Cited by 362Autophagy in Disease and TherapyLysosomal Storage Disorders ResearchCellular transport and secretion

Neurodegenerative lysosomal disorders: A continuum from development to late age

Open access
Nixon, Ralph A., Yang, Dun-Sheng, Lee, Ju-Hyun·2008·Autophagy

Abstract

Neuronal survival requires continuous lysosomal turnover of cellular constituents delivered by autophagy and endocytosis. Primary lysosomal dysfunction in inherited congenital "lysosomal storage" disorders is well known to cause severe neurodegenerative phenotypes associated with accumulations of lysosomes and autophagic vacuoles (AVs). Recently, the number of inherited adult-onset neurodegenerative diseases caused by proteins that regulate protein sorting and degradation within the endocytic and autophagic pathways has grown considerably. In this Perspective, we classify a group of neurodegenerative diseases across the lifespan as disorders of lysosomal function, which feature extensive autophagic-endocytic-lysosomal neuropathology and may share mechanisms of neurodegeneration related to degradative failure and lysosomal destabilization. We highlight Alzheimer's disease as a disease within this group and discuss how each of the genes and other risk factors promoting this disease contribute to progressive lysosomal dysfunction and neuronal cell death.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.4161/auto.6259

Cites

22 of 22 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Insufficient degradation of protein aggregates and chronic inflammation are driving forces of AD and PD brain pathology.

    “Growing evidence indicates that insufficient degradation of protein aggregates and chronic inflammation are driving forces of AD and PD brain pathology [30–32].”

    From Crosstalk between astrocytes and microglia results in increased degradation of α-synuclein and amyloid-β aggregates (2021) · cites this paper as [30]

    The sections on pathological consequences in Alzheimer’s disease and lysosomal-system defects in Parkinson disease link impaired protein degradation to AD pathology and impaired α-synuclein degradation to familial PD. They do not support the additional claim that chronic inflammation drives pathology in either disease. (LLM, conf=0.87)

