Check biochemistry, genetics and molecular biology papers: citations, claims and retractions

Reactive Oxygen Species in the Regulation of Synaptic Plasticity and Memory

Massaad, C. A., & Klann, E. (2011) · Antioxidants & Redox Signaling

Redox biology and oxidative stressNeuroscience and Neuropharmacology Research

Cited by 635

AlphaFold and Implications for Intrinsically Disordered Proteins

Ruff, K. M., & Pappu, R. V. (2021) · Journal of Molecular Biology

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 635

RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer

Wolfe, A. L., Singh, K., Zhong, Y., Drewe, P., Rajasekhar, V. K., Sanghvi, V. R., Mavrakis, K. J., Jiang, M., Roderick, J. E., Van der Meulen, J., et al. (2014) · Nature

RNA and protein synthesis mechanismsDNA and Nucleic Acid Chemistry

Cited by 635

Decontamination of ambient RNA in single-cell RNA-seq with DecontX

Yang, S., Corbett, S. E., Koga, Y., Wang, Z., Johnson, W. E., Yajima, M., & Campbell, J. D. (2020) · Genome Biology

Single-cell and spatial transcriptomicsGenomics and Phylogenetic Studies

Cited by 635

In Silico Labeling: Predicting Fluorescent Labels in Unlabeled Images

Christiansen, E. M., Yang, S. J., Ando, D. M., Javaherian, A., Skibinski, G., Lipnick, S., Mount, E., O’Neil, A., Shah, K., Lee, A. K., et al. (2018) · Cell

Cell Image Analysis TechniquesAdvanced Fluorescence Microscopy Techniques

Cited by 635

Nuclear Factor (NF)-κB–regulated X-chromosome–linked iap Gene Expression Protects Endothelial Cells from Tumor Necrosis Factor α–induced Apoptosis

Stehlik, C., de Martin, R., Kumabashiri, I., Schmid, J. A., Binder, B. R., & Lipp, J. (1998) · The Journal of Experimental Medicine

NF-κB Signaling PathwaysCell death mechanisms and regulation

Cited by 635

Current approaches and challenges for the metabolite profiling of complex natural extracts

Wolfender, J.-L., Marti, G., Thomas, A., & Bertrand, S. (2015) · Journal of Chromatography A

Metabolomics and Mass Spectrometry StudiesChromatography in Natural Products

Cited by 635

Searching for missing heritability: Designing rare variant association studies

Zuk, O., Schaffner, S. F., Samocha, K., Do, R., Hechter, E., Kathiresan, S., Daly, M. J., Neale, B. M., Sunyaev, S. R., & Lander, E. S. (2014) · Proceedings of the National Academy of Sciences

Genetic Associations and EpidemiologyGenomics and Rare Diseases

Cited by 635

Estimation of pleiotropy between complex diseases using single-nucleotide polymorphism-derived genomic relationships and restricted maximum likelihood

Lee, S. H., Yang, J., Goddard, M. E., Visscher, P. M., & Wray, N. R. (2012) · Bioinformatics

Genetic Associations and EpidemiologyGenetic and phenotypic traits in livestock

Cited by 635

Missing data and technical variability in single-cell RNA-sequencing experiments

Hicks, S. C., Townes, F. W., Teng, M., & Irizarry, R. A. (2018) · Biostatistics

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 635

Tumour hypoxia causes DNA hypermethylation by reducing TET activity

Thienpont, B., Steinbacher, J., Zhao, H., D’Anna, F., Kuchnio, A., Ploumakis, A., Ghesquière, B., Van Dyck, L., Boeckx, B., Schoonjans, L., et al. (2016) · Nature

Epigenetics and DNA MethylationCancer, Hypoxia, and Metabolism

Cited by 635

Language models enable zero-shot prediction of the effects of mutations on protein function

Meier, J., Rao, R., Verkuil, R., Liu, J., Sercu, T., & Rives, A. (2021) · bioRxiv (Cold Spring Harbor Laboratory)

