Cited by 50

The DOI matches its Crossref record; 8 of the 8 references it cites were found in a registry or an index.

MicroRNA-181 promotes synaptogenesis and attenuates axonal outgrowth in cortical neurons

Kos, Aron, Olde Loohuis, Nikkie, Meinhardt, Julia, van Bokhoven, Hans, Kaplan, Barry B., Martens, Gerard J, Aschrafi, Armaz·2016·Cellular and Molecular Life Sciences

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1007/s00018-016-2179-0

Cites

8 of 8 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Flagged first, then by citations

Show all 8 references

Research works printed but not linked: 56

  1. Buckley SM, Aranda-Orgilles B, Strikoudis A, Apostolou E, Loizou E et al (2012) Regulation of pluripotency and cellular reprogramming by the ubiquitin–proteasome system. Cell Stem Cell 11:783–798 · DOI
  2. Smart F, Aschrafi A, Atkins A, Owens GC, Pilotte J et al (2007) Two isoforms of the cold-inducible mRNA-binding protein RBM3 localize to dendrites and promote translation. J Neurochem 101:1367–1379 · DOI
  3. Klann E, Dever TE (2004) Biochemical mechanisms for translational regulation in synaptic plasticity. Nat Rev Neurosci 5:931–942 · DOI
  4. Huang F, Chotiner JK, Steward O (2005) The mRNA for elongation factor 1alpha is localized in dendrites and translated in response to treatments that induce long-term depression. J Neurosci 25:7199–7209 · DOI
  5. Aschrafi A, Kar AN, Natera-Naranjo O, Macgibeny MA, Gioio AE et al (2012) MicroRNA-338 regulates the axonal expression of multiple nuclear-encoded mitochondrial mRNAs encoding subunits of the oxidative phosphorylation machinery. Cell Mol Life Sci 69:4017–4027 · DOI · Paper page
  6. van Rooij E, Sutherland LB, Qi X, Richardson JA, Hill J et al (2007) Control of stress-dependent cardiac growth and gene expression by a microRNA. Science 316:575–579 · DOI
  7. Barca-Mayo O, De Pietri Tonelli D (2014) Convergent microRNA actions coordinate neocortical development. Cell Mol Life Sci 71:2975–2995 · DOI
  8. Bicker S, Lackinger M, Weiss K, Schratt G (2014) MicroRNA-132, -134, and -138: a microRNA troika rules in neuronal dendrites. Cell Mol Life Sci 71:3987–4005 · DOI · Paper page
  9. Olde Loohuis NF, Kos A, Martens GJ, Van Bokhoven H, Nadif Kasri N et al (2012) MicroRNA networks direct neuronal development and plasticity. Cell Mol Life Sci 69:89–102 · DOI
  10. Iyer AN, Bellon A, Baudet ML (2014) microRNAs in axon guidance. Front Cell Neurosci 8:78
  11. McNeill E, Van Vactor D (2012) MicroRNAs shape the neuronal landscape. Neuron 75:363–379 · DOI · Paper page
  12. Ghahramani Seno MM, Hu P, Gwadry FG, Pinto D, Marshall CR et al (2011) Gene and miRNA expression profiles in autism spectrum disorders. Brain Res 1380:85–97 · DOI
  13. Olde Loohuis NF, Kole K, Glennon JC, Karel P, Van der Borg G et al (2015) Elevated microRNA-181c and microRNA-30d levels in the enlarged amygdala of the valproic acid rat model of autism. Neurobiol Dis 80:42–53 · DOI · Paper page
  14. Smith B, Treadwell J, Zhang D, Ly D, McKinnell I et al (2010) Large-scale expression analysis reveals distinct microRNA profiles at different stages of human neurodevelopment. PLoS One 5:e11109 · DOI
  15. Lim LP, Lau NC, Garrett-Engele P, Grimson A, Schelter JM et al (2005) Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs. Nature 433:769–773 · DOI · Paper page
  16. Sasaki Y, Gross C, Xing L, Goshima Y, Bassell GJ (2014) Identification of axon-enriched microRNAs localized to growth cones of cortical neurons. Dev Neurobiol 74:397–406 · DOI
  17. Hancock ML, Preitner N, Quan J, Flanagan JG (2014) MicroRNA-132 is enriched in developing axons, locally regulates Rasa1 mRNA, and promotes axon extension. J Neurosci 34:66–78 · DOI · Paper page
  18. Natera-Naranjo O, Aschrafi A, Gioio AE, Kaplan BB (2010) Identification and quantitative analyses of microRNAs located in the distal axons of sympathetic neurons. RNA 16:1516–1529 · DOI
