The DOI matches its Crossref record; 70 of the 70 references it cites were found in a registry or an index; 40 of the 53 sources its claims cite were checked for support.
APOE3 -Jacksonville (V236E) variant reduces self-aggregation and risk of dementia
Open accessAbstract
A rare APOE variant APOE3 -Jac reduces self-aggregation and promotes healthy brain aging.
Overview
AI snapshot
Written from the paper’s full text.
TL;DR
The APOE3-Jacksonville (V236E) variant is associated with reduced risk of Alzheimer’s disease and dementia with Lewy bodies and promotes healthy brain aging. Mechanistically, V236E reduces apoE self-aggregation, increases apoE lipidation, and lowers amyloid pathology and plaque-associated toxicity in human tissue and mouse models.
Key findings
- APOE3-Jac carriers had reduced AD risk (OR = 0.10, 95% CI 0.03–0.45), comparable to or better than APOE2 (OR = 0.46, 95% CI 0.38–0.54); the variant was found at 0.12% frequency on the APOE3 backbone and at an overall 2.0% carrier frequency in exceptional-aging subjects.
- In human brains, APOE3-Jac carriers showed reduced insoluble apoE, increased soluble/insoluble apoE ratios, lower soluble Aβ42 and insoluble Aβ40/Aβ42, and fewer cored Aβ plaques.
- Biochemically, WT apoE3 eluted primarily as 4–6 molecule aggregates, whereas apoE3-Jac eluted as monomers; apoE3-Jac also promoted greater cholesterol efflux. The V236E substitution reduced apoE4 aggregation, with apoE4 existing primarily as tetramers at 30 μM while apoE4-Jac consisted mostly of dimers.
- In 5xFAD mice, astrocytic AAV-apoE3-Jac expression reduced amyloid deposition, insoluble Aβ40/Aβ42, fibrillar plaques, plaque-associated apoE, microglial clustering, dystrophic neurites, and reactive astrocyte markers compared with apoE3; behavioral improvement was a trend.
Methods
- Human genetic and pathological analyses included exome sequencing in exceptional-aging brains (n=46/108 test; n=62/108 validation), an antemortem PET exceptional-aging series (n=45), DLB clinical cases (n=441), pathologically defined DLB cases (n=622), clinical controls (n=975), and an AD pathological cohort (n=469). Biochemical comparisons used APOE3 (n=8) and APOE3-Jac (n=3) postmortem frontal cortex samples (average age 90.13 ± 2.8 years).
- Cellular and biochemical assays used site-directed mutagenesis, HEK293 expression, size exclusion chromatography/FPLC, chemical cross-linking, heparin binding, cholesterol efflux with BODIPY-cholesterol, immunoprecipitation, lipidomics, and analytical ultracentrifugation.
- Mouse experiments used AAV8-GFAP-apoE3 or AAV8-GFAP-apoE3-Jac delivered intracerebroventricularly at postnatal day 2 into 5xFAD amyloid model mice, followed by amyloid, plaque, glial, neuritic dystrophy, and behavioral analyses.
Limitations
- The paper states that the APOE3-Jac variant is rare (MAF 0.12%), so human brain analyses had small sample sizes and require replication in much larger cohorts; the DLB finding was not statistically significant (P=0.11).
- The paper notes that it is difficult to distinguish whether apoE self-aggregation alone, apoE-Aβ aggregation, or both drive AD progression, and that end-stage amyloid assessments may not fully recapitulate early apoE effects on Aβ seeding.
- The paper states that the cognitive benefit in amyloid model mice was only a trend and not apparent at 4 months of age, warranting further aging studies; human microglial analysis was limited because amyloid deposition was undetectable in 2 of 3 APOE3/3-Jac brains.
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Claims the paper makes
40 of 53 cited sources checked · 21 supported · 0 flagged · accuracy not yet measured
The sources with a verdict support this claim; the rest weren’t checked yet, have no full text we could read, or their verdicts aren’t rated yet.
In the paper
“Notably, the apoE3-V236E substitution is the first AD-associated variant within the C-terminal domain, a region critical for apoE oligomerization and lipidation (10, 36).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Supportedcites [10] Medway CW, Abdul-Hay S, Mims T, Ma L, Bisceglio G, Zou F, Pankratz S, Sando SB, Aasly JO, Barcikowska M, Siuda J, Wszolek ZK, Ross OA, Carrasquillo M, Dickson DW, Graff-Radford N, Petersen RC, Ertekin-Taner N, Morgan K, Bu G, Younkin SG, ApoE variant p.V236E is associated with markedly reduced risk of Alzheimer’s disease. Mol Neurodegener 9, 11 (2014). 24607147 PMC3995879 source
The Abstract calls p.V236E the first disease-associated change in apoE’s lipid-binding C-terminal domain. The Discussion identifies it as the first late-onset Alzheimer’s disease-associated variant to alter a C-terminal amino acid and places residue 236 within a region important for oligomerization, near the lipid-binding domain. (LLM, conf=0.90)
- Not checked — no full text of the sourcecites [36] Frieden C, Garai K, Structural differences between apoE3 and apoE4 may be useful in developing therapeutic agents for Alzheimer’s disease. Proc Natl Acad Sci U S A 109, 8913– 8918 (2012). 22615372 PMC3384159 source
Strength:plain· not yet calibratedCausal:correlational· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passes- Supported
The sources with a verdict support this claim; the rest weren’t checked yet, have no full text we could read, or their verdicts aren’t rated yet.
In the paper
“Lipid-free apoE tends to self-aggregate in aqueous solution due to the hydrophobic interaction between amphipathic α-helices in the C-terminal domain (17, 18).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant reduces self-association and increases lipidation
What the sources say
- Supportedcites [17] Lund-Katz S, Phillips MC, High density lipoprotein structure-function and role in reverse cholesterol transport. Subcell Biochem 51, 183– 227 (2010). 20213545 PMC3215094 source
Section 7.2.3 states that lipid-free apoE self-associates in aqueous solution through hydrophobic interactions between amphipathic α-helices. It further identifies the hydrophobic C-terminal domain as responsible for apoE self-association. No page number is provided in the supplied passages. (LLM, conf=0.94)
- Not checked — no full text of the sourcecites [18] Choy N, Raussens V, Narayanaswami V, Inter-molecular coiled-coil formation in human apolipoprotein E C-terminal domain. J Mol Biol 334, 527– 539 (2003). 14623192 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passes- Supported
The sources with a verdict support this claim; the rest weren’t checked yet, have no full text we could read, or their verdicts aren’t rated yet.
In the paper
“As apoE co-deposits with Aβ in the amyloid plaques (13–15), we examined and found that the degree of co-localization between apoE and Aβ deposition appeared to decrease in the brains carrying APOE3-Jac variant compared to those from APOE3 (Fig. S1C–F).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant is associated with healthy brain aging, reduced insoluble apoE and decreased AD pathology
What the sources say
- Not checked — no full text of the sourcecites [13] Ma J, Yee A, Brewer HB Jr., Das S, Potter H, Amyloid-associated proteins alpha 1-antichymotrypsin and apolipoprotein E promote assembly of Alzheimer beta-protein into filaments. Nature 372, 92– 94 (1994). 7969426 source
- Supportedcites [14] Sadowski MJ, Pankiewicz J, Scholtzova H, Mehta PD, Prelli F, Quartermain D, Wisniewski T, Blocking the apolipoprotein E/amyloid-beta interaction as a potential therapeutic approach for Alzheimer’s disease. Proc Natl Acad Sci U S A 103, 18787– 18792 (2006). 17116874 PMC1654132 source
The citation supports the sentence’s background premise, not the citing authors’ own APOE3-Jac comparison. In Results and Discussion, the source states that fibrillar Aβ deposits contain codeposited fragments of apoE; the APOE3-Jac finding is explicitly presented as something the citing authors examined and found. (LLM, conf=0.92)
- Not checked — no full text of the sourcecites [15] Namba Y, Tomonaga M, Kawasaki H, Otomo E, Ikeda K, Apolipoprotein E immunoreactivity in cerebral amyloid deposits and neurofibrillary tangles in Alzheimer’s disease and kuru plaque amyloid in Creutzfeldt-Jakob disease. Brain Res. 541, 163– 166 (1991). 2029618 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesThe cited sources support only part of this claim — read each source’s verdict below.
