Neuronal regulation of pre-mRNA splicing by polypyrimidine tract binding proteins, PTBP1 and PTBP2
Open accessAbstract
Alternative splicing patterns are regulated by RNA binding proteins that assemble onto each pre-mRNA to form a complex RNP structure. The polypyrimidine tract binding protein, PTB, has served as an informative model for understanding how RNA binding proteins affect spliceosome assembly and how changes in the expression of these proteins can control complex programs of splicing in tissues. In this review, we describe the mechanisms of splicing regulation by PTB and its function, along with its paralog PTBP2, in neuronal development.
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Each PTBP contains four RNA recognition motif domains that together bind extended CU-rich sequences.
“Each PTBP contains four RNA recognition motif domains that together bind to extended CU-rich sequences13,14.”
From The neurogenetics of alternative splicing (2016) · cites this paper as [13]
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RNA looping by PTB: Evidence using FRET and NMR spectroscopy for a role in splicing repression
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A peptide motif in Raver1 mediates splicing repression by interaction with the PTB RRM2 domain
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Structure and RNA Interactions of the N-Terminal RRM Domains of PTB
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Structure of the two most C‐terminal RNA recognition motifs of PTB using segmental isotope labeling
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Conserved Intron Elements Repress Splicing of a Neuron-Specific c- src Exon In Vitro
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Delineation of a Novel Pathway That Regulates CD154 (CD40 Ligand) Expression
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選択的スプライシングレプレッサーhnRNP A1/A2とPTBはピルビン酸キナーゼアイソフォーム発現と細胞代謝に影響する
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Self-citationNucleocytoplasmic Shuttling of Polypyrimidine Tract-binding Protein Is Uncoupled from RNA Export
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Combinatorial control of a neuron-specific exon
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Self-citationPolypyrimidine tract-binding protein inhibits translation of bip mRNA
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Conformation of Polypyrimidine Tract Binding Protein in Solution
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The polypyrimidine tract binding protein is a monomer
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PTBP1 Is Required for Embryonic Development before Gastrulation
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“PTB null mutations cause embryonic lethality in mouse, whereas conditional knockout specifically in the brain has minimal phenotype (Shibayama et al., 2009; Suckale et al., 2011; Sika Zheng and DLB, unpublished).”
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Polypyrimidine tract binding protein and Notch1 are independently re-expressed in glioma
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PTB/hnRNP I Is Required for RNP Remodeling during RNA Localization in Xenopus Oocytes
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Stoichiometry of a regulatory splicing complex revealed by single‐molecule analyses
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A Novel Polypyrimidine Tract-binding Protein Paralog Expressed in Smooth Muscle Cells
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A Role for Polypyrimidine Tract Binding Protein in the Establishment of Focal Adhesions
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Self-citationExpression of Human nPTB Is Limited by Extreme Suboptimal Codon Content
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Repression of α-actinin SM exon splicing by assisted binding of PTB to the polypyrimidine tract
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Drosophila polypyrimidine tract-binding protein is necessary for spermatid individualization
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ASCOT identifies key regulators of neuronal subtype-specific splicing
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The RNA-binding protein PTBP1 is necessary for B cell selection in germinal centers
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PTBP1 Lactylation Promotes Glioma Stem Cell Maintenance through PFKFB4-Driven Glycolysis
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The role of alternative splicing coupled to nonsense-mediated mRNA decay in human disease
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- Authors
- Keppetipola, N., Sharma, S., Li, Q., & Black, D. L.
- Affiliations
- University of California, Los Angeles (US)
- Howard Hughes Medical Institute (US)
- Corresponding author
- Black, Douglas L.
- Venue
- Critical Reviews in Biochemistry and Molecular Biology
- Publisher
- Informa UK Limited
- Published
- 2012-06-02
- Volume
- 47
- Issue
- 4
- Pages
- 360-378
- ISSN
- 0045-6411 (ISSN-L)
- 1040-9238
- 1549-7798
- PMC
- PMC3422667
- OpenAlex
- W2024593827
- Cited by
- 201
- References
- 165
- Citations by year
- 2026: 15 · 2025: 22 · 2024: 18 · 2023: 15 · 2022: 20 · 2021: 16 · 2020: 14 · 2018: 19 · 2017: 15 · 2016: 17 · 2015: 11 · 2014: 10 · 2013: 7 · 2012: 1
- FWCI
- 0.85
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Critical Reviews in Biochemistry and Molecular Biology (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- Howard Hughes Medical Institute
- National Institutes of Health
- National Institute of General Medical Sciences (R01 GM 49662, R24GM070857, R01GM049662)
- National Institute of Neurological Disorders and Stroke (T32NS007449, 5T32 NS07449)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA regulation and disease
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
- Keywords
- pre-mRNA splicing, alternative splicing, polypyrimidine tract-binding protein, PTBP1, PTBP2, RNA-binding proteins, spliceosome assembly, protein-RNA complex, neuronal development
- MeSH terms
- Animals, Humans, RNA Precursors, RNA Splicing, RNA-Binding Proteins, Alternative Splicing, Polypyrimidine Tract-Binding Protein
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