Functional connectivity-based subtypes of individuals with and without autism spectrum disorder
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Abstract
Autism spectrum disorder (ASD) is a heterogeneous neurodevelopmental disorder, characterized by impairments in social communication and restricted, repetitive behaviors. Neuroimaging studies have shown complex patterns and functional connectivity (FC) in ASD, with no clear consensus on brain-behavior relationships or shared patterns of FC with typically developing controls. Here, we used a dimensional approach to characterize two distinct clusters of FC patterns across both ASD participants and controls using k-means clustering. Using multivariate statistical analyses, a categorical approach was taken to characterize differences in FC between subtypes and between diagnostic groups. One subtype was defined by increased FC within resting-state networks and decreased FC across networks compared with the other subtype. A separate FC pattern distinguished ASD from controls, particularly within default mode, cingulo-opercular, sensorimotor, and occipital networks. There was no significant interaction between subtypes and diagnostic groups. Finally, a dimensional analysis of FC patterns with behavioral measures of IQ, social responsiveness, and ASD severity showed unique brain-behavior relations in each subtype and a continuum of brain-behavior relations from ASD to controls within one subtype. These results demonstrate that distinct clusters of FC patterns exist across ASD and controls, and that FC subtypes can reveal unique information about brain-behavior relationships.
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ASD subtype nesting using network-based functional connectivity found two subtypes associated with general within- and between-network connectivity in both ASD and control samples.
“From 250 children within the Autism Brain Im- aging Data Exchange Consortium, investigators found two subtypes associated with general within- and between- network connectivity in both ASD and control samples.”
From Methods and challenges for assessing heterogeneity (2020) · cites this paper as [49]
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Cites
Diagnostic and Statistical Manual of Mental Disorders
American Psychiatric Association (2013) · doi:10.1176/appi.books.9780890425596 · Cited by 116,369 · see citing works
Lord, C., Rutter, M., & Le Couteur, A. (1994) · Journal of Autism and Developmental Disorders · doi:10.1007/bf02172145 · Cited by 9,065 · see citing works
The human brain is intrinsically organized into dynamic, anticorrelated functional networks
Fox, M. D., Snyder, A. Z., Vincent, J. L., Corbetta, M., Van Essen, D. C., & Raichle, M. E. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0504136102 · Cited by 8,553 · see citing works
Lord, C., Risi, S., Lambrecht, L., Cook, E. H., Leventhal, B. L., DiLavore, P. C., Pickles, A., & Rutter, M. (2000) · Journal of Autism and Developmental Disorders · doi:10.1023/a:1005592401947 · Cited by 7,520 · see citing works
Baron-Cohen, S., Wheelwright, S., Skinner, R., Martin, J., & Clubley, E. (2001) · Journal of Autism and Developmental Disorders · doi:10.1023/a:1005653411471 · Cited by 6,450 · cited 2× · see citing works
“…the continuum of FC-behavior relationships across participants in different subtypes, future studies should collect measures of subclinical ASD behaviors using scales such as the SRS and Autism-Spectrum Quotient (AQ; Baron-Cohen et al., 2001), which is a brief self-report of ASD traits.”
Functional connectivity in the resting brain: a network analysis of the default mode hypothesis
Greicius, M. D., Krasnow, B., Reiss, A. L., & Menon, V. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0135058100 · Cited by 6,358 · see citing works
Functional Network Organization of the Human Brain
Power, J. D., Cohen, A. L., Nelson, S. M., Wig, G. S., Barnes, K. A., Church, J. A., Vogel, A. C., Laumann, T. O., Miezin, F. M., Schlaggar, B. L., et al. (2011) · Neuron · doi:10.1016/j.neuron.2011.09.006 · Cited by 4,124 · see citing works
MEG and EEG data analysis with MNE-Python
Gramfort, A. (2013) · Frontiers in Neuroscience · doi:10.3389/fnins.2013.00267 · Cited by 3,879 · see citing works
Methods to detect, characterize, and remove motion artifact in resting state fMRI
Power, J. D., Mitra, A., Laumann, T. O., Snyder, A. Z., Schlaggar, B. L., & Petersen, S. E. (2014) · NeuroImage · doi:10.1016/j.neuroimage.2013.08.048 · Cited by 3,748 · see citing works
Di Martino, A., Yan, C.-G., Li, Q., Denio, E., Castellanos, F. X., Alaerts, K., Anderson, J. S., Assaf, M., Bookheimer, S. Y., Dapretto, M., et al. (2014) · Molecular Psychiatry · doi:10.1038/mp.2013.78 · Cited by 2,780 · see citing works
Distinct brain networks for adaptive and stable task control in humans
Dosenbach, N. U. F., Fair, D. A., Miezin, F. M., Cohen, A. L., Wenger, K. K., Dosenbach, R. A. T., Fox, M. D., Snyder, A. Z., Vincent, J. L., Raichle, M. E., et al. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0704320104 · Cited by 2,632 · see citing works
Prediction of individual brain maturity using fMRI
Dosenbach, N. U. F., Nardos, B., Cohen, A. L., Fair, D. A., Power, J. D., Church, J. A., Nelson, S. M., Wig, G. S., Vogel, A. C., Lessov-Schlaggar, C. N., et al. (2010) · Science · doi:10.1126/science.1194144 · Cited by 2,183 · see citing works
MNE software for processing MEG and EEG data
Gramfort, A., Luessi, M., Larson, E., Engemann, D. A., Strohmeier, D., Brodbeck, C. J., Parkkonen, L. T., & Hämäläinen, M. (2013) · NeuroImage · doi:10.1016/j.neuroimage.2013.10.027 · Cited by 1,924 · see citing works
ICA-AROMA: A robust ICA-based strategy for removing motion artifacts from fMRI data
Pruim, R. H. R., Mennes, M., van Rooij, D., Llera, A., Buitelaar, J. K., & Beckmann, C. F. (2015) · NeuroImage · doi:10.1016/j.neuroimage.2015.02.064 · Cited by 1,684 · see citing works
Partial Least Squares (PLS) methods for neuroimaging: A tutorial and review
Krishnan, A., Williams, L. J., McIntosh, A. R., & Abdi, H. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.07.034 · Cited by 1,335 · see citing works
Self-citationAutistic Traits in the General Population: A Twin Study
Constantino, J. N., & Todd, R. D. (2003) · Archives of General Psychiatry · doi:10.1001/archpsyc.60.5.524 · Cited by 1,317 · see citing works
Autism and Abnormal Development of Brain Connectivity: Figure 1.