In the paper
“By examining the genes known to play a role in neurodegenerative disorders we again identified APOE3-Jac variant in one of the exceptional aging brains (Fig. 1A) (10).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant is associated with healthy brain aging, reduced insoluble apoE and decreased AD pathology
What the sources say
- Partly supportedcites [10] Medway CW, Abdul-Hay S, Mims T, Ma L, Bisceglio G, Zou F, Pankratz S, Sando SB, Aasly JO, Barcikowska M, Siuda J, Wszolek ZK, Ross OA, Carrasquillo M, Dickson DW, Graff-Radford N, Petersen RC, Ertekin-Taner N, Morgan K, Bu G, Younkin SG, ApoE variant p.V236E is associated with markedly reduced risk of Alzheimer’s disease. Mol Neurodegener 9, 11 (2014). 24607147 PMC3995879 sourceExperimental — accuracy not yet measured
The Results and Discussion (no page available) identify APOE p.V236E as a variant on the APOE ε3 backbone, supporting the citation’s use as background for an APOE3 variant. Our copy does not call it “APOE3-Jac” or report exome sequencing of 46 exceptional-aging individuals or its identification in one such brain; the paper instead describes an EVS-based search and genotyping in a larger case-control series. (LLM, conf=0.76)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passes- Partly supported
Every source the paper cites for this claim was checked and supports it.
In the paper
“Imperatively, the aggregation propensity of apoE likely influences its lipidation capacity (22), as dissociation of apoE oligomers to monomers appears to be required for lipid binding to the protein (46).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Supportedcites [46] Garai K, Baban B, Frieden C, Dissociation of apolipoprotein E oligomers to monomer is required for high-affinity binding to phospholipid vesicles. Biochemistry 50, 2550– 2558 (2011). 21322570 PMC3088999 source
The Discussion (‘Conformational changes and lipidation’) states that, in the authors’ scheme, apoE oligomers first dissociate to monomers before binding to lipids. The Discussion (‘Only monomer binds to lipids’) also says dissociation is necessary for formation of the final lipoprotein particles, while acknowledging possible lower-affinity binding by oligomers. The citing sentence’s ‘appears’ reflects that qualification. (LLM, conf=0.90)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passes- Supported
Every source the paper cites for this claim was checked and supports it.
In the paper
“Imperatively, the aggregation propensity of apoE likely influences its lipidation capacity (22), as dissociation of apoE oligomers to monomers appears to be required for lipid binding to the protein (46).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Supportedcites [22] Hu J, Liu CC, Chen XF, Zhang YW, Xu H, Bu G, Opposing effects of viral mediated brain expression of apolipoprotein E2 (apoE2) and apoE4 on apoE lipidation and Abeta metabolism in apoE4-targeted replacement mice. Mol Neurodegener 10, 6 (2015). 25871773 PMC4356137 source
The Discussion states that apoE4 more readily self-aggregates, which may affect its lipidation capacity. That directly supports the citing sentence’s hedged claim, although the paper discusses the relationship specifically for apoE4. (LLM, conf=0.92)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passes- Supported
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“Interestingly, a recent population study from Denmark performed APOE sequencing and re-genotyping in 105,597 subjects (48). The APOE3-Jac variant was associated with a reduced risk of developing dementia, with a hazard ratio of 0.30 and a p-value of 0.09 that approaches statistical significance.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Partly supportedcites [48] Rasmussen KL, Tybjaerg-Hansen A, Nordestgaard BG, Frikke-Schmidt R, APOE and dementia - resequencing and genotyping in 105,597 individuals. Alzheimers Dement 16, 1624– 1637 (2020). 32808727 PMC7984319 sourceExperimental — accuracy not yet measured
The Results section (page unavailable) reports an all-dementia hazard ratio of 0.30 (95% CI 0.08–1.22) for carriers of Val254Glu versus non-carriers in this population study. Our copy does not identify Val254Glu as APOE3-Jac or report the cited p-value of 0.09; the Discussion says the study did not find a risk association for Val254Glu. Thus the numerical estimate is supported, but describing reduced risk as an established association overstates the result. (LLM, conf=0.86)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passes- Partly supported
Every source the paper cites for this claim was checked and supports it.
In the paper
“ApoE was shown to regulate the metabolism of sulfatide whose depletion was observed in the early stages of AD and amyloid model mice in an age-dependent manner (41, 42).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Supportedcites [41] Han X, Cheng H, Fryer JD, Fagan AM, Holtzman DM, Novel role for apolipoprotein E in the central nervous system. Modulation of sulfatide content. J Biol Chem 278, 8043– 8051 (2003). 12501252 source
The Abstract states that apoE regulates brain sulfatide levels through apoE-containing CNS lipoproteins that carry sulfatide and regulate its metabolism. This directly supports the attributed claim. (LLM, conf=0.94)
- Supportedcites [42] Cheng H, Zhou Y, Holtzman DM, Han X, Apolipoprotein E mediates sulfatide depletion in animal models of Alzheimer’s disease. Neurobiol Aging 31, 1188– 1196 (2010). 18762354 PMC2873070 source
The Introduction states that apoE modulates sulfatide content through metabolic pathways involving apoE-containing lipoproteins. The Discussion also says apoE plays a role in sulfatide metabolism, trafficking, and homeostasis. (LLM, conf=0.94)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passes- Supported
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“Brain lipidomics analysis indicates that apoE3-Jac expression increases several classes of lipids, such as PS, PE, sulfatide, cerebroside and PA, which are important to cognitive functions (38–40).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Partly supportedcites [38] Kim HY, Huang BX, Spector AA, Phosphatidylserine in the brain: metabolism and function. Prog Lipid Res 56, 1– 18 (2014). 24992464 PMC4258547 sourceExperimental — accuracy not yet measured
Section 9.1 (page unavailable) reports cognitive improvements after PS supplementation, supporting a link between PS and cognition. The paper discusses PE mainly as a substrate for PS synthesis; the passages found do not establish cognitive roles for PE, sulfatide, cerebroside, or PA. The apoE3-Jac lipidomics result is presented as the citing authors’ own finding, not as a claim attributed to this source. (LLM, conf=0.87)
- Not checked — no full text of the sourcecites [39] Eckhardt M, The role and metabolism of sulfatide in the nervous system. Mol Neurobiol 37, 93– 103 (2008). 18465098 source
- Partly supportedcites [40] Kao YC, Ho PC, Tu YK, Jou IM, Tsai KJ, Lipids and Alzheimer’s Disease. Int J Mol Sci 21, (2020). PMC7073164 32098382 sourceExperimental — accuracy not yet measured
Section 11.1 reports that PE is reduced in Alzheimer’s disease brains and that some PE reductions correlate with disease severity; section 12.4 reports an early decline in sulfatides. The review identifies cerebrosides as sphingolipids (section 12), but these passages do not establish that PS, cerebroside and PA are important to cognitive functions, or make that claim for all five listed classes. The apoE3-Jac increase is not the part attributed to this source. (LLM, conf=0.82)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passes- Partly supported
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“The assessments of apoE-Aβ aggregates at the end stage of amyloid development may not fully recapitulate the apoE effects on Aβ seeding at the initial stage (47).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Partly supportedcites [47] Liu CC, Zhao N, Fu Y, Wang N, Linares C, Tsai CW, Bu G, ApoE4 Accelerates Early Seeding of Amyloid Pathology. Neuron 96, 1024– 1032 e1023 (2017). 29216449 PMC5948105 sourceExperimental — accuracy not yet measured
The Results and Discussion (page not available in our copy) show that astrocytic apoE4 has a strong effect during initial Aβ seeding but little effect when expressed after that stage, supporting the concern that timing matters. The paper does not directly assess whether measurements of apoE-Aβ aggregates at the end stage recapitulate those early effects. (LLM, conf=0.82)
Strength:hedged· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passes- Partly supported
- It may state two separate claims as one. 41
- Probably not a substantial claim. 20
- The quote only partly states this claim. 1
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“We previously identified the APOE3-V236E variant to be protective against AD dementia with a population carrier frequency of 0.3% (10).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > INTRODUCTION
What the sources say
- Partly supportedcites [10] Medway CW, Abdul-Hay S, Mims T, Ma L, Bisceglio G, Zou F, Pankratz S, Sando SB, Aasly JO, Barcikowska M, Siuda J, Wszolek ZK, Ross OA, Carrasquillo M, Dickson DW, Graff-Radford N, Petersen RC, Ertekin-Taner N, Morgan K, Bu G, Younkin SG, ApoE variant p.V236E is associated with markedly reduced risk of Alzheimer’s disease. Mol Neurodegener 9, 11 (2014). 24607147 PMC3995879 sourceExperimental — accuracy not yet measured
