Cerebellar neurodegeneration in the absence of microRNAs
Abstract
Genome-encoded microRNAs (miRNAs) are potent regulators of gene expression. The significance of miRNAs in various biological processes has been suggested by studies showing an important role of these small RNAs in regulation of cell differentiation. However, the role of miRNAs in regulation of differentiated cell physiology is not well established. Mature neurons express a large number of distinct miRNAs, but the role of miRNAs in postmitotic neurons has not been examined. Here, we provide evidence for an essential role of miRNAs in survival of differentiated neurons. We show that conditional Purkinje cell–specific ablation of the key miRNA-generating enzyme Dicer leads to Purkinje cell death. Deficiency in Dicer is associated with progressive loss of miRNAs, followed by cerebellar degeneration and development of ataxia. The progressive neurodegeneration in the absence of Dicer raises the possibility of an involvement of miRNAs in neurodegenerative disorders.
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Conditional ablation of Dicer in murine post-mitotic Purkinje cells results in progressive loss of miRNAs, cerebellar degeneration, and development of ataxia.
“In addition, conditional ablation of Dicer in murine post-mitotic Purkinje cells resulted in progressive loss of miRNAs, cerebellar degeneration, and development of ataxia (Schaefer et al. 2007).”
From MicroRNA expression in the adult mouse central nervous system (2008) · cites this paper as Schaefer et al. 2007
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Sempere, L. F., Freemantle, S., Pitha-Rowe, I., Moss, E., Dmitrovsky, E., & Ambros, V. (2004) · Genome Biology · doi:10.1186/gb-2004-5-3-r13 · Cited by 1,578 · see citing works
A microRNA array reveals extensive regulation of microRNAs during brain development
KRICHEVSKY, A. M., KING, K. S., DONAHUE, C. P., KHRAPKO, K., & KOSIK, K. S. (2003) · RNA · doi:10.1261/rna.5980303 · Cited by 1,040 · see citing works
Regulation of miRNA expression during neural cell specification
Smirnova, L., Gräfe, A., Seiler, A., Schumacher, S., Nitsch, R., & Wulczyn, F. G. (2005) · European Journal of Neuroscience · doi:10.1111/j.1460-9568.2005.03978.x · Cited by 707 · see citing works
Morphogenesis in skin is governed by discrete sets of differentially expressed microRNAs
Yi, R., O'Carroll, D., Pasolli, H. A., Zhang, Z., Dietrich, F. S., Tarakhovsky, A., & Fuchs, E. (2006) · Nature Genetics · doi:10.1038/ng1744 · Cited by 555 · see citing works
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Research works printed but not linked: 26
- [1]Ambros, V. 2004. The functions of animal microRNAs. Nature. 431: 350–355. 15372042
- [2]Bartel, D.P. 2004. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell. 116: 281–297. 14744438
- [3]He, L., and G.J. Hannon. 2004. MicroRNAs: small RNAs with a big role in gene regulation. Nat. Rev. Genet. 5: 522–531. 15211354
- [4]Cobb, B.S., T.B. Nesterova, E. Thompson, A. Hertweck, E. O'Connor, J. Godwin, C.B. Wilson, N. Brockdorff, A.G. Fisher, S.T. Smale, and M. Merkenschlager. 2005. T cell lineage choice and differentiation in the absence of the RNase III enzyme Dicer. J. Exp. Med. 201: 1367–1373. 15867090 PMC2213187
- [5]Cobb, B.S., A. Hertweck, J. Smith, E. O'Connor, D. Graf, T. Cook, S.T. Smale, S. Sakaguchi, F.J. Livesey, A.G. Fisher, and M. Merkenschlager. 2006. A role for Dicer in immune regulation. J. Exp. Med. 203: 2519–2527. 17060477 PMC2118134
- [6]Muljo, S.A., K.M. Ansel, C. Kanellopoulou, D.M. Livingston, A. Rao, and K. Rajewsky. 2005. Aberrant T cell differentiation in the absence of Dicer. J. Exp. Med. 202: 261–269. 16009718 PMC2212998
- [8]Harfe, B.D., M.T. McManus, J.H. Mansfield, E. Hornstein, and C.J. Tabin. 2005. The RNaseIII enzyme Dicer is required for morphogenesis but not patterning of the vertebrate limb. Proc. Natl. Acad. Sci. USA. 102: 10898–10903. 16040801 PMC1182454
- [9]Li, Q.J., J. Chau, P.J. Ebert, G. Sylvester, H. Min, G. Liu, R. Braich, M. Manoharan, J. Soutschek, P. Skare, et al. 2007. miR-181a is an intrinsic modulator of T cell sensitivity and selection. Cell. 129: 147–161. 17382377
- [10]Zhao, Y., J.F. Ransom, A. Li, V. Vedantham, M. von Drehle, A.N. Muth, T. Tsuchihashi, M.T. McManus, R.J. Schwartz, and D. Srivastava. 2007. Dysregulation of cardiogenesis, cardiac conduction, and cell cycle in mice lacking miRNA-1-2. Cell. 129: 303–317. 17397913
