Extensive diversity in circadian regulation of plasma lipids and evidence for different circadian metabolic phenotypes in humans
Open accessAbstract
The circadian system regulates daily rhythms in lipid metabolism and adipose tissue function. Although disruption of circadian clock function is associated with negative cardiometabolic end points, very little is known about interindividual variation in circadian-regulated metabolic pathways. Here, we used targeted lipidomics-based approaches to profile the time course of 263 lipids in blood plasma in 20 healthy individuals. Over a span of 28 h, blood was collected every 4 h and plasma lipids were analyzed by HPLC/MS. Across subjects, about 13% of lipid metabolites showed circadian variation. Rhythmicity spanned all metabolite classes examined, suggesting widespread circadian control of lipid-mediated energy storage, transport, and signaling. Intersubject agreement for lipids identified as rhythmic was only about 20%, however, and the timing of lipid rhythms ranged up to 12 h apart between individuals. Healthy subjects therefore showed substantial variation in the timing and strength of rhythms across different lipid species. Strong interindividual differences were also observed for rhythms of blood glucose and insulin, but not cortisol. Using consensus clustering with iterative feature selection, subjects clustered into different groups based on strength of rhythmicity for a subset of triglycerides and phosphatidylcholines, suggesting that there are different circadian metabolic phenotypes in the general population. These results have potential implications for lipid metabolism disorders linked to circadian clock disruption.
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Lipidomics analysis has identified a set of lipids that oscillate across biological subtypes defined by lipid composition.
“Lipidomics analysis has elucidated a set of lipids that oscillate across biological subtypes defined by stratification by lipid composition (11).”
From Oxalic acid and diacylglycerol 36:3 are cross-species markers of sleep debt (2015) · cites this paper as [11]
Eight species overlapped between this study and rhythmic metabolites, including LPC 16:0; triacylglycerols 52:2, 52:3, 54:3, 54:4, and 54:5; and diacylglycerols 36:2 and 36:3.
“we found eight overlapping species of significance, including LPC 16:0; triacylglycerols (TGs) (52:2, 52:3, TG 54:3, 54:4, 54:5), and diacylglycerols (DGs) (36:2, 36:3).”
From Oxalic acid and diacylglycerol 36:3 are cross-species markers of sleep debt (2015) · cites this paper as [11]
DG 36:3 is regulated in a circadian fashion in humans and may indicate both circadian time and sleep debt.
“This metabolite is also regulated in a circadian fashion in humans (11), and as such may be an indicator of both circadian time and sleep debt.”
From Oxalic acid and diacylglycerol 36:3 are cross-species markers of sleep debt (2015) · cites this paper as [11]
Under constant routine conditions in which exogenous factors are removed or fixed, only 10-20% of metabolites appear rhythmic.
“However, under constant routine conditions in which exogenous factors are removed or fixed, only 10–20% of metabolites appear rhythmic (5–7).”
From Separation of circadian- and behavior-driven metabolite rhythms in humans provides a window on peripheral oscillators and metabolism (2018) · cites this paper as [7]
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Coordinated Transcription of Key Pathways in the Mouse by the Circadian Clock
Panda, S., Antoch, M. P., Miller, B. H., Su, A. I., Schook, A. C., Straume, M., Schultz, P. G., Kay, S. A., Takahashi, J. S., & Hogenesch, J. B. (2002) · Cell · doi:10.1016/s0092-8674(02)00722-5 · Cited by 2,272 · see citing works
Monti, S., Tamayo, P., Mesirov, J., & Golub, T. (2003) · Machine Learning · doi:10.1023/a:1023949509487 · Cited by 2,116 · see citing works
High-Fat Diet Disrupts Behavioral and Molecular Circadian Rhythms in Mice
Kohsaka, A., Laposky, A. D., Ramsey, K. M., Estrada, C., Joshu, C., Kobayashi, Y., Turek, F. W., & Bass, J. (2007) · Cell Metabolism · doi:10.1016/j.cmet.2007.09.006 · Cited by 1,528 · see citing works
Extensive and divergent circadian gene expression in liver and heart