The Results and Discussion report that APOE3-V236E is associated with markedly reduced risk of late-onset Alzheimer’s disease. They do not report a 0.3% population carrier frequency: the Discussion gives a 0.12% minor allele frequency in European Americans, while the Results report carriers in a case-control sample. Those figures do not establish the stated population carrier frequency. (LLM, conf=0.85)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Partly supported
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“The ε4 allele of the apolipoprotein E (APOE) gene is the major genetic risk factor for AD and dementia with Lewy bodies (DLB) (1, 5, 6), whereas APOE2, a well-established longevity determinant, affords protection against the disease (7, 8).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > INTRODUCTION
What the sources say
- Not checked — no full text of the sourcecites [1] Bertram L, Tanzi RE, Thirty years of Alzheimer’s disease genetics: the implications of systematic meta-analyses. Nature reviews. Neuroscience 9, 768– 778 (2008). 18802446 source
- Not checked — no full text of the sourcecites [5] Corder EH, Saunders AM, Strittmatter WJ, Schmechel DE, Gaskell PC, Small GW, Roses AD, Haines JL, Pericak-Vance MA, Gene dose of apolipoprotein E type 4 allele and the risk of Alzheimer’s disease in late onset families. Science 261, 921– 923 (1993). 8346443 source
- Partly supportedcites [6] Tsuang D, Leverenz JB, Lopez OL, Hamilton RL, Bennett DA, Schneider JA, Buchman AS, Larson EB, Crane PK, Kaye JA, Kramer P, Woltjer R, Trojanowski JQ, Weintraub D, Chen-Plotkin AS, Irwin DJ, Rick J, Schellenberg GD, Watson GS, Kukull W, Nelson PT, Jicha GA, Neltner JH, Galasko D, Masliah E, Quinn JF, Chung KA, Yearout D, Mata IF, Wan JY, Edwards KL, Montine TJ, Zabetian CP, APOE epsilon4 increases risk for dementia in pure synucleinopathies. JAMA Neurol 70, 223– 228 (2013). 23407718 PMC3580799 sourceExperimental — accuracy not yet measured
The Abstract Results report strong associations of APOE ε4 with Alzheimer’s disease and pure dementia with Lewy bodies, and the Conclusions call it a strong risk factor across the Lewy body disease spectrum. The paper does not establish that it is *the major* genetic risk factor for either disease relative to other genetic factors. (LLM, conf=0.83)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“To date, this rare APOE3-Jac variant (0.12%) occurs on the APOE3 backbone and confers a reduced risk of AD (OR = 0.10, 0.03 to 0.45) equal to or superior to the APOE2 allele (OR = 0.46, 0.38 to 0.54).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant is associated with healthy brain aging, reduced insoluble apoE and decreased AD pathology
What the sources say
- Partly supportedcites [10] Medway CW, Abdul-Hay S, Mims T, Ma L, Bisceglio G, Zou F, Pankratz S, Sando SB, Aasly JO, Barcikowska M, Siuda J, Wszolek ZK, Ross OA, Carrasquillo M, Dickson DW, Graff-Radford N, Petersen RC, Ertekin-Taner N, Morgan K, Bu G, Younkin SG, ApoE variant p.V236E is associated with markedly reduced risk of Alzheimer’s disease. Mol Neurodegener 9, 11 (2014). 24607147 PMC3995879 sourceExperimental — accuracy not yet measured
The Introduction reports a 0.12% frequency for p.V236E in European Americans, and the Results place it on the APOE ε3 backbone and report reduced late-onset AD risk (OR 0.10, 0.03–0.45). The Discussion says the resulting ε3b allele reduced risk as much as or more than ε2 in this series. The claim omits those population and study qualifiers, and it pairs the p.V236E estimate from Fisher’s exact test with the ε2 estimate from multivariate regression; the latter analysis gives ε3b a different confidence interval (0.02–0.35). (LLM, conf=0.85)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Partly supported
Every source the paper cites for this claim was checked and supports it.
In the paper
“Additionally, recent genetic studies have also demonstrated a robust association between the APOE4 allele and risk of DLB (6, 12), the second leading cause of dementia in the elderly.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant is associated with healthy brain aging, reduced insoluble apoE and decreased AD pathology
What the sources say
- Supportedcites [6] Tsuang D, Leverenz JB, Lopez OL, Hamilton RL, Bennett DA, Schneider JA, Buchman AS, Larson EB, Crane PK, Kaye JA, Kramer P, Woltjer R, Trojanowski JQ, Weintraub D, Chen-Plotkin AS, Irwin DJ, Rick J, Schellenberg GD, Watson GS, Kukull W, Nelson PT, Jicha GA, Neltner JH, Galasko D, Masliah E, Quinn JF, Chung KA, Yearout D, Mata IF, Wan JY, Edwards KL, Montine TJ, Zabetian CP, APOE epsilon4 increases risk for dementia in pure synucleinopathies. JAMA Neurol 70, 223– 228 (2013). 23407718 PMC3580799 source
The Abstract Results report a strong association between APOE ε4 and pure dementia with Lewy bodies (pDLB), with an adjusted odds ratio of 6.1 (95% CI, 3.5–10.5). The Abstract Conclusions call ε4 a strong risk factor across the Lewy body disease spectrum. Page numbers are not provided in our copy. (LLM, conf=0.94)
- Supportedcites [12] Outeiro TF, Koss DJ, Erskine D, Walker L, Kurzawa-Akanbi M, Burn D, Donaghy P, Morris C, Taylor JP, Thomas A, Attems J, McKeith I, Dementia with Lewy bodies: an update and outlook. Mol Neurodegener 14, 5 (2019). 30665447 PMC6341685 source
The Genetics of DLB section calls APOE ε4 one of the strongest and most replicated genetic risk factors for DLB and says multiple studies associate it with increased DLB risk. It also reports that a recent genome-wide association study confirmed the APOE association. No page number is provided in our copy. (LLM, conf=0.94)
Strength:boosted· not yet calibratedCausal:correlational· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it.
- Supported
Every source the paper cites for this claim was checked and supports it.
In the paper
“ApoE, critical for brain cholesterol homeostasis and produced primarily by astrocytes, delivers cholesterol and essential lipids to neurons by interacting with members of the low-density lipoprotein receptor (LDLR) family (21).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant reduces self-association and increases lipidation
What the sources say
- Supportedcites [21] Bu G, Apolipoprotein E and its receptors in Alzheimer’s disease: pathways, pathogenesis and therapy. Nature reviews. Neuroscience 10, 333– 344 (2009). 19339974 PMC2908393 source
The Introduction states that apoE/lipoprotein particles are produced primarily by astrocytes and deliver cholesterol and other essential lipids to neurons via LDLR-family members. The section on brain cholesterol and lipid transport also describes this transport as apoE’s primary function in the brain; no page number is provided in our copy. (LLM, conf=0.95)
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one.
- Supported
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“Previous studies showed that apoE is co-deposited in senile plaques and plays a crucial role in fibrillar plaque formation (23, 24).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > ApoE3-Jac (V236E) variant reduces amyloid deposition, and plaque-related toxicity in amyloid model mice
What the sources say
- Not checked — no full text of the sourcecites [23] Bales KR, Verina T, Dodel RC, Du Y, Altstiel L, Bender M, Hyslop P, Johnstone EM, Little SP, Cummins DJ, Piccardo P, Ghetti B, Paul SM, Lack of apolipoprotein E dramatically reduces amyloid beta-peptide deposition. Nat Genet 17, 263– 264 (1997). 9354781 source
- Partly supportedcites [24] Ulrich JD, Ulland TK, Mahan TE, Nystrom S, Nilsson KP, Song WM, Zhou Y, Reinartz M, Choi S, Jiang H, Stewart FR, Anderson E, Wang Y, Colonna M, Holtzman DM, ApoE facilitates the microglial response to amyloid plaque pathology. J Exp Med 215, 1047– 1058 (2018). 29483128 PMC5881464 sourceExperimental — accuracy not yet measured
The ‘ApoE modifies Aβ deposition’ section reports that Apoe deficiency strongly reduced fibrillar amyloid burden, supporting an important role for apoE in fibrillar plaque formation. It also reports that fibrillar plaques remained detectable without apoE, and the passages do not establish that apoE is co-deposited in senile plaques. No page number is available in our copy. (LLM, conf=0.85)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesProbably not a substantial claim. It may state two separate claims as one.
The sources with a verdict support this claim; the rest weren’t checked yet, have no full text we could read, or their verdicts aren’t rated yet.
In the paper
“The ε4 allele of the apolipoprotein E (APOE) gene is the major genetic risk factor for AD and dementia with Lewy bodies (DLB) (1, 5, 6), whereas APOE2, a well-established longevity determinant, affords protection against the disease (7, 8).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > INTRODUCTION
What the sources say
- Not checked — no full text of the sourcecites [7] Schachter F, Faure-Delanef L, Guenot F, Rouger H, Froguel P, Lesueur-Ginot L, Cohen D, Genetic associations with human longevity at the APOE and ACE loci. Nat Genet 6, 29– 32 (1994). 8136829 source
- Supportedcites [8] Li Z, Shue F, Zhao N, Shinohara M, Bu G, APOE2: protective mechanism and therapeutic implications for Alzheimer’s disease. Mol Neurodegener 15, 63 (2020). 33148290 PMC7640652 source
The Background states that APOE*ε2 decreases Alzheimer’s disease risk compared with APOE*ε3 and explicitly describes its protective effect against AD. The section “APOE*ε2 protects against AD: the pathological evidence” also reports lower amyloid-plaque density in APOE*ε2 carriers. (LLM, conf=0.94)
Strength:boosted· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it.