Belmonte, M. K., Allen, G., Beckel-Mitchener, A., Boulanger, L. M., Carper, R. A., & Webb, S. J. (2004) · The Journal of Neuroscience · doi:10.1523/jneurosci.3340-04.2004 · Cited by 1,217 · see citing works
Spatial Pattern Analysis of Functional Brain Images Using Partial Least Squares
McIntosh, A. R., Bookstein, F. L., Haxby, J. V., & Grady, C. L. (1996) · NeuroImage · doi:10.1006/nimg.1996.0016 · Cited by 1,095 · see citing works
Self-citationPartial least squares analysis of neuroimaging data: applications and advances
McIntosh, A. R., & Lobaugh, N. J. (2004) · NeuroImage · doi:10.1016/j.neuroimage.2004.07.020 · Cited by 1,084 · see citing works
Self-citationCiric, R., Wolf, D. H., Power, J. D., Roalf, D. R., Baum, G. L., Ruparel, K., Shinohara, R. T., Elliott, M. A., Eickhoff, S. B., Davatzikos, C., et al. (2017) · NeuroImage · doi:10.1016/j.neuroimage.2017.03.020 · Cited by 1,042 · see citing works
Courchesne, E., & Pierce, K. (2005) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2005.03.001 · Cited by 968 · see citing works
The effect of scan length on the reliability of resting-state fMRI connectivity estimates
Birn, R. M., Molloy, E. K., Patriat, R., Parker, T., Meier, T. B., Kirk, G. R., Nair, V. A., Meyerand, M. E., & Prabhakaran, V. (2013) · NeuroImage · doi:10.1016/j.neuroimage.2013.05.099 · Cited by 875 · see citing works
Abnormal functional connectivity of default mode sub-networks in autism spectrum disorder patients
Assaf, M., Jagannathan, K., Calhoun, V. D., Miller, L., Stevens, M. C., Sahl, R., O'Boyle, J. G., Schultz, R. T., & Pearlson, G. D. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.05.067 · Cited by 680 · see citing works
Salience Network–Based Classification and Prediction of Symptom Severity in Children With Autism
Uddin, L. Q., Supekar, K., Lynch, C. J., Khouzam, A., Phillips, J., Feinstein, C., Ryali, S., & Menon, V. (2013) · JAMA Psychiatry · doi:10.1001/jamapsychiatry.2013.104 · Cited by 621 · see citing works
How default is the default mode of brain function?
Fransson, P. (2006) · Neuropsychologia · doi:10.1016/j.neuropsychologia.2006.06.017 · Cited by 611 · see citing works
Reconceptualizing functional brain connectivity in autism from a developmental perspective
Uddin, L. Q., Supekar, K., & Menon, V. (2013) · Frontiers in Human Neuroscience · doi:10.3389/fnhum.2013.00458 · Cited by 582 · see citing works
Autism as a neural systems disorder: A theory of frontal-posterior underconnectivity
Just, M. A., Keller, T. A., Malave, V. L., Kana, R. K., & Varma, S. (2012) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2012.02.007 · Cited by 578 · see citing works
Abnormalities of intrinsic functional connectivity in autism spectrum disorders
Monk, C. S., Peltier, S. J., Wiggins, J. L., Weng, S.-J., Carrasco, M., Risi, S., & Lord, C. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2009.04.069 · Cited by 578 · see citing works
Neuropsychologic functioning in autism: Profile of a complex information processing disorder.
