Whole food-based approaches to modulating gut microbiota and associated diseases

An obesity-associated gut microbiome with increased capacity for energy harvest

Turnbaugh, P. J., Ley, R. E., Mahowald, M. A., Magrini, V., Mardis, E. R., & Gordon, J. I. (2006) · Nature · doi:10.1038/nature05414 · Cited by 12,444

Human gut microbes associated with obesity

Ley, R. E., Turnbaugh, P. J., Klein, S., & Gordon, J. I. (2006) · Nature · doi:10.1038/4441022a · Cited by 8,785

The gut microbiota as an environmental factor that regulates fat storage

Bäckhed, F., Ding, H., Wang, T., Hooper, L. V., Koh, G. Y., Nagy, A., Semenkovich, C. F., & Gordon, J. I. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0407076101 · Cited by 6,245

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

De Filippo, C., Cavalieri, D., Di Paola, M., Ramazzotti, M., Poullet, J. B., Massart, S., Collini, S., Pieraccini, G., & Lionetti, P. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1005963107 · Cited by 5,579

Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells

Furusawa, Y., Obata, Y., Fukuda, S., Endo, T. A., Nakato, G., Takahashi, D., Nakanishi, Y., Uetake, C., Kato, K., Kato, T., et al. (2013) · Nature · doi:10.1038/nature12721 · Cited by 5,549

Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity

Everard, A., Belzer, C., Geurts, L., Ouwerkerk, J. P., Druart, C., Bindels, L. B., Guiot, Y., Derrien, M., Muccioli, G. G., Delzenne, N. M., et al. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1219451110 · Cited by 4,511

Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients

Sokol, H., Pigneur, B., Watterlot, L., Lakhdari, O., Bermúdez-Humarán, L. G., Gratadoux, J.-J., Blugeon, S., Bridonneau, C., Furet, J.-P., Corthier, G., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0804812105 · Cited by 4,413

Introduction to the human gut microbiota

Thursby, E., & Juge, N. (2017) · Biochemical Journal · doi:10.1042/bcj20160510 · Cited by 3,600

A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility

Desai, M. S., Seekatz, A. M., Koropatkin, N. M., Kamada, N., Hickey, C. A., Wolter, M., Pudlo, N. A., Kitamoto, S., Terrapon, N., Muller, A., et al. (2016) · Cell · doi:10.1016/j.cell.2016.10.043 · Cited by 2,805

Mechanisms underlying the resistance to diet-induced obesity in germ-free mice

Bäckhed, F., Manchester, J. K., Semenkovich, C. F., & Gordon, J. I. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0605374104 · Cited by 2,615

Dietary (poly)phenolics in human health: structures, bioavailability, and evidence of protective effects against chronic diseases

Del Rio, D., Rodriguez-Mateos, A., Spencer, J. P. E., Tognolini, M., Borges, G., & Crozier, A. (2013) · Antioxidants & Redox Signaling · doi:10.1089/ars.2012.4581 · Cited by 2,601

Microbiota and SCFA in lean and overweight healthy subjects

Schwiertz, A., Taras, D., Schäfer, K., Beijer, S., Bos, N. A., Donus, C., & Hardt, P. D. (2010) · Obesity · doi:10.1038/oby.2009.167 · Cited by 2,457

Microbial degradation of complex carbohydrates in the gut

Flint, H. J., Scott, K. P., Duncan, S. H., Louis, P., & Forano, E. (2012) · Gut Microbes · doi:10.4161/gmic.19897 · Cited by 2,331

Health benefits of dietary fiber

Anderson, J. W., Baird, P., Davis Jr, R. H., Ferreri, S., Knudtson, M., Koraym, A., Waters, V., & Williams, C. L. (2009) · Nutrition Reviews · doi:10.1111/j.1753-4887.2009.00189.x · Cited by 2,239

Butyrate improves insulin sensitivity and increases energy expenditure in mice

Gao, Z., Yin, J., Zhang, J., Ward, R. E., Martin, R. J., Lefevre, M., Cefalu, W. T., & Ye, J. (2009) · Diabetes · doi:10.2337/db08-1637 · Cited by 2,204