  19. Dajas-Bailador F, Bonev B, Garcez P, Stanley P, Guillemot F et al (2012) microRNA-9 regulates axon extension and branching by targeting Map1b in mouse cortical neurons. Nat Neurosci. doi: 10.1038/nn.3082 · DOI
  20. Aschrafi A, Schwechter AD, Mameza MG, Natera-Naranjo O, Gioio AE et al (2008) MicroRNA-338 regulates local cytochrome c oxidase IV mRNA levels and oxidative phosphorylation in the axons of sympathetic neurons. J Neurosci 28:12581–12590 · DOI
  21. Park JW, Vahidi B, Taylor AM, Rhee SW, Jeon NL (2006) Microfluidic culture platform for neuroscience research. Nat Protoc 1:2128–2136 · DOI
  22. Marchetto MC, Carromeu C, Acab A, Yu D, Yeo GW et al (2010) A model for neural development and treatment of Rett syndrome using human induced pluripotent stem cells. Cell 143:527–539 · DOI · Paper page
  23. Gallagher D, Voronova A, Zander MA, Cancino GI, Bramall A et al (2015) Ankrd11 is a chromatin regulator involved in autism that is essential for neural development. Dev Cell 32:31–42 · DOI
  24. Belmonte MK, Allen G, Beckel-Mitchener A, Boulanger LM, Carper RA et al (2004) Autism and abnormal development of brain connectivity. J Neurosci 24:9228–9231 · DOI · Paper page
  25. Belmonte MK, Bourgeron T (2006) Fragile X syndrome and autism at the intersection of genetic and neural networks. Nat Neurosci 9:1221–1225 · DOI
  26. Ouyang YB, Lu Y, Yue S, Giffard RG (2012) miR-181 targets multiple Bcl-2 family members and influences apoptosis and mitochondrial function in astrocytes. Mitochondrion 12:213–219 · DOI
  27. Ouyang YB, Lu Y, Yue S, Xu LJ, Xiong XX et al (2012) miR-181 regulates GRP78 and influences outcome from cerebral ischemia in vitro and in vivo. Neurobiol Dis 45:555–563 · DOI
  28. Helwak A, Kudla G, Dudnakova T, Tollervey D (2013) Mapping the human miRNA interactome by CLASH reveals frequent noncanonical binding. Cell 153:654–665 · DOI · Paper page
  29. Wang WX, Wilfred BR, Xie K, Jennings MH, Hu YH et al (2010) Individual microRNAs (miRNAs) display distinct mRNA targeting “rules”. RNA Biol 7:373–380 · DOI · Paper page
  30. Head BP, Peart JN, Panneerselvam M, Yokoyama T, Pearn ML et al (2010) Loss of caveolin-1 accelerates neurodegeneration and aging. PLoS One 5:e15697 · DOI
  31. Head BP, Hu Y, Finley JC, Saldana MD, Bonds JA et al (2011) Neuron-targeted caveolin-1 protein enhances signaling and promotes arborization of primary neurons. J Biol Chem 286:33310–33321 · DOI
  32. Malik AR, Urbanska M, Gozdz A, Swiech LJ, Nagalski A et al (2013) Cyr61, a matricellular protein, is needed for dendritic arborization of hippocampal neurons. J Biol Chem 288:8544–8559 · DOI
  33. Lu Y, Tian QB, Endo S, Suzuki T (2007) A role for LRP4 in neuronal cell viability is related to apoE-binding. Brain Res 1177:19–28 · DOI
  34. Yumoto N, Kim N, Burden SJ (2012) Lrp4 is a retrograde signal for presynaptic differentiation at neuromuscular synapses. Nature 489:438–442 · DOI
  35. Mei Y, Wang Z, Zhang L, Zhang Y, Li X et al (2012) Regulation of neuroblastoma differentiation by forkhead transcription factors FOXO1/3/4 through the receptor tyrosine kinase PDGFRA. Proc Natl Acad Sci USA 109:4898–4903 · DOI
  36. Feliciano P, Andrade R, Bykhovskaia M (2013) Synapsin II and Rab3a cooperate in the regulation of epileptic and synaptic activity in the CA1 region of the hippocampus. J Neurosci 33:18319–18330 · DOI
  37. Yuen EY, Wei J, Liu W, Zhong P, Li X et al (2012) Repeated stress causes cognitive impairment by suppressing glutamate receptor expression and function in prefrontal cortex. Neuron 73:962–977 · DOI · Paper page
  38. Saba R, Storchel PH, Aksoy-Aksel A, Kepura F, Lippi G et al (2012) Dopamine-regulated microRNA MiR-181a controls GluA2 surface expression in hippocampal neurons. Mol Cell Biol 32:619–632 · DOI · Paper page