MINSHEW, N. J., GOLDSTEIN, G., & SIEGEL, D. J. (1997) · Journal of the International Neuropsychological Society · doi:10.1017/s1355617797003032 · Cited by 572 · see citing works
Resting-state functional connectivity in autism spectrum disorders: a review
Hull, J. V., Dokovna, L. B., Jacokes, Z. J., Torgerson, C. M., Irimia, A., & Van Horn, J. D. (2017) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2016.00205 · Cited by 546 · see citing works
Sources and implications of whole-brain fMRI signals in humans
Power, J. D., Plitt, M. H., Laumann, T. O., & Martin, A. D. (2016) · NeuroImage · doi:10.1016/j.neuroimage.2016.09.038 · Cited by 534 · see citing works
The intrinsic functional organization of the brain is altered in autism
Kennedy, D. P., & Courchesne, E. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2007.10.052 · Cited by 495 · see citing works
Evaluation of ICA-AROMA and alternative strategies for motion artifact removal in resting state fMRI
Pruim, R. H. R., Mennes, M., Buitelaar, J. K., & Beckmann, C. F. (2015) · NeuroImage · doi:10.1016/j.neuroimage.2015.02.063 · Cited by 487 · see citing works
Craddock, R. C., Benhajali, Y., Chu, C., Chouinard-Decorte, F., Alan, E., András, J., Khundrakpam, B. S., John, L., Li, Q., Milham, M. P., et al. (2013) · Frontiers in Neuroinformatics · doi:10.3389/conf.fninf.2013.09.00041 · Cited by 485 · see citing works
Decreased connectivity and cerebellar activity in autism during motor task performance
Mostofsky, S. H., Powell, S. K., Simmonds, D. J., Goldberg, M. C., Caffo, B., & Pekar, J. J. (2009) · Brain · doi:10.1093/brain/awp088 · Cited by 450 · see citing works
Müller, R., Shih, P., Keehn, B., Deyoe, J. R., Leyden, K. M., & Shukla, D. K. (2011) · Cerebral Cortex · doi:10.1093/cercor/bhq296 · Cited by 450 · see citing works
Decreased interhemispheric functional connectivity in autism
Anderson, J. S., Druzgal, T. J., Froehlich, A., DuBray, M. B., Lange, N., Alexander, A. L., Abildskov, T., Nielsen, J. A., Cariello, A. N., Cooperrider, J. R., et al. (2011) · Cerebral Cortex · doi:10.1093/cercor/bhq190 · Cited by 438 · see citing works
Weng, S.-J., Wiggins, J. L., Peltier, S., Carrasco, M., Risi, S., Lord, C., & Monk, C. S. (2009) · Brain Research · doi:10.1016/j.brainres.2009.11.057 · Cited by 421 · see citing works
The idiosyncratic brain: distortion of spontaneous connectivity patterns in autism spectrum disorder
Hahamy, A., Behrmann, M., & Malach, R. (2015) · Nature Neuroscience · doi:10.1038/nn.3919 · Cited by 416 · see citing works
Altered functional and structural brain network organization in autism
Rudie, J. D., Brown, J. A., Beck-Pancer, D., Hernandez, L. M., Dennis, E. L., Thompson, P. M., Bookheimer, S. Y., & Dapretto, M. (2013) · NeuroImage: Clinical · doi:10.1016/j.nicl.2012.11.006 · Cited by 411 · see citing works
Functional connectivity magnetic resonance imaging classification of autism
Anderson, J. S., Nielsen, J. A., Froehlich, A. L., DuBray, M. B., Druzgal, T. J., Cariello, A. N., Cooperrider, J. R., Zielinski, B. A., Ravichandran, C., Fletcher, P. T., et al. (2011) · Brain · doi:10.1093/brain/awr263 · Cited by 405 · see citing works
Sensorimotor gating deficits in adults with autism
Perry, W., Minassian, A., Lopez, B., Maron, L., & Lincoln, A. (2007) · Biological Psychiatry · doi:10.1016/j.biopsych.2005.09.025 · Cited by 352 · see citing works
Keown, C. L., Shih, P., Nair, A., Peterson, N., Mulvey, M. E., & Müller, R. (2013) · Cell Reports · doi:10.1016/j.celrep.2013.10.003 · Cited by 283 · see citing works
Developmental changes in large-scale network connectivity in autism
Nomi, J. S., & Uddin, L. Q. (2015) · NeuroImage: Clinical · doi:10.1016/j.nicl.2015.02.024 · Cited by 274 · see citing works
Georgiades, S., Szatmari, P., Boyle, M., Hanna, S., Duku, E., Zwaigenbaum, L., Bryson, S., Fombonne, E., Volden, J., Mirenda, P., et al. (2013) · Journal of Child Psychology and Psychiatry · doi:10.1111/j.1469-7610.2012.02588.x · Cited by 257 · see citing works
Gotts, S. J., Saad, Z. S., Jo, H. J., Wallace, G. L., Cox, R. W., & Martin, A. (2013) · Frontiers in Human Neuroscience · doi:10.3389/fnhum.2013.00356 · Cited by 255 · see citing works
Atypically diffuse functional connectivity between caudate nuclei and cerebral cortex in autism
Turner, K. C., Frost, L., Linsenbardt, D., McIlroy, J. R., & Müller, R.-A. (2006) · Behavioral and Brain Functions · doi:10.1186/1744-9081-2-34 · Cited by 207 · see citing works
Evidence for latent classes of IQ in young children with autism spectrum disorder
Munson, J., Dawson, G., Sterling, L., Beauchaine, T., Zhou, A., Koehler, E., Lord, C., Rogers, S., Sigman, M., Estes, A., et al. (2008) · American Journal on Mental Retardation · doi:10.1352/2008.113:439-452 · Cited by 204 · see citing works