    Experimental — accuracy not yet measured

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 78

  1. de Duve C. Lysosomes revisited. Eur J Biochem 1983; 137:391-7.
  2. Terman A, Brunk U. Lipofuscin. Int J Biochem Cell Biol 2004; 36:1400-4.
  3. Mizushima N. Autophagy: process and function. Genes Dev 2007; 21:2861-73.
  4. Klionsky DJ. Autophagy: from phenomenology to molecular understanding in less than a decade. Nat Rev Mol Cell Biol 2007; 8:931-7.
  5. Futerman AH, van Meer G. The cell biology of lysosomal storage disorders. Nat Rev Mol Cell Biol 2004; 5:554-65.
  6. Nixon RA. Endosome function and dysfunction in Alzheimer's disease and other neurode- generative diseases. Neurobiol Aging 2005; 26:373-82.
  7. Nixon RA, Cataldo AM. Lysosomal system pathways: genes to neurodegeneration in Alzheimer's disease. J Alzheimers Dis 2006; 9:277-89.
  8. Cuervo AM. Autophagy: many paths to the same end. Mol Cell Biochem 2004; 263:55-72.
  9. Larsen KE, Sulzer D. Autophagy in neurons: a review. Histol Histopathol 2002; 17:897-908.
  10. Sorkin A, Von Zastrow M. Signal transduction and endocytosis: close encounters of many kinds. Nat Rev Mol Cell Biol 2002; 3:600-14.
  11. Piper RC, Luzio JP. Late endosomes: sorting and partitioning in multivesicular bodies. Traffic 2001; 2:612-21.
  12. Luzio JP, Rous BA, Bright NA, Pryor PR, Mullock BM, Piper RC. Lysosome-endosome fusion and lysosome biogenesis. J Cell Sci 2000; 113:1515-24.
  13. Nishi T, Forgac M. The vacuolar (H+)-ATPases-nature's most versatile proton pumps. Nat Rev Mol Cell Biol 2002; 3:94-103.
  14. Pillay CS, Elliott E, Dennison C. Endolysosomal proteolysis and its regulation. Biochem J 2002; 363:417-29.
  15. Gruenberg J, Stenmark H. The biogenesis of multivesicular endosomes. Nat Rev Mol Cell Biol 2004; 5:317-23.
  16. Babst M, Sato TK, Banta LM, Emr SD. Endosomal transport function in yeast requires a novel AAA-type ATPase, Vps4p. Embo J 1997; 16:1820-31.
  17. Luzio JP, Pryor PR, Bright NA. Lysosomes: fusion and function. Nat Rev Mol Cell Biol 2007; 8:622-32.
  18. Dunn WA Jr. Studies on the mechanisms of autophagy: maturation of the autophagic vacuole. J Cell Biol 1990; 110:1935-45.
  19. Kasper D, Planells Cases R, Fuhrmann JC, Scheel O, Zeitz O, Ruether K, Schmitt A, Poet M, Steinfeld R, Schweizer M, Kornak U, Jentsch TJ. Loss of the chloride channel ClC-7 leads to lysosomal storage disease and neurodegeneration. EMBO J 2005; 24:1079-91.
  20. Kypri E, Schmauch C, Maniak M, De Lozanne A. The BEACH protein LvsB is localized on lysosomes and postlysosomes and limits their fusion with early endosomes. Traffic 2007; 8:774-83.
  21. Shacka JJ, Roth KA, Zhang J. The autophagy-lysosomal degradation pathway: role in neu- rodegenerative disease and therapy. Front Biosci 2008; 13:718-36.
  22. Siintola E, Partanen S, Stromme P, Haapanen A, Haltia M, Maehlen J, Lehesjoki AE, Tyynela J. Cathepsin D deficiency underlies congential human neuronal ceriod-lipofusci- nosis. Brain 2006; 129:1438-45.
  23. Goebel HH, Wisniewski KE. Current state of clinical and morphological features in human NCL. Brain Pathol 2004; 14:61-9.
  24. Ivy GO, Schottler F, Wenzel J, Baudry M, Lynch G. Inhibitors of lysosomal enzymes: accumulation of lipofuscin-like dense bodies in the brain. Science 1984; 226:985-7.
  25. Jentsch TJ. Chloride and the endosomal-lysosomal pathway: emerging roles of CLC chlo- ride transporters. J Physiol 2007; 578:633-40.
  26. Poet M, Kornak U, Schweizer M, Zdebik AA, Scheel O, Hoelter S, Wurst W, Schmitt A, Fuhrmann JC, Planells-Cases R, Mole SE, Hubner CA, Jentsch TJ. Lysosomal storage disease upon disruption of the neuronal chloride transport protein ClC-6. Proc Natl Acad Sci USA 2006; 103:13854-9.
  27. Yoshikawa M, Uchida S, Ezaki J, Rai T, Hayama A, Kobayashi K, Kida Y, Noda M, Koike M, Uchiyama Y, Marumo F, Kominami E, Sasaki S. CLC-3 deficiency leads to phenotypes similar to human neuronal ceroid lipofuscinosis. Genes Cells 2002; 7:597-605.
  28. Carstea ED, Morris JA, Coleman KG, Loftus SK, Zhang D, Cummings C, Gu J, Rosenfeld MA, Pavan WJ, Krizman DB, Nagle J, Polymeropoulos MH, Sturley SL, Ioannou YA, Higgins ME, Comly M, Cooney A, Brown A, Kaneski CR, Blanchette-Mackie EJ, Dwyer NK, Neufeld EB, Chang TY, Liscum L, Tagle DA, et al. Niemann-Pick C1 disease gene: homology to media- tors of cholesterol homeostasis. Science 1997; 277:228-31.
  29. Kobayashi T, Beuchat MH, Lindsay M, Frias S, Palmiter RD, Sakuraba H, Parton RG, Gruenberg J. Late endosomal membranes rich in lysobisphosphatidic acid regulate choles- terol transport. Nat Cell Biol 1999; 1:113-8.
  30. Nohturfft A, Brown MS, Goldstein JL. Topology of SREBP cleavage-activating protein, a poly- topic membrane protein with a sterol-sensing domain. J Biol Chem 1998; 273:17243-50.
  31. Simons K, Gruenberg J. Jamming the endosomal system: lipid rafts and lysosomal storage diseases. Trends Cell Biol 2000; 10:459-62.
  32. Vanier MT, Millat G. Niemann-Pick disease type C. Clin Genet 2003; 64:269-81.