Machine Learning in BioinformaticsProtein Structure and Dynamics

Cited by 635

Transposable Elements, Epigenetics, and Genome Evolution

Fedoroff, N. V. (2012) · Science

Chromosomal and Genetic VariationsPlant Genetic and Mutation Studies

Cited by 634

Comparison and evaluation of statistical error models for scRNA-seq

Choudhary, S., & Satija, R. (2022) · Genome Biology

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 634

Organ aging signatures in the plasma proteome track health and disease

Oh, H. S.-H., Rutledge, J., Nachun, D., Pálovics, R., Abiose, O., Moran-Losada, P., Channappa, D., Urey, D. Y., Kim, K., Sung, Y. J., et al. (2023) · Nature

Genetics, Aging, and Longevity in Model OrganismsDementia and Cognitive Impairment Research

Cited by 634

Adipose-specific deletion of autophagy-related gene 7 ( atg7 ) in mice reveals a role in adipogenesis

Zhang, Y., Goldman, S., Baerga, R., Zhao, Y., Komatsu, M., & Jin, S. (2009) · Proceedings of the National Academy of Sciences

Autophagy in Disease and TherapyAdipose Tissue and Metabolism

Cited by 634

The RING heterodimer BRCA1-BARD1 is a ubiquitin ligase inactivated by a breast cancer-derived mutation

Hashizume, R., Fukuda, M., Maeda, I., Nishikawa, H., Oyake, D., Yabuki, Y., Ogata, H., & Ohta, T. (2001) · Journal of Biological Chemistry

Ubiquitin and proteasome pathwaysBRCA gene mutations in cancer

Cited by 634

Protective autophagy elicited by RAF→MEK→ERK inhibition suggests a treatment strategy for RAS-driven cancers

Kinsey, C. G., Camolotto, S. A., Boespflug, A. M., Guillen, K. P., Foth, M., Truong, A., Schuman, S. S., Shea, J. E., Seipp, M. T., Yap, J. T., et al. (2019) · Nature Medicine

Autophagy in Disease and TherapyProtein Kinase Regulation and GTPase Signaling

Cited by 634

Gavage of Fecal Samples From Patients With Colorectal Cancer Promotes Intestinal Carcinogenesis in Germ-Free and Conventional Mice

Wong, S. H., Zhao, L., Zhang, X., Nakatsu, G., Han, J., Xu, W., Xiao, X., Kwong, T. N. Y., Tsoi, H., Wu, W. K. K., et al. (2017) · Gastroenterology

Gut microbiota and healthGenetic factors in colorectal cancer

Cited by 634

Biosynthesis of fungal melanins and their importance for human pathogenic fungi

Langfelder, K., Streibel, M., Jahn, B., Haase, G., & Brakhage, A. A. (2003) · Fungal Genetics and Biology

Fungal and yeast genetics researchFungal Infections and Studies

Cited by 634

Mechanism of oligonucleotide release from cationic liposomes.

Zelphati, O., & Szoka, F. C. (1996) · Proceedings of the National Academy of Sciences

RNA Interference and Gene DeliveryLipid Membrane Structure and Behavior

Cited by 634

The gut microbiome and liver cancer: mechanisms and clinical translation

Yu, L.-X., & Schwabe, R. F. (2017) · Nature Reviews Gastroenterology & Hepatology

Gut microbiota and healthHepatocellular Carcinoma Treatment and Prognosis

Cited by 634

CRISPR/Cas9 systems have off-target activity with insertions or deletions between target DNA and guide RNA sequences

Lin, Y., Cradick, T. J., Brown, M. T., Deshmukh, H., Ranjan, P., Sarode, N., Wile, B. M., Vertino, P. M., Stewart, F. J., & Bao, G. (2014) · Nucleic Acids Research

CRISPR and Genetic EngineeringRNA regulation and disease

Cited by 634

Selective killing of ATM- or p53-deficient cancer cells through inhibition of ATR

Reaper, P. M., Griffiths, M. R., Long, J. M., Charrier, J.-D., MacCormick, S., Charlton, P. A., Golec, J. M. C., & Pollard, J. R. (2011) · Nature Chemical Biology

DNA Repair MechanismsPARP inhibition in cancer therapy

Cited by 633