Catalysis in abiotic structured media: an approach to selective synthesis of biopolymers

Monnard, P.-A.

doi:10.1007/s00018-004-4342-2

Cited by 20Origins and Evolution of LifeRNA and protein synthesis mechanismsEnzyme Catalysis and Immobilization

Catalysis in abiotic structured media: an approach to selective synthesis of biopolymers

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Monnard, P.-A.·2005·Cellular and Molecular Life Sciences

DOI 10.1007/s00018-004-4342-2PMC PMC11365906

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Abstract

Micro- and nanoenvironments formed by amphiphile self-assembled structures, water-ice lattices and minerals have well-defined, repeating, chemical and physical properties that can be used for selective synthesis of biopolymers, such as RNAs and proteins. The advances made in the development of polymerization supported by these micro- and nanosystems are reviewed here. In particular, it is shown that these systems promote non-enzymatic biopolymerization, yielding long polymers whose sequence composition is determined by the interactions between monomers and the supporting environment. When used to compartmentalize enzymatic biopolymerization, micro- and nanostructures allow the implementation of molecular selection and evolution schemes, which are difficult in homogeneous medium, yielding very active molecules. Thus, micro- and nanoenvironment approaches to the synthesis and selection of biopolymers could be developed into a new biotechnological tool for the production of biopolymers with novel functions.

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Untitled work
Blocher (2001) · doi:10.1002/1522-2675(20010418)84:4

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In-ice evolution of RNA polymerase ribozyme activity
Attwater, J., Wochner, A., & Holliger, P. (2013) · Nature Chemistry · doi:10.1038/nchem.1781 · Cited by 279 · see citing works
“The G93A and C97A mutations that provide the main cold-specific activity boost are located in the single-stranded linker region of the ribozyme between the catalytic core (1-90) and the processivity domain (105-187).”
Background
The dawn of the RNA World: toward functional complexity through ligation of random RNA oligomers
Briones, C., Stich, M., & Manrubia, S. C. (2009) · RNA · doi:10.1261/rna.1488609 · Cited by 114 · see citing works
Chemical fidelity of an RNA polymerase ribozyme
Attwater, J., Tagami, S., Kimoto, M., Butler, K., Kool, E. T., Wengel, J., Herdewijn, P., Hirao, I., & Holliger, P. (2013) · Chemical Science · doi:10.1039/c3sc50574j · Cited by 33 · see citing works

Authors: Monnard, P.-A.
Affiliations: Massachusetts General Hospital (US)
Corresponding author: Monnard, P.-A.
ORCID: Monnard, P.-A.
Venue: Cellular and Molecular Life Sciences
Publisher: Springer Science and Business Media LLC
Published: 2005-03
Volume: 62
Issue: 5
Pages: 520-534
ISSN: 1420-682X (ISSN-L)
1420-9071
DOI: 10.1007/s00018-004-4342-2
PMC: PMC11365906
OpenAlex: W2059393195
Cited by: 20
References: 132
Citations by year: 2021: 1 · 2014: 1 · 2013: 2 · 2012: 3
FWCI: 1.35
Type: journal article
Language: en
Open access: green
www.ncbi.nlm.nih.gov
Licence: www.springernature.com/gp/researchers/text-and-data-mining (tdm)
www.springernature.com/gp/researchers/text-and-data-mining (vor)
Locations: Cellular and Molecular Life Sciences (publishedVersion)
PubMed Central (publishedVersion)
PubMed (publishedVersion)
Topics: Physical Sciences › Physics and Astronomy › Astronomy and Astrophysics › Origins and Evolution of Life
Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Enzyme Catalysis and Immobilization
Keywords: abiotic catalysis, structured media, amphiphile self-assembly, mineral surfaces, RNA synthesis, protein synthesis, compartmentalization, molecular selection, molecular evolution, biopolymer production
MeSH terms: Biopolymers, Catalysis, Emulsions, Enzymes, Ice, Inorganic Chemicals, Liposomes, Minerals, Proteins, RNA, Surface-Active Agents, Water, Molecular Structure, Nanostructures

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Catalysis in abiotic structured media: an approach to selective synthesis of biopolymers

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