The sources with a verdict support this claim; the rest weren’t checked yet, have no full text we could read, or their verdicts aren’t rated yet.
In the paper
“Neurodegenerative diseases, such as AD and DLB, are often characterized as diseases of protein aggregation (30–33).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Not checked — no full text of the sourcecites [30] Soto C, Unfolding the role of protein misfolding in neurodegenerative diseases. Nature reviews. Neuroscience 4, 49– 60 (2003). 12511861 source
- Not checked — no full text of the sourcecites [31] Ross CA, Poirier MA, Protein aggregation and neurodegenerative disease. Nat Med 10 Suppl, S10– 17 (2004). 15272267 source
- Supportedcites [32] DeTure MA, Dickson DW, The neuropathological diagnosis of Alzheimer’s disease. Mol Neurodegener 14, 32 (2019). 31375134 PMC6679484 source
The Abstract describes Alzheimer’s disease as a mixed proteinopathy involving amyloid and tau. The Background section on Lewy-related pathology describes dementia with Lewy bodies as involving pathological deposition of α-synuclein in Lewy bodies and neurites. Together, these passages support the characterization of both diseases as involving protein aggregation. (LLM, conf=0.91)
- Supportedcites [33] Twohig D, Nielsen HM, α-synuclein in the pathophysiology of Alzheimer’s disease. Mol Neurodegener 14, 23 (2019). 31186026 PMC6558879 source
The Background describes AD in terms of insoluble amyloid-β aggregates and tau tangles, and DLB in terms of Lewy bodies containing aggregated α-synuclein. These passages support the sentence’s characterization of both diseases as involving protein aggregation. (LLM, conf=0.92)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesProbably not a substantial claim.
The cited sources that could be checked couldn’t confirm or dispute this claim.
In the paper
“A recent case report found that an individual carrying two copies of the APOE3-Christchurch (R136S) mutation did not develop AD three decades after the expected disease onset (10).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Could not verifycites [10] Medway CW, Abdul-Hay S, Mims T, Ma L, Bisceglio G, Zou F, Pankratz S, Sando SB, Aasly JO, Barcikowska M, Siuda J, Wszolek ZK, Ross OA, Carrasquillo M, Dickson DW, Graff-Radford N, Petersen RC, Ertekin-Taner N, Morgan K, Bu G, Younkin SG, ApoE variant p.V236E is associated with markedly reduced risk of Alzheimer’s disease. Mol Neurodegener 9, 11 (2014). 24607147 PMC3995879 sourceExperimental — accuracy not yet measured
The Results discuss a different APOE variant, p.V236E, and report no homozygotes for it in the study sample. Searches for APOE3-Christchurch, R136S, and the claimed three-decade delay found no passage addressing that case report in our copy. (LLM, conf=0.78)
Strength:plain· not yet calibratedSingle caseTests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it.
- Could not verify
Every source the paper cites for this claim was checked and supports it.
In the paper
“Furthermore, previous studies showed that the lack of apoE expression impairs plaque-associated microgliosis (24).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > ApoE3-Jac (V236E) variant reduces amyloid deposition, and plaque-related toxicity in amyloid model mice
What the sources say
- Supportedcites [24] Ulrich JD, Ulland TK, Mahan TE, Nystrom S, Nilsson KP, Song WM, Zhou Y, Reinartz M, Choi S, Jiang H, Stewart FR, Anderson E, Wang Y, Colonna M, Holtzman DM, ApoE facilitates the microglial response to amyloid plaque pathology. J Exp Med 215, 1047– 1058 (2018). 29483128 PMC5881464 source
The Introduction reports significantly reduced plaque-associated microgliosis in Apoe-deficient mice. The Results section, “Decreased plaque-associated microgliosis,” specifies that fewer microglia clustered near amyloid plaques in two Apoe-deficient APP/PS1 mouse models. (LLM, conf=0.94)
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it.
- Supported
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“Brain is highly enriched in lipid contents; the deficits of lipids have been implicated in the pathophysiology of AD (37, 38).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Supportedcites [37] Di Paolo G, Kim TW, Linking lipids to Alzheimer’s disease: cholesterol and beyond. Nat Rev Neurosci 12, 284– 296 (2011). 21448224 PMC3321383 source
The section on inositol lipids and synaptic dysfunction reports reduced phosphoinositide levels in AD brain tissue and describes how depletion of PtdIns(4,5)P2 contributes to Aβ-related synaptic impairment. This supports the claim that lipid deficits have been implicated in AD pathophysiology, though the evidence concerns specific lipids rather than a general loss of all lipids. Page numbers are unavailable in our copy. (LLM, conf=0.88)
- Partly supportedcites [38] Kim HY, Huang BX, Spector AA, Phosphatidylserine in the brain: metabolism and function. Prog Lipid Res 56, 1– 18 (2014). 24992464 PMC4258547 sourceExperimental — accuracy not yet measured
Section 9 (Phosphatidylserine and cognitive function; page unavailable) reports reduced DHA content in phosphatidylserine in brain tissue from patients with Alzheimer’s disease. That supports a specific lipid change, but the authors say its contribution to pathogenesis is unknown and the proposed link remains open to question; the broader claim about lipid deficits in AD pathophysiology goes beyond the passage. (LLM, conf=0.84)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesProbably not a substantial claim.
- Supported
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“Importantly, apoE4 was shown to have greater tendency to aggregate and existed primarily as tetramers (28, 29), whereas apoE4-Jac variant consisted mostly dimers even when a high concentration of apoE (30 μM) was used (Fig. S10A).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > V236E substitution is capable of reducing apoE4 self-association and promoting cholesterol efflux
What the sources say
- Partly supportedcites [28] Garai K, Frieden C, The association-dissociation behavior of the ApoE proteins: kinetic and equilibrium studies. Biochemistry 49, 9533– 9541 (2010). 20923231 PMC3038193 sourceExperimental — accuracy not yet measured
The Discussion (Differences between the isoforms; page unavailable) reports that ApoE4 is predominantly tetrameric above 2.5 μM, supporting the tetramer portion of the cited clause. It finds only small differences in self-association among the isoforms and does not establish a greater tendency for ApoE4 to aggregate relative to ApoE4-Jac. The dimer finding for ApoE4-Jac is attributed to the citing paper’s own Fig. S10A, not to this source. (LLM, conf=0.84)
- Partly supportedcites [29] Chou CY, Lin YL, Huang YC, Sheu SY, Lin TH, Tsay HJ, Chang GG, Shiao MS, Structural variation in human apolipoprotein E3 and E4: secondary structure, tertiary structure, and size distribution. Biophys J 88, 455– 466 (2005). 15475580 PMC1305022 sourceExperimental — accuracy not yet measured
The Results section (‘Size distribution of full-length apoE3 and apoE4 proteins’; page unavailable) reports greater aggregation of apoE4 than apoE3. It describes several apoE4 species, however, and does not establish that full-length apoE4 existed primarily as tetramers. The apoE4-Jac dimer finding is attributed to the citing paper’s Fig. S10A, not to this source. (LLM, conf=0.86)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Partly supported
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“In addition, several studies have demonstrated that increasing apoE lipidation, either through genetic or pharmacological approaches, promotes Aβ clearance and improves cognitive performance in mice (27, 44, 45).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Partly supportedcites [27] Liu CC, Kanekiyo T, Xu H, Bu G, Apolipoprotein E and Alzheimer disease: risk, mechanisms and therapy. Nat Rev Neurol 9, 106– 118 (2013). 23296339 PMC3726719 sourceExperimental — accuracy not yet measured
The Aβ metabolism and aggregation section says LXR or RXR stimulation facilitates Aβ clearance, probably by increasing ApoE levels and lipidation. The Regulation of ApoE expression section reports improved cognition or memory after receptor-agonist treatment in amyloid mouse models. The paper does not establish that increased lipidation caused both benefits, and its genetic evidence concerns ABCA1 deficiency worsening clearance and memory deficits in ApoE4 mice, not a genetic approach that increases lipidation and improves performance. (LLM, conf=0.85)
- Partly supportedcites [44] Wahrle SE, Jiang H, Parsadanian M, Kim J, Li A, Knoten A, Jain S, Hirsch-Reinshagen V, Wellington CL, Bales KR, Paul SM, Holtzman DM, Overexpression of ABCA1 reduces amyloid deposition in the PDAPP mouse model of Alzheimer disease. J Clin Invest 118, 671– 682 (2008). 18202749 PMC2200302 sourceExperimental — accuracy not yet measured
The Discussion reports that genetic overexpression of ABCA1 increased apoE lipidation and reduced Aβ deposition in PDAPP mice. It describes increased Aβ clearance as a possibility for future testing, not an established result; it also proposes cognitive-performance studies rather than reporting improvement. The cited study does not establish the pharmacological part of the claim. (LLM, conf=0.89)
- Supportedcites [45] Cramer PE, Cirrito JR, Wesson DW, Lee CY, Karlo JC, Zinn AE, Casali BT, Restivo JL, Goebel WD, James MJ, Brunden KR, Wilson DA, Landreth GE, ApoE-directed therapeutics rapidly clear beta-amyloid and reverse deficits in AD mouse models. Science 335, 1503– 1506 (2012). 22323736 PMC3651582 source
The paper supplies the pharmacological example in this multi-citation sentence. Its treatment results (section labeled Abstract; page unavailable) report that bexarotene increased lipidated apoE and reduced Aβ in mouse models, while behavioral results report improved memory and cognition. (LLM, conf=0.91)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Partly supported
Every source the paper cites for this claim was checked and supports it.
