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Genetics and Environmental Interactions Shape the Intestinal Microbiome to Promote Inflammatory Bowel Disease Versus Mucosal Homeostasis
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“The composition of the microbiome varies between individuals based on genetic and environmental factors.84”
From Current Advances in Chitosan Nanoparticles Based Oral Drug Delivery for Colorectal Cancer Treatment (2022) · cites this paper as [84]
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Cites
Unravelling the pathogenesis of inflammatory bowel disease
Xavier, R. J., & Podolsky, D. K. (2007) · Nature · doi:10.1038/nature06005 · Cited by 4,364
The Effect of Diet on the Human Gut Microbiome: A Metagenomic Analysis in Humanized Gnotobiotic Mice
Turnbaugh, P. J., Ridaura, V. K., Faith, J. J., Rey, F. E., Knight, R., & Gordon, J. I. (2009) · Science Translational Medicine · doi:10.1126/scitranslmed.3000322 · Cited by 3,058
Abraham, C., & Cho, J. H. (2009) · New England Journal of Medicine · doi:10.1056/nejmra0804647 · Cited by 2,712
A key role for autophagy and the autophagy gene Atg16l1 in mouse and human intestinal Paneth cells
Cadwell, K., Liu, J. Y., Brown, S. L., Miyoshi, H., Loh, J., Lennerz, J. K., Kishi, C., Kc, W., Carrero, J. A., Hunt, S., et al. (2008) · Nature · doi:10.1038/nature07416 · Cited by 1,542
Png, C. W., Lindén, S. K., Gilshenan, K. S., Zoetendal, E. G., McSweeney, C. S., Sly, L. I., McGuckin, M. A., & Florin, T. H. J. (2010) · American Journal of Gastroenterology · doi:10.1038/ajg.2010.281 · Cited by 1,364
Glycan foraging in vivo by an intestine-adapted bacterial symbiont
Sonnenburg, J. L., Xu, J., Leip, D. D., Chen, C.-H., Westover, B. P., Weatherford, J., Buhler, J. D., & Gordon, J. I. (2005) · Science · doi:10.1126/science.1109051 · Cited by 1,184
Site and Strain-Specific Variation in Gut Microbiota Profiles and Metabolism in Experimental Mice
Friswell, M. K., Gika, H., Stratford, I. J., Theodoridis, G., Telfer, B., Wilson, I. D., & McBain, A. J. (2010) · PLoS ONE · doi:10.1371/journal.pone.0008584 · Cited by 207
Research works printed but not linked: 30
- Sartor, 2008, Microbial influences in inflammatory bowel diseases, Gastroenterology, 134, 577, 10.1053/j.gastro.2007.11.059 · DOI · Paper page
- Cadwell, 2010, Virus-plus-susceptibility gene interaction determines Crohn's disease gene Atg16L1 phenotypes in intestine, Cell, 141, 1135, 10.1016/j.cell.2010.05.009 · DOI
- Garrett, 2010, Homeostasis and inflammation in the intestine, Cell, 140, 859, 10.1016/j.cell.2010.01.023 · DOI
- Wehkamp, 2005, Reduced Paneth cell alpha-defensins in ileal Crohn's disease, Proc Natl Acad Sci U S A, 102, 18129, 10.1073/pnas.0505256102 · DOI
- Kaser, 2008, XBP1 links ER stress to intestinal inflammation and confers genetic risk for human inflammatory bowel disease, Cell, 134, 743, 10.1016/j.cell.2008.07.021 · DOI
- Hisamatsu, 2003, CARD15/NOD2 functions as an anti-bacterial factor in human intestinal epithelial cells, Gastroenterology, 124, 993, 10.1053/gast.2003.50153 · DOI
- Lapaquette, 2010, Crohn's disease-associated adherent-invasive E. coli are selectively favoured by impaired autophagy to replicate intracellularly, Cell Microbiol, 12, 99, 10.1111/j.1462-5822.2009.01381.x · DOI