A purified membrane protein from Akkermansia muciniphila or the pasteurized bacterium improves metabolism in obese and diabetic mice

Plovier, H., Everard, A., Druart, C., Depommier, C., Van Hul, M., Geurts, L., Chilloux, J., Ottman, N., Duparc, T., Lichtenstein, L., et al. (2017) · Nature Medicine · doi:10.1038/nm.4236 · Cited by 2,204

Akkermansia muciniphila and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology

Dao, M. C., Everard, A., Aron-Wisnewsky, J., Sokolovska, N., Prifti, E., Verger, E. O., Kayser, B. D., Levenez, F., Chilloux, J., Hoyles, L., et al. (2016) · Gut · doi:10.1136/gutjnl-2014-308778 · Cited by 1,931

HIGH ABSORPTION BUT VERY LOW BIOAVAILABILITY OF ORAL RESVERATROL IN HUMANS

Walle, T., Hsieh, F., DeLegge, M. H., Oatis, J. E., & Walle, U. K. (2004) · Drug Metabolism and Disposition · doi:10.1124/dmd.104.000885 · Cited by 1,893

Bifidobacteria and Butyrate-Producing Colon Bacteria: Importance and Strategies for Their Stimulation in the Human Gut

Rivière, A., Selak, M., Lantin, D., Leroy, F., & Vuyst, L. D. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.00979 · Cited by 1,810

You are what you eat: Diet, health and the gut microbiota

Zmora, N., Suez, J., & Elinav, E. (2019) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/s41575-018-0061-2 · Cited by 1,792

Diet-induced extinctions in the gut microbiota compound over generations

Sonnenburg, E. D., Smits, S. A., Tikhonov, M., Higginbottom, S. K., Wingreen, N. S., & Sonnenburg, J. L. (2016) · Nature · doi:10.1038/nature16504 · Cited by 1,730

Dominant and diet-responsive groups of bacteria within the human colonic microbiota

Walker, A. W., Ince, J., Duncan, S. H., Webster, L. M., Holtrop, G., Ze, X., Brown, D., Stares, M. D., Scott, P., Bergerat, A., et al. (2011) · The ISME Journal · doi:10.1038/ismej.2010.118 · Cited by 1,632

An increase in the Akkermansia spp. population induced by metformin treatment improves glucose homeostasis in diet-induced obese mice

Shin, N.-R., Lee, J.-C., Lee, H.-Y., Kim, M.-S., Whon, T. W., Lee, M.-S., & Bae, J.-W. (2014) · Gut · doi:10.1136/gutjnl-2012-303839 · Cited by 1,550

Effects of targeted delivery of propionate to the human colon on appetite regulation, body weight maintenance and adiposity in overweight adults

Chambers, E. S., Viardot, A., Psichas, A., Morrison, D. J., Murphy, K. G., Zac-Varghese, S. E. K., MacDougall, K., Preston, T., Tedford, C., Finlayson, G. S., et al. (2015) · Gut · doi:10.1136/gutjnl-2014-307913 · Cited by 1,424

Butyrate inhibits inflammatory responses through NFκB inhibition: implications for Crohn's disease

Segain, J.-P., de la Blétière, D. R., Bourreille, A., Leray, V., Gervois, N., Rosales, C., Ferrier, L., Bonnet, C., Blottière, H. M., & Galmiche, J.-P. (2000) · Gut · doi:10.1136/gut.47.3.397 · Cited by 1,357

Dysbiosis of the faecal microbiota in patients with Crohn’s disease and their unaffected relatives

Joossens, M., Huys, G., Cnockaert, M., De Preter, V., Verbeke, K., Rutgeerts, P., Vandamme, P., & Vermeire, S. (2011) · Gut · doi:10.1136/gut.2010.223263 · Cited by 1,063

The gut microbiota at the intersection of diet and human health

Gentile, C. L., & Weir, T. L. (2018) · Science · doi:10.1126/science.aau5812 · Cited by 1,049