In the paper
“Brain lipids transported by apoE/lipoprotein particles have been shown to play critical roles in neuronal membrane homeostasis and synaptic functions (21).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Supportedcites [21] Bu G, Apolipoprotein E and its receptors in Alzheimer’s disease: pathways, pathogenesis and therapy. Nature reviews. Neuroscience 10, 333– 344 (2009). 19339974 PMC2908393 source
In “ApoE and apoE receptors in brain cholesterol and lipid transport” (page not provided), the paper says apoE transports cholesterol from astrocytes to neurons, that cholesterol is essential to membranes and synaptic integrity, and that cholesterol carried by apoE/lipoprotein particles is essential for mature synapse formation in vitro. This supports the citing sentence’s paraphrase. (LLM, conf=0.93)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesProbably not a substantial claim.
- Supported
The sources with a verdict support this claim; the rest weren’t checked yet, have no full text we could read, or their verdicts aren’t rated yet.
In the paper
“As stated, APOE4 is the strongest genetic risk factor for late-onset AD (5, 27).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > Human AD brains with APOE4 genotype exhibit more aggregated apoE, the level of which correlates with increased Aβ aggregation
What the sources say
- Not checked — no full text of the sourcecites [5] Corder EH, Saunders AM, Strittmatter WJ, Schmechel DE, Gaskell PC, Small GW, Roses AD, Haines JL, Pericak-Vance MA, Gene dose of apolipoprotein E type 4 allele and the risk of Alzheimer’s disease in late onset families. Science 261, 921– 923 (1993). 8346443 source
- Supportedcites [27] Liu CC, Kanekiyo T, Xu H, Bu G, Apolipoprotein E and Alzheimer disease: risk, mechanisms and therapy. Nat Rev Neurol 9, 106– 118 (2013). 23296339 PMC3726719 source
The Introduction explicitly calls the APOE ε4 allele the strongest genetic risk factor for late-onset AD. The section “APOE ε4 as a strong risk factor for AD” also reports that genome-wide association studies identify it as the strongest genetic risk factor for AD. (LLM, conf=0.95)
Strength:plain· not yet calibratedCausal:correlational· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it.
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“Biochemical analysis showed a vastly reduced affinity of this apoE variant to heparin which has been implicated in multiple Aβ- and tau-related pathogenic pathways (34, 35).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Supportedcites [34] Holmes BB, DeVos SL, Kfoury N, Li M, Jacks R, Yanamandra K, Ouidja MO, Brodsky FM, Marasa J, Bagchi DP, Kotzbauer PT, Miller TM, Papy-Garcia D, Diamond MI, Heparan sulfate proteoglycans mediate internalization and propagation of specific proteopathic seeds. Proc Natl Acad Sci U S A 110, E3138– 3147 (2013). 23898162 PMC3746848 source
The citation is attached to the clause about heparin’s involvement in pathogenic pathways, not the preceding biochemical measurement of apoE-variant affinity. The Discussion (page unavailable) reports that heparin blocks tau aggregate binding, uptake, and propagation, supporting the tau-related part for which this paper is cited. (LLM, conf=0.87)
- Could not verifycites [35] Liu CC, Zhao N, Yamaguchi Y, Cirrito JR, Kanekiyo T, Holtzman DM, Bu G, Neuronal heparan sulfates promote amyloid pathology by modulating brain amyloid-beta clearance and aggregation in Alzheimer’s disease. Sci Transl Med 8, 332ra344 (2016). PMC5512541 27030596 sourceExperimental — accuracy not yet measured
The Discussion says apoE binds heparan sulfate proteoglycans, but it does not discuss the APOE3-Christchurch variant or report a biochemical comparison of its affinity for heparin. Searches for the variant and heparin-binding affinity found no passage addressing that result. The cited paper addresses the heparan-sulfate context of the sentence, not the stated affinity finding. (LLM, conf=0.76)
Strength:plain· not yet calibratedCausal:direct· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it.
- Supported
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“In addition, lipid-poor apoE has been suggested to have greater susceptibility to aggregation, which may impair Aβ clearance and promote Aβ deposition (22).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Partly supportedcites [22] Hu J, Liu CC, Chen XF, Zhang YW, Xu H, Bu G, Opposing effects of viral mediated brain expression of apolipoprotein E2 (apoE2) and apoE4 on apoE lipidation and Abeta metabolism in apoE4-targeted replacement mice. Mol Neurodegener 10, 6 (2015). 25871773 PMC4356137 sourceExperimental — accuracy not yet measured
The Discussion links possible apoE4 aggregation and poor lipidation to reduced Aβ clearance or increased Aβ deposition. It does not establish that lipid-poor apoE is more susceptible to self-aggregation; it suggests instead that apoE4 aggregation may impair lipidation. The Results discuss lipid-poor apoE promoting Aβ aggregation, which is a different point. (LLM, conf=0.84)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesProbably not a substantial claim. It may state two separate claims as one.
- Partly supported
Every source the paper cites for this claim was checked and supports it.
In the paper
“Decreases of major lipid species (i.e., PA, PC, PE, PS and sulfatide) were previously observed in AD APOE4 carriers (43).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
What the sources say
- Supportedcites [43] Lefterov I, Wolfe CM, Fitz NF, Nam KN, Letronne F, Biedrzycki RJ, Kofler J, Han X, Wang J, Schug J, Koldamova R, APOE2 orchestrated differences in transcriptomic and lipidomic profiles of postmortem AD brain. Alzheimers Res Ther 11, 113 (2019). 31888770 PMC6937981 source
The Results section reports that PA, PC, PE and ST were significantly lower in APOEε4-carrier AD brain samples than in at least one comparison genotype group. It also reports significantly diminished PS in APOEε4-carrier samples. The paper reports these as differences in postmortem inferior parietal lobule samples, rather than decreases measured over time. (LLM, conf=0.91)
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesProbably not a substantial claim.
- Supported
The cited sources support only part of this claim — read each source’s verdict below.
In the paper
“Recent transcriptomics studies identified sub-clusters of disease-associated microglia (DAM) across AD mouse models and human brains with APOE being one of the highly regulated genes (25).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > ApoE3-Jac (V236E) variant reduces amyloid deposition, and plaque-related toxicity in amyloid model mice
What the sources say
- Partly supportedcites [25] Keren-Shaul H, Spinrad A, Weiner A, Matcovitch-Natan O, Dvir-Szternfeld R, Ulland TK, David E, Baruch K, Lara-Astaiso D, Toth B, Itzkovitz S, Colonna M, Schwartz M, Amit I, A Unique Microglia Type Associated with Restricting Development of Alzheimer’s Disease. Cell 169, 1276– 1290 e1217 (2017). 28602351 sourceExperimental — accuracy not yet measured
The Results describe single-cell RNA sequencing in the 5XFAD mouse model and identify distinct disease-associated microglia groups; the Introduction reports Apoe upregulation during DAM activation. The paper also finds DAM markers in human AD brain tissue, but through staining rather than transcriptomic identification of human DAM sub-clusters. The claim therefore extends the transcriptomics finding beyond the population studied. (LLM, conf=0.88)
Strength:plain· not yet calibratedCausal:correlational· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one.
- Partly supported
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Herein, we resolve the functional mechanism in which apoE3-Jac reduces apoE aggregation and enhances its lipidation in human brains, as well as in cellular and biochemical assays.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > Abstract
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Importantly, the V236E substitution was not observed in any of the DLB patients but was observed in three control subjects (3/975; carrier frequency 0.3%; P=0.11) (Table 1), which although not statistically significant, further supports a protective effect.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant is associated with healthy brain aging, reduced insoluble apoE and decreased AD pathology
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Importantly, mice expressing apoE3-Jac have a reduced amyloid pathology, plaque-associated immune responses, and neuritic dystrophy.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > Abstract
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Interestingly, brain tissues from APOE3-Jac carriers exhibited vastly reduced insoluble apoE, as well as increased ratios of soluble/insoluble apoE (Fig. 1D, E), suggesting that this apoE variant reduces its propensity for aggregation.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant is associated with healthy brain aging, reduced insoluble apoE and decreased AD pathology
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“In addition, soluble Aβ42 levels and both insoluble Aβ40 and Aβ42 levels were lower in the brains of APOE3-Jac carriers (Fig. 1F, G; Fig. S1A).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant is associated with healthy brain aging, reduced insoluble apoE and decreased AD pathology
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Significantly, we identified an additional APOE3-Jac carrier in each series giving an overall carrier frequency of 2.0% in our exceptional-aging subjects compared to our control series and previous studies (Table 1).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant is associated with healthy brain aging, reduced insoluble apoE and decreased AD pathology
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
The paper states this without a source or data behind it here, so there is nothing to check it against. The quote shows it is in the paper.
