I., & Thorlacius, H. (2018) · Cancer Letters · doi:10.1016/j.canlet.2018.02.026 · Cited by 77 · see citing works
Guo, J., Lv, J., Liu, M., & Tang, H. (2015) · Journal of Biological Chemistry · doi:10.1074/jbc.m115.691857 · Cited by 76 · see citing works
MicroRNAs and Xenobiotic Toxicity: An Overview
Balasubramanian, S., Gunasekaran, K., Sasidharan, S., Mathan, V. J., & Perumal, E. (2020) · Toxicology Reports · doi:10.1016/j.toxrep.2020.04.010 · Cited by 72 · see citing works
AGO2 and its partners: a silencing complex, a chromatin modulator, and new features
Li, X.-J., Wang, X., Cheng, Z.-N., & Zhu, Q.-B. (2020) · Critical reviews in biochemistry and molecular biology · doi:10.1080/10409238.2020.1738331 · Cited by 66 · see citing works
Nixon, B., Stanger, S. J., Mihalas, B. P., Reilly, J. N., Anderson, A. L., Dun, M. D., Tyagi, S., Holt, J. E., & McLaughlin, E. A. (2015) · PLoS ONE · doi:10.1371/journal.pone.0135605 · Cited by 67 · see citing works
Iio, A., Takagi, T., Miki, K., Naoe, T., Nakayama, A., & Akao, Y. (2013) · Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms · doi:10.1016/j.bbagrm.2013.07.010 · Cited by 62 · see citing works
Sun, Y., Yang, X., Liu, M., & Tang, H. (2016) · Cancer Letters · doi:10.1016/j.canlet.2016.03.016 · Cited by 62 · see citing works
Dallaire, A., Frédérick, P., & Simard, M. J. (2018) · Developmental Cell · doi:10.1016/j.devcel.2018.08.022 · Cited by 58 · see citing works
MicroRNAs: Diverse Mechanisms of Action and Their Potential Applications as Cancer Epi-Therapeutics
Sadakierska−Chudy, A. (2020) · Biomolecules · doi:10.3390/biom10091285 · Cited by 62 · see citing works
Fbxo4-mediated degradation of Fxr1 suppresses tumorigenesis in head and neck squamous cell carcinoma
Qie, S., Majumder, M., Mackiewicz, K., Howley, B. V., Peterson, Y. K., Howe, P. H., Palanisamy, V., & Diehl, J. A. (2017) · Nature Communications · doi:10.1038/s41467-017-01199-8 · Cited by 60 · see citing works
MiR-155-5p positively regulates CCL17-induced colon cancer cell migration by targeting RhoA
Al-Haidari, A. A., Syk, I., & Thorlacius, H. (2017) · Oncotarget · doi:10.18632/oncotarget.14841 · Cited by 59 · see citing works
Bakre, A. A., Andersen, L. E., Meliopoulos, V., Coleman, K., Yan, X., Brooks, P., Crabtree, J. M., Tompkins, S. M., & Tripp, R. A. (2013) · PLoS ONE · doi:10.1371/journal.pone.0066796 · Cited by 57 · see citing works
microRNAs in Human Adipose Tissue Physiology and Dysfunction
Kuryłowicz, A. (2021) · Cells · doi:10.3390/cells10123342 · Cited by 59 · see citing works
MicroRNAs in the cornea: Role and implications for treatment of corneal neovascularization
Mukwaya, A., Jensen, L. D., Peebo, B. B., & Lagali, N. (2019) · The Ocular Surface · doi:10.1016/j.jtos.2019.04.002 · Cited by 56 · see citing works
Fu, Y., Chen, L., Chen, C., Ge, Y., Kang, M., Song, Z., Li, J., Feng, Y., Huo, Z., He, G., et al. (2018) · Genome Research · doi:10.1101/gr.231506.117 · Cited by 56 · see citing works
The microRNA Lifecycle in Health and Cancer
de Rooij, L. A., Mastebroek, D. J., ten Voorde, N., van der Wall, E., van Diest, P. J., & Moelans, C. B. (2022) · Cancers · doi:10.3390/cancers14235748 · Cited by 58 · see citing works
Nuclear Export Mediated Regulation of MicroRNAs: Potential Target for Drug Intervention
Muqbil, I., Bao, B., Abou‐Samra, A., Mohammad, R. M., & Azmi, A. S. (2013) · Current Drug Targets · doi:10.2174/1389450111314100002 · Cited by 53 · see citing works
Regulation and different functions of the animal microRNA‐induced silencing complex
Frédérick, P., & Simard, M. J. (2021) · Wiley Interdisciplinary Reviews - RNA · doi:10.1002/wrna.1701 · Cited by 50 · see citing works
Noncoding RNAs in Glioblastoma: Emerging Biological Concepts and Potential Therapeutic Implications