- [11]van Rooij, E., L.B. Sutherland, X. Qi, J.A. Richardson, J. Hill, and E.N. Olson. 2007. Control of stress-dependent cardiac growth and gene expression by a microRNA. Science. 316: 575–579. 17379774
- [12]Babak, T., W. Zhang, Q. Morris, B.J. Blencowe, and T.R. Hughes. 2004. Probing microRNAs with microarrays: tissue specificity and functional inference. RNA. 10: 1813–1819. 15496526 PMC1370668
- [13]Barad, O., E. Meiri, A. Avniel, R. Aharonov, A. Barzilai, I. Bentwich, U. Einav, S. Gilad, P. Hurban, Y. Karov, et al. 2004. MicroRNA expression detected by oligonucleotide microarrays: system establishment and expression profiling in human tissues. Genome Res. 14: 2486–2494. 15574827 PMC534673
- [14]Miska, E.A., E. Alvarez-Saavedra, M. Townsend, A. Yoshii, N. Sestan, P. Rakic, M. Constantine-Paton, and H.R. Horvitz. 2004. Microarray analysis of microRNA expression in the developing mammalian brain. Genome Biol. 5: R68. 15345052 PMC522875
- [16]Lagos-Quintana, M., R. Rauhut, A. Yalcin, J. Meyer, W. Lendeckel, and T. Tuschl. 2002. Identification of tissue-specific microRNAs from mouse. Curr. Biol. 12: 735–739. 12007417
- [19]Lim, L.P., N.C. Lau, P. Garrett-Engele, A. Grimson, J.M. Schelter, J. Castle, D.P. Bartel, P.S. Linsley, and J.M. Johnson. 2005. Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs. Nature. 433: 769–773. 15685193
- [20]Vo, N., M.E. Klein, O. Varlamova, D.M. Keller, T. Yamamoto, R.H. Goodman, and S. Impey. 2005. A cAMP-response element binding protein-induced microRNA regulates neuronal morphogenesis. Proc. Natl. Acad. Sci. USA. 102: 16426–16431. 16260724 PMC1283476
- [21]Schratt, G.M., F. Tuebing, E.A. Nigh, C.G. Kane, M.E. Sabatini, M. Kiebler, and M.E. Greenberg. 2006. A brain-specific microRNA regulates dendritic spine development. Nature. 439: 283–289. 16421561
- [22]Bernstein, E., A.A. Caudy, S.M. Hammond, and G.J. Hannon. 2001. Role for a bidentate ribonuclease in the initiation step of RNA interference. Nature. 409: 363–366. 11201747
- [23]Bernstein, E., S.Y. Kim, M.A. Carmell, E.P. Murchison, H. Alcorn, M.Z. Li, A.A. Mills, S.J. Elledge, K.V. Anderson, and G.J. Hannon. 2003. Dicer is essential for mouse development. Nat. Genet. 35: 215–217. 14528307
- [24]Zhang, X.M., A.H. Ng, J.A. Tanner, W.T. Wu, N.G. Copeland, N.A. Jenkins, and J.D. Huang. 2004. Highly restricted expression of Cre recombinase in cerebellar Purkinje cells. Genesis. 40: 45–51. 15354293
- [25]Mao, X., Y. Fujiwara, A. Chapdelaine, H. Yang, and S.H. Orkin. 2001. Activation of EGFP expression by Cre-mediated excision in a new ROSA26 reporter mouse strain. Blood. 97: 324–326. 11133778
- [26]Wetts, R., and K. Herrup. 1983. Direct correlation between Purkinje and granule cell number in the cerebella of lurcher chimeras and wild-type mice. Brain Res. 312: 41–47. 6652508
- [27]Caddy, K.W., and T.J. Biscoe. 1979. Structural and quantitative studies on the normal C3H and Lurcher mutant mouse. Philos. Trans. R. Soc. Lond. B Biol. Sci. 287: 167–201. 41272
- [28]Lee, K.W., Y. Kim, A.M. Kim, K. Helmin, A.C. Nairn, and P. Greengard. 2006. Cocaine-induced dendritic spine formation in D1 and D2 dopamine receptor-containing medium spiny neurons in nucleus accumbens. Proc. Natl. Acad. Sci. USA. 103: 3399–3404. 16492766 PMC1413917
- [29]Kloosterman, W.P., E. Wienholds, E. de Bruijn, S. Kauppinen, and R.H. Plasterk. 2006. In situ detection of miRNAs in animal embryos using LNA-modified oligonucleotide probes. Nat. Methods. 3: 27–29. 16369549
- [30]Hirata, K., M. Nakagawa, F.J. Urbano, M.D. Rosato-Siri, J.E. Moreira, O.D. Uchitel, M. Sugimori, and R. Llinas. 1999. Reduced facilitation and vesicular uptake in crustacean and mammalian neuromuscular junction by T-588, a neuroprotective compound. Proc. Natl. Acad. Sci. USA. 96: 14588–14593. 10588749 PMC24480
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- Authors
- Schaefer, A., O'Carroll, D., Tan, C. L., Hillman, D., Sugimori, M., Llinas, R., & Greengard, P.
- Affiliations
- 1Laboratory of Molecular and Cellular Neuroscience and
- 2Laboratory of Lymphocyte Signaling, The Rockefeller University, New York, NY 10021
- 3Department of Otolaryngology and
- 4Department of Physiology and Neuroscience, New York University School of Medicine, New York, NY 10016
- Venue
- The Journal of Experimental Medicine
- Publisher
- Rockefeller University Press
- Published
- 2007-07-02
- Volume
- 204
- Issue
- 7
- Pages
- 1553-1558
- ISSN
- 1540-9538
- 0022-1007
- PMC
- PMC2118654
- Cited by
- 426
- References
- 4
- Language
- en
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