  33. Elleder M, Jirajsek A, Smid F, Ledvinovaj J, Besley GTN. Niemann-Pick disease type C. Acta Neuropathol 1985; 66:325-36.
  34. Pacheco CD, Kunkel R, Lieberman AP. Autophagy in Niemann-Pick C disease is depen- dent upon Beclin-1 and responsive to lipid trafficking defects. Hum Mol Genet 2007; 16:1495-503.
  35. Ko DC, Milenkovic L, Beier SM, Manuel H, Buchanan J, Scott MP. Cell-autonomous death of cerebellar purkinje neurons with autophagy in Neimann-Pick type C disease. PLoS Genet 2005; 1:81-95.
  36. Jin LW, Maezawa I, Vincent I, Bird T. Intracellular accumulation of amyloidogenic frag- ments of amyloid-beta precursor protein in neurons with Niemann-Pick type C defects is associated with endosomal abnormalities. Am J Pathol 2004; 164:975-85.
  37. Lee JA, Beigneux A, Ahmad ST, Young SG, Gao FB. ESCRT-III Dysfunction Causes Autophagosome Accumulation and Neurodegeneration. Current Biology 2007; 17:1561-7.
  38. Kwong LK, Uryu K, Trojanowski JQ, Lee VM. TDP-43 proteinopathies: Neurodegenerative protein misfolding diseases without amyloidosis. Neurosignals 2008; 16:41-51.
  39. Anglade P, Vyas S, Javoy Agid F, Herrero MT, Michel PP, Marquez J, Mouatt-Prigent A, Ruberg M, Hirsch EC, Agid Y. Apoptosis and autophagy in nigral neurons of patients with Parkinson's disease. Histol Histopathol 1997; 12:25-31.
  40. Sarkar S, Davies JE, Huang Z, Tunnacliffe A, Rubinsztein DC. Trehalose, a novel mTOR- independent autophagy enhancer, accelerates the clearance of mutant huntingtin and alpha- synuclein. J Biol Chem 2007; 282:5641-52.
  41. Webb JL, Ravikumar B, Atkins J, Skepper JN, Rubinsztein DC. Alpha-synuclein is degraded by both autophagy and the proteasome. J Biol Chem 2003; 278:25009-13.
  42. Stefanis L, Larsen KE, Rideout HJ, Sulzer D, Greene LA. Expression of A53T mutant but not wild-type alpha-synuclein in PC12 cells induces alterations of the ubiquitin-dependent degradation system, loss of dopamine release and autophagic cell death. J Neurosci 2001; 21:9549-60.
  43. Ramirez A, Heimbach A, Grundemann J, Stiller B, Hampshire D, Cid LP, Goebel I, Mubaidin AF, Wriekat AL, Roeper J, Al-Din A, Hillmer AM, Karsak M, Liss B, Woods CG, Behrens MI, Kubisch C. Hereditary parkinsonism with dementia is caused by mutations in ATP13A2, encoding a lysosomal type 5 P-type ATPase. Nat Genet 2006; 38:1184-91.
  44. Prusiner SB. Biology and genetics of prion diseases. Annu Rev Microbiol 1994; 48:655-86.
  45. Arnold JE, Tipler C, Laszlo L, Hope J, Landon M, Mayer RJ. The abnormal isoform of the prion protein accumulates in late-endosome-like organelles in scrapie-infected mouse brain. J Pathol 1995; 176:403-11.
  46. Laszlo L, Lowe J, Self T, Kenward N, Landon M, McBride T, Farquhar C, McConnell I, Brown J, Hope J, et al. Lysosomes as key organelles in the pathogenesis of prion encepha- lopathies. J Pathol 1992; 166:333-41.
  47. Vonsattel JP, DiFiglia M. Huntington disease. J Neuropathol Exp Neurol 1998; 57:369-84.
  48. Yamamoto A, Cremona ML, Rothman JE. Autophagy-mediated clearance of huntingtin aggregates triggered by the insulin-signaling pathway. J Cell Biol 2006; 172:719-31.
  49. Lloyd TE, Atkinson R, Wu MN, Zhou Y, Pennetta G, Bellen HJ. Hrs regulates endosome membrane invagination and tyrosine kinase receptor signaling in Drosophila. Cell 2002; 108:261-9.
  50. Yagishita S. Morphological investigations on axonal swellings and spheroids in various human diseases. Virchows Arch A Pathol Anat Histopathol 1978; 378:181-97.
  51. Griffin JW, Watson DF. Axonal transport in neurological disease. Ann Neurol 1988; 23:3-13.
  52. Schmidt ML, DiDario AG, Lee VM, Trojanowski JQ. An extensive network of PHF tau- rich dystrophic neurites permeates neocortex and nearly all neuritic and diffuse amyloid plaques in Alzheimer disease. FEBS Lett 1994; 344:69-73.
  53. Benzing WC, Mufson EJ, Armstrong DM. Alzheimer's disease-like dystrophic neurites characteristically associated with senile plaques are not found within other neurodegenera- tive diseases unless amyloid beta-protein deposition is present. Brain Res 1993; 606:10-8.
  54. Nixon RA. Autophagy, amyloidogenesis and Alzheimer disease. J Cell Sci 2007; 120:4081-91.
  55. Boland B, Kumar A, Lee S, Yu H, Platt F, Wegiel J, Nixon RA. Autophagy induction and autophagosome clearance in neurons: relationship to autophagic pathology in Alzheimer's disease. J Neurosci 2008; in press.
  56. Boland B, Nixon RA. Neuronal macroautophagy: from development to degeneration. Mol Aspects Med 2006; 27:503-19.
  57. Lee HG, Zhu X, Nunomura A, Perry G, Smith MA. Amyloid beta: the alternate hypothesis. Curr Alzheimer Res 2006; 3:75-80.
  58. De Strooper B, Annaert W, Cupers P, Saftig P, Craessaerts K, Mumm JS, Schroeter EH, Schrijvers V, Wolfe MS, Ray WJ, Goate A, Kopan R. A presenilin-1-dependent gamma- secretase-like protease mediates release of Notch intracellular domain. Nature 1999; 398:518-22.
  59. De Strooper B. Loss-of-function presenilin mutations in Alzheimer disease. Talking Point on the role of presenilin mutations in Alzheimer disease. EMBO Rep 2007; 8:141-6.