Links between diet, gut microbiota composition and gut metabolism

Flint, H. J., Duncan, S. H., Scott, K. P., & Louis, P. (2015) · Proceedings of the Nutrition Society · doi:10.1017/s0029665114001463 · Cited by 1,020

Reduced dietary intake of carbohydrates by obese subjects results in decreased concentrations of butyrate and butyrate-producing bacteria in feces

Duncan, S. H., Belenguer, A., Holtrop, G., Johnstone, A. M., Flint, H. J., & Lobley, G. E. (2007) · Applied and Environmental Microbiology · doi:10.1128/aem.02340-06 · Cited by 941

Mechanisms of inflammation-driven bacterial dysbiosis in the gut

Zeng, M. Y., Inohara, N., & Núñez, G. (2016) · Mucosal Immunology · doi:10.1038/mi.2016.75 · Cited by 896

The role of pH in determining the species composition of the human colonic microbiota

Duncan, S. H., Louis, P., Thomson, J. M., & Flint, H. J. (2009) · Environmental Microbiology · doi:10.1111/j.1462-2920.2009.01931.x · Cited by 786

Understanding the effects of diet on bacterial metabolism in the large intestine

Louis, P., Scott, K. P., Duncan, S. H., & Flint, H. J. (2007) · Journal of Applied Microbiology · doi:10.1111/j.1365-2672.2007.03322.x · Cited by 775

The immune system and the gut microbiota: friends or foes?

Cerf-Bensussan, N., & Gaboriau-Routhiau, V. (2010) · Nature Reviews Immunology · doi:10.1038/nri2850 · Cited by 704

Dietary Polyphenols Promote Growth of the Gut Bacterium Akkermansia muciniphila and Attenuate High-Fat Diet–Induced Metabolic Syndrome

Roopchand, D. E., Carmody, R. N., Kuhn, P., Moskal, K., Rojas-Silva, P., Turnbaugh, P. J., & Raskin, I. (2015) · Diabetes · doi:10.2337/db14-1916 · Cited by 678

Resistant Starches Types 2 and 4 Have Differential Effects on the Composition of the Fecal Microbiota in Human Subjects

Martínez, I., Kim, J., Duffy, P. R., Schlegel, V. L., & Walter, J. (2010) · PLoS ONE · doi:10.1371/journal.pone.0015046 · Cited by 645

Pili-like proteins of Akkermansia muciniphila modulate host immune responses and gut barrier function

Ottman, N., Reunanen, J., Meijerink, M., Pietilä, T. E., Kainulainen, V., Klievink, J., Huuskonen, L., Aalvink, S., Skurnik, M., Boeren, S. A., et al. (2017) · PLoS ONE · doi:10.1371/journal.pone.0173004 · Cited by 536

Flavanol monomer-induced changes to the human faecal microflora

Tzounis, X., Vulevic, J., Kuhnle, G., George, T. W., Leonczak, J., Gibson, G. R., Kwik-Uribe, C. L., & Spencer, J. P. E. (2007) · British Journal Of Nutrition · doi:10.1017/s0007114507853384 · Cited by 455

Sodium butyrate attenuates high-fat diet-induced steatohepatitis in mice by improving gut microbiota and gastrointestinal barrier

Zhou, D., Pan, Q., Xin, F.-Z., Zhang, R.-N., He, C.-X., Chen, G.-Y., Liu, C., Chen, Y.-W., & Fan, J.-G. (2017) · World Journal of Gastroenterology · doi:10.3748/wjg.v23.i1.60 · Cited by 441

Microbial metabolism of dietary phenolic compounds in the colon

Aura, A. (2008) · Phytochemistry Reviews · doi:10.1007/s11101-008-9095-3 · Cited by 417

Intestinal Colonization by a Lachnospiraceae Bacterium Contributes to the Development of Diabetes in Obese Mice

Kameyama, K., & Itoh, K. (2014) · Microbes and Environments · doi:10.1264/jsme2.me14054 · Cited by 388