Rudie, J. D., Shehzad, Z. E., Hernandez, L. M., Colich, N. L., Bookheimer, S. Y., Iacoboni, M., & Dapretto, M. (2011) · Cerebral Cortex · doi:10.1093/cercor/bhr171 · Cited by 193 · see citing works
A Connectome Computation System for discovery science of brain
Xu, T., Yang, Z., Jiang, L., Xing, X.-X., & Zuo, X. (2015) · 中国科学通报:英文版 · doi:10.1007/s11434-014-0698-3 · Cited by 167 · see citing works
Intrinsic functional connectivity variance and state‐specific under‐connectivity in autism
Chen, H., Nomi, J. S., Uddin, L. Q., Duan, X., & Chen, H. (2017) · Human Brain Mapping · doi:10.1002/hbm.23764 · Cited by 137 · see citing works
Miller, H. L., Ragozzino, M. E., Cook, E. H., Sweeney, J. A., & Mosconi, M. W. (2015) · Journal of Autism and Developmental Disorders · doi:10.1007/s10803-014-2244-1 · Cited by 131 · see citing works
Multidimensional Neuroanatomical Subtyping of Autism Spectrum Disorder
Hong, S., Valk, S. L., Martino, A. D., Milham, M. P., & Bernhardt, B. C. (2017) · Cerebral Cortex · doi:10.1093/cercor/bhx229 · Cited by 131 · see citing works
Picci, G., Gotts, S. J., & Scherf, K. S. (2016) · Developmental Science · doi:10.1111/desc.12467 · Cited by 122 · see citing works
Rashid, B., Blanken, L. M. E., Muetzel, R. L., Miller, R., Damaraju, E., Arbabshirani, M. R., Erhardt, E. B., Verhulst, F. C., van der Lugt, A., Jaddoe, V. W. V., et al. (2018) · Human Brain Mapping · doi:10.1002/hbm.24064 · Cited by 120 · see citing works
de Lacy, N., Doherty, D., King, B., Rachakonda, S., & Calhoun, V. D. (2017) · NeuroImage Clinical · doi:10.1016/j.nicl.2017.05.024 · Cited by 112 · see citing works
Kaland, N., Smith, L., & Mortensen, E. L. (2007) · Journal of Autism and Developmental Disorders · doi:10.1007/s10803-007-0474-1 · Cited by 101 · see citing works
Idiosyncratic organization of cortical networks in autism spectrum disorder
Nunes, A. S., Peatfield, N. A., Vakorin, V. A., & Doesburg, S. M. (2018) · NeuroImage · doi:10.1016/j.neuroimage.2018.01.022 · Cited by 96 · see citing works
Lee, J. M., Kyeong, S.-H., Kim, E. J., & Cheon, K.-A. A. (2016) · Frontiers in Neuroscience · doi:10.3389/fnins.2016.00191 · Cited by 76 · see citing works
Subtypes of autism by cluster analysis based on structural MRI data
Hrdlička, M., Dudová, I., Beranova, I., Lisý, J., Belsan, T., Neuwirth, J., Komárek, V., Faladová, L., Havlovičová, M., Sedláček, Z., et al. (2005) · European Child & Adolescent Psychiatry · doi:10.1007/s00787-005-0453-z · Cited by 67 · see citing works
Convergent Evidence of Brain Overconnectivity in Children with Autism?
Rudie, J. D., & Dapretto, M. (2013) · Cell Reports · doi:10.1016/j.celrep.2013.10.043 · Cited by 58 · see citing works
Chien, H., Lin, H., Lai, M., Gau, S. S., & Tseng, W. I. (2015) · Autism Research · doi:10.1002/aur.1457 · Cited by 54 · see citing works
Shen, M. D., Shih, P., Öttl, B., Keehn, B., Leyden, K. M., Gaffrey, M. S., & Müller, R. (2012) · NeuroImage · doi:10.1016/j.neuroimage.2012.06.008 · Cited by 50 · see citing works
Identifying and characterizing systematic temporally-lagged BOLD artifacts
Byrge, L. A., & Kennedy, D. P. (2017) · NeuroImage · doi:10.1016/j.neuroimage.2017.12.082 · Cited by 48 · see citing works
A Whole-Brain and Cross-Diagnostic Perspective on Functional Brain Network Dysfunction
Spronk, M., Keane, B. P., Ito, T., Kulkarni, K. R., Ji, J. L., Anticevic, A., & Cole, M. W. (2020) · Cerebral Cortex · doi:10.1093/cercor/bhaa242 · Cited by 40 · see citing works
Editorial: Time to give up on Autism Spectrum Disorder?
Müller, R., & Amaral, D. G. (2017) · Autism Research · doi:10.1002/aur.1746 · Cited by 35 · see citing works
A whole-brain and cross-diagnostic perspective on functional brain network dysfunctionPreprint
Spronk, M., Kulkarni, K. R., Ji, J. L., et al. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/326728 · Cited by 18 · see citing works
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- Easson A. K., Fatima Z., & McIntosh A. R. (2019). Supporting Information for “Functional connectivity-based subtypes of individuals with and without autism spectrum disorder.” Network Neuroscience, 3(2), 344– 362. PMC6370474 30793086
Cited by
Sorted by citations
Wen, G., Cao, P., Bao, H., Yang, W., Zheng, T., & Zai͏̈ane, O. R. (2022) · Computers in Biology and Medicine · doi:10.1016/j.compbiomed.2022.105239 · Cited by 190 · see citing works
Toward Neurosubtypes in Autism
Hong, S., Vogelstein, J. T., Gozzi, A., Bernhardt, B. C., Yeo, B. T. T., Milham, M. P., & Martino, A. D. (2020) · Biological Psychiatry · doi:10.1016/j.biopsych.2020.03.022 · Cited by 167 · see citing works
Molecular and network-level mechanisms explaining individual differences in autism spectrum disorder