Shahzad, U., Krumholtz, S. L., Rutka, J. T., & Das, S. (2021) · Cancers · doi:10.3390/cancers13071555 · Cited by 49 · see citing works
Braný, D., Dvorská, D., Strnádel, J., Matáková, T., Halášová, E., & Škovierová, H. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms222212252 · Cited by 54 · see citing works
Jame-Chenarboo, F., Ng, H. H., Macdonald, D., & Mahal, L. K. (2022) · ACS Central Science · doi:10.1021/acscentsci.2c00748 · Cited by 49 · see citing works
Demystifying the nuclear function of Argonaute proteins
Huang, V., & Li, L. (2014) · RNA Biology · doi:10.4161/rna.27604 · Cited by 49 · see citing works
MiR-124 synergism with ELAVL3 enhances target gene expression to promote neuronal maturity
Lu, Y.-L., Liu, Y., McCoy, M. J., & Yoo, A. S. J. (2021) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2015454118 · Cited by 50 · see citing works
The Role of microRNAs in Epithelial Ovarian Cancer Metastasis
Nguyen, V. H. L., Yue, C., Du, K. Y., Salem, M., O’Brien, J. A., & Peng, C. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21197093 · Cited by 43 · see citing works
Non-coding RNA basis of muscle atrophy
Liu, Q., Deng, J., Qiu, Y., Gao, J., Li, J., Guan, L., Lee, H., Zhou, Q., & Xiao, J. (2021) · Molecular Therapy — Nucleic Acids · doi:10.1016/j.omtn.2021.10.010 · Cited by 44 · see citing works
miR-206 controls LXRα expression and promotes LXR-mediated cholesterol efflux in macrophages
Vinod, M., Chennamsetty, I., Colin, S., Belloy, L., De Paoli, F., Schaider, H., Graier, W. F., Frank, S., Kratky, D., Staels, B., et al. (2014) · Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids · doi:10.1016/j.bbalip.2014.02.006 · Cited by 41 · see citing works
Adegbola, P. I., & Adetutu, A. (2024) · Toxicology Reports · doi:10.1016/j.toxrep.2024.04.010 · Cited by 42 · see citing works
Choi, I., Woo, J. H., Jou, I., & Joe, E.-H. (2016) · Experimental Neurobiology · doi:10.5607/en.2016.25.1.14 · Cited by 40 · see citing works
Androgen Receptor-Related Non-coding RNAs in Prostate Cancer
Yang, Y., Liu, K. Y., Liu, Q., & Cao, Q. (2021) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2021.660853 · Cited by 42 · see citing works
MiRNAs and Muscle Regeneration: Therapeutic Targets in Duchenne Muscular Dystrophy
Aránega, A. E., Lozano-Velasco, E., Rodríguez-Outeiriño, L., de Acuña, F. R., Franco, D., & Hernández‐Torres, F. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22084236 · Cited by 43 · see citing works
Kiang, J. G., Smith, J. T., Anderson, M. N., Elliott, T. B., Gupta, P., Balakathiresan, N. S., Maheshwari, R. K., & Knollmann-Ritschel, B. E. C. (2017) · PLoS ONE · doi:10.1371/journal.pone.0184393 · Cited by 39 · see citing works
Breast Cancer and the Other Non-Coding RNAs
Dvorská, D., Braný, D., Ňachajová, M., Halašová, E., & Danková, Z. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22063280 · Cited by 38 · see citing works
Liu, B., Li, J., Zheng, M., Ge, J., Li, J., & Yu, P. (2017) · Life Sciences · doi:10.1016/j.lfs.2017.08.018 · Cited by 34 · see citing works
Fragile X related protein 1 (FXR1P) regulates proliferation of adult neural stem cells
Patzlaff, N. E., Nemec, K. M., Malone, S. G., Li, Y., & Zhao, X. (2017) · Human Molecular Genetics · doi:10.1093/hmg/ddx034 · Cited by 33 · see citing works
Intrinsic Noise of microRNA-Regulated Genes and the ceRNA Hypothesis
Noorbakhsh, J., Lang, A., & Mehta, P. (2013) · PLoS ONE · doi:10.1371/journal.pone.0072676 · Cited by 32 · see citing works
MicroRNA regulation of critical retinal pigment epithelial functions
Du, S. W., & Palczewski, K. (2021) · Trends in Neurosciences · doi:10.1016/j.tins.2021.10.008 · Cited by 32 · see citing works