In the paper
“The APOE3-Jac variant is localized adjacent to the lipid-binding region and within a region implicated in apoE oligomerization (Fig. 2A).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant reduces self-association and increases lipidation
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Interestingly, we observed a positive correlation between the levels of apoE and Aβ40, as well as between the levels of apoE and Aβ42 in the detergent-insoluble fraction (Fig. S5B), suggesting that the aggregated apoE contributes to Aβ pathology.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > ApoE3-Jac (V236E) variant reduces amyloid deposition, and plaque-related toxicity in amyloid model mice
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“The expression level of apoE3-Jac variant was similar to that of apoE3 in the brain although a decreasing trend of apoE3-Jac in the detergent-insoluble fractions was observed (Fig. S5A).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > ApoE3-Jac (V236E) variant reduces amyloid deposition, and plaque-related toxicity in amyloid model mice
Strength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Importantly, our in vivo results support an association between amyloid plaque-associated apoE, plaque load, and related toxicity, whereas the presence of apoE3-Jac significantly ameliorated these effects.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > INTRODUCTION
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Rests on an assumption: The 5xFAD mouse model’s amyloid pathology and plaque-associated toxicity are relevant to human Alzheimer’s disease.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Furthermore, immunohistochemical evaluation identified typical cored Aβ plaques in the brains of APOE3 individuals, whereas brains with APOE3-Jac variant had either a few diffused, amorphous Aβ deposits or were absent for any plaque pathology (Fig. 1H; Fig. S1B).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant is associated with healthy brain aging, reduced insoluble apoE and decreased AD pathology
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“We identify an apolipoprotein E3 variant (APOE3-V236E), named apoE3-Jacksonville (apoE3-Jac), that is associated with healthy brain aging and reduced risk for Alzheimer’s disease (AD) and dementia with Lewy bodies (DLB).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > Abstract
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Cross-linking analysis further demonstrated that apoE4 existed primarily as aggregates, while apoE4-Jac was mostly monomeric (Fig. 4B–C).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > V236E substitution is capable of reducing apoE4 self-association and promoting cholesterol efflux
Load-bearingStrength:boosted· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“In addition, apoE4-Jac exhibited a lower affinity to heparin and showed reduced aggregation upon cross-linking (Fig. 4D–F).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > V236E substitution is capable of reducing apoE4 self-association and promoting cholesterol efflux
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Intriguingly, mice expressing apoE3-Jac variant exhibited a significant reduction in microglial clustering around Aβ plaques (Fig. 3E) and Thio S-positive fibrillar plaques (Fig. S5E) compared with those expressing apoE3.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > ApoE3-Jac (V236E) variant reduces amyloid deposition, and plaque-related toxicity in amyloid model mice
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Rests on an assumption: The 5xFAD mouse model’s amyloid pathology and plaque-associated toxicity are relevant to human Alzheimer’s disease.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“The ratios of insoluble to soluble apoE were highest in patients homozygous for APOE4 and lowest in APOE4 non-carriers (Fig. S9B, C).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > Human AD brains with APOE4 genotype exhibit more aggregated apoE, the level of which correlates with increased Aβ aggregation
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Behavioral analysis demonstrated that FAD/apoE3-Jac mice had a trend of improved cognitive function compared to FAD/apoE3 mice without influencing anxiety-related behaviors (Fig. S8).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > ApoE3-Jac (V236E) variant reduces amyloid deposition, and plaque-related toxicity in amyloid model mice
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Rests on an assumption: The 5xFAD mouse model’s amyloid pathology and plaque-associated toxicity are relevant to human Alzheimer’s disease.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Importantly, we showed that apoE levels were increased in detergent-insoluble formic acid (FA) fractions but decreased in TBS-soluble fractions, in an APOE4 gene dose-dependent manner (Fig. S9A).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > Human AD brains with APOE4 genotype exhibit more aggregated apoE, the level of which correlates with increased Aβ aggregation
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“In contrast to apoE4, which existed primarily as oligomers, a major monomeric peak and a minor oligomeric shoulder were detected for apoE4-Jac (Fig. 4A).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > V236E substitution is capable of reducing apoE4 self-association and promoting cholesterol efflux
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Though the protective APOE3-Jac variant was found to reside in the APOE3 backbone in the carriers, our study demonstrated that V236E substitution is also sufficient to reduce apoE4 aggregation and increase cholesterol efflux.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A result the paper reports from its own data — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Furthermore, regression analysis showed that plaque-associated apoE positively correlated with amyloid plaque burden and the numbers of microglia surrounding plaques (Fig. 3F, G).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > ApoE3-Jac (V236E) variant reduces amyloid deposition, and plaque-related toxicity in amyloid model mice
Strength:plain· not yet calibratedCausal:correlational· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes? Load-bearing: unclear✓ Based: passesIt may state two separate claims as one.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“These results are consistent with the notion that apoE self-aggregation might facilitate Aβ aggregation and deposition, signifying that reduced apoE aggregation in APOE3-Jac carriers might be a critical mechanism for its protective role against the development of AD.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > APOE3-Jac (V236E) variant is associated with healthy brain aging, reduced insoluble apoE and decreased AD pathology
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Our findings have vital implications for the role of apoE aggregation in the pathogenesis of AD and DLB, and provide insights into the development of a therapeutic strategy targeting apoE aggregation in dementia.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > INTRODUCTION
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Rests on an assumption: The functional effects of apoE3-Jac observed in cellular and mouse models explain its protective association against Alzheimer’s disease and dementia with Lewy bodies in humans.
- Rests on an assumption: Reducing apoE self-aggregation is a viable therapeutic strategy for Alzheimer’s disease and dementia with Lewy bodies.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“By performing human genetic and pathological analyses, and functional assays in cellular and animal models, we demonstrate that the apoE3-Jac promotes healthy brain aging and decreases amyloid deposition by reducing apoE self-association and increasing lipidation.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > INTRODUCTION
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Rests on an assumption: The functional effects of apoE3-Jac observed in cellular and mouse models explain its protective association against Alzheimer’s disease and dementia with Lewy bodies in humans.
What the paper did — it cites no source for this, so there is none to check. The quote shows it is in the paper.
In the paper
“Because the amyloid plaque level was undetectable in the other two APOE3-Jac human brains, we could not perform quantitative analysis.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
Tests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“This result suggests that the plaque-associated apoE3, but not apoE3-Jac variant, facilitates amyloid deposition and associated neurotoxicity.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > ApoE3-Jac (V236E) variant reduces amyloid deposition, and plaque-related toxicity in amyloid model mice
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Thus, learning from nature, compounds targeting apoE self-aggregation might reproduce the protective effects of the APOE-Jac variant.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesProbably not a substantial claim.
- Rests on an assumption: Reducing apoE self-aggregation is a viable therapeutic strategy for Alzheimer’s disease and dementia with Lewy bodies.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“In summary, apoE3-Jac represents one of the critical apoE variants that gain a functional advantage over the common isoforms, conferring protection against AD and DLB, by promoting dementia-free prosperous brain aging.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Rests on an assumption: Exceptional aging (≥85 years, cognitively normal, minimal AD pathology) is enriched for protective genetic variants such as APOE3-Jac.
What the paper did — it cites no source for this, so there is none to check. The quote shows it is in the paper.
In the paper
“The introduced mutations were confirmed by DNA sequencing.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > MATERIALS AND METHODS > Site-Directed Mutagenesis
Load-bearingStrength:plain· not yet calibratedTests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesProbably not a substantial claim.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“In summary, our study uncovers a potential pathogenic mechanism of aggregated apoE as well as the plaque-associated microglial responses and neurotoxicity, supporting that pharmacological targeting of apoE aggregation should be explored as a therapeutic strategy for AD and related dementias.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Rests on an assumption: The 5xFAD amyloid mouse model with apoE3-Jac expression recapitulates key aspects of human AD amyloid pathology and apoE biology relevant to dementia.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“This large population-based study further supports the protective nature of APOE3-Jac against general dementia and promotion of healthy aging.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Our in vivo study demonstrates that expression of apoE3-Jac in an amyloid mouse model decreases the association of apoE with amyloid plaques, which may in turn reduce amyloid deposition as well as plaque-associated microgliosis and resultant neuronal toxicity.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Rests on an assumption: The 5xFAD amyloid mouse model with apoE3-Jac expression recapitulates key aspects of human AD amyloid pathology and apoE biology relevant to dementia.
