Molecular Mechanisms of Sleep and Wakefulness
Abstract
Major questions on the biology of sleep include the following: what are the molecular functions of sleep; why can wakefulness only be sustained for defined periods before there is behavioral impairment; what genes contribute to the individual differences in sleep and the response to sleep deprivation? Behavioral criteria to define sleep have facilitated identification of sleep states in a number of different model systems: Drosophila, zebrafish, and Caenorhabditis elegans. Each system has unique strengths. Studies in these model systems are identifying conserved signaling mechanisms regulating sleep that are present in mammals. For example, the PKA-CREB signaling mechanism promotes wakefulness in Drosophila, mice, and C. elegans. Microarray studies indicate that genes whose expression is upregulated during sleep are involved in macromolecule biosynthesis (proteins, lipids [including cholesterol], heme). Thus, a key function of sleep is likely to be macromolecule synthesis. Moreover, in all species studied to date, there is upregulation of the molecular chaperone BiP with extended wakefulness. Sleep deprivation leads to cellular ER stress in brain and the unfolded protein response. Identification of genes regulating sleep has the potential for translational studies to elucidate the genetics of sleep and response to sleep deprivation in humans.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Sleep is an emergent set of many physiologic processes under primarily neurobiological regulation that impact many physiologic systems.
“Sleep represents an emergent set of many physiologic processes under primarily neurobiological regulation that impact many physiologic systems.”
From Sleep, Health, and Society (2017) · cites this paper as [3]
Cites
Lipid rafts and signal transduction
Simons, K., & Toomre, D. K. (2000) · Nature Reviews Molecular Cell Biology · doi:10.1038/35036052 · Cited by 6,252 · see citing works
Two-Process Model of Sleep Regulation
Binder, M. D., Hirokawa, N., & Windhorst, U. (2008) · Springer eBooks · doi:10.1007/978-3-540-29678-2_6166 · Cited by 3,895 · see citing works
Thalamocortical oscillations in the sleeping and aroused brain
Steriade, M., McCormick, D. A., & Sejnowski, T. J. (1993) · Science · doi:10.1126/science.8235588 · Cited by 3,564 · see citing works
Narcolepsy in orexin Knockout Mice
Chemelli, R. M., Willie, J. T., Sinton, C. M., Elmquist, J. K., Scammell, T., Lee, C., Richardson, J. A., Williams, S. C., Xiong, Y., Kisanuki, Y., et al. (1999) · Cell · doi:10.1016/s0092-8674(00)81973-x · Cited by 3,095 · see citing works
THE MAMMALIAN UNFOLDED PROTEIN RESPONSE
Schröder, M., & Kaufman, R. J. (2005) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.73.011303.074134 · Cited by 3,035 · see citing works
Molecular Bases for Circadian Clocks
Dunlap, J. C. (1999) · Cell · doi:10.1016/s0092-8674(00)80566-8 · Cited by 2,900 · see citing works
Dynamic interaction of BiP and ER stress transducers in the unfolded-protein response
Bertolotti, A., Zhang, Y., Hendershot, L. M., Harding, H. P., & Ron, D. (2000) · Nature Cell Biology · doi:10.1038/35014014 · Cited by 2,871 · see citing works
Sleep function and synaptic homeostasis
Tononi, G., & Cirelli, C. (2006) · Sleep Medicine Reviews · doi:10.1016/j.smrv.2005.05.002 · Cited by 2,151 · see citing works
A gene expression atlas of the central nervous system based on bacterial artificial chromosomes
Gong, S., Zheng, C., Doughty, M. L., Losos, K., Didkovsky, N., Schambra, U. B., Nowak, N. J., Joyner, A., Leblanc, G., Hatten, M. E., et al. (2003) · Nature · doi:10.1038/nature02033 · Cited by 2,108 · see citing works
ER stress and the unfolded protein response
Schröder, M., & Kaufman, R. J. (2004) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2004.06.056 · Cited by 1,750 · see citing works
The sleep switch: hypothalamic control of sleep and wakefulness
Saper, C. B., Chou, T. C., & Scammell, T. E. (2001) · Trends in Neurosciences · doi:10.1016/s0166-2236(00)02002-6 · Cited by 1,656 · see citing works
Sleep Homeostasis and Models of Sleep Regulation