Saini, V., Dawar, R., Suneja, S., Gangopadhyay, S., & Kaur, C. (2021) · Egyptian Journal of Medical Human Genetics · doi:10.1186/s43042-020-00125-w · Cited by 31 · see citing works
Immune modulatory microRNAs in tumors, their clinical relevance in diagnosis and therapy
Vaxevanis, C., Bachmann, M. P., & Seliger, B. (2024) · Journal for ImmunoTherapy of Cancer · doi:10.1136/jitc-2024-009774 · Cited by 31 · see citing works
The impact of microRNAs on alterations of gene regulatory networks in allergic diseases
Baskara-Yhuellou, I., & Tost, J. (2020) · Advances in protein chemistry and structural biology · doi:10.1016/bs.apcsb.2019.11.006 · Cited by 28 · see citing works
MicroRNAs in extracellular vesicles: A potential role in cancer progression
Parashar, D., Mukherjee, T., Gupta, S. K., Kumar, U., & Das, K. (2024) · Cellular Signalling · doi:10.1016/j.cellsig.2024.111263 · Cited by 27 · see citing works
Role of microRNAs in the Development of Cardiovascular Disease in Systemic Autoimmune Disorders
López-Pedrera, C., Barbarroja, N., Patiño-Trives, A. M., Luque-Tévar, M., Torres-Granados, C., Aguirre, M. A., Collantes‐Estévez, E., & Pérez‐Sánchez, C. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21062012 · Cited by 28 · see citing works
MicroRNA chemical modifications in post-transcriptional gene silencing and human diseases
Alaei, A., & Kakumani, P. K. (2025) · Molecular Therapy — Nucleic Acids · doi:10.1016/j.omtn.2025.102745 · Cited by 26 · see citing works
MicroRNAs in B-cells: From normal differentiation to treatment of malignancies
Marques, S. C., Laursen, M. B., Bødker, J. S., Kjeldsen, M. K., Falgreen, S., Schmitz, A., Bøgsted, M., Johnsen, H. E., & Dybkaer, K. (2015) · Oncotarget · doi:10.18632/oncotarget.3057 · Cited by 26 · see citing works
Huang, Y., Qi, L., Kogiso, M., Du, Y., Braun, F., Zhang, H., Huang, L. F., Xiao, S., Teo, W., Lindsay, H., et al. (2021) · Advanced Science · doi:10.1002/advs.202101923 · Cited by 26 · see citing works
isomiRs–Hidden Soldiers in the miRNA Regulatory Army, and How to Find Them?
Glogovitis, I., Yahubyan, G. T., Würdinger, T., Koppers‐Lalic, D., & Baev, V. (2020) · Biomolecules · doi:10.3390/biom11010041 · Cited by 25 · see citing works
Kinkade, J. A., Seetharam, A. S., Sachdev, S., Bivens, N. J., Phinney, B. S., Grigorean, G., Roberts, R. M., Tuteja, G., & Rosenfeld, C. S. (2023) · Biology of Reproduction · doi:10.1093/biolre/ioad146 · Cited by 26 · see citing works
The role of miR-106p-5p in cervical cancer: from expression to molecular mechanism
Yi, Y., Liu, Y., Wu, W., Wu, K., & Zhang, W. (2018) · Cell Death Discovery · doi:10.1038/s41420-018-0096-8 · Cited by 23 · see citing works
The Heart: Mostly Postmitotic or Mostly Premitotic? Myocyte Cell Cycle, Senescence, and Quiescence
Siddiqi, S., & Sussman, M. A. (2014) · Canadian Journal of Cardiology · doi:10.1016/j.cjca.2014.08.014 · Cited by 23 · see citing works
Regulation of monocyte induced cell migration by the RNA binding protein, FXR1
Tonquèze, O. L., Kollu, S., Lee, S., Al-Salah, M., Truesdell, S. S., & Vasudevan, S. (2016) · Cell Cycle · doi:10.1080/15384101.2016.1189040 · Cited by 21 · see citing works
Epigenetic Regulation in Exposome-Induced Tumorigenesis: Emerging Roles of ncRNAs
Olmedo-Suárez, M. Á., Ramírez‐Díaz, I., Pérez-González, A., Molina-Herrera, A., Coral-García, M. Á., Lobato, S., Sarvari, P., Barreto, G., & Rubio, K. (2022) · Biomolecules · doi:10.3390/biom12040513 · Cited by 22 · see citing works
Potential Therapeutic Agents That Target ATP Binding Cassette A1 (ABCA1) Gene Expression
Haas, M. J., & Mooradian, A. D. (2022) · Drugs · doi:10.1007/s40265-022-01743-x · Cited by 22 · see citing works
microRNA expression in acute myeloid leukaemia: New targets for therapy?