- Frank, 2007, Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases, Proc Natl Acad Sci U S A, 104, 13780, 10.1073/pnas.0706625104 · DOI · Paper page
- Frank, 2010, Disease phenotype and genotype are associated with shifts in intestinal-associated microbiota in inflammatory bowel diseases, Inflamm Bowel Dis
- Nones, 2009, Multidrug resistance gene deficient (mdr1a-/-) mice have an altered caecal microbiota that precedes the onset of intestinal inflammation, J Appl Microbiol, 107, 557, 10.1111/j.1365-2672.2009.04225.x · DOI
- Swidsinski, 2002, Mucosal flora in inflammatory bowel disease, Gastroenterology, 122, 44, 10.1053/gast.2002.30294 · DOI
- Darfeuille-Michaud, 2004, High prevalence of adherent-invasive Escherichia coli associated with ileal mucosa in Crohn's disease, Gastroenterology, 127, 412, 10.1053/j.gastro.2004.04.061 · DOI · Paper page
- Baumgart, 2007, Culture independent analysis of ileal mucosa reveals a selective increase in invasive Escherichia coli of novel phylogeny relative to depletion of Clostridiales in Crohn's disease involving the ileum, The ISME Journal, 1, 403, 10.1038/ismej.2007.52 · DOI
- Sokol, 2008, Faecalibacterium prausnitzii is an antiinflammatory commensal bacterium identified by gut microbiota analysis of Crohn's disease patients, Proc Natl Acad Sci U S A, 105, 16731, 10.1073/pnas.0804812105 · DOI · Paper page
- Swidsinski, 2008, Active Crohn's disease and ulcerative colitis can be specifically diagnosed and monitored based on the biostructure of the fecal flora, Inflamm Bowel Dis, 14, 147, 10.1002/ibd.20330 · DOI
- Lupp, 2007, Host-mediated inflammation disrupts the intestinal microbiota and promotes the overgrowth of Enterobacteriaceae, Cell Host Microbe, 2, 119, 10.1016/j.chom.2007.06.010 · DOI
- Garrett, 2010, Enterobacteriaceae act in concert with the gut microbiota to induce spontaneous and maternally transmitted colitis, Cell Host Microbe, 8, 292, 10.1016/j.chom.2010.08.004 · DOI · Paper page
- Kim, 2005, Variable phenotypes of enterocolitis in interleukin 10-deficient mice monoassociated with two different commensal bacteria, Gastroenterology, 128, 891, 10.1053/j.gastro.2005.02.009 · DOI
- Halfvarson, 2003, Inflammatory bowel disease in a Swedish twin cohort: a long-term follow-up of concordance and clinical characteristics, Gastroenterology, 124, 1767, 10.1016/S0016-5085(03)00385-8 · DOI
- Turnbaugh, 2009, A core gut microbiome in obese and lean twins, Nature, 457, 480, 10.1038/nature07540 · DOI · Paper page
- Willing, 2010, A pyrosequencing study in twins shows that gastrointestinal microbial profiles vary with inflammatory bowel disease phenotypes, Gastroenterology, 139, 1844, 10.1053/j.gastro.2010.08.049 · DOI · Paper page
- Hansen, 2010, The role of mucosal immunity and host genetics in defining intestinal commensal bacteria, Curr Opin Gastroenterol, 10.1097/MOG.0b013e32833f1195 · DOI
- Rawls, 2006, Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection, Cell, 127, 423, 10.1016/j.cell.2006.08.043 · DOI
- Martin, 2007, Diversity of the Lactobacillus group in breast milk and vagina of healthy women and potential role in the colonization of the infant gut, J Appl Microbiol, 103, 2638, 10.1111/j.1365-2672.2007.03497.x · DOI
