Cited by 39Colorectal Cancer Treatments and StudiesMelanoma and MAPK PathwaysLung Cancer Treatments and Mutations

A reversible SRC-relayed COX2 inflammatory program drives resistance to BRAF and EGFR inhibition in BRAFV600E colorectal tumors

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Ruiz-Saenz, Ana, Atreya, Chloe E., Wang, Changjun, Pan, Bo, Dreyer, Courtney A., Brunen, Diede, Prahallad, Anirudh, Muñoz, Denise P. +17 more·2023·Nature Cancer

Abstract

BRAFV600E mutation confers a poor prognosis in metastatic colorectal cancer (CRC) despite combinatorial targeted therapies based on the latest understanding of signaling circuitry. To identify parallel resistance mechanisms induced by BRAF–MEK–EGFR co-targeting, we used a high-throughput kinase activity mapping platform. Here we show that SRC kinases are systematically activated in BRAF V600E CRC following targeted inhibition of BRAF ± EGFR and that coordinated targeting of SRC with BRAF ± EGFR increases treatment efficacy in vitro and in vivo. SRC drives resistance to BRAF ± EGFR targeted therapy independently of ERK signaling by inducing transcriptional reprogramming through β-catenin (CTNNB1). The EGFR-independent compensatory activation of SRC kinases is mediated by an autocrine prostaglandin E 2 loop that can be blocked with cyclooxygenase-2 (COX2) inhibitors. Co-targeting of COX2 with BRAF + EGFR promotes durable suppression of tumor growth in patient-derived tumor xenograft models. COX2 inhibition represents a drug-repurposing strategy to overcome therapeutic resistance in BRAF V600E CRC.

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  • Ruiz-Saenz et al. revealed that targeting SRC and BRAF had an equivalent or better effect on tumor growth inhibition compared to targeting EGFR and BRAF.

    “Their study revealed that targeting SRC and BRAF had an equivalent or better effect on tumor growth inhibition compared to targeting EGFR and BRAF, similar to our observations.”
  • Ruiz-Saenz et al. showed that SRC plays a major role in adaptive resistance to BRAF inhibition in BRAFV600E CRC.

    “Consistent with our data, the recently published work of Ruiz-Saenz et al. [45] also showed that SRC plays a major role in adaptive resistance to BRAF inhibition in BRAFV600E CRC.”

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Research works printed but not linked: 61