Storch, K.-F., Lipan, O., Leykin, I., Viswanathan, N., Davis, F. C., Wong, W. H., & Weitz, C. J. (2002) · Nature · doi:10.1038/nature744 · Cited by 1,509 · see citing works
Lipidomics reveals a remarkable diversity of lipids in human plasma
Quehenberger, O., Armando, A. M., Brown, A., Milne, S. B., Myers, D. S., Merrill, A. H., Bandyopadhyay, S., Jones, K. N., Kelly, S. L., Shaner, R. L., et al. (2010) · Journal of Lipid Research · doi:10.1194/jlr.m009449 · Cited by 1,322 · see citing works
Health disorders of shift workers
Knutsson, A. (2003) · Occupational Medicine · doi:10.1093/occmed/kqg048 · Cited by 1,218 · see citing works
Hughes, M. E., Hogenesch, J. B., & Kornacker, K. (2010) · Journal of Biological Rhythms · doi:10.1177/0748730410379711 · Cited by 1,087 · see citing works
Circadian timing of food intake contributes to weight gain
Arble, D. M., Bass, J., Laposky, A. D., Vitaterna, M. H., & Turek, F. W. (2009) · Obesity · doi:10.1038/oby.2009.264 · Cited by 953 · see citing works
Nuclear Receptor Expression Links the Circadian Clock to Metabolism
Yang, X., Downes, M., Yu, R. T., Bookout, A. L., He, W., Straume, M., Mangelsdorf, D. J., & Evans, R. M. (2006) · Cell · doi:10.1016/j.cell.2006.06.050 · Cited by 934 · see citing works
Green, C. B., Takahashi, J. S., & Bass, J. (2008) · Cell · doi:10.1016/j.cell.2008.08.022 · Cited by 902 · cited 1× · see citing works
“T circadian clock in the suprachiasmatic nucleus (SCN) of the hypothalamus regulates daily rhythms in behavior and physiology, ensuring that metabolic pathways are temporally coordinated with 24-h cycles of rest–activity and feeding (1).”
A transcription factor response element for gene expression during circadian night
Ueda, H. R., Chen, W., Adachi, A. A., Wakamatsu, H., Hayashi, S., Takasugi, T., Nagano, M., Nakahama, K., Suzuki, Y., Sugano, S., et al. (2002) · Nature · doi:10.1038/nature00906 · Cited by 850 · see citing works
Akhtar, R. A., Reddy, A. B., Maywood, E. S., Clayton, J. D., King, V. M., Smith, A. G., Gant, T. W., Hastings, M. H., & Kyriacou, C. P. (2002) · Current Biology · doi:10.1016/s0960-9822(02)00759-5 · Cited by 777 · see citing works
Rajaratnam, S. M., & Arendt, J. (2001) · The Lancet · doi:10.1016/s0140-6736(01)06108-6 · Cited by 711 · see citing works
Circadian Rhythms: Mechanisms and Therapeutic Implications
Levi, F., & Schibler, U. (2007) · Annual Review of Pharmacology and Toxicology · doi:10.1146/annurev.pharmtox.47.120505.105208 · Cited by 645 · see citing works
Shift work and chronic disease: the epidemiological evidence
Wang, X.-S., Armstrong, M. E. G., Cairns, B. J., Key, T. J., & Travis, R. C. (2011) · Occupational Medicine · doi:10.1093/occmed/kqr001 · Cited by 640 · see citing works
The human circadian metabolome
Dallmann, R., Viola, A. U., Tarokh, L., Cajochen, C., & Brown, S. A. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1114410109 · Cited by 566 · see citing works
Circadian orchestration of the hepatic proteome
Reddy, A. B., Karp, N. A., Maywood, E. S., Sage, E. A., Deery, M., O'Neill, J. S., Wong, G. K. Y., Chesham, J., Odell, M., Lilley, K. S., et al. (2006) · Current Biology · doi:10.1016/j.cub.2006.04.026 · Cited by 548 · see citing works
Circadian Rhythms and Metabolic Syndrome
Maury, E., Ramsey, K. M., & Bass, J. T. (2010) · Circulation Research · doi:10.1161/circresaha.109.208355 · Cited by 502 · see citing works
Characterization of Peripheral Circadian Clocks in Adipose Tissues
Zvonic, S., Ptitsyn, A. A., Conrad, S. A., Scott, L. K., Floyd, Z. E., Kilroy, G. E., Wu, X., Goh, B. C. K., Mynatt, R. L., & Gimble, J. M. (2006) · Diabetes · doi:10.2337/diabetes.55.04.06.db05-0873 · Cited by 495 · see citing works
Coordination of the transcriptome and metabolome by the circadian clock
Eckel‐Mahan, K. L., Patel, V. R., Mohney, R. P., Vignola, K. S., Baldi, P., & Sassone‐Corsi, P. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1118726109 · Cited by 370 · see citing works
Identification of the circadian transcriptome in adult mouse skeletal muscle
McCarthy, J. J., Andrews, J. L., McDearmon, E. L., Campbell, K. S., Barber, B. K., Miller, B. H., Walker, J. R., Hogenesch, J. B., Takahashi, J. S., & Esser, K. A. (2007) · Physiological Genomics · doi:10.1152/physiolgenomics.00066.2007 · Cited by 363 · see citing works