In the paper
“Increased plaque-associated neuritic dystrophy, induced by deposits of fibrillar Aβ, has been shown to contribute to cognitive decline over the clinical course of AD (26).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > RESULTS > ApoE3-Jac (V236E) variant reduces amyloid deposition, and plaque-related toxicity in amyloid model mice
What the sources say
- Not checked — no full text of the sourcecites [26] Serrano-Pozo A, Betensky RA, Frosch MP, Hyman BT, Plaque-Associated Local Toxicity Increases over the Clinical Course of Alzheimer Disease. Am J Pathol 186, 375– 384 (2016). 26687817 PMC4729270 source
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesProbably not a substantial claim.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“Our study demonstrates that apoE3-Jac protects against AD and related dementia, and promotes healthy brain aging by reducing its self-aggregation, leading to decreased amyloid plaques and related toxicity, as well as enhanced lipidation.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
Tests✓ Asserted: passes✓ Checkable: passes✓ Load-bearing: passes✓ Based: passesIt may state two separate claims as one.
- Rests on an assumption: The functional effects of apoE3-Jac observed in cellular and mouse models explain its protective association against Alzheimer’s disease and dementia with Lewy bodies in humans.
A conclusion the paper draws from its own results — it cites no other source for it, so there is none to check. The quote shows it is in the paper.
In the paper
“The identification of protective factors that occur normally in the population provides direct insight into the pathophysiology of the disease and can nominate novel therapeutic avenues.”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > DISCUSSION
Tests✓ Asserted: passes✗ Checkable: fails✓ Load-bearing: passes✗ Based: failsProbably not a substantial claim. It may be too vague to check against evidence. The paper may give no reason why it holds. It may state two separate claims as one.
- Rests on an assumption: Reducing apoE self-aggregation is a viable therapeutic strategy for Alzheimer’s disease and dementia with Lewy bodies.
What the paper did — it cites no source for this, so there is none to check. The quote shows it is in the paper.
In the paper
“Average age of the subjects was 90.13 ± 2.8 years and was not significantly different between the two groups (p = 0.90).”
§ APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia: Implications for therapeutic strategy > MATERIALS AND METHODS > Subjects
Strength:plain· not yet calibratedn = 8Tests✓ Asserted: passes✓ Checkable: passes✗ Load-bearing: fails✓ Based: passesProbably not a substantial claim. The paper’s conclusions may not depend on it. It may state two separate claims as one. The quote only partly states this claim.
The paper relies on this without support.
The mechanism by which APOE3-Jac protects against Alzheimer’s disease risk remains unclear.
“The variant was found to be associated with markedly reduced risk of AD; however, the mechanism by which this variant protects against AD risk remains unclear.”
The paper relies on this without support.
The functional effects of apoE3-Jac observed in cellular and mouse models explain its protective association against Alzheimer’s disease and dementia with Lewy bodies in humans.
“Our study demonstrates that apoE3-Jac protects against AD and related dementia, and promotes healthy brain aging by reducing its self-aggregation, leading to decreased amyloid plaques and related toxicity, as well as enhanced lipidation.”
The paper relies on this without support.
Reducing apoE self-aggregation is a viable therapeutic strategy for Alzheimer’s disease and dementia with Lewy bodies.
“These findings have major implications on how apoE aggregation contributes to disease pathogenesis and nominate a drug targeting strategy by reducing apoE aggregation.”
The paper relies on this without support.
The 5xFAD mouse model’s amyloid pathology and plaque-associated toxicity are relevant to human Alzheimer’s disease.
“To investigate whether apoE3-Jac variant affects amyloid pathogenesis in vivo, we also established 5xFAD amyloid model mice expressing apoE3 or apoE3-Jac via AAV-mediated gene delivery.”
The paper relies on this without support.
Exceptional aging (≥85 years, cognitively normal, minimal AD pathology) is enriched for protective genetic variants such as APOE3-Jac.
“Neuropathologically-defined exceptional-aging brains (≥ 85 years) were obtained from the Mayo Clinic Brain Bank. Individuals who did not have neurodegenerative disease diagnosis (e.g. AD, DLB, frontotemporal lobar degeneration), were cognitively normal prior to autopsy, and had available frozen tissue, were selected.”
The paper relies on this without support.
The 5xFAD amyloid mouse model with apoE3-Jac expression recapitulates key aspects of human AD amyloid pathology and apoE biology relevant to dementia.
“Our in vivo study demonstrates that expression of apoE3-Jac in an amyloid mouse model decreases the association of apoE with amyloid plaques, which may in turn reduce amyloid deposition as well as plaque-associated microgliosis and resultant neuronal toxicity.”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“The discovery of the protective roles of Christchurch (R136S) in autosomal dominant PSEN1 familial AD and the Jacksonville (V236E), & R251G mutations that are protective against sporadic AD [17–20].”
From Discovery of a Missense Mutation (Q222K) of the APOE Gene from the Australian Imaging, Biomarker and Lifestyle Study (2023) · cites this paper as [19]
Experimental — accuracy not yet measuredThe source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“Although ApoE is not detected in appreciable quantities in its apo form in physiological fluids, to date all reports describing the biochemical properties of this recombinant protein have deployed lipid-free biosynthetic materials.21–25”
From ApoE is Secreted as a Lipid Nanoparticle by Mammalian Cells: Implications for Alzheimer’s Disease Pathogenesis (2025) · cites this paper as [23]
Experimental — accuracy not yet measuredThe source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“Intriguingly, the protective APOE Jacksonville mutation (Fig. 1) has been found to reduce APOE oligomerization and Aβ deposition, which could point to APOE oligomerization being biologically detrimental and adds weight to the hypothesis that APOE oligomerization might facilitate Aβ oligomerization44.”
From Multifaceted roles of APOE in Alzheimer disease (2024) · cites this paper as [44]
Experimental — accuracy not yet measuredThe source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“The APOE3-backbone Jacksonville variant (V236E), located in the C-terminal coiled-coil interface, reduces ApoE self-aggregation and enhances lipidation, and carriers have AD risk equivalent to APOE-ε2 homozygotes (15,19).”
From APOE Isoform-Dependent Self-Association Measured by a Split-Luciferase Complementation Assay: Differential Effects of Disease-Risk and Protective Variants (2026) · cites this paper as [15]
Experimental — accuracy not yet measuredThe source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“The Jacksonville variant (V236E) reduced signal below ApoE3 levels in this assay, consistent with the mechanistic studies of Liu et al. (2021) (15), who demonstrated that V236E reduces ApoE aggregation and enhances lipidation in astrocyte-conditioned medium and human brain tissue.”
From APOE Isoform-Dependent Self-Association Measured by a Split-Luciferase Complementation Assay: Differential Effects of Disease-Risk and Protective Variants (2026) · cites this paper as [15]
Experimental — accuracy not yet measured
The source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“The Christchurch variant rs121918393 (APOEChc: CGC > aGC, p.Arg[R]136Ser[S]) [19–21] and the Jacksonville variant rs199768005 (APOEJax: GTG > GaG, p.Val[V]236Glu[E]) [22, 23] have been identified as protective variants against AD in Caucasians”
From Genetics of Alzheimer’s disease: An East Asian perspective (2023) · cites this paper as [23]
Experimental — accuracy not yet measuredThe cited source says what the claim attributes to it.
In the citing paper
“ApoE3-Christchurch and ApoE3-Jacksonville have both been shown to be protective when compared with ApoE3 [35][36][37]”
From Utilizing a cell culture based novel cellular thermal shift assay to understand the isoform-dependent thermal stability of ApoE variants (2026) · cites this paper as [36]
The cited source says what the claim attributes to it.
In the citing paper
“This corresponded to a similarly significant reduction in the width of the slope, which could be due to the reduced propensity of ApoE3-Jacksonville to dimerize or oligomerize 36 (Figure 3E)[ F (5, 35) = 7.419 (Dunnets ApoE3 vs ApoE3_Jacksonville p=0.0142,ApoE3 vs ApoE4 p=0.0056).”
From Utilizing a cell culture based novel cellular thermal shift assay to understand the isoform-dependent thermal stability of ApoE variants (2026) · cites this paper as [36]
The cited source says what the claim attributes to it.
In the citing paper
“This includes the important discoveries about rare APOE missense variants that impact protein function and modify disease risk.”
From Discovery of a Missense Mutation (Q222K) of the APOE Gene from the Australian Imaging, Biomarker and Lifestyle Study (2023) · cites this paper as [19]
The cited source says what the claim attributes to it.
In the citing paper
“In prior work 14 , the Jacksonville variant V236E was shown to reduce ApoE self-aggregation, providing a plausible biochemical basis for protection.”
From Association of Rare APOE Missense Variants R189C and W276C With Risk of Alzheimer Disease (2026) · cites this paper as [14]
The cited source says what the claim attributes to it.
In the citing paper
“This mutation has been associated with a reduction in fibrillar Aβ plaque by amyloid PET and neuropathological examination44.”