Borb, A. A., & Achermann, P. (1999) · Journal of Biological Rhythms · doi:10.1177/074873099129000894 · Cited by 1,503 · see citing works
Genetic variants and strains of the laboratory mouse
(1990) · Choice Reviews Online · doi:10.5860/choice.28-1324 · Cited by 1,492 · see citing works
Genetic Ablation of Orexin Neurons in Mice Results in Narcolepsy, Hypophagia, and Obesity
Hara, J., Beuckmann, C. T., Nambu, T., Willie, J. T., Chemelli, R. M., Sinton, C. M., Sugiyama, F., Yagami, K.-I., Goto, K., Yanagisawa, M., et al. (2001) · Neuron · doi:10.1016/s0896-6273(01)00293-8 · Cited by 1,401 · see citing works
Sleep Disorders and Sleep Deprivation: An Unmet Public Health Problem
(2006) · PsycEXTRA Dataset · doi:10.1037/e719732007-001 · Cited by 1,333 · see citing works
Correlates of Sleep and Waking in Drosophila melanogaster
Shaw, P. J., Cirelli, C., Greenspan, R. J., & Tononi, G. (2000) · Science · doi:10.1126/science.287.5459.1834 · Cited by 1,300 · see citing works
Sleep and synaptic homeostasis: a hypothesis
Tononi, G., & Cirelli, C. (2003) · Brain Research Bulletin · doi:10.1016/j.brainresbull.2003.09.004 · Cited by 1,217 · see citing works
Homer: a protein that selectively binds metabotropic glutamate receptors
Brakeman, P., Lanahan, A. A., O’Brien, R., Roche, K. W., Barnes, C. A., Huganir, R. L., & Worley, P. F. (1997) · Nature · doi:10.1038/386284a0 · Cited by 1,115 · see citing works
Activation of ventrolateral preoptic neurons during sleep
Sherin, J. E., Shiromani, P. J., McCarley, R. W., & Saper, C. B. (1996) · Science · doi:10.1126/science.271.5246.216 · Cited by 1,111 · see citing works
Rest in Drosophila is a sleep-like state
Hendricks, J. C., Finn, S. M., Panckeri, K. A., Chavkin, J., Williams, J. A., Sehgal, A., & Pack, A. I. (2000) · Neuron · doi:10.1016/s0896-6273(00)80877-6 · Cited by 1,050 · see citing works
Self-citationOrchestrating the unfolded protein response in health and disease
Kaufman, R. J. (2002) · Journal of Clinical Investigation · doi:10.1172/jci0216886 · Cited by 1,015 · see citing works
Inducible gene targeting in mice using the Cre/lox system.
Sauer, B. (1998) · Methods · doi:10.1006/meth.1998.0593 · Cited by 858 · see citing works
Restoration of brain energy metabolism as the function of sleep
Benington, J. H., & Heller, H. C. (1995) · Progress in Neurobiology · doi:10.1016/0301-0082(94)00057-o · Cited by 828 · see citing works
Spatiotemporal Gene Expression Targeting with the TARGET and Gene-Switch Systems in Drosophila
McGuire, S. E., Mao, Z., & Davis, R. L. (2004) · Science s STKE · doi:10.1126/stke.2202004pl6 · Cited by 762 · see citing works
Sherin, J. E., Elmquist, J. K., Torrealba, F., & Saper, C. B. (1998) · Journal of Neuroscience · doi:10.1523/jneurosci.18-12-04705.1998 · Cited by 746 · see citing works
Zebrafish: a model system for the study of human disease
Dooley, K. A. (2000) · Current Opinion in Genetics & Development · doi:10.1016/s0959-437x(00)00074-5 · Cited by 745 · see citing works
Altered circadian activity rhythms and sleep in mice devoid of prion protein
Tobler, I., Gaus, S. E., Deboer, T., Achermann, P., Fischer, M. S., Rülicke, T., Moser, M., Oesch, B., McBride, P. A., & Manson, J. C. (1996) · Nature · doi:10.1038/380639a0 · Cited by 662 · see citing works
Xiao, B., Tu, J. C., Petralia, R. S., Yuan, J. P., Doan, A., Breder, C. D., Ruggiero, A. M., Lanahan, A. A., Wenthold, R. J., & Worley, P. F. (1998) · Neuron · doi:10.1016/s0896-6273(00)80588-7 · Cited by 649 · see citing works
Extensive and divergent effects of sleep and wakefulness on brain gene expression
Cirelli, C., Gutierrez, C. M., & Tononi, G. (2004) · Neuron · doi:10.1016/s0896-6273(03)00814-6 · Cited by 627 · see citing works
The Comprehensive Knockout Mouse Project Consortium (2004) · Nature Genetics · doi:10.1038/ng0904-921 · Cited by 608 · see citing works
Lipid Rafts in the Maintenance of Synapses, Dendritic Spines, and Surface AMPA Receptor Stability
Hering, H., Lin, C.-C., & Sheng, M. (2003) · Journal of Neuroscience · doi:10.1523/jneurosci.23-08-03262.2003 · Cited by 602 · see citing works
Signaling the Unfolded Protein Response from the Endoplasmic Reticulum