  60. Esselens C, Oorschot V, Baert V, Raemaekers T, Spittaels K, Serneels L, Zheng H, Saftig P, De Strooper B, Klumperman J, Annaert W. Presenilin 1 mediates the turnover of tel- encephalin in hippocampal neurons via an autophagic degradative pathway. J Cell Biol 2004; 166:1041-54.
  61. Wilson CA, Murphy DD, Giasson BI, Zhang B, Trojanowski JQ, Lee VM. Degradative organelles containing mislocalized a-and b-synuclein proliferate in presenilin-1 null neu- rons. J Cell Biol 2004; 165:335-46
  62. Yu WH, Cuervo AM, Kumar A, Peterhoff CM, Schmidt SD, Lee JH, Mohan PS, Mercken M, Farmery MR, Tjernberg LO, Jiang Y, Duff K, Uchiyama Y, Naslund J, Mathews PM, Cataldo AM, Nixon RA. Macroautophagy-a novel b-amyloid peptide-generating pathway activated in Alzheimer's disease. J Cell Biol 2005; 171:87-98.
  63. Cataldo AM, Peterhoff CM, Schmidt SD, Terio NB, Duff K, Beard M, Mathews PM, Nixon RA. Presenilin mutations in familial Alzheimer disease and transgenic mouse models accelerate neuronal lysosomal pathology. J Neuropathol Exp Neurol 2004; 63:821-30.
  64. Margallo-Lana M, Morris CM, Gibson AM, Tan AL, Kay DW, Tyrer SP, Moore BP, Ballard CG. Influence of the amyloid precursor protein locus on dementia in Down syndrome. Neurology 2004; 62:1996-8.
  65. Cataldo AM, Petanceska S, Terio NB, Peterhoff CM, Troncoso JC, Durham R, Mercken M, Mehta PD, Buxbaum JD, Haroutunian V, Nixon RA. A-beta localization to abnormal endosomes coincides with early increases in soluble A-beta in Alzheimer's disease brain. Neurobiol Aging 2004; 25:1263-72.
  66. Cataldo AM, Mathews PM, Boiteau AB, Hassinger LC, Peterhoff CM, Gruenberg J, Neve RL, Nixon RA. Down syndrome fibroblasts model Alzheimer-related endosome pathology: Accelerated endocytosis promotes late endocytic defects. Am J Pathol 2008; In press.
  67. Laifenfeld D, Patzek LJ, McPhie DL, Chen Y, Levites Y, Cataldo AM, Neve RL. Rab5 mediates an amyloid precursor protein signaling pathway that leads to apoptosis. J Neurosci 2007; 27:7141-53.
  68. Strittmatter WJ, Roses AD. Apolipoprotein E and Alzheimer's disease. Annu Rev Neurosci 1996; 19:53-77.
  69. Cataldo AM, Peterhoff CM, Troncoso JC, Gomez-Isla T, Hyman BT, Nixon RA. Endocytic pathway abnormalities precede amyloid beta deposition in sporadic Alzheimer's disease and Down syndrome: differential effects of APOE genotype and presenilin mutations. Am J Pathol 2000; 157:277-86.
  70. Cataldo AM, Hamilton DJ, Barnett JL, Paskevich PA, Nixon RA. Properties of the endosomal-lysosomal system in the human central nervous system: disturbances mark most neurons in populations at risk to degenerate in Alzheimer's disease. J Neurosci 1996; 16:186-99.
  71. Papassotiropoulos A, Bagli M, Kurz A, Kornhuber J, Forstl H, Maier W, Pauls J, Lautenschlager N, Heun R. A genetic variation of cathepsin D is a major risk factor for Alzheimer's disease. Ann Neurol 2000; 47:399-403.
  72. Tizon B, Levy E. Protease inhibitors and their involvement in neurological disorders. In: Lajtha A, ed. Handbook of Neurochemistry and Molecular Neurobiology. New York: Springer Publishers 2006; 1-34.
  73. Donati A. The involvement of macroautophagy in aging and anti-aging interventions. Mol Aspects Med 2006; 27:455-70.
  74. Terman A, Gustafsson B, Brunk UT. Autophagy, organelles and ageing. J Pathol 2007; 211:134-43.
  75. Koike M, Shibata M, Ohsawa Y, Nakanishi H, Koga T, Kametaka S, Waguri S, Momoi T, Kominami E, Peters C, Figura K, Saftig P, Uchiyama Y. Involvement of two different cell death pathways in retinal atrophy of cathepsin D-deficient mice. Mol Cell Neurosci 2003; 22:146-61.
  76. Raynaud F, Marcilhac A. Implication of calpain in neuronal apoptosis. A possible regulation of Alzheimer's disease. Febs J 2006; 273:3437-43.
  77. Reid E, Connell J, Edwards TL, Duley S, Brown SE, Sanderson CM. The hereditary spastic paraplegia protein spastin interacts with the ESCRT-III complex-associated endosomal protein CHMP1B. Hum Mol Genet 2005; 14:19-38. 120. Askanas V, Engel WK. Inclusion-body myositis: newest concepts of pathogenesis and rela- tion to aging and Alzheimer disease. J Neuropathol Exp Neurol 2001; 60:1-14. 121. Ji ZS, Mullendorff K, Cheng IH, Miranda RD, Huang Y, Mahley RW. Reactivity of apoli- poprotein E4 and amyloid beta peptide: lysosomal stability and neurodegeneration. J Biol Chem 2006; 281:2683-92. 122.
  78. Rogaeva E, Meng Y, Lee JH, Gu Y, Kawarai T, Zou F, Katayama T, Baldwin CT, Cheng R, Hasegawa H, Chen F, Shibata N, Lunetta KL, Pardossi-Piquard R, Bohm C, Wakutani Y, Cupples LA, Cuenco KT, Green RC, Pinessi L, Rainero I, Sorbi S, Bruni A, Duara R, Friedland RP, Inzelberg R, Hampe W, Bujo H, Song YQ, Andersen OM, Willnow TE, Graff-Radford N, Petersen RC, Dickson D, Der SD, Fraser PE, Schmitt-Ulms G, Younkin S, Mayeux R, Farrer LA, St George-Hyslop P. The neuronal sortilin-related receptor SORL1 is genetically associated with Alzheimer disease. Nat Genet 2007; 39:168-77.