From Multifaceted roles of APOE in Alzheimer disease (2024) · cites this paper as [44]
The cited source says what the claim attributes to it.
In the citing paper
“The APOE3-backbone Jacksonville variant (V236E), located in the C-terminal coiled-coil interface, reduces ApoE self-aggregation and enhances lipidation, and carriers have AD risk equivalent to APOE-ε2 homozygotes (15,19).”
From APOE Isoform-Dependent Self-Association Measured by a Split-Luciferase Complementation Assay: Differential Effects of Disease-Risk and Protective Variants (2026) · cites this paper as [15]
The cited source says what the claim attributes to it.
In the citing paper
“Among the APOE ε3-backbone variants, Jacksonville (V236E) and W276C both reduce selfassociation below ApoE3 levels, which highlights their location within the C-terminal domain which has previously been shown to be important for ApoE oligomerization (8,15,19,20).”
From APOE Isoform-Dependent Self-Association Measured by a Split-Luciferase Complementation Assay: Differential Effects of Disease-Risk and Protective Variants (2026) · cites this paper as [15]
The cited source says what the claim attributes to it.
In the citing paper
“On the other hand, APOEJac was found to show an anti-Aβ effect [23]”
From Genetics of Alzheimer’s disease: An East Asian perspective (2023) · cites this paper as [23]
The cited source says what the claim attributes to it.
In the citing paper
“Additionally, biochemical analysis showed that APOEJax variant inhibited self-aggregation of ApoE, which may in turn inhibit the accumulation of Aβ.”
From Genetics of Alzheimer’s disease: An East Asian perspective (2023) · cites this paper as [23]
The check wasn’t confident either way, so it gives no verdict — never disputed.
In the citing paper
“Mammalian expression systems retain physiologically relevant secretory, folding and post-translational modification mechanisms, but column-purified recombinant ApoE is invariably prepared as apoprotein.22–25”
From ApoE is Secreted as a Lipid Nanoparticle by Mammalian Cells: Implications for Alzheimer’s Disease Pathogenesis (2025) · cites this paper as [23]
Experimental — accuracy not yet measuredThe check wasn’t confident either way, so it gives no verdict — never disputed.
In the citing paper
“Mammalian expression systems retain physiologically relevant secretory, folding and post-translational modification mechanisms, but column-purified recombinant ApoE is invariably prepared as apoprotein.22–25”
From ApoE is Secreted as a Lipid Nanoparticle by Mammalian Cells: Implications for Alzheimer’s Disease Pathogenesis (2025) · cites this paper as [23]
Experimental — accuracy not yet measuredThe check wasn’t confident either way, so it gives no verdict — never disputed.
In the citing paper
“Although ApoE is not detected in appreciable quantities in its apo form in physiological fluids, to date all reports describing the biochemical properties of this recombinant protein have deployed lipid-free biosynthetic materials.21–25”
From ApoE is Secreted as a Lipid Nanoparticle by Mammalian Cells: Implications for Alzheimer’s Disease Pathogenesis (2025) · cites this paper as [23]
Experimental — accuracy not yet measuredThe check wasn’t confident either way, so it gives no verdict — never disputed.
In the citing paper
“Third, the HEK293 expression system does not fully recapitulate the lipidation state or post-translational modifications of ApoE in primary astrocytes or neurons”
From APOE Isoform-Dependent Self-Association Measured by a Split-Luciferase Complementation Assay: Differential Effects of Disease-Risk and Protective Variants (2026) · cites this paper as [15]
Experimental — accuracy not yet measured
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Berríos, W., Golimstok, Á., & Fernandez, M. C. (2026) · Frontiers in Neurology · doi:10.3389/fneur.2026.1825397
APOE Gene Editing as a Therapeutic Target Toward Precision Medicine in AD
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The Role of ApoE Genetics in Glial Lipid Metabolism and Inflammation
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Metadata
- Authors
- Liu, C.-C., Murray, M. E., Li, X., Zhao, N., Wang, N., Heckman, M. G., Shue, F., Martens, Y., Li, Y., Raulin, A.-C., Rosenberg, C. L., Doss, S. V., Zhao, J., Wren, M. C., Jia, L., Ren, Y., Ikezu, T. C., Lu, W., Fu, Y., Caulfield, T., Trottier, Z. A., Knight, J., Chen, Y., Linares, C., Wang, X., Kurti, A., Asmann, Y. W., Wszolek, Z. K., Smith, G. E., Vemuri, P., Kantarci, K., Knopman, D. S., Lowe, V. J., Jack, C. R., Parisi, J. E., Ferman, T. J., Boeve, B. F., Graff-Radford, N. R., Petersen, R. C., Younkin, S. G., Fryer, J. D., Wang, H., Han, X., Frieden, C., Dickson, D. W., Ross, O. A., & Bu, G.
- Affiliations
- Mayo Clinic (US)
- Department of Neuroscience, Mayo Clinic, Jacksonville, FL 32224, USA.
- Department of Neurology, Mayo Clinic, Jacksonville, FL 32224, USA.
- Mayo Clinic in Arizona (US)
- Barshop Institute for Longevity and Aging Studies, San Antonio, TX 78229, USA.
- The University of Texas at San Antonio Health Science Center (US)
- Washington University in St. Louis (US)
- Corresponding author
- Liu, Chia-Chen
- Murray, Melissa E.
- Li, Xia
- Zhao, Na
- Bu, Guojun
- ORCID
- Liu, Chia-Chen
- Murray, Melissa E.
- Li, Xia
- Zhao, Na
- Wang, Na
- Heckman, Michael G.
- Shue, Francis
- Martens, Yuka
- Li, Yonghe
- Raulin, Ana-Caroline
- Rosenberg, Cassandra L.
- Doss, Sydney V.
- Zhao, Jing
- Wren, Melissa C.
- Jia, Lin
- Ren, Yingxue
- Ikezu, Tadafumi C.
- Fu, Yuan
- Caulfield, Thomas
- Trottier, Zachary A.
- Knight, Joshua
- Chen, Yixing
- Linares, Cynthia
- Wang, Xue
- Asmann, Yan W.
- Wszolek, Zbigniew K.
- Smith, Glenn E.
- Vemuri, Prashanthi
- Kantarci, Kejal
- Knopman, David S.
- Lowe, Val J.
- Jack, Clifford R.
- Ferman, Tanis J.
- Boeve, Bradley F.
- Petersen, Ronald C.
- Younkin, Steven G.
- Fryer, John D.
- Wang, Hu
- Han, Xianlin
- Frieden, Carl
- Dickson, Dennis W.
- Ross, Owen A.
- Bu, Guojun
- Venue
- Science Translational Medicine
- Published
- 2021-09-29
- Volume
- 13
- Issue
- 613
- Pages
- eabc9375-eabc9375
- ISSN
- 1946-6234 (ISSN-L)
- 1946-6242
- PMC
- PMC8824726
- OpenAlex
- W3204399059
- Semantic Scholar
- 0da164abd795acc3c865860a4177379acbd32506
- Cited by
- 108
- References
- 70
- Citations by year
- 2026: 16 · 2025: 24 · 2024: 22 · 2023: 16 · 2022: 29 · 2021: 1
- FWCI
- 10.68
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Science Translational Medicine (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Rare & Special e-Zone (The Hong Kong University of Science and Technology) (submittedVersion)
- Funders
- National Institutes of Health (1rf1ag062110-01, 1rf1ag061872-01)
- National Institute on Aging (R01AG015866, R01AG027924, R37AG027924, RF1-AG061872, U01AG052409, U01AG006786, RF1AG057181, R01AG054449, R01AG021010, R01AG011378, RF1 AG062110, RF1AG046205, R01AG041851, P30AG062677, U19AG069701, P30AG066546)
- National Institute of Neurological Disorders and Stroke (R01NS076471, R01NS078086, U54NS110435, P50NS072187, U01NS100620, P01NS074969)
- Topics
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Alzheimer's disease research and treatments
- Health Sciences › Medicine › Psychiatry and Mental health › Dementia and Cognitive Impairment Research
- Life Sciences › Neuroscience › Neurology › Neuroinflammation and Neurodegeneration Mechanisms
- Keywords
- Alzheimer's disease, dementia with Lewy bodies, APOE ε4, amyloid plaques, astrocytes, brain lipids, phosphatidylserine, phosphatidylethanolamine, phosphatidic acid, sulfatide, synaptic function, neuritic dystrophy, amyloid pathology, brain aging
- MeSH terms
- Apolipoproteins E, Dementia, Humans, Apolipoprotein E3
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
A language model drew the claims from the paper on 2026-10-31, under version 3 of the claim definition (model deepseek-v4.1-flash, prompt extract-v3).
A second model labelled each claim on 2026-10-31 (model jev-1.13-20260917, definition revision gold-guideline-v0.2).
Cited sources are checked with a language model’s help (gpt-6-sol).
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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