Metazoan MicroRNAs
Open accessAbstract
MicroRNAs (miRNAs) are ∼22 nt RNAs that direct posttranscriptional repression of mRNA targets in diverse eukaryotic lineages. In humans and other mammals, these small RNAs help sculpt the expression of most mRNAs. This article reviews advances in our understanding of the defining features of metazoan miRNAs and their biogenesis, genomics, and evolution. It then reviews how metazoan miRNAs are regulated, how they recognize and cause repression of their targets, and the biological functions of this repression, with a compilation of knockout phenotypes that shows that important biological functions have been identified for most of the broadly conserved miRNAs of mammals.
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miRNAs exert their repressive regulatory function by guiding RISC to complementary target sites in the 3′ UTR of target mRNAs, resulting in mRNA degradation, translation inhibition, or sequestration.
“Generally, miRNAs exert their repressive regulatory function by guiding the RNA-induced silencing complex (RISC) to complementary target sites in the 3′ untranslated region (UTR) of target mRNAs resulting in mRNA degradation, translation inhibition, or sequestration (Bartel, 2018).”
From Scalable and deep profiling of mRNA targets for individual microRNAs with chimeric eCLIP (2022) · cites this paper as Bartel, 2018
The miRNA Target Recognition section describes pairing to sites in target mRNAs’ 3′ UTRs, and miRNA Regulatory Mechanisms describes Argonaute-mediated mRNA decay and reduced translation. The latter calls decay and translational repression the two repressive consequences of this regulatory mode; our copy does not support sequestration as a third consequence. (LLM, conf=0.87)
Experimental — accuracy not yet measuredRNA processing and miRNA-mediated gene silencing are fundamental mechanisms that fine-tune gene expression to regulate tissue development and physiology.
“RNA processing and miRNA-mediated gene silencing are fundamental mechanisms that fine-tune gene expression to regulate tissue development and physiology (Kalsotra and Cooper 2011; Baralle and Giudice 2017; Bartel 2018; Marasco and Kornblihtt 2023)”
From ESRP2–microRNA-122 axis promotes the postnatal onset of liver polyploidization and maturation (2025) · cites this paper as Bartel 2018
Small ncRNAs are endogenously expressed transcripts 18 to 200 nt long.
“Small noncoding RNAs (ncRNAs) are a large family of endogenously expressed transcripts, 18 to 200 nt long”
From A mouse tissue atlas of small noncoding RNA (2020) · cites this paper as [1]
Small ncRNAs play a crucial role in regulating cell function.
“that play a crucial role in regulating cell function (1, 2)”
From A mouse tissue atlas of small noncoding RNA (2020) · cites this paper as [1]
microRNAs (miRNAs) regulate gene expression by targeting specific mRNAs for degradation or translational repression.
“microRNAs (miRNAs) play a central role in the regulation of gene expression by targeting specific mRNAs for degradation or translational repression.”
From microRNA strand selection: Unwinding the rules (2021) · cites this paper as Bartel, 2018
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High-Throughput Analysis Reveals Rules for Target RNA Binding and Cleavage by AGO2
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“MicroRNAs A microRNA is a small non-coding RNA that can regulate gene expression of complementary mRNAs by binding to the 3 untranslated region (3 UTR) (Ambros, 2004; Bartel, 2018).”
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- Authors
- Bartel, D. P.
- Affiliations
- Howard Hughes Medical Institute (US)
- Corresponding author
- Bartel, David P.
- ORCID
- Bartel, David P.
- Venue
- Cell
- Publisher
- Elsevier BV
- Published
- 2018-03
- Volume
- 173
- Issue
- 1
- Pages
- 20-51
- ISSN
- 0092-8674 (ISSN-L)
- PMC
- PMC6091663
- OpenAlex
- W4211064852
- Cited by
- 3,751
- References
- 30
- Citations by year
- 2026: 370 · 2025: 404 · 2024: 437 · 2023: 536 · 2022: 544 · 2021: 557 · 2020: 460 · 2019: 326 · 2018: 114 · 2014: 1
- FWCI
- 38.16
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Cell (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- DSpace@MIT (Massachusetts Institute of Technology) (submittedVersion, cc-by-nc-nd)
- Funders
- National Institute of General Medical Sciences
- National Institutes of Health
- Howard Hughes Medical Institute
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › MicroRNA in disease regulation
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Molecular Biology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Research and Splicing
- Keywords
- microRNA, microRNA biogenesis, miRNA evolution, post-transcriptional regulation, microRNA function, mammals
- MeSH terms
- Animals, Gene Expression Regulation, Humans, Nucleic Acid Conformation, Evolution, Molecular, Base Pairing, Gene Silencing, Genomics, MicroRNAs, RNA Isoforms
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