NLRP6 Protects Il10 Mice from Colitis by Limiting Colonization of Akkermansia muciniphila

Seregin, S. S., Golovchenko, N., Schaf, B., Chen, J., Pudlo, N. A., Mitchell, J., Baxter, N. T., Zhao, L., Schloss, P. D., Martens, E. C., et al. (2017) · Cell Reports · doi:10.1016/j.celrep.2017.03.080 · Cited by 386

Metabolism of anthocyanins and their phenolic degradation products by the intestinal microflora

Keppler, K., & Humpf, H. (2005) · Bioorganic & Medicinal Chemistry · doi:10.1016/j.bmc.2005.05.003 · Cited by 376

Butyricicoccus pullicaecorum in inflammatory bowel disease

Eeckhaut, V., Machiels, K., Perrier, C., Romero, C., Maes, S., Flahou, B., Steppe, M., Haesebrouck, F., Sas, B., Ducatelle, R., et al. (2012) · Gut · doi:10.1136/gutjnl-2012-303611 · Cited by 368

Strain-Specific Anti-inflammatory Properties of Two Akkermansia muciniphila Strains on Chronic Colitis in Mice

Zhai, R., Xue, X., Zhang, L., Yang, X., Zhao, L., & Zhang, C. (2019) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2019.00239 · Cited by 368

Phylogenetic Analysis of Dysbiosis in Ulcerative Colitis During Remission

Rajilić-Stojanović, M. D., Shanahan, F., Guarner, F., & de Vos, W. M. (2013) · Inflammatory Bowel Diseases · doi:10.1097/mib.0b013e31827fec6d · Cited by 360

Linking the gut microbiota to human health

Robles, V., & Guarner, F. (2013) · British Journal Of Nutrition · doi:10.1017/s0007114512005235 · Cited by 313

Six-Week Consumption of a Wild Blueberry Powder Drink Increases Bifidobacteria in the Human Gut

Vendrame, S., Guglielmetti, S., Riso, P., Arioli, S., Klimis‐Zacas, D. J., & Porrini, M. (2011) · Journal of Agricultural and Food Chemistry · doi:10.1021/jf2028686 · Cited by 313

Isolation and characterization of human colonic bacteria able to hydrolyse chlorogenic acid

Couteau, D., McCartney, A. L., Gibson, G. R., Williamson, G., & Faulds, C. B. (2001) · Journal of Applied Microbiology · doi:10.1046/j.1365-2672.2001.01316.x · Cited by 305

Esterase Activity Able To Hydrolyze Dietary Antioxidant Hydroxycinnamates Is Distributed along the Intestine of Mammals

Andreasen, M. F., Kroon, P. A., Williamson, G., & García‐Conesa, M. (2001) · Journal of Agricultural and Food Chemistry · doi:10.1021/jf010668c · Cited by 298

Immunological alteration and changes of gut microbiota after dextran sulfate sodium (DSS) administration in mice

Håkansson, Å., Tormo-Badia, N., Baridi, A., Xu, J., Molin, G., Hagslätt, M.-L. J., Karlsson, C., Jeppsson, B. W., Cilio, C., & Ahrné, S. (2014) · Clinical and Experimental Medicine · doi:10.1007/s10238-013-0270-5 · Cited by 276

Active Crohnʼs disease and ulcerative colitis can be specifically diagnosed and monitored based on the biostructure of the fecal flora

Swidsinski, A. V., Loening-Baucke, V. A., Vaneechoutte, M., & Dörffel, Y. (2007) · Inflammatory Bowel Diseases · doi:10.1002/ibd.20330 · Cited by 276

Comparative effects of very low-carbohydrate, high-fat and high-carbohydrate, low-fat weight-loss diets on bowel habit and faecal short-chain fatty acids and bacterial populations

Brinkworth, G. D., Noakes, M., Clifton, P. M., & Bird, A. R. (2009) · British Journal Of Nutrition · doi:10.1017/s0007114508094658 · Cited by 269