Measurement of internal body time by blood metabolomics
Minami, Y., Kasukawa, T., Kakazu, Y., Iigo, M., Sugimoto, M., Ikeda, S., Yasui, A., van der Horst, G. T. J., Soga, T., & Ueda, H. R. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0900617106 · Cited by 261 · see citing works
Jackson, K. G., Poppitt, S. D., & Minihane, A. M. (2012) · Atherosclerosis · doi:10.1016/j.atherosclerosis.2011.08.012 · Cited by 246 · see citing works
Circadian regulation of lipid mobilization in white adipose tissues
Shostak, A., Meyer-Kovac, J., & Oster, H. (2013) · Diabetes · doi:10.2337/db12-1449 · Cited by 243 · see citing works
Independent circadian and sleep/wake regulation of adipokines and glucose in humans
Shea, S. A., Hilton, M. F., Orlova, C., Ayers, R. T., & Mantzoros, C. S. (2005) · The Journal of Clinical Endocrinology & Metabolism · doi:10.1210/jc.2004-2232 · Cited by 240 · see citing works
Diurnal Variation in Glucose Tolerance and in Insulin Secretion in Man
Carroll, K. F., & Nestel, P. J. (1973) · Diabetes · doi:10.2337/diab.22.5.333 · Cited by 231 · see citing works
Human blood metabolite timetable indicates internal body time
Kasukawa, T., Sugimoto, M., Hida, A., Minami, Y., Mori, M., Honma, S., Honma, K.-I., Mishima, K., Soga, T., & Ueda, H. R. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1207768109 · Cited by 211 · see citing works
Postprandial hormone and metabolic responses in simulated shift work
Hampton, S. M., Morgan, L. M., Lawrence, N., Anastasiadou, T., Norris, F., Deacon, S., Ribeiro, D., & Arendt, J. (1996) · Journal of Endocrinology · doi:10.1677/joe.0.1510259 · Cited by 155 · cited 2× · see citing works
“Postprandial TAG levels are higher for meals taken during the night versus the day (10, 11), coinciding with a circadian increase in plasma TAG concentrations, as shown here and in other studies (5, 36).”
BackgroundResultAltered postprandial hormone and metabolic responses in a simulated shift work environment
Ribeiro, D., Hampton, S., Morgan, L., Deacon, S., & Arendt, J. (1998) · Journal of Endocrinology · doi:10.1677/joe.0.1580305 · Cited by 155 · see citing works
Kita, Y., Shiozawa, M., Weihong, J., Majewski, R. R., Besharse, J. C., Greene, A. S., & Jacob, H. J. (2002) · Pharmacogenetics · doi:10.1097/00008571-200201000-00008 · Cited by 152 · see citing works
Shui, G., Guan, X. L., Low, C. P., Chua, G. H., Goh, J. S. Y., Yang, H., & Wenk, M. R. (2010) · Molecular BioSystems · doi:10.1039/b913353d · Cited by 146 · see citing works
Self-citationEffects of the endogenous clock and sleep time on melatonin, insulin, glucose and lipid metabolism
Morgan, L., Arendt, J., Owens, D., Folkard, S., Hampton, S., Deacon, S., English, J., Ribeiro, D., & Taylor, K. (1998) · Journal of Endocrinology · doi:10.1677/joe.0.1570443 · Cited by 124 · see citing works
Aparicio, N. J., Puchulu, F., Gagliardino, J. J., Ruiz, M., Llorens, J. M. C., Ruiz, J., Lamas, A., & Miguel, R. D. (1974) · Diabetes · doi:10.2337/diab.23.2.132 · Cited by 112 · see citing works
Shui, G., Cheong, W. F., Jappar, I. A., Hoi, A., Xue, Y., Fernandis, A. Z., Tan, B. K., & Wenk, M. R. (2011) · Journal of Chromatography A · doi:10.1016/j.chroma.2011.05.011 · Cited by 98 · see citing works
Self-citationNocturnin Regulates Circadian Trafficking of Dietary Lipid in Intestinal Enterocytes
Douris, N., Kojima, S., Pan, X., Lerch-Gaggl, A. F., Duong, S. Q., Hussain, M. M., & Green, C. B. (2011) · Current Biology · doi:10.1016/j.cub.2011.07.018 · Cited by 93 · see citing works
Long‐chain polyunsaturated fatty acids in childhood developmental and psychiatric disorders
Richardson, A. J. (2004) · Lipids · doi:10.1007/s11745-004-1350-z · Cited by 86 · see citing works
Shui, G., Stebbins, J. W., Lam, B. D., Cheong, W. F., Lam, S. M., Gregoire, F. M., Kusonoki, J., & Wenk, M. R. (2011) · PLoS ONE · doi:10.1371/journal.pone.0019731 · Cited by 68 · see citing works
Self-citationChronobiology and chronotherapy of ischemic heart disease
Portaluppi, F., & Lemmer, B. (2007) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2006.07.029 · Cited by 65 · see citing works
The role of circadian clocks in metabolic disease.