Buch, A. M., Vértes, P. E., Seidlitz, J., Kim, S. H., Grosenick, L., & Liston, C. M. (2023) · Nature Neuroscience · doi:10.1038/s41593-023-01259-x · Cited by 156 · see citing works
Tang, S., Sun, N., Floris, D. L., Zhang, X., Martino, A. D., & Yeo, B. T. T. (2019) · Biological Psychiatry · doi:10.1016/j.biopsych.2019.11.009 · Cited by 145 · see citing works
Wolfers, T., Floris, D. L., Dinga, R., van Rooij, D., Isakoglou, C., Kia, S. M., Zabihi, M., Llera, A., Chowdanayaka, R., Kumar, V., et al. (2019) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2019.07.010 · Cited by 126 · see citing works
van Rentergem, J. A. A., Deserno, M. K., & Geurts, H. M. (2021) · Clinical Psychology Review · doi:10.1016/j.cpr.2021.102033 · Cited by 130 · see citing works
Methods and challenges for assessing heterogeneity
Feczko, E., & Fair, D. A. (2020) · Biological Psychiatry · doi:10.1016/j.biopsych.2020.02.015 · Cited by 96 · see citing works
Fractionating autism based on neuroanatomical normative modeling
Zabihi, M., Floris, D. L., Kia, S. M., Wolfers, T., Tillmann, J., Llera, A., Moessnang, C., Banaschewski, T., Holt, R., Baron‐Cohen, S., et al. (2020) · Translational Psychiatry · doi:10.1038/s41398-020-01057-0 · Cited by 99 · see citing works
Mash, L. E., Linke, A. C., Olson, L. A., Fishman, I., Liu, T. T., & Müller, R. (2019) · Human Brain Mapping · doi:10.1002/hbm.24529 · Cited by 96 · see citing works
Li, Y., Zhu, Y., Nguchu, B. A., Wang, Y., Wang, H., Qiu, B., & Wang, X. (2020) · Autism Research · doi:10.1002/aur.2212 · Cited by 95 · see citing works
Resting state EEG power spectrum and functional connectivity in autism: a cross-sectional analysis
Garcés, P., Baumeister, S., Mason, L., Chatham, C. H., Holiga, Š., Dukart, J., Jones, E. J. H., Banaschewski, T., Baron‐Cohen, S., Bölte, S., et al. (2022) · Molecular Autism · doi:10.1186/s13229-022-00500-x · Cited by 78 · see citing works
Applications of Unsupervised Machine Learning in Autism Spectrum Disorder Research: a Review
Parlett-Pelleriti, C., Stevens, E., Dixon, D. R., & Linstead, E. J. (2022) · Review Journal of Autism and Developmental Disorders · doi:10.1007/s40489-021-00299-y · Cited by 71 · see citing works
Understanding the impact of preprocessing pipelines on neuroimaging cortical surface analyses
Bhagwat, N., Barry, A., Dickie, E. W., Brown, S. T., Devenyi, G. A., Hatano, K., DuPré, E., Dagher, A., Chakravarty, M. M., Greenwood, C. M. T., et al. (2021) · GigaScience · doi:10.1093/gigascience/giaa155 · Cited by 67 · see citing works
Brucar, L. R., Feczko, E., Fair, D. A., & Zilverstand, A. (2022) · Biological Psychiatry · doi:10.1016/j.biopsych.2022.12.020 · Cited by 59 · see citing works
Easson, A. K., & McIntosh, A. R. (2019) · Developmental Cognitive Neuroscience · doi:10.1016/j.dcn.2019.100630 · Cited by 53 · see citing works
Self-citationFunctional Connectome–Based Predictive Modeling in Autism
Horien, C. L., Floris, D. L., Greene, A. S., Noble, S., Rolison, M. J., Tejavibulya, L., O’Connor, D. A., McPartland, J. C., Scheinost, D., Chawarska, K., et al. (2022) · Biological Psychiatry · doi:10.1016/j.biopsych.2022.04.008 · Cited by 47 · see citing works
Scan Once, Analyse Many: Using Large Open-Access Neuroimaging Datasets to Understand the Brain
Madan, C. (2020) · Neuroinformatics · doi:10.1007/s12021-021-09519-6 · Cited by 38 · see citing works
Guo, X., Zhai, G., Liu, J., Cao, Y., Zhang, X., Cui, D., & Gao, L. (2022) · Molecular Autism · doi:10.1186/s13229-022-00535-0 · Cited by 44 · see citing works
Keehn, R. J. J., Nair, S., Pueschel, E. B., Linke, A. C., Fishman, I., & Müller, R. (2018) · Cerebral Cortex · doi:10.1093/cercor/bhy201 · Cited by 43 · see citing works
Liu, G., Shi, L., Qiu, J., & Lu, W. (2022) · Molecular Autism · doi:10.1186/s13229-022-00489-3 · Cited by 40 · see citing works
Rasero, J., Jiménez-Marín, A., Diez, I. P., Toro, R., Hasan, M. T., & Cortés, J. M. (2023) · Biological Psychiatry · doi:10.1016/j.biopsych.2023.04.014 · Cited by 39 · see citing works
Functional connectivity subtypes associate robustly with ASD diagnosis
Urchs, S. G., Tam, A., Orban, P., Moreau, C., Benhajali, Y., Nguyen, H. D., Evans, A. C., & Bellec, P. (2022) · eLife · doi:10.7554/elife.56257 · Cited by 37 · see citing works
Autistic traits in synaesthesia: atypical sensory sensitivity and enhanced perception of details
van Leeuwen, T. M., van Petersen, E., Burghoorn, F., Dingemanse, M., & van Lier, R. (2019) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2019.0024 · Cited by 36 · see citing works
Wen, J., Antoniades, M., Yang, Z., Hwang, G., Skampardoni, I., Wang, R., & Davatzikos, C. A. (2024) · Biological Psychiatry · doi:10.1016/j.biopsych.2024.04.017 · Cited by 34 · see citing works
Rogala, J., Żygierewicz, J., Malinowska, U., Cygan, H. B., Stawicka, E., Kobus, A., & Vanrumste, B. (2023) · Scientific Reports · doi:10.1038/s41598-023-49048-7 · Cited by 33 · see citing works