Prevotella-to-Bacteroides ratio predicts body weight and fat loss success on 24-week diets varying in macronutrient composition and dietary fiber: results from a post-hoc analysis

Hjorth, M. F., Blædel, T., Bendtsen, L. Q., Lorenzen, J. K., Holm, J. B., Kiilerich, P., Roager, H. M., Kristiansen, K., Larsen, L. H., & Astrup, A. V. (2018) · International Journal of Obesity · doi:10.1038/s41366-018-0093-2 · Cited by 268

Dietary Polyphenols and Human Gut Microbiota: a Review

Hervert-Hernández, D., & Goñi, I. (2010) · Food Reviews International · doi:10.1080/87559129.2010.535233 · Cited by 257

Colonic mucosa-associated diffusely adherent afaC+ Escherichia coli expressing lpfA and pks are increased in inflammatory bowel disease and colon cancer

Prorok-Hamon, M., Friswell, M. K., Alswied, A., Roberts, C. L., Song, F., Flanagan, P. K., Knight, P., Codling, C., Marchesi, J. R., Winstanley, C., et al. (2014) · Gut · doi:10.1136/gutjnl-2013-304739 · Cited by 236

Blueberry Supplementation Influences the Gut Microbiota, Inflammation, and Insulin Resistance in High-Fat-Diet–Fed Rats

Lee, S., Keirsey, K. I., Kirkland, R. A., Grunewald, Z. I., Fischer, J. G., & Serre, C. B. D. L. (2018) · Journal of Nutrition · doi:10.1093/jn/nxx027 · Cited by 228

Phylogeny of human intestinal bacteria that activate the dietary lignan secoisolariciresinol diglucoside

Clavel, T., Henderson, G., Engst, W., Dore, J. M., & Blaut, M. (2006) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2005.00057.x · Cited by 209

Intestinal Bacterial Communities That Produce Active Estrogen-Like Compounds Enterodiol and Enterolactone in Humans

Clavel, T., Henderson, G., Alpert, C.-A., Philippe, C., Rigottier‐Gois, L., Dore, J. M., & Blaut, M. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.10.6077-6085.2005 · Cited by 208

Mebolism of drugs and other xenobiotics in the gut lumen and wall

Ilett, K. F., Tee, L. B. G., Reeves, P. T., & Minchin, R. F. (1990) · Pharmacology & Therapeutics · doi:10.1016/0163-7258(90)90036-2 · Cited by 205

Effect of Probiotics Lactobacillus and Bifidobacterium on Gut-Derived Lipopolysaccharides and Inflammatory Cytokines: An In Vitro Study Using a Human Colonic Microbiota Model

Rodes, L. (2013) · Journal of Microbiology and Biotechnology · doi:10.4014/jmb.1205.05018 · Cited by 178

The biodiversity and composition of the dominant fecal microbiota in patients with inflammatory bowel disease

Sha, S., Xu, B., Wang, X., Zhang, Y., Wang, H., Kong, X., Zhu, H., & Wu, K. (2012) · Diagnostic Microbiology and Infectious Disease · doi:10.1016/j.diagmicrobio.2012.11.022 · Cited by 165

Anthocyanin-rich fractions from red raspberries attenuate inflammation in both RAW264.7 macrophages and a mouse model of colitis

Li, L., Wang, L., Wu, Z., Yao, L., Wu, Y., Huang, L., Liu, K., Zhou, X., & Gou, D. (2014) · Scientific Reports · doi:10.1038/srep06234 · Cited by 162

Lotus Seed Resistant Starch Regulates Gut Microbiota and Increases Short-Chain Fatty Acids Production and Mineral Absorption in Mice

Zeng, H., Huang, C., Lin, S., Zheng, M., Chen, C., Zheng, B., & Zhang, Y. (2017) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.7b02860 · Cited by 161

Proanthocyanidin metabolites associated with dietary fibre from in vitro colonic fermentation and proanthocyanidin metabolites in human plasma