  1. [1]Venderbosch S Mismatch repair status and BRAF mutation status in metastatic colorectal cancer patients: a pooled analysis of the CAIRO, CAIRO2, COIN, and FOCUS studies Clin. Cancer Res. 2014 20 5322 5330 10.1158/1078-0432.CCR-14-0332 25139339 PMC4201568 · DOI · Paper page
  2. [2]Morris V Progression-free survival remains poor over sequential lines of systemic therapy in patients with BRAF-mutated colorectal cancer Clin. Colorectal Cancer 2014 13 164 171 10.1016/j.clcc.2014.06.001 25069797 PMC4266576 · DOI · Paper page
  3. [3]Kopetz S Phase II pilot study of vemurafenib in patients with metastatic BRAF-mutated colorectal cancer J. Clin. Oncol. 2015 33 4032 4038 10.1200/JCO.2015.63.2497 26460303 PMC4669589 · DOI · Paper page
  4. [4]Corcoran RB Combined BRAF and MEK inhibition with dabrafenib and trametinib in BRAFV600-mutant colorectal cancer J. Clin. Oncol. 2015 33 4023 4031 10.1200/JCO.2015.63.2471 26392102 PMC4669588 · DOI · Paper page
  5. [5]Kopetz S Encorafenib, binimetinib, and cetuximab in BRAFV600E-mutated colorectal cancer N. Engl. J. Med. 2019 381 1632 1643 10.1056/NEJMoa1908075 31566309 · DOI · Paper page
  6. [6]Corcoran RB Combined BRAF, EGFR, and MEK inhibition in patients with BRAFV600E-mutant colorectal cancer Cancer Discov. 2018 8 428 443 10.1158/2159-8290.CD-17-1226 29431699 PMC5882509 · DOI · Paper page
  7. [7]Coppe JP Mapping phospho-catalytic dependencies of therapy-resistant tumours reveals actionable vulnerabilities Nat. Cell Biol. 2019 21 778 790 10.1038/s41556-019-0328-z 31160710 PMC7170003 · DOI
  8. [8]Olow A An atlas of the human kinome reveals the mutational landscape underlying dysregulated phosphorylation cascades in cancer Cancer Res. 2016 76 1733 1745 10.1158/0008-5472.CAN-15-2325-T 26921330 PMC4907268 · DOI
  9. [9]Mori, M., Pan, B. & Coppé, J.-P. High-throughput kinase activiy mapping (HT-KAM) system: biochemical assay. Nat. Protoc. Exch.10.1038/protex.2019.029 (2019). · DOI
  10. [10]Yau, C., Wolf, D. M. & Coppé, J. High-throughput kinase activity mapping (HT-KAM) system: analysis of phospho-catalytic profiles. Nat. Protoc. Exch.10.1038/protex.2019.030 (2019). · DOI
  11. [11]Rajaram S A multi-modal data resource for investigating topographic heterogeneity in patient-derived xenograft tumors Sci. Data. 2019 6 253 10.1038/s41597-019-0225-0 31672976 PMC6823477 · DOI
  12. [12]Corcoran RB EGFR-mediated re-activation of MAPK signaling contributes to insensitivity of BRAF mutant colorectal cancers to RAF inhibition with vemurafenib Cancer Discov. 2012 2 227 235 10.1158/2159-8290.CD-11-0341 22448344 PMC3308191 · DOI · Paper page
  13. [13]Prahallad A Unresponsiveness of colon cancer to BRAFV600E inhibition through feedback activation of EGFR Nature 2012 483 100 103 10.1038/nature10868 22281684 · DOI · Paper page
  14. [14]Yang H Antitumor activity of BRAF inhibitor vemurafenib in preclinical models of BRAF-mutant colorectal cancer Cancer Res. 2012 72 779 789 10.1158/0008-5472.CAN-11-2941 22180495 · DOI · Paper page
  15. [15]Manning G Whyte DB Martinez R Hunter T Sudarsanam S The protein kinase complement of the human genome Science 2002 298 1912 1934 10.1126/science.1075762 12471243 · DOI · Paper page
  16. [16]Erpel T Courtneidge SA Src family protein tyrosine kinases and cellular signal transduction pathways Curr. Opin. Cell Biol. 1995 7 176 182 10.1016/0955-0674(95)80025-5 7612268 · DOI
  17. [17]Parsons SJ Parsons JT Src family kinases, key regulators of signal transduction Oncogene 2004 23 7906 7909 10.1038/sj.onc.1208160 15489908 · DOI
  18. [18]Thomas SM Brugge JS Cellular functions regulated by Src family kinases Annu. Rev. Cell Dev. Biol. 1997 13 513 609 10.1146/annurev.cellbio.13.1.513 9442882 · DOI
  19. [19]Xi Y Identification of pY654-β-catenin as a critical co-factor in hypoxia-inducible factor-1α signaling and tumor responses to hypoxia Oncogene 2013 32 5048 5057 10.1038/onc.2012.530 23246962 PMC3871884 · DOI
  20. [20]Herbst A Comprehensive analysis of β-catenin target genes in colorectal carcinoma cell lines with deregulated Wnt/β-catenin signaling BMC Genomics 2014 15 74 10.1186/1471-2164-15-74 24467841 PMC3909937 · DOI