Genesis, modelling and methodological remedies to autism heterogeneity
Rabot, J., Rødgaard, E.-M., Joober, R., Dumas, G., Bzdok, D., Bernhardt, B., Jacquemont, S., & Mottron, L. (2023) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2023.105201 · Cited by 31 · see citing works
Subtyping Autism Spectrum Disorder Via Joint Modeling of Clinical and Connectomic Profiles
Reardon, A. M., Li, K., Langley, J. A., & Hu, X. P. (2021) · Brain Connectivity · doi:10.1089/brain.2020.0997 · Cited by 32 · see citing works
Towards an accurate autism spectrum disorder diagnosis: multiple connectome views from fMRI data
Yang, J., Xu, X., Sun, M., Ruan, Y., Sun, C., Li, W., & Gao, X. (2023) · Cerebral Cortex · doi:10.1093/cercor/bhad477 · Cited by 32 · see citing works
A survey of brain functional network extraction methods using fMRI data
Du, Y., Fang, S., He, X., & Calhoun, V. D. (2024) · Trends in Neurosciences · doi:10.1016/j.tins.2024.05.011 · Cited by 32 · see citing works
Deep Learning Approached Features for ASD Classification using SVM
Ahmed, M. R., Ahammed, M. S., Niu, S., & Zhang, Y. (2020) · International Conference on Artificial Intelligence and Information Systems (ICAIIS) · doi:10.1109/icaiis49377.2020.9194791 · Cited by 30 · see citing works
Analysing brain networks in population neuroscience: a case for the Bayesian philosophy
Bzdok, D., Floris, D. L., & Marquand, A. F. (2020) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2019.0661 · Cited by 28 · see citing works
Oliver, L. D., Hawco, C. S., Homan, P., Lee, J., Green, M. F., Gold, J. M., DeRosse, P., Árgyelán, M., Malhotra, A. K., Buchanan, R. W., et al. (2020) · Biological Psychiatry Cognitive Neuroscience and Neuroimaging · doi:10.1016/j.bpsc.2020.11.014 · Cited by 29 · see citing works
Choi, H., Byeon, K., Park, B., Lee, J., Valk, S. L., Bernhardt, B. C., Martino, A. D., Milham, M. P., Hong, S., & Park, H. (2022) · NeuroImage · doi:10.1016/j.neuroimage.2022.119212 · Cited by 29 · see citing works
Liu, M., Liu, X., Hildebrandt, A., & Zhou, C. (2020) · Cerebral Cortex Communications · doi:10.1093/texcom/tgaa015 · Cited by 28 · see citing works
Choi, E. J., Vandewouw, M. M., Taylor, M. J., Arnold, P. D., Brian, J. A., Crosbie, J., Kelley, E. A., Lai, M., Liu, X., Schachar, R. J., et al. (2020) · NeuroImage Clinical · doi:10.1016/j.nicl.2020.102476 · Cited by 25 · see citing works
Connectome-based fingerprinting: reproducibility, precision, and behavioral prediction
Ramduny, J., & Kelly, C. A. M. (2024) · Neuropsychopharmacology · doi:10.1038/s41386-024-01962-8 · Cited by 23 · see citing works
The Future of Disentangling the Heterogeneity of Autism With Neuroimaging Studies
Duan, X., Shan, X., Uddin, L. Q., & Chen, H. (2024) · Biological Psychiatry · doi:10.1016/j.biopsych.2024.08.008 · Cited by 25 · see citing works
Hawco, C. S., Dickie, E. W., Jacobs, G. R., Daskalakis, Z. J., & Voineskos, A. N. (2021) · NeuroImage · doi:10.1016/j.neuroimage.2021.117823 · Cited by 21 · see citing works
Subtyping Brain Diseases from Imaging Data
Wen, J., Varol, E., Yang, Z., Hwang, G., Dwyer, D., Kazerooni, A. F., Lalousis, P. A., & Davatzikos, C. A. (2023) · Neuromethods · doi:10.1007/978-1-0716-3195-9_16 · Cited by 18 · see citing works
Alpha connectivity and inhibitory control in adults with autism spectrum disorder
Yuk, V., Dunkley, B. T., Anagnostou, E. A., & Taylor, M. J. (2020) · Molecular Autism · doi:10.1186/s13229-020-00400-y · Cited by 19 · see citing works
Predictive modeling of neurobehavioral state and trait variation across development
Sanchez–Alonso, S., & Aslin, R. Ν. (2020) · Developmental Cognitive Neuroscience · doi:10.1016/j.dcn.2020.100855 · Cited by 14 · see citing works
Connectome sorting by consensus clustering increases separability in group neuroimaging studies
Rasero, J., Diez, I. P., Cortés, J. M., Marinazzo, D., & Stramaglia, S. (2018) · Network Neuroscience · doi:10.1162/netn_a_00074 · Cited by 11 · see citing works
Contreras, R. C., Viana, M. S., Bernardino, V. J. S., dos Santos, F. L., Toygar, Ö., & Guido, R. C. (2025) · Scientific Reports · doi:10.1038/s41598-025-97708-7 · Cited by 10 · see citing works
RetractedKahathuduwa, C. N., West, B. D., & Mastergeorge, A. M. (2019) · Journal of Autism and Developmental Disorders · doi:10.1007/s10803-019-04187-7 · Cited by 9 · see citing works
Tang, S., Sun, N., Floris, D. L., Zhang, X., Martino, A. D., & Yeo, B. T. T. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/692772 · Cited by 9 · see citing works
Schröder, Y., Hohmann, D. M., Meller, T., Evermann, U., Pfarr, J., Jansen, A., Kamp‐Becker, I., Grezellschak, S., & Nenadić, I. (2021) · European Psychiatry · doi:10.1192/j.eurpsy.2021.15 · Cited by 8 · see citing works