Fletcher, D. M., Brown, E., Javadala, J., Onganer, P. U., & Guinn, B. (2022) · eJHaem · doi:10.1002/jha2.441 · Cited by 20 · see citing works
Abdelrahman, S. A., El‐Shal, A. S., Abdelrahman, A. A., Hassen, E., & Mahmoud, A. A. E. (2022) · Tissue Barriers · doi:10.1080/21688370.2022.2115273 · Cited by 21 · see citing works
CLIP: viewing the RNA world from an RNA-protein interactome perspective
Zhang, Y., Xie, S., Xu, H. M., & Qu, L. (2015) · Science China Life Sciences · doi:10.1007/s11427-014-4764-5 · Cited by 20 · see citing works
microRNAs stimulate translation initiation mediated by HCV-like IRESes
Mengardi, C., Limousin, T., Ricci, E. P., Soto‐Rifo, R., Décimo, D., & Ohlmann, T. (2016) · Nucleic Acids Research · doi:10.1093/nar/gkw1345 · Cited by 21 · see citing works
Can cytoplasmic donation rescue aged oocytes?
Tanaka, A., & Watanabe, S. (2018) · Reproductive Medicine and Biology · doi:10.1002/rmb2.12252 · Cited by 20 · see citing works
Regulation of Adult Neurogenesis by the Fragile X Family of RNA Binding Proteins
Patzlaff, N. E., Shen, M., & Zhao, X. (2017) · Brain Plasticity · doi:10.3233/bpl-170061 · Cited by 16 · see citing works
Wang, L., Zhang, S., Zhang, W., Cheng, G., Khan, R., Junjvlieke, Z., Li, S., & Zan, L. (2020) · Frontiers in Genetics · doi:10.3389/fgene.2020.00145 · Cited by 19 · see citing works
Epigenetic Contribution and Genomic Imprinting Dlk1-Dio3 miRNAs in Systemic Lupus Erythematosus
Dai, R., Wang, Z., & Ahmed, S. A. (2021) · Genes · doi:10.3390/genes12050680 · Cited by 18 · see citing works
Yang, L., Weiss, B. L., Williams, A. E., Aksoy, E., Orfano, A. S., Son, J. H., Wu, Y., Vigneron, A., Karakuş, M., & Aksoy, S. (2021) · PLoS Pathogens · doi:10.1371/journal.ppat.1009475 · Cited by 18 · see citing works
MicroRNAs as Biomarkers and Therapeutic Targets in Female Infertility
Chico-Sordo, L., & García-Velasco, J. A. (2024) · International Journal of Molecular Sciences · doi:10.3390/ijms252312979 · Cited by 19 · see citing works
Noncoding RNAs in apoptosis: identification and function
Tüncel, Ö., Kara, M., Yaylak, B., Erdoğan, İ., & Akgül, B. (2021) · TURKISH JOURNAL OF BIOLOGY · doi:10.3906/biy-2109-35 · Cited by 16 · see citing works
An atlas of small non-coding RNAs in human preimplantation development
Russell, S. J., Zhao, C., Biondic, S., Menezes, K., Hagemann-Jensen, M., Librach, C. L., & Sophie Petropoulos, A. (2024) · Nature Communications · doi:10.1038/s41467-024-52943-w · Cited by 17 · see citing works
Petracci, I., Bellini, S., Goljanek‐Whysall, K., Quinlan, L. R., Fiszer, A., Cakmak, A., Njume, C. M., Borroni, B., & Ghidoni, R. (2025) · International Journal of Molecular Sciences · doi:10.3390/ijms26073399 · Cited by 14 · see citing works
Chen, W., Cui, Y., Ning, M., Zhang, H., Yin, C., & He, Z. (2021) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2021.05.003 · Cited by 14 · see citing works
Vemuganti, R., Silva, V. R., Mehta, S. L., & Hazell, A. S. (2014) · Metabolic Brain Disease · doi:10.1007/s11011-014-9545-0 · Cited by 14 · see citing works
Wilkus, K., Brodaczewska, K. K., Majewska, A., & Kiéda, C. (2023) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2023.1125077 · Cited by 13 · see citing works