Li, M., Li, C.-M., & Wang, Z. (2012) · Europe PMC (PubMed Central) · Cited by 52 · see citing works
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Time for food: the intimate interplay between nutrition, metabolism, and the circadian clock
Asher, G., & Sassone-Corsi, P. (2015) · Cell · doi:10.1016/j.cell.2015.03.015 · Cited by 844 · see citing works
Circadian timing of metabolism in animal models and humans
Dibner, C., & Schibler, U. (2015) · Journal of Internal Medicine · doi:10.1111/joim.12347 · Cited by 237 · see citing works
Skene, D. J., Skornyakov, E., Chowdhury, N. R., Gajula, R. P., Middleton, B., Satterfield, B. C., Porter, K. I., Van Dongen, H. P. A., & Gaddameedhi, S. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1801183115 · Cited by 176 · see citing works
Human resting energy expenditure varies with circadian phase
Zitting, K.-M., Vujovic, N., Yuan, R. K., Isherwood, C. M., Medina, J. E., Wang, W., Buxton, O. M., Williams, J. S., Czeisler, C. A., & Duffy, J. F. (2018) · Current Biology · doi:10.1016/j.cub.2018.10.005 · Cited by 164 · see citing works
Oxalic acid and diacylglycerol 36:3 are cross-species markers of sleep debt
Weljie, A. M., Meerlo, P., Goel, N., Sengupta, A., Kayser, M. S., Abel, T., Birnbaum, M. J., Dinges, D. F., & Sehgal, A. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1417432112 · Cited by 158 · see citing works
Aho, V., Ollila, H. M., Kronholm, E., Bondia-Pons, I., Soininen, P., Kangas, A. J., Hilvo, M., Seppälä, I., Kettunen, J., Oikonen, M., et al. (2016) · Scientific Reports · doi:10.1038/srep24828 · Cited by 126 · see citing works
Lipids around the Clock: Focus on Circadian Rhythms and Lipid Metabolism
Gnocchi, D., Pedrelli, M., Hurt-Camejo, E., & Parini, P. (2015) · Biology · doi:10.3390/biology4010104 · Cited by 115 · see citing works
Developing Biomarker Arrays Predicting Sleep and Circadian-Coupled Risks to Health
Mullington, J. M., Abbott, S. M., Carroll, J. E., Davis, C. J., Dijk, D.-J., Dinges, D. F., Gehrman, P. R., Ginsburg, G. S., Gozal, D., Haack, M., et al. (2016) · Sleep · doi:10.5665/sleep.5616 · Cited by 105 · see citing works
- Authors
- Chua, E. C.-P., Shui, G., Lee, I. T.-G., Lau, P., Tan, L.-C., Yeo, S.-C., Lam, B. D., Bulchand, S., Summers, S. A., Puvanendran, K., Rozen, S. G., Wenk, M. R., & Gooley, J. J.
- Affiliations
- National University of Singapore (SG)
- National Neuroscience Institute (SG)
- Program in Neuroscience and Behavioral Disorders, Duke–National University of Singapore Graduate Medical School, Singapore 169857;
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2013-08-14
- Volume
- 110
- Issue
- 35
- Pages
- 14468-14473
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC3761633
- OpenAlex
- W2014163381
- Cited by
- 221
- References
- 39
- Citations by year
- 2026: 7 · 2025: 11 · 2024: 16 · 2023: 22 · 2022: 18 · 2021: 22 · 2020: 28 · 2019: 20 · 2018: 19 · 2017: 18 · 2016: 17 · 2015: 14 · 2014: 9
- FWCI
- 7.20
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- National University of Singapore (submittedVersion)
- Topics
- Life Sciences › Neuroscience › Endocrine and Autonomic Systems › Circadian rhythm and melatonin
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Metabolomics and Mass Spectrometry Studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biochemistry › Lipid metabolism and biosynthesis
- Keywords
- circadian rhythm, plasma lipids, lipid metabolism, circadian clock, interindividual variability, triglycerides, phosphatidylcholine, blood glucose, insulin, cortisol, circadian clock disruption, lipidomics
- MeSH terms
- Adult, Blood Glucose, Chromatography, High Pressure Liquid, Circadian Rhythm, Humans, Insulin, Lipids, Male, Phenotype, Mass Spectrometry, Young Adult
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