  21. [21]Pai R Prostaglandin E2 transactivates EGF receptor: a novel mechanism for promoting colon cancer growth and gastrointestinal hypertrophy Nat. Med. 2002 8 289 293 10.1038/nm0302-289 11875501 · DOI
  22. [22]Buchanan FG Role of β-arrestin 1 in the metastatic progression of colorectal cancer Proc. Natl Acad. Sci. USA 2006 103 1492 1497 10.1073/pnas.0510562103 16432186 PMC1360588 · DOI
  23. [23]Castellone MD Teramoto H Williams BO Druey KM Gutkind JS Prostaglandin E2 promotes colon cancer cell growth through a Gs–axin–β-catenin signaling axis Science 2005 310 1504 1510 10.1126/science.1116221 16293724 · DOI
  24. [24]Dorsam RT Gutkind JS G-protein-coupled receptors and cancer Nat. Rev. Cancer 2007 7 79 94 10.1038/nrc2069 17251915 · DOI
  25. [25]Wang D Dubois RN Eicosanoids and cancer Nat. Rev. Cancer 2010 10 181 193 10.1038/nrc2809 20168319 PMC2898136 · DOI
  26. [26]Simmons DL Botting RM Hla T Cyclooxygenase isozymes: the biology of prostaglandin synthesis and inhibition Pharmacol. Rev. 2004 56 387 437 10.1124/pr.56.3.3 15317910 · DOI
  27. [27]Wang D Dubois RN The role of COX-2 in intestinal inflammation and colorectal cancer Oncogene 2010 29 781 788 10.1038/onc.2009.421 19946329 PMC3181054 · DOI
  28. [28]Montero-Conde C Relief of feedback inhibition of HER3 transcription by RAF and MEK inhibitors attenuates their antitumor effects in BRAF-mutant thyroid carcinomas Cancer Discov. 2013 3 520 533 10.1158/2159-8290.CD-12-0531 23365119 PMC3651738 · DOI · Paper page
  29. [29]Petricoin EF Zoon KC Kohn EC Barrett JC Liotta LA Clinical proteomics: translating benchside promise into bedside reality Nat. Rev. Drug Discov. 2002 1 683 695 10.1038/nrd891 12209149 · DOI
  30. [30]Blume-Jensen P Hunter T Oncogenic kinase signalling Nature 2001 411 355 365 10.1038/35077225 11357143 · DOI · Paper page
  31. [31]Fleuren ED Zhang L Wu J Daly RJ The kinome ‘at large’ in cancer Nat. Rev. Cancer 2016 16 83 98 10.1038/nrc.2015.18 26822576 · DOI
  32. [32]Konieczkowski DJ Johannessen CM Garraway LA A convergence-based framework for cancer drug resistance Cancer Cell 2018 33 801 815 10.1016/j.ccell.2018.03.025 29763622 PMC5957297 · DOI · Paper page
  33. [33]Roskoski R Jr. Src protein-tyrosine kinase structure, mechanism, and small molecule inhibitors Pharmacol. Res. 2015 94 9 25 10.1016/j.phrs.2015.01.003 25662515 · DOI
  34. [34]Girotti MR Inhibitors that also target SRC are effective in drug-resistant BRAF mutant melanoma Cancer Cell 2015 27 85 96 10.1016/j.ccell.2014.11.006 25500121 PMC4297292 · DOI · Paper page
  35. [35]Girotti MR Inhibiting EGF receptor or SRC family kinase signaling overcomes BRAF inhibitor resistance in melanoma Cancer Discov. 2013 3 158 167 10.1158/2159-8290.CD-12-0386 23242808 PMC5321574 · DOI
  36. [36]Kopetz S Targeting SRC and epidermal growth factor receptor in colorectal cancer: rationale and progress into the clinic Gastrointest. Cancer Res. 2007 1 S37 S41 19360146 PMC2666842
  37. [37]Fabian JR Daar IO Morrison DK Critical tyrosine residues regulate the enzymatic and biological activity of Raf-1 kinase Mol. Cell. Biol. 1993 13 7170 7179 7692235 PMC364778
  38. [38]Marais R Light Y Paterson HF Marshall CJ Ras recruits Raf-1 to the plasma membrane for activation by tyrosine phosphorylation EMBO J. 1995 14 3136 3145 10.1002/j.1460-2075.1995.tb07316.x 7542586 PMC394375 · DOI
  39. [39]Marais R Light Y Paterson HF Mason CS Marshall CJ Differential regulation of Raf-1, A-Raf, and B-Raf by oncogenic ras and tyrosine kinases J. Biol. Chem. 1997 272 4378 4383 10.1074/jbc.272.7.4378 9020159 · DOI
  40. [40]Hu J Allosteric activation of functionally asymmetric RAF kinase dimers Cell 2013 154 1036 1046 10.1016/j.cell.2013.07.046 23993095 PMC3844432 · DOI
  41. [41]Chen R Regulation of Akt/PKB activation by tyrosine phosphorylation J. Biol. Chem. 2001 276 31858 31862 10.1074/jbc.C100271200 11445557 · DOI