FXR1a-associated microRNP: A driver of specialized non-canonical translation in quiescent conditions
Bukhari, S. I. A., & Vasudevan, S. (2016) · RNA Biology · doi:10.1080/15476286.2016.1265197 · Cited by 13 · see citing works
Bawazeer, A. M., & Prince, D. C. (2023) · Methods in molecular biology · doi:10.1007/978-1-0716-2982-6_1 · Cited by 13 · see citing works
Lin, C., Law, B. F., Siegel, P. D., & Hettick, J. M. (2018) · Biomarkers · doi:10.1080/1354750x.2018.1508308 · Cited by 13 · see citing works
Diverse roles of biomolecular condensation in eukaryotic translational regulation
Zhang, Y.-H., Kang, J.-Y., Liu, M.-F., & Huang, Y. (2023) · RNA Biology · doi:10.1080/15476286.2023.2275108 · Cited by 9 · see citing works
MicroRNAs as Prognostic Biomarkers and Therapeutic Targets in Chondrosarcoma
Skipar, P., Dey, M., Piątkowski, J., Sulejczak, D., Rutkowski, P. L., & Czarnecka, A. M. (2024) · International Journal of Molecular Sciences · doi:10.3390/ijms25063176 · Cited by 12 · see citing works
The Potential Role of miRNAs as Predictive Biomarkers in Neurodevelopmental Disorders
Juvale, I. I. A., & Has, A. T. C. (2021) · Journal of Molecular Neuroscience · doi:10.1007/s12031-021-01825-7 · Cited by 14 · see citing works
Noncoding RNAs: A New Layer of Functional RNAs
Gürer, D. C., & Akgül, B. (2022) · Current Pharmaceutical Biotechnology · doi:10.2174/1389201023666220602102133 · Cited by 11 · see citing works
Zhang, L., Li, Y., Kuhn, J. H., Zhang, K., Song, Q., & Liu, F. (2024) · PLoS Pathogens · doi:10.1371/journal.ppat.1012112 · Cited by 11 · see citing works
- Authors
- Truesdell, S. S., Mortensen, R. D., Seo, M., Schroeder, J. C., Lee, J. H., LeTonqueze, O., & Vasudevan, S.
- Affiliations
- Harvard University (US)
- Corresponding author
- Vasudevan, S.
- Venue
- Scientific Reports
- Published
- 2012-11-13
- Volume
- 2
- Issue
- 1
- Pages
- 842-842
- ISSN
- 2045-2322 (ISSN-L)
- PMC
- PMC3496365
- OpenAlex
- W2122142258
- Cited by
- 173
- References
- 60
- Citations by year
- 2026: 3 · 2025: 19 · 2024: 15 · 2023: 16 · 2022: 18 · 2021: 21 · 2020: 14 · 2019: 9 · 2018: 10 · 2017: 10 · 2016: 13 · 2015: 7 · 2014: 10 · 2013: 7 · 2012: 1
- FWCI
- 2.65
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- Scientific Reports (publishedVersion, cc-by-nc-nd)
- Europe PMC (PubMed Central) (publishedVersion, cc-by-nc-nd)
- PubMed Central (publishedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- Digital Access to Scholarship at Harvard (DASH) (Harvard University) (submittedVersion, cc-by)
- Funders
- Cancer Research Institute
- Richard and Susan Smith Family Foundation
- Leukemia and Lymphoma Society
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › MicroRNA in disease regulation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Interference and Gene Delivery
- Keywords
- microRNA, Argonaute 2, FXR1, quiescent cells, G0 phase, oocytes, AU-rich elements, TNF-α, Myt1, protein synthesis inhibition
- MeSH terms
- Animals, Cell Line, Cell Nucleus, Cytoplasm, Humans, Oocytes, Protein-Tyrosine Kinases, RNA, Messenger, Protein Biosynthesis, Xenopus laevis, Up-Regulation, Resting Phase, Cell Cycle, RNA-Binding Proteins, Protein Serine-Threonine Kinases, Xenopus Proteins, MicroRNAs, Argonaute Proteins
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review