Cited by

Sorted by citations

Authors
Nixon, R. A., Yang, D.-S., & Lee, J.-H.
Affiliations
  • New York University (US)
  • Nathan Kline Institute for Psychiatric Research (US)
Venue
Autophagy
Published
2008-06-02
Volume
4
Issue
5
Pages
590-599
ISSN
  • 1554-8627 (ISSN-L)
  • 1554-8635
OpenAlex
W2119141725
Cited by
362
References
22
Citations by year
2026: 3 · 2025: 8 · 2024: 12 · 2023: 12 · 2022: 23 · 2021: 18 · 2020: 26 · 2019: 28 · 2018: 22 · 2017: 20 · 2016: 20 · 2015: 22 · 2014: 20 · 2013: 24 · 2012: 32
FWCI
2.57
Type
journal article
Language
en
Open access
Locations
  • Autophagy (publishedVersion)
  • PubMed (publishedVersion)
Funders
  • Alzheimer's Association
  • National Institute on Aging (P01AG017617)
Topics
  • Health Sciences › Medicine › Epidemiology › Autophagy in Disease and Therapy
  • Health Sciences › Medicine › Physiology › Lysosomal Storage Disorders Research
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
Keywords
lysosomal storage disease, endocytosis, autophagosomes, lysosomal dysfunction, Alzheimer's disease, protein degradation, neuronal cell death, lysosomal destabilization
MeSH terms
Aging, Alzheimer Disease, Animals, Autophagy, Humans, Lysosomes, Lysosomal Storage Diseases, Neurodegenerative Diseases

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review