Zhang, K., & Kaufman, R. J. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.r400008200 · Cited by 580 · see citing works
The Homeostatic Regulation of Sleep Need Is under Genetic Control
Franken, P., Chollet, D., & Tafti, M. (2001) · Journal of Neuroscience · doi:10.1523/jneurosci.21-08-02610.2001 · Cited by 551 · see citing works
Lethargus is a Caenorhabditis elegans sleep-like state
Raizen, D. M., Zimmerman, J. E., Maycock, M. H., Ta, U. D., You, Y.-J., Sundaram, M. V., & Pack, A. I. (2008) · Nature · doi:10.1038/nature06535 · Cited by 536 · see citing works
Self-citationHypocretin/orexin overexpression induces an insomnia-like phenotype in zebrafish
Prober, D. A., Rihel, J., Onah, A. A., Sung, R.-J., & Schier, A. F. (2006) · The Journal of Neuroscience · doi:10.1523/jneurosci.4332-06.2006 · Cited by 508 · see citing works
Reduced sleep in Drosophila Shaker mutants
Cirelli, C., Bushey, D., Hill, S., Huber, R., Kreber, R. A., Ganetzky, B., & Tononi, G. (2005) · Nature · doi:10.1038/nature03486 · Cited by 474 · see citing works
Endoplasmic Reticulum Stress and the Development of Diabetes
Harding, H. P., & Ron, D. (2002) · Diabetes · doi:10.2337/diabetes.51.2007.s455 · Cited by 465 · see citing works
Analysing complex genetic traits with chromosome substitution strains
Nadeau, J. H., Singer, J. B., Matin, A., et al. (2000) · Nature Genetics · doi:10.1038/73427 · Cited by 462 · see citing works
Identification of Wake-Active Dopaminergic Neurons in the Ventral Periaqueductal Gray Matter
Lu, J., Jhou, T. C., & Saper, C. B. (2006) · Journal of Neuroscience · doi:10.1523/jneurosci.2244-05.2006 · Cited by 458 · see citing works
The nature and identification of quantitative trait loci: a community's view
Members of the Complex Trait Consortium (2003) · Nature Reviews Genetics · doi:10.1038/nrg1206 · Cited by 437 · see citing works
Melatonin promotes sleep-like state in zebrafish
Zhdanova, I. V., Wang, S. Y., Leclair, O. U., & Danilova, N. P. (2001) · Brain Research · doi:10.1016/s0006-8993(01)02444-1 · Cited by 418 · see citing works
Ango, F., Prézeau, L., Müller, T. H., Tu, J. C., Xiao, B., Worley, P. F., Pin, J., Bockaert, J., & Fagni, L. (2001) · Nature · doi:10.1038/35082096 · Cited by 410 · see citing works
Homeostatic, circadian, and emotional regulation of sleep
Saper, C. B., Cano, G., & Scammell, T. E. (2005) · The Journal of Comparative Neurology · doi:10.1002/cne.20770 · Cited by 405 · see citing works
Characterization of Sleep in Zebrafish and Insomnia in Hypocretin Receptor Mutants
Yokogawa, T., Marin, W., Faraco, J. H., Pézeron, G., Appelbaum, L., Zhang, J., Rosa, F., Mourrain, P., & Mignot, E. J.-M. (2007) · PLoS Biology · doi:10.1371/journal.pbio.0050277 · Cited by 402 · see citing works
Hümmler, E., Cole, T. J., Blendy, J. A., Ganß, R., Aguzzi, A., Schmid, W., Beermann, F., & Schütz, G. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.12.5647 · Cited by 389 · see citing works
Macromolecule biosynthesis: a key function of sleep
Mackiewicz, M., Shockley, K. R., Romer, M. A., Galante, R. J., Zimmerman, J. E., Naidoo, N. N., Baldwin, D. A., Jensen, S. T., Churchill, G. A., & Pack, A. I. (2007) · Physiological Genomics · doi:10.1152/physiolgenomics.00275.2006 · Cited by 378 · see citing works
Self-citationThe Circadian<i>Clock</i>Mutation Alters Sleep Homeostasis in the Mouse
Naylor, E., Bergmann, B. M., Krauski, K., Zee, P. C., Takahashi, J. S., Vitaterna, M. H., & Turek, F. W. (2000) · The Journal of Neuroscience · doi:10.1523/jneurosci.20-21-08138.2000 · Cited by 367 · see citing works
Homer1a is a core brain molecular correlate of sleep loss
Maret, S., Dorsaz, S., Gurcel, L., Pradervand, S., Petit, B., Pfister, C., Hagenbüchle, O., O’Hara, B. F., Franken, P., & Tafti, M. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0710131104 · Cited by 366 · see citing works
Cirelli, C., & Tononi, G. (2000) · Brain Research · doi:10.1016/s0006-8993(00)03008-0 · Cited by 365 · see citing works
Festing, M. F. W. (1979) · doi:10.1007/978-1-349-03816-9_10 · Cited by 354 · see citing works
Genetic Dissection of Complex Traits with Chromosome Substitution Strains of Mice