  42. [42]Coluccia AM SKI-606 decreases growth and motility of colorectal cancer cells by preventing pp60c-Src-dependent tyrosine phosphorylation of β-catenin and its nuclear signaling Cancer Res. 2006 66 2279 2286 10.1158/0008-5472.CAN-05-2057 16489032 · DOI
  43. [43]Brembeck FH Rosario M Birchmeier W Balancing cell adhesion and Wnt signaling, the key role of β-catenin Curr. Opin. Genet. Dev. 2006 16 51 59 10.1016/j.gde.2005.12.007 16377174 · DOI
  44. [44]Silva CM Role of STATs as downstream signal transducers in Src family kinase-mediated tumorigenesis Oncogene 2004 23 8017 8023 10.1038/sj.onc.1208159 15489919 · DOI
  45. [45]Cancer Genome Atlas Network. Comprehensive molecular characterization of human colon and rectal cancer. Nature487, 330–337 (2012). PMC3401966 22810696
  46. [46]Anastas JN Moon RT WNT signalling pathways as therapeutic targets in cancer Nat. Rev. Cancer 2013 13 11 26 10.1038/nrc3419 23258168 · DOI
  47. [47]Kosumi K Prognostic association of PTGS2 (COX-2) over-expression according to BRAF mutation status in colorectal cancer: results from two prospective cohorts and CALGB 89803 (Alliance) trial Eur. J. Cancer 2019 111 82 93 10.1016/j.ejca.2019.01.022 30826660 PMC6436990 · DOI
  48. [48]Sharma MR Dasatinib in previously treated metastatic colorectal cancer: a phase II trial of the University of Chicago Phase II Consortium Invest. New Drugs 2012 30 1211 1215 10.1007/s10637-011-9681-x 21552992 PMC4317401 · DOI · Paper page
  49. [49]Parseghian CM Dual inhibition of EGFR and c-Src by cetuximab and dasatinib combined with FOLFOX chemotherapy in patients with metastatic colorectal cancer Clin. Cancer Res. 2017 23 4146 4154 10.1158/1078-0432.CCR-16-3138 28280091 PMC5540760 · DOI · Paper page
  50. [50]Reddy SM Phase II study of saracatinib (AZD0530) in patients with previously treated metastatic colorectal cancer Invest. New Drugs 2015 33 977 984 10.1007/s10637-015-0257-z 26062928 · DOI
  51. [51]Chen EY A phase II study of celecoxib with irinotecan, 5-fluorouracil, and leucovorin in patients with previously untreated advanced or metastatic colorectal cancer Am. J. Clin. Oncol. 2018 41 1193 1198 10.1097/COC.0000000000000465 29782360 PMC6240505 · DOI
  52. [52]André T Phase II study of an optimized 5-fluorouracil–oxaliplatin strategy (OPTIMOX2) with celecoxib in metastatic colorectal cancer: a GERCOR study Ann. Oncol. 2007 18 77 81 10.1093/annonc/mdl336 17030548 · DOI
  53. [53]Maiello E FOLFIRI with or without celecoxib in advanced colorectal cancer: a randomized phase II study of the Gruppo Oncologico dell’Italia Meridionale (GOIM) Ann. Oncol. 2006 17 vii55 vii59 10.1093/annonc/mdl952 16760295 · DOI
  54. [54]Sanjana NE Shalem O Zhang F Improved vectors and genome-wide libraries for CRISPR screening Nat. Methods 2014 11 783 784 10.1038/nmeth.3047 25075903 PMC4486245 · DOI · Paper page
  55. [55]Shalem O Genome-scale CRISPR–Cas9 knockout screening in human cells Science 2014 343 84 87 10.1126/science.1247005 24336571 PMC4089965 · DOI · Paper page
  56. [56]Iglesias-Bartolome R Inactivation of a Gαs–PKA tumour suppressor pathway in skin stem cells initiates basal-cell carcinogenesis Nat. Cell Biol. 2015 17 793 803 10.1038/ncb3164 25961504 PMC4449815 · DOI
  57. [57]Foucquier J Guedj M Analysis of drug combinations: current methodological landscape Pharmacol. Res. Perspect. 2015 3 e00149 10.1002/prp2.149 26171228 PMC4492765 · DOI · Paper page
  58. [58]Berenbaum MC What is synergy? Pharmacol. Rev. 1989 41 93 141 2692037
  59. [59]Pan, B. et al. Functional detection and inhibition of the targetable oncogenic kinome of chemotherapy-treated triple negative breast cancer cells. Cancer Res.10.1158/1538-7445.SABCS15-P6-08-03 (2016). · DOI
  60. [60]Mori, M. et al. Kinase-sensing system to identify the oncogenic phospho-fingerprint of breast cancer. J. Clin. Oncol.10.1200/jco.2013.31.26_suppl.23 (2013). · DOI
  61. [61]Krepler C Personalized preclinical trials in BRAF inhibitor-resistant patient-derived xenograft models identify second-line combination therapies Clin. Cancer Res. 2016 22 1592 1602 10.1158/1078-0432.CCR-15-1762 26673799 PMC4818716 · DOI