Towards Neurosubtypes in AutismPreprint
Hong, S., Vogelstein, J. T., Gozzi, A., Bernhardt, B. C., Yeo, B. T. T., Milham, M. P., & Martino, A. D. (2019) · doi:10.31234/osf.io/8az69 · Cited by 8 · see citing works
Jemima, D. D., Selvarani, A. G., & Lovenia, J. D. L. (2025) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2025.1485286 · Cited by 7 · see citing works
Differentiated Approach to Pharmacotherapy of Autism Spectrum Disorders: Biochemical Aspects
Бокша, И. С., Prokhorova, T. A., Терешкина, Е. Б., Savushkina, O. K., & Burbaeva, G. S. (2023) · Biochemistry (Moscow) · doi:10.1134/s0006297923030021 · Cited by 6 · see citing works
Brown, R. E. (2022) · The EuroBiotech Journal · doi:10.2478/ebtj-2022-0008 · Cited by 5 · see citing works
Xu, G., Geng, G., Wang, A., Li, Z., Liu, Z., Liu, Y., Hu, J., Wang, W., & Li, X. (2024) · Autism Research · doi:10.1002/aur.3183 · Cited by 5 · see citing works
Shen, Z., & Yu, C. (2025) · Brain Sciences · doi:10.3390/brainsci15080890 · Cited by 7 · see citing works
Choi, H., Byeon, K., Lee, J., Hong, S., Park, B., & Park, H. (2024) · Human Brain Mapping · doi:10.1002/hbm.26581 · Cited by 4 · see citing works
Qiao, J., Yan, H., Wang, Z., Zhang, G., & Xu, G. (2025) · Journal of Autism and Developmental Disorders · doi:10.1007/s10803-025-06931-8 · Cited by 4 · see citing works
Clarke, N., Urchs, S., Nguyen, H., Moreau, C. A., Dansereau, C., Tam, A., Evans, A. C., & Bellec, L. (2025) · GigaScience · doi:10.1093/gigascience/giaf091 · Cited by 2 · see citing works
Disentangling disorder-specific variation is key for precision psychiatry in autism
Aglinskas, A., Schwartz, E., & Anzellotti, S. (2023) · Frontiers in Behavioral Neuroscience · doi:10.3389/fnbeh.2023.1121017 · Cited by 3 · see citing works
Delineating a Pathway for the Discovery of Functional Connectome Biomarkers of Autism
Park, S., Thomson, P., Kiar, G., Castellanos, F. X., Milham, M. P., Bernhardt, B. C., & Martino, A. D. (2024) · Advances in neurobiology · doi:10.1007/978-3-031-69491-2_18 · Cited by 3 · see citing works
Choi, H., Byeon, K., Lee, J., Hong, S., Park, B., & Park, H. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.03.03.482759 · Cited by 3 · see citing works
Autistic traits in synaesthesia: atypical sensory sensitivity and enhanced perception of detailsPreprint
van Leeuwen, T. M., van Petersen, E., Burghoorn, F., Dingemanse, M., & van Lier, R. (2019) · doi:10.31234/osf.io/vbc68 · Cited by 3 · see citing works
Wang, Y., Chen, Z., Song, P., Lam, G. Y. H., Kang, X., Wong, P. C. M., & Geng, X. (2025) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/j.pnpbp.2025.111452 · Cited by 2 · see citing works
Xue, Y., Yu, Z., Bai, M., Dong, H., Feng, J., & Jia, F.-Y. (2026) · BMC Psychiatry · doi:10.1186/s12888-026-07841-4 · Cited by 2 · see citing works
The many-to-many problem of endophenotypes in psychiatry - a biological perspective
Dukart, J., Lotter, L. D., Paquola, C., Eickhoff, S. B., & Schilbach, L. (2026) · Molecular Psychiatry · doi:10.1038/s41380-026-03473-y · Cited by 2 · see citing works
Bhavna, K., Sharma, S., & Rosado-Muñoz, A. (2026) · Neurocomputing · doi:10.1016/j.neucom.2026.133145 · Cited by 2 · see citing works
Wegmann, B., Lundquist, A., Eklund, A., & Villani, M. (2024) · Journal of the Royal Statistical Society Series C (Applied Statistics) · doi:10.1093/jrsssc/qlae014 · Cited by 2 · see citing works
Blind Subgrouping of Task-based FMRI
Fisher, Z. F., Parsons, J., Gates, K. M., & Hopfinger, J. B. (2023) · Psychometrika · doi:10.1007/s11336-023-09907-8 · Cited by 2 · see citing works
Urchs, S. G. W., Nguyen, H. D., Moreau, C. A., Dansereau, C. L., Tam, A., Evans, A. C., & Bellec, P. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.06.01.127688 · Cited by 2 · see citing works
Group Integrative Dynamic Factor Models With Application to Multiple Subject Brain Connectivity
Kim, Y., Fisher, Z. F., & Pipiras, V. (2024) · Biometrical Journal · doi:10.1002/bimj.202300370 · Cited by 1 · see citing works
Li, X., Xu, G., Geng, G., Wang, W., Hu, J., Li, Z., & Li, S. (2025) · CNS Neuroscience & Therapeutics · doi:10.1002/cns.70675 · Cited by 1 · see citing works
Jiang, H., Rodríguez‐Cruces, R., Xie, K., Kebets, V., Wang, Y., Weber, C. F., He, Y., Kember, J., Sweatman, H., Tabuenca, Z. G., et al. (2026) · NeuroImage · doi:10.1016/j.neuroimage.2026.121775 · Cited by 1 · see citing works
Chen, R., Lee, K., & Herskovits, E. H. (2020) · The Neuroradiology Journal · doi:10.1177/1971400920950694 · Cited by 1 · see citing works
Rasero, J., Jiménez-Marín, A., Diez, I. P., Hasan, M. T., & Cortés, J. M. (2020) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2020.09.18.304055 · Cited by 1 · see citing works
Analyzing Brain Circuits in Population Neuroscience: A Case to Be a BayesianPreprint