Singer, J. B., Hill, A. E., Burrage, L. C., Olszens, K. R., Song, J., Justice, M. J., O’Brien, W. E., Conti, D. V., Witte, J. S., Lander, E. S., et al. (2004) · Science · doi:10.1126/science.1093139 · Cited by 347 · see citing works
Dorner, A. J., Wasley, L. C., & Kaufman, R. J. (1992) · The EMBO Journal · doi:10.1002/j.1460-2075.1992.tb05201.x · Cited by 342 · see citing works
Shiraishi‐Yamaguchi, Y., & Furuichi, T. (2007) · Genome biology · doi:10.1186/gb-2007-8-2-206 · Cited by 324 · see citing works
Gene Expression Nervous System Atlas (GENSAT)
Heintz, N. (2004) · Nature Neuroscience · doi:10.1038/nn0504-483 · Cited by 323 · see citing works
Sleep EEG in the rat as a function of prior waking
Tobler, I., & Borbély, A. A. (1986) · Electroencephalography and Clinical Neurophysiology · doi:10.1016/0013-4694(86)90044-1 · Cited by 319 · see citing works
Sleep and Sleep Regulation in Normal and Prion Protein-Deficient Mice
Tobler, I., Deboer, T., & Fischer, M. (1997) · Journal of Neuroscience · doi:10.1523/jneurosci.17-05-01869.1997 · Cited by 296 · see citing works
Novel Members of the Vesl/Homer Family of PDZ Proteins That Bind Metabotropic Glutamate Receptors
Kato, A., Ozawa, F., Saitoh, Y., Fukazawa, Y., Sugiyama, H., & Inokuchi, K. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.37.23969 · Cited by 280 · see citing works
Rat genetics: attachign physiology and pharmacology to the genome
Jacob, H. J., & Kwitek, A. E. (2002) · Nature Reviews Genetics · doi:10.1038/nrg702 · Cited by 274 · see citing works
Genetics and molecular biology of rhythms in Drosophila and other insects
Hall, J. C. (2003) · Advances in genetics · doi:10.1016/s0065-2660(03)48000-0 · Cited by 267 · see citing works
Endogenous sleep-promoting substances and sleep regulation
Borbely, A. A., & Tobler, I. (1989) · Physiological Reviews · doi:10.1152/physrev.1989.69.2.605 · Cited by 259 · see citing works
Effect of impulse blockage on cytochrome oxidase activity in monkey visual system
Wong‐Riley, M. T. T., & Carroll, E. W. (1984) · Nature · doi:10.1038/307262a0 · Cited by 243 · see citing works
Role of Molecular Oscillations in Generating Behavioral Rhythms in Drosophila
Yang, Z., & Sehgal, A. (2001) · Neuron · doi:10.1016/s0896-6273(01)00218-5 · Cited by 240 · see citing works
Novel method for high-throughput phenotyping of sleep in mice
Pack, A. I., Galante, R. J., Maislin, G., Cater, J. R., Metaxas, D., Lu, S., Zhang, L., Smith, R. V., Kay, T., Lian, J., et al. (2006) · Physiological Genomics · doi:10.1152/physiolgenomics.00139.2006 · Cited by 234 · see citing works
Self-citationA non-circadian role for cAMP signaling and CREB activity in Drosophila rest homeostasis
Hendricks, J. C., Williams, J. A., Panckeri, K. A., Kirk, D., Tello-Ruiz, M. K., Yin, J. C. P., & Sehgal, A. (2001) · Nature Neuroscience · doi:10.1038/nn743 · Cited by 231 · see citing works
Exploratory Behavior, Cortical BDNF Expression, and Sleep Homeostasis
Huber, R., Tononi, G., & Cirelli, C. (2007) · Sleep · doi:10.1093/sleep/30.2.129 · Cited by 224 · see citing works
The Rat as an Experimental Animal
Gill, T. J., Smith, G. J., Wissler, R. W., & Kunz, H. W. (1989) · Science · doi:10.1126/science.2665079 · Cited by 224 · see citing works
Sleep deprivation induces the unfolded protein response in mouse cerebral cortex
Naidoo, N. N., Giang, W., Galante, R. J., & Pack, A. I. (2005) · Journal of Neurochemistry · doi:10.1111/j.1471-4159.2004.02952.x · Cited by 215 · see citing works
Self-citationShen, Y., Meunier, L., & Hendershot, L. M. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m112214200 · Cited by 215 · see citing works
Molecular Components of the Circadian System in Drosophila
Williams, J. A., & Sehgal, A. (2001) · Annual Review of Physiology · doi:10.1146/annurev.physiol.63.1.729 · Cited by 211 · see citing works
Brain-Derived Neurotrophic Factor Modulates Cerebellar Plasticity and Synaptic Ultrastructure
Carter, A. R., Chen, C., Schwartz, P. M., & Segal, R. A. (2002) · Journal of Neuroscience · doi:10.1523/jneurosci.22-04-01316.2002 · Cited by 207 · see citing works
Altered sleep regulation in leptin-deficient mice