Saura-Calixto, F. D., Pérez‐Jiménez, J., Touriño, S., Serrano, J. C. E., Fuguet, E., Torres, J. L., & Goñi, I. (2010) · Molecular Nutrition & Food Research · doi:10.1002/mnfr.200900276 · Cited by 156

Red pitaya betacyanins protects from diet‐induced obesity, liver steatosis and insulin resistance in association with modulation of gut microbiota in mice

Song, H., Chu, Q., Yan, F., Yang, Y., Han, W., & Zheng, X. (2015) · Journal of Gastroenterology and Hepatology · doi:10.1111/jgh.13278 · Cited by 156

Pomegranate extract induces ellagitannin metabolite formation and changes stool microbiota in healthy volunteers

Li, Z., Henning, S. M., Lee, R., Lu, Q., Summanen, P. H., Thames, G., Corbett, K. M., Downes, J., Tseng, C., Finegold, S. M., et al. (2015) · Food & Function · doi:10.1039/c5fo00669d · Cited by 153

Functional Impacts of the Intestinal Microbiome in the Pathogenesis of Inflammatory Bowel Disease

Li, J. S. Y., Butcher, J., Mack, D. R., & Stintzi, A. (2014) · Inflammatory Bowel Diseases · doi:10.1097/mib.0000000000000215 · Cited by 152

Probiotics and prebiotics in inflammatory bowel disease: microflora ‘on the scope’

Damaskos, D., & Kolios, G. C. (2008) · British Journal of Clinical Pharmacology · doi:10.1111/j.1365-2125.2008.03096.x · Cited by 151

Isoflavones and Functional Foods Alter the Dominant Intestinal Microbiota in Postmenopausal Women

Clavel, T., Fallani, M., Lepage, P., Levenez, F., Mathey, J., Rochet, V., SEREZAT, M., Sutren, M., Henderson, G., Bennetau‐Pelissero, C., et al. (2005) · Journal of Nutrition · doi:10.1093/jn/135.12.2786 · Cited by 151

Effect of Daily Consumption of Orange Juice on the Levels of Blood Glucose, Lipids, and Gut Microbiota Metabolites: Controlled Clinical Trials

Lima, A. C. D., Cecatti, C., Fidélix, M. P., Adorno, M. Â. T., Sakamoto, I. K., Cesar, T. B., & Sivieri, K. (2019) · Journal of Medicinal Food · doi:10.1089/jmf.2018.0080 · Cited by 150

Lactobacillus fermentum, a probiotic capable to release glutathione, prevents colonic inflammation in the TNBS model of rat colitis

Perán, L., Camuesco, D., Comalada, M., Nieto, A., Concha, Á., Adrio, J. L., Olivares, M. M., Xaus, J., Zarzuelo, A., & Gálvez, J. (2005) · International Journal of Colorectal Disease · doi:10.1007/s00384-005-0773-y · Cited by 146

Modulation of Helicobacter pylori colonization with cranberry juice and Lactobacillus johnsonii La1 in children

Gotteland, M., Andrews, M., Toledo, M., Muñoz, L. A., Cáceres, P., Anziani, A., Wittig, E., Speisky, H., & Salazar, G. (2008) · Nutrition · doi:10.1016/j.nut.2008.01.007 · Cited by 146

Effects of Commercial Apple Varieties on Human Gut Microbiota Composition and Metabolic Output Using an In Vitro Colonic Model

Koutsos, A., Lima, M., Conterno, L., Gasperotti, M., Bianchi, M., Fava, F., Vrhovšek, U., Lovegrove, J. A., & Tuohy, K. M. (2017) · Nutrients · doi:10.3390/nu9060533 · Cited by 144

Broccoli consumption affects the human gastrointestinal microbiota

Kaczmarek, J. L., Liu, X., Charron, C. S., Novotny, J. A., Jeffery, E. H., Seifried, H. E., Ross, S. A., Miller, M. J., Swanson, K. S., & Holscher, H. D. (2018) · The Journal of Nutritional Biochemistry · doi:10.1016/j.jnutbio.2018.09.015 · Cited by 139