Bzdok, D., Floris, D. L., & Marquand, A. F. (2019) · arXiv (Cornell University) · doi:10.48550/arxiv.1909.02527
Benhajali, Y., Badhwar, A., Urchs, S. G. W., Moreau, C. A., Chouinard-Decorte, F., Vainik, U., Ferré, P., Orban, P., Pérusse, D., & Bellec, P. (2020) · doi:10.31234/osf.io/excdq
Structural connectivity-based subtyping of healthy individuals using elastic net subspace clustering
Liu, W., Wang, Y., He, Y., Wu, J., & Geng, X. (2022) · SPIE Medical Imaging: Image Processing · doi:10.1117/12.2613324
Roy, A., Rivas, P., & Tayba, M. N. (2022) · International Conference on Computational Science and Computational Intelligence (CSCI) · doi:10.1109/csci58124.2022.00014
Neurodevelopmental Aspects of Behavioural Differences II. Autism Spectrum Disorder (ASD)
Stevenson, J. (2023) · Springer eBooks · doi:10.1007/978-3-031-45787-6_10
Differentiated approach to the pharmacotherapy of autism spectrum disorders: biochemical aspects
Бокша, И. С., Prokhorova, T. A., Savushkina, O. K., Терешкина, Е. Б., & Burbaeva, G. S. (2023) · Biochemistry (Moscow) · doi:10.31857/s0320972523030028
Guo, X., Xing, Y., Cui, D., Zhou, R., & Gao, L. (2025) · Brain Connectivity · doi:10.1089/brain.2024.0033
Yuk, V., Dunkley, B. T., Anagnostou, E. A., & Taylor, M. J. (2020) · Figshare · doi:10.6084/m9.figshare.13347064
Yuk, V., Dunkley, B. T., Anagnostou, E. A., & Taylor, M. J. (2020) · Figshare · doi:10.6084/m9.figshare.13347058
Yuk, V., Dunkley, B. T., Anagnostou, E. A., & Taylor, M. J. (2020) · Figshare · doi:10.6084/m9.figshare.13347070
Garcés, P., Baumeister, S., Mason, L., Chatham, C. H., Holiga, Š., Dukart, J., Jones, E. J. H., Banaschewski, T., Baron‐Cohen, S., Bölte, S., et al. (2022) · Figshare · doi:10.6084/m9.figshare.19793415
Guo, X., Zhai, G., Liu, J., Cao, Y., Zhang, X., Cui, D., & Gao, L. (2024) · Figshare · doi:10.6084/m9.figshare.26557583
Yuk, V., Dunkley, B. T., Anagnostou, E. A., & Taylor, M. J. (2020) · Figshare · doi:10.6084/m9.figshare.13347061
Yuk, V., Dunkley, B. T., Anagnostou, E. A., & Taylor, M. J. (2020) · Figshare · doi:10.6084/m9.figshare.13347067
Geng, G., Xu, G., Li, S., Zhu, Z., Liu, Z., Liu, Y., Wang, X. C., & Li, X. (2026) · Journal of Autism and Developmental Disorders · doi:10.1007/s10803-026-07217-3
Wu, S., Huang, M., Huang, D., Linli, Z., & Guo, S.-X. (2026) · International Journal of Developmental Neuroscience · doi:10.1002/jdn.70120
Low, Z. X. B. (2026) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/j.pnpbp.2026.111717
Functional Brain Asymmetry Reveals Heterogeneous Subtypes in Autism Spectrum Disorder
Kim, C. Y., Kim, S., & Park, B. J. (2026) · Autism Research · doi:10.1002/aur.70304
Singh, D. P., Banerjee, T., Durai, C. A. D., Shukla, S., Gadipelli, P., Charan, P., Malhotra, D., Dharamvir, Singh, R., Narayan, Y., et al. (2026) · International Journal of Developmental Neuroscience · doi:10.1002/jdn.70158
Su, X., Ge, J., & Yang, X. (2026) · Behavioral Sciences · doi:10.3390/bs16091616
Nayak, S., Gudigar, A., Raghavendra, U., Yeong, C. H., Inamdar, M. A., Hegde, A., & Salvi, M. (2026) · F1000Research · doi:10.12688/f1000research.189583.1
Guo, X., Wang, J., Wang, Y., Zhou, R., & Gao, L. (2026) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/j.pnpbp.2026.111962
- Authors
- Easson, A. K., Fatima, Z., & McIntosh, A. R.
- Affiliations
- University of Toronto (CA)
- York University (CA)
- Venue
- Network Neuroscience
- Publisher
- MIT Press
- Published
- 2019-01
- Volume
- 3
- Issue
- 2
- Pages
- 344-362
- ISSN
- 2472-1751 (ISSN-L)
- PMC
- PMC6370474
- OpenAlex
- W2951318815
- Cited by
- 95
- References
- 67
- Citations by year
- 2026: 13 · 2025: 8 · 2024: 10 · 2023: 11 · 2022: 14 · 2021: 6 · 2020: 19 · 2019: 11 · 2018: 3
- FWCI
- 5.81
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- cc-by
- Locations
- Network Neuroscience (publishedVersion, cc-by)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
- Europe PMC (PubMed Central) (publishedVersion, other-oa)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Funders
- Natural Sciences and Engineering Research Council of Canada (RGPIN-2018-04457)
- Ontario Graduate Scholarship
- Mynne & Harold Soupcoff Fellowship
- Finkler Graduate Student Fellowship
- Topics
- Life Sciences › Neuroscience › Cognitive Neuroscience › Autism Spectrum Disorder Research
- Life Sciences › Neuroscience › Cognitive Neuroscience › Functional Brain Connectivity Studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
- Keywords
- autism spectrum disorder, functional connectivity, resting-state networks, brain-behavior relationship, default mode network, cingulo-opercular network, sensorimotor network, social responsiveness, IQ, ASD severity, dimensional approach
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