Laposky, A. D., Shelton, J., Bass, J., Dugovic, C., Perrino, N., & Turek, F. W. (2006) · American Journal of Physiology-Regulatory, Integrative and Comparative Physiology · doi:10.1152/ajpregu.00304.2005 · Cited by 203 · see citing works
Szymusiak, R. S., Gvilia, I., & McGinty, D. (2007) · Sleep Medicine · doi:10.1016/j.sleep.2007.03.013 · Cited by 200 · see citing works
Lee, J., Kim, D., & Shin, H. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0408089101 · Cited by 197 · see citing works
Functional genomics and rat models
Jacob, H. J. (1999) · Genome Research · doi:10.1101/gr.9.11.1013 · Cited by 190 · see citing works
The effect of 3-h and 6-h sleep deprivation on sleep and EEG spectra of the rat
Tobler, I., & Borbély, A. A. (1990) · Behavioural Brain Research · doi:10.1016/0166-4328(90)90161-7 · Cited by 183 · see citing works
Hypothalamic regulation of sleep and arousal
McGinty, D. (2003) · Frontiers in bioscience · doi:10.2741/1159 · Cited by 178 · see citing works
Wisor, J. P., Edgar, D. M., Yesavage, J. A., Ryan, H. S., McCormick, C. M., Lapustea, N., & Murphy, G. M. (2005) · Neuroscience · doi:10.1016/j.neuroscience.2004.11.018 · Cited by 169 · see citing works
Butchbach, M. E. R., Tian, G., Guo, H., & Lin, C. G. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m403938200 · Cited by 166 · see citing works
Essentials of Sleep Recordings in Drosophila: Moving Beyond Sleep Time
Andretic, R., & Shaw, P. J. (2005) · Methods in enzymology on CD-ROM/Methods in enzymology · doi:10.1016/s0076-6879(05)93040-1 · Cited by 160 · see citing works
Sleep and wakefulness modulate gene expression in Drosophila
Cirelli, C., LaVaute, T. M., & Tononi, G. (2005) · Journal of Neurochemistry · doi:10.1111/j.1471-4159.2005.03291.x · Cited by 155 · see citing works
Effects of interleukin-1β on sleep are mediated by the type I receptor
Fang, J., Wang, Y., & Krueger, J. M. (1998) · American Journal of Physiology-Regulatory, Integrative and Comparative Physiology · doi:10.1152/ajpregu.1998.274.3.r655 · Cited by 152 · see citing works
The Transcription Factor DBP Affects Circadian Sleep Consolidation and Rhythmic EEG Activity
Franken, P., Lopez‐Molina, L., Marcacci, L., Schibler, U., & Tafti, M. (2000) · Journal of Neuroscience · doi:10.1523/jneurosci.20-02-00617.2000 · Cited by 149 · see citing works
Terao, A., Steininger, T. L., Hyder, K., Apte-Deshpande, A. D., Ding, J., Rishipathak, D., Davis, R. W., Heller, H. C., & Kilduff, T. S. (2003) · Neuroscience · doi:10.1016/s0306-4522(02)00695-4 · Cited by 148 · see citing works
Homeostatic Regulation of Sleep: A Role for Preoptic Area Neurons
Gvilia, I., Xu, F., McGinty, D., & Szymusiak, R. S. (2006) · Journal of Neuroscience · doi:10.1523/jneurosci.2012-06.2006 · Cited by 145 · see citing works
On the Functional Significance of c-fos Induction During the Sleep-waking Cycle
Cirelli, C., & Tononi, G. (2000) · SLEEP · doi:10.1093/sleep/23.4.9 · Cited by 139 · see citing works
Terao, A., Wisor, J. P., Peyron, C., Apte-Deshpande, A. D., Wurts, S. W., Edgar, D. M., & Kilduff, T. S. (2005) · Neuroscience · doi:10.1016/j.neuroscience.2005.08.059 · Cited by 137 · see citing works
The Rat Genome Database, update 2007--Easing the path from disease to data and back again
Twigger, S. N., Shimoyama, M. E., Bromberg, S. K., Kwitek, A. E., Jacob, H. J., & the RGD Team (2006) · Nucleic Acids Research · doi:10.1093/nar/gkl988 · Cited by 132 · see citing works
Sato, M., Suzuki, K., & Nakanishi, S. (2001) · Journal of Neuroscience · doi:10.1523/jneurosci.21-11-03797.2001 · Cited by 129 · see citing works
Flores, A. E., Flores, J. E., Deshpande, H., Picazo, J. A., Xie, X., Franken, P., Heller, H. C., Grahn, D. A., & O’Hara, B. F. (2007) · IEEE Transactions on Biomedical Engineering · doi:10.1109/tbme.2006.886938 · Cited by 127 · see citing works
Genetic Evidence for a Role of CREB in Sustained Cortical Arousal
Graves, L. A., Hellman, K. M., Veasey, S. C., Blendy, J. A., Pack, A. I., & Abel, T. G. (2003) · Journal of Neurophysiology · doi:10.1152/jn.00882.2002 · Cited by 124 · see citing works
Self-citationIdentifying novel genes for atherosclerosis through mouse-human comparative genetics.