- Martin, 2009, Isolation of bifidobacteria from breast milk and assessment of the bifidobacterial population by PCR-denaturing gradient gel electrophoresis and quantitative real-time PCR, Appl Environ Microbiol, 75, 965, 10.1128/AEM.02063-08 · DOI
- Turnbaugh, 2006, An obesity-associated gut microbiome with increased capacity for energy harvest, Nature, 444, 1027, 10.1038/nature05414 · DOI · Paper page
- Guarner, 2009, Prebiotics, probiotics and helminths: the 'natural' solution?, Dig Dis, 27, 412, 10.1159/000228582 · DOI
- Dethlefsen, 2010, Microbes and health sackler colloquium: incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation, Proc Natl Acad Sci U S A
- Antonopoulos, 2009, Reproducible community dynamics of the gastrointestinal microbiota following antibiotic perturbation, Infect Immun, 77, 2367, 10.1128/IAI.01520-08 · DOI
- Swidsinski, 2008, Bacterial biofilm suppression with antibiotics for ulcerative and indeterminate colitis: consequences of aggressive treatment, Arch Med Res, 39, 198, 10.1016/j.arcmed.2007.08.001 · DOI
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Paramsothy, S., Kamm, M. A., Kaakoush, N. O., Walsh, A. J., van den Bogaerde, J., Samuel, D., Leong, R. W. L., Connor, S., Ng, W., Paramsothy, R., et al. (2017) · The Lancet · doi:10.1016/s0140-6736(17)30182-4 · Cited by 1,276
Bäckhed, F., Fraser, C. M., Ringel, Y., Sanders, M. E., Sartor, R. B., Sherman, P. M., Versalovic, J., Young, V., & Finlay, B. B. (2012) · Cell Host & Microbe · doi:10.1016/j.chom.2012.10.012 · Cited by 836
Self-citationSartor, R. B., & Wu, G. D. (2017) · Gastroenterology · doi:10.1053/j.gastro.2016.10.012 · Cited by 808
Self-citationThe Gut Microbiome, Aging, and Longevity: A Systematic Review
Badal, V. D., Vaccariello, E. D., Murray, E. R., Yu, K. E., Knight, R., Jeste, D. V., & Nguyen, T. T. (2020) · Nutrients · doi:10.3390/nu12123759 · Cited by 551
An update on the use and investigation of probiotics in health and disease
Sanders, M. E., Guarner, F., Guerrant, R., Holt, P. R., Quigley, E. M., Sartor, R. B., Sherman, P. M., & Mayer, E. A. (2013) · Gut · doi:10.1136/gutjnl-2012-302504 · Cited by 503
Self-citationBiomarkers in inflammatory bowel disease: current practices and recent advances.
Iskandar, H. N., & Ciorba, M. A. (2012) · Translational Research · doi:10.1016/j.trsl.2012.01.001 · Cited by 210
Intestinal Microbes in Inflammatory Bowel Diseases
Sartor, R. B., & Mazmanian, S. K. (2012) · The American Journal of Gastroenterology Supplements · doi:10.1038/ajgsup.2012.4 · Cited by 206
Self-citationBaars, A., Oosting, A., Knol, J., Garssen, J., & Van Bergenhenegouwen, J. (2015) · Microorganisms · doi:10.3390/microorganisms3040641 · Cited by 135
Current Advances in Chitosan Nanoparticles Based Oral Drug Delivery for Colorectal Cancer Treatment
Choukaife, H., Seyam, S., Alallam, B., Doolaanea, A. A., & Alfatama, M. (2022) · International Journal of Nanomedicine · doi:10.2147/ijn.s375229 · Cited by 127
Sartor, R. B. (2016) · Alimentary Pharmacology & Therapeutics · doi:10.1111/apt.13436 · Cited by 60
Self-citation
Metadata
- Authors
- Sartor, R. B.
- Venue
- Gastroenterology
- Publisher
- Elsevier BV
- Published
- 2010-12
- Volume
- 139
- Issue
- 6
- Pages
- 1816-1819
- ISSN
- 0016-5085
- Cited by
- 164
- References
- 7
- Language
- en
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