  39. Beveridge NJ, Tooney PA, Carroll AP, Gardiner E, Bowden N et al (2008) Dysregulation of miRNA 181b in the temporal cortex in schizophrenia. Hum Mol Genet 17:1156–1168 · DOI
  40. Beveridge NJ, Gardiner E, Carroll AP, Tooney PA, Cairns MJ (2010) Schizophrenia is associated with an increase in cortical microRNA biogenesis. Mol Psychiatry 15:1176–1189 · DOI
  41. Kamanu TK, Radovanovic A, Archer JA, Bajic VB (2013) Exploration of miRNA families for hypotheses generation. Sci Rep 3:2940 · DOI
  42. Sun X, Sit A, Feinberg MW (2014) Role of miR-181 family in regulating vascular inflammation and immunity. Trends Cardiovasc Med 24:105–112 · DOI
  43. Issler O, Haramati S, Paul ED, Maeno H, Navon I et al (2014) MicroRNA 135 is essential for chronic stress resiliency, antidepressant efficacy, and intact serotonergic activity. Neuron 83:344–360 · DOI · Paper page
  44. Abbott AL, Alvarez-Saavedra E, Miska EA, Lau NC, Bartel DP et al (2005) The let-7 MicroRNA family members mir-48, mir-84, and mir-241 function together to regulate developmental timing in Caenorhabditis elegans. Dev Cell 9:403–414 · DOI
  45. Willemsen MH, Valles A, Kirkels LA, Mastebroek M, Olde Loohuis N et al (2011) Chromosome 1p21.3 microdeletions comprising DPYD and MIR137 are associated with intellectual disability. J Med Genet 48:810–818 · DOI · Paper page
  46. Perkins DO, Jeffries CD, Jarskog LF, Thomson JM, Woods K et al (2007) microRNA expression in the prefrontal cortex of individuals with schizophrenia and schizoaffective disorder. Genome Biol 8:R27 · DOI · Paper page
  47. Xu B, Karayiorgou M, Gogos JA (2010) MicroRNAs in psychiatric and neurodevelopmental disorders. Brain Res 1338:78–88 · DOI
  48. Stark KL, Xu B, Bagchi A, Lai WS, Liu H et al (2008) Altered brain microRNA biogenesis contributes to phenotypic deficits in a 22q11-deletion mouse model. Nat Genet 40:751–760 · DOI · Paper page
  49. Mellios N, Sugihara H, Castro J, Banerjee A, Le C et al (2011) miR-132, an experience-dependent microRNA, is essential for visual cortex plasticity. Nat Neurosci 14:1240–1242 · DOI · Paper page
  50. Lin Q, Wei W, Coelho CM, Li X, Baker-Andresen D et al (2011) The brain-specific microRNA miR-128b regulates the formation of fear-extinction memory. Nat Neurosci 14:1115–1117 · DOI · Paper page
  51. Zhang F, Gradinaru V, Adamantidis AR, Durand R, Airan RD et al (2010) Optogenetic interrogation of neural circuits: technology for probing mammalian brain structures. Nat Protoc 5:439–456 · DOI · Paper page
  52. Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N et al (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 3:RESEARCH0034 · DOI · Paper page
  53. Dweep H, Sticht C, Pandey P, Gretz N (2011) miRWalk—database: prediction of possible miRNA binding sites by “walking” the genes of three genomes. J Biomed Inform 44:839–847 · DOI
  54. Meijering E, Jacob M, Sarria JC, Steiner P, Hirling H et al (2004) Design and validation of a tool for neurite tracing and analysis in fluorescence microscopy images. Cytometry A 58:167–176 · DOI
  55. Rodriguez A, Ehlenberger DB, Dickstein DL, Hof PR, Wearne SL (2008) Automated three-dimensional detection and shape classification of dendritic spines from fluorescence microscopy images. PLoS One 3:e1997 · DOI
  56. Ebert MS, Neilson JR, Sharp PA (2007) MicroRNA sponges: competitive inhibitors of small RNAs in mammalian cells. Nat Methods 4:721–726 · DOI · Paper page

Cited by

Sorted by citations

See all 50

Metadata

Authors
Kos, A., Olde Loohuis, N., Meinhardt, J., van Bokhoven, H., Kaplan, B. B., Martens, G. J., & Aschrafi, A.
Venue
Cellular and Molecular Life Sciences
Published
2016-03-26
Volume
73
Issue
18
Pages
3555-3567
ISSN
  • 1420-682X
  • 1420-9071
Cited by
50
References
8
Language
en

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review