Wang, X.-S., Ishimori, N., Korstanje, R., Rollins, J., & Paigen, B. (2005) · American Journal of Human Genetics · doi:10.1086/431656 · Cited by 123 · see citing works
The need for a simple animal model to understand sleep
Hendricks, J. C., Sehgal, A., & Pack, A. I. (2000) · Progress in Neurobiology · doi:10.1016/s0301-0082(99)00048-9 · Cited by 123 · see citing works
Self-citationPorter, R., Greene, J., Higgins, D. S., et al. (1994) · Journal of Neuroscience · doi:10.1523/jneurosci.14-11-07192.1994 · Cited by 122 · see citing works
Transposable elements as tools for genomics and genetics in Drosophila
Ryder, E. (2003) · Briefings in Functional Genomics and Proteomics · doi:10.1093/bfgp/2.1.57 · Cited by 122 · see citing works
Bioinformatics toolbox for narrowing rodent quantitative trait loci
DiPetrillo, K., Wang, X., Stylianou, I. M., & Paigen, B. J. (2005) · Trends in Genetics · doi:10.1016/j.tig.2005.09.008 · Cited by 121 · see citing works
Effect of forced locomotion on the rest-activity cycle of the cockroach
Tobler, I. (1983) · Behavioural Brain Research · doi:10.1016/0166-4328(83)90180-8 · Cited by 120 · see citing works
Consomic rat model systems for physiological genomics
Cowley, A. W., Liang, M., Roman, R. J., Greene, A. S., & Jacob, H. J. (2004) · Acta Physiologica Scandinavica · doi:10.1111/j.1365-201x.2004.01334.x · Cited by 116 · see citing works
Douglas, C. L., Vyazovskiy, V. V., Southard, T. L., Chiu, S. Y., Messing, A., Tononi, G., & Cirelli, C. (2007) · BMC Biology · doi:10.1186/1741-7007-5-42 · Cited by 115 · see citing works
Regulation of Hypocretin (Orexin) Expression in Embryonic Zebrafish
Faraco, J. H., Appelbaum, L., Marin, W., Gaus, S. E., Mourrain, P., & Mignot, E. J.-M. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m605811200 · Cited by 115 · see citing works
Behavioral analysis of CREB αΔ mutation on a B6/129 F1 hybrid background
Graves, L. A., Dalvi, A., Lucki, I., Blendy, J. A., & Abel, T. G. (2002) · Hippocampus · doi:10.1002/hipo.10003 · Cited by 109 · see citing works
Vila, M., Lévy, R., Herrero, M. T., Faucheux, B. A., Obeso, J. A., Agid, Y., & Hirsch, É. C. (1996) · Neuroscience · doi:10.1016/0306-4522(95)00549-8 · Cited by 106 · see citing works
Genoud, C., Knott, G. W., Sakata, K., Lu, B., & Welker, E. (2004) · Journal of Neuroscience · doi:10.1523/jneurosci.4040-03.2004 · Cited by 106 · see citing works
Multiple mechanisms limit the duration of wakefulness in Drosophila brain
Zimmerman, J. E., Rizzo, W., Shockley, K. R., Raizen, D. M., Naidoo, N. N., Mackiewicz, M., Churchill, G. A., & Pack, A. I. (2006) · Physiological Genomics · doi:10.1152/physiolgenomics.00030.2006 · Cited by 104 · see citing works
Self-citationEroğlu, Ç., Brügger, B., Wieland, F., & Sinning, I. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1737042100 · Cited by 100 · see citing works
Differences in gene expression between sleep and waking as revealed by mRNA differential display
Cirelli, C., & Tononi, G. (1998) · Molecular Brain Research · doi:10.1016/s0169-328x(98)00057-6 · Cited by 100 · see citing works
Sleep, sleep disorders and hypocretin (orexin)
Mignot, E. J.-M. (2004) · Sleep Medicine · doi:10.1016/s1389-9457(04)90001-9 · Cited by 99 · see citing works
A Role for the Molecular Chaperone Protein BiP/GRP78 in Drosophila Sleep Homeostasis
Naidoo, N. N., Casiano, V., Cater, J. R., Zimmerman, J. E., & Pack, A. I. (2007) · SLEEP · doi:10.1093/sleep/30.5.557 · Cited by 98 · see citing works
Self-citationAn action plan for mouse genomics
Battey, J. F., Jordan, E., Cox, D. R., & Dove, W. F. (1999) · Nature Genetics · doi:10.1038/5012 · Cited by 98 · see citing works
Cirelli, C., & Tononi (1999) · Journal of Sleep Research · doi:10.1046/j.1365-2869.1999.00008.x · Cited by 91 · see citing works
24‐h variation of vigilance in the cockroach Blaberus giganteus
Tobler, I., & Neuner‐Jehle, M. (1992) · Journal of Sleep Research · doi:10.1111/j.1365-2869.1992.tb00044.x · Cited by 88 · see citing works
Zebrafish as a Genomics Research Model
Chen, E. Y., & Ekker, S. C. (2004) · Current Pharmaceutical Biotechnology · doi:10.2174/1389201043376652 · Cited by 85 · see citing works
Initial Characterization of a Rat Model of Diabetic Nephropathy