Bilberry anthocyanin extract promotes intestinal barrier function and inhibits digestive enzyme activity by regulating the gut microbiota in aging rats

Li, J., Wu, T., Li, N., Wang, X., Chen, G., & Lyu, X. (2018) · Food & Function · doi:10.1039/c8fo01962b · Cited by 138

Effect of apple intake on fecal microbiota and metabolites in humans

Shinohara, K., Ohashi, Y., Kawasumi, K., Terada, A., & Fujisawa, T. (2010) · Anaerobe · doi:10.1016/j.anaerobe.2010.03.005 · Cited by 137

Phenolic metabolites and substantial microbiome changes in pig feces by ingesting grape seed proanthocyanidins

Choy, Y. Y., Quifer‐Rada, P., Holstege, D. M., Frese, S. A., Calvert, C. C., Mills, D. A., Lamuela-Raventós, R. M., & Waterhouse, A. L. (2014) · Food & Function · doi:10.1039/c4fo00325j · Cited by 133

Dietary Intake of Whole Strawberry Inhibited Colonic Inflammation in Dextran-Sulfate-Sodium-Treated Mice via Restoring Immune Homeostasis and Alleviating Gut Microbiota Dysbiosis

Han, Y., Song, M., Gu, M., Ren, D., Zhu, X., Cao, X., Li, F., Wang, W., Cai, X., Yuan, B., et al. (2019) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.8b05581 · Cited by 133

Impact of tart cherries polyphenols on the human gut microbiota and phenolic metabolites in vitro and in vivo

Mayta-Apaza, A. C., Pottgen, E., Bodt, J. D., Papp, N., Marasini, D., Howard, L. R., Abrankó, L., de Wiele, T. V., Lee, S., & Carbonero, F. G. (2018) · The Journal of Nutritional Biochemistry · doi:10.1016/j.jnutbio.2018.04.001 · Cited by 130

Differential modulation of human intestinal Bifidobacterium populations after consumption of a wild blueberry (Vaccinium angustifolium) drink

Guglielmetti, S., Fracassetti, D., Taverniti, V., Del Bo’, C., Vendrame, S., Klimis-Zacas, D., Arioli, S., Riso, P., & Porrini, M. (2013) · Journal of Agricultural and Food Chemistry · doi:10.1021/jf402495k · Cited by 123

Cranberries attenuate animal-based diet-induced changes in microbiota composition and functionality: a randomized crossover controlled feeding trial

Rodríguez-Morató, J., Matthan, N. R., Liu, J., de la Torre, R., & Chen, C.-Y. O. (2018) · The Journal of Nutritional Biochemistry · doi:10.1016/j.jnutbio.2018.08.019 · Cited by 121

Effects of apples and specific apple components on the cecal environment of conventional rats: role of apple pectin

Licht, T. R., Hansen, M., Bergström, A., Poulsen, M., Krath, B. N., Markowski, J., Dragsted, L. O., & Wilcks, A. (2010) · BMC Microbiology · doi:10.1186/1471-2180-10-13 · Cited by 115

Response of gut microbiota and inflammatory status to bitter melon (Momordica charantia L.) in high fat diet induced obese rats

Bai, J., Zhu, Y. G., & Dong, Y. (2016) · Journal of Ethnopharmacology · doi:10.1016/j.jep.2016.10.043 · Cited by 115

Mulberry anthocyanin biotransformation by intestinal probiotics

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Contribution of gut bacteria to the metabolism of cyanidin 3-glucoside in human microbiota-associated rats

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Hass Avocado Inclusion in a Weight-Loss Diet Supported Weight Loss and Altered Gut Microbiota: A 12-Week Randomized, Parallel-Controlled Trial

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A Human Gut Commensal Ferments Cranberry Carbohydrates To Produce Formate

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In Colon Epithelia, Clostridium perfringens Enterotoxin Causes Focal Leaks by Targeting Claudins Which are Apically Accessible Due to Tight Junction Derangement

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