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Authors
Ruiz-Saenz, A., Atreya, C. E., Wang, C., Pan, B., Dreyer, C. A., Brunen, D., Prahallad, A., Muñoz, D. P., Ramms, D. J., Burghi, V., Spassov, D. S., Fewings, E., Hwang, Y. C., Cowdrey, C., Moelders, C., Schwarzer, C., Wolf, D. M., Hann, B., VandenBerg, S. R., Shokat, K., Moasser, M. M., Bernards, R., Gutkind, J. S., van ‘t Veer, L. J., & Coppé, J.-P.
Affiliations
  • University of California, San Francisco (US)
  • The Netherlands Cancer Institute (NL)
  • University of California San Diego (US)
Corresponding author
Coppé, Jean-Philippe
Venue
Nature Cancer
Published
2023-02-09
Volume
4
Issue
2
Pages
240-256
ISSN
2662-1347 (ISSN-L)
OpenAlex
W4319826248
Cited by
39
References
0
Citations by year
2026: 5 · 2025: 11 · 2024: 15 · 2023: 8
FWCI
4.88
Type
journal article
Language
en
Open access
Locations
  • Nature Cancer (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • EUR Research Repository (Erasmus University Rotterdam) (acceptedVersion, cc-by)
  • eScholarship (California Digital Library) (submittedVersion)
  • EUR Research Repository (Erasmus University Rotterdam) (submittedVersion, cc-by)
Funders
  • Amgen
  • National Natural Science Foundation of China (81001183)
  • KWF Kankerbestrijding
  • Oncode Institute
  • National Institutes of Health (UL1TR000005)
  • University of California, San Francisco (UL1TR000005)
  • National Cancer Institute (R01CA122216, R01CA229447)
  • National Center for Advancing Translational Sciences
Topics
  • Health Sciences › Medicine › Oncology › Colorectal Cancer Treatments and Studies
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Melanoma and MAPK Pathways
  • Health Sciences › Medicine › Pulmonary and Respiratory Medicine › Lung Cancer Treatments and Mutations
Keywords
BRAF V600E mutation, colorectal cancer, Src kinase, COX-2 inhibition, EGFR inhibition, BRAF inhibition, drug resistance, MEK, drug repurposing
MeSH terms
Humans, Colorectal Neoplasms, src-Family Kinases, MAP Kinase Signaling System, Proto-Oncogene Proteins B-raf, Cyclooxygenase 2, ErbB Receptors

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