Nóbrega, M. A., Fleming, S., Roman, R. J., et al. (2004) · Diabetes · doi:10.2337/diabetes.53.3.735 · Cited by 81 · see citing works
Cytokine- and microbially induced sleep responses of interleukin-10 deficient mice
Toth, L. A., & Opp, M. R. (2001) · American Journal of Physiology-Regulatory, Integrative and Comparative Physiology · doi:10.1152/ajpregu.2001.280.6.r1806 · Cited by 75 · see citing works
Requirement of TrkB for synapse elimination in developing cerebellar Purkinje cells
Bosman, L. W. J., Hartmann, J., Barski, J. J., Lepier, A., Noll‐Hussong, M., Reichardt, L. F., & Konnerth, A. (2007) · Journal of Neurocytology · doi:10.1007/s11068-006-9002-z · Cited by 72 · see citing works
Zhang, J., Obál, F., Fang, J., Collins, B., & Krueger, J. M. (1996) · Neuroscience Letters · doi:10.1016/s0304-3940(96)13232-8 · Cited by 72 · see citing works
Raizen, D. M., Cullison, K., Pack, A. I., & Sundaram, M. V. (2006) · Genetics · doi:10.1534/genetics.106.057380 · Cited by 62 · see citing works
Self-citationGenome-wide search for new genes controlling plasma lipid concentrations in mice and humans
Wang, X., & Paigen, B. J. (2005) · Current Opinion in Lipidology · doi:10.1097/01.mol.0000162317.09054.9d · Cited by 59 · see citing works
Analysis of the QTL for sleep homeostasis in mice:Homer1ais a likely candidate
Mackiewicz, M., Paigen, B. J., Naidoo, N. N., & Pack, A. I. (2008) · Physiological Genomics · doi:10.1152/physiolgenomics.00189.2007 · Cited by 59 · see citing works
Self-citationEffect of rest deprivation on motor activity of fish
Tobler, I., & Borb�ly, A. A. (1985) · Journal of Comparative Physiology A · doi:10.1007/bf01350078 · Cited by 51 · see citing works
Homer1a and 1bc levels in the rat somatosensory cortex vary with the time of day and sleep loss
Nelson, S. E., Duricka, D., Campbell, K., Churchill, L., & Krueger, J. M. (2004) · Neuroscience Letters · doi:10.1016/j.neulet.2004.05.089 · Cited by 51 · see citing works
Schrattenholz, A. S., & Šoškić, V. (2006) · Current Topics in Medicinal Chemistry · doi:10.2174/156802606776894519 · Cited by 51 · see citing works
Differences in Activity of Cytochrome C Oxidase in Brain Between Sleep and Wakefulness
Nikonova, E. V., Vijayasarathy, C., Zhang, L., Cater, J. R., Galante, R. J., Ward, S. E., Avadhani, N. G., & Pack, A. I. (2005) · SLEEP · doi:10.1093/sleep/28.1.21 · Cited by 49 · see citing works
Self-citationPhysiogenomic resources for rat models of heart, lung and blood disorders
Malek, R. L., Wang, H.-Y., Kwitek, A. E., Greene, A. S., BHAGABATI, N. K., Borchardt, G. J., Cahill, L., Currier, T., Frank, B. C., Fu, X., et al. (2006) · Nature Genetics · doi:10.1038/ng1693 · Cited by 49 · see citing works
Genomics and Clinical Medicine: Rationale for Creating and Effectively Evaluating Animal Models
Swanson, K. S., Mazur, M. J., Vashisht, K., Rund, L. A., Beever, J. E., Counter, C. M., & Schook, L. B. (2004) · Experimental Biology and Medicine · doi:10.1177/153537020422900902 · Cited by 48 · see citing works
Conditional expression of UAS‐transgenes in the adult eye with a new gene‐switch vector system
Roman, G., & Davis, R. L. (2002) · genesis · doi:10.1002/gene.10133 · Cited by 45 · see citing works
Proteomic characterization of lipid rafts markers from the rat intestinal brush border
Nguyen, H. T. T., Amine, A. B., Lafitte, D., et al. (2006) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2006.01.141 · Cited by 43 · see citing works
Sleep and wakefulness in c-fos and fos B gene knockout mice
Shiromani, P. J., Basheer, R., Thakkar, J., Wagner, D., Greco, M. A., & Charness, M. E. (2000) · Molecular Brain Research · doi:10.1016/s0169-328x(00)00123-6 · Cited by 39 · see citing works
Paradoxical Sleep in Mice Lacking M3 and M2/M4 Muscarinic Receptors
Goutagny, R., Comte, J., Salvert, D., Gomeza, J., Yamada, M., Wess, J., Luppi, P., & Fort, P. (2005) · Neuropsychobiology · doi:10.1159/000087560 · Cited by 37 · see citing works
Haplotype-based genetics in mice and rats
Cuppen, E. P. J. G. (2005) · Trends in Genetics · doi:10.1016/j.tig.2005.03.010 · Cited by 35 · see citing works
Regulation of mitochondrial gene expression by energy demand in neural cells
Mehrabian, Z., Liu, L., Fiskum, G. M., Rapoport, S. I., & Chandrasekaran, K. (2005) · Journal of Neurochemistry · doi:10.1111/j.1471-4159.2005.03066.x · Cited by 30 · see citing works
Melkman, T., & Sengupta, P. (2003) · Developmental Biology · doi:10.1016/j.ydbio.2003.07.005 · Cited by 25 · see citing works
Mackiewicz, M., & Pack, A. I. (2003) · Respiratory Physiology & Neurobiology · doi:10.1016/s1569-9048(03)00045-4 · Cited by 21 · see citing works
Self-citationPHYSIOLOGICAL GENETICS: APPLICATION TO HYPERTENSION RESEARCH
Jacob, H. J. (1999) · Clinical and Experimental Pharmacology and Physiology · doi:10.1046/j.1440-1681.1999.03078.x · Cited by 20 · see citing works
Consomic Rats for the Identification of Genes and Pathways Underlying Cardiovascular DiseasePreprint
Roman, R. J., Cowley, A. W., Greene, A. S., et al. (2002) · Cold Spring Harbor Symposia on Quantitative Biology · doi:10.1101/sqb.2002.67.309 · Cited by 18 · see citing works
Hendricks, J. C. (2005) · Nature Neuroscience · doi:10.1038/nn0605-703 · Cited by 8 · see citing works
Sánchez (2002) · doi:10.1379/1466-1268(2002)007
Flagged first, then by citations
Cited by
Sorted by citations
Rasch, B., & Born, J. (2013) · Physiological Reviews · doi:10.1152/physrev.00032.2012 · Cited by 2,783 · see citing works
“Subsequent microarray studies in the mouse and fruit fly largely confirmed that expression of several genes is differentially regulated during sleep and waking and that these genes are related to synaptic plasticity, response to cellular stress, energy and lipid metabolism, and membrane trafficking (201, 610, 752, 753…”
BackgroundGrandner, M. A. (2017) · Sleep Medicine Clinics · doi:10.1016/j.jsmc.2016.10.012 · Cited by 720 · see citing works
Schmidt, M. H. (2014) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2014.08.001 · Cited by 291 · see citing works
Hall, M. H., Okun, M. L., Sowers, M., Matthews, K. A., Kravitz, H. M., Hardin, K., Buysse, D. J., Bromberger, J. T., Owens, J. F., Karpov, I., et al. (2012) · SLEEP · doi:10.5665/sleep.1874 · Cited by 123 · see citing works
Obesity, diabetes, and exercise associated with sleep-related complaints in the American population
Grandner, M. A., Patel, N. P., Perlis, M. L., Gehrman, P. R., Xie, D., Sha, D., Pigeon, W. R., Teff, K., Weaver, T., & Gooneratne, N. S. (2011) · Journal of Public Health · doi:10.1007/s10389-011-0398-2 · Cited by 58 · see citing works
Pellegrino, R., Sunaga, D. Y., Guindalini, C., Martins, R. C. S., Mazzotti, D. R., Wei, Z., Daye, Z. J., Andersen, M. L., & Tufik, S. (2012) · Physiological Genomics · doi:10.1152/physiolgenomics.00058.2012 · Cited by 42 · see citing works
- Authors
- Mackiewicz, M., Naidoo, N., Zimmerman, J. E., & Pack, A. I.
- Affiliations
- University of Pennsylvania (US)
- Corresponding author
- Pack, Allan I.
- Venue
- Annals of the New York Academy of Sciences
- Publisher
- Wiley
- Published
- 2008-05
- Volume
- 1129
- Issue
- 1
- Pages
- 335-349
- ISSN
- 0077-8923 (ISSN-L)
- 1749-6632
- OpenAlex
- W2051160651
- Cited by
- 93
- References
- 136
- Citations by year
- 2026: 3 · 2024: 5 · 2023: 3 · 2022: 7 · 2021: 5 · 2020: 4 · 2019: 1 · 2018: 4 · 2017: 6 · 2016: 4 · 2015: 9 · 2014: 11 · 2013: 6 · 2012: 5
- FWCI
- 0.51
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Annals of the New York Academy of Sciences (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institutes of Health
- National Institute on Aging (P01AG017628, AG 17628)
- National Heart, Lung, and Blood Institute (HL-66611, P50HL060287, U01HL066611, HL60287)
- Topics
- Life Sciences › Neuroscience › Cognitive Neuroscience › Sleep and Wakefulness Research
- Life Sciences › Neuroscience › Endocrine and Autonomic Systems › Circadian rhythm and melatonin
- Social Sciences › Psychology › Experimental and Cognitive Psychology › Sleep and Work-Related Fatigue
- Keywords
- sleep, wakefulness, PKA/CREB signaling, sleep deprivation, individual differences in sleep, macromolecular synthesis, unfolded protein response, endoplasmic reticulum stress, BiP, sleep genes, Drosophila, zebrafish, Caenorhabditis elegans
- MeSH terms
- Animals, Gene Expression Regulation, Homeostasis, Sleep, Synapses, Wakefulness, Models, Animal
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review