Nucleotide Excision Repair

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MISMATCH REPAIR IN REPLICATION FIDELITY, GENETIC RECOMBINATION, AND CANCER BIOLOGY

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Transcription regulation and animal diversity

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The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase η

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Structure and Function of DNA Photolyase and Cryptochrome Blue-Light Photoreceptors

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DNA repair in an active gene: removal of pyrimidine dimers from the DHFR gene of CHO cells is much more efficient than in the genome overall

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Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene

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DNA excision repair

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ALTERATION OF NUCLEOSOME STRUCTURE AS A MECHANISM OF TRANSCRIPTIONAL REGULATION

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DNA Replication Fidelity

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Two related superfamilies of putative helicases involved in replication, recombination, repair and expression of DNA and RNA genomes

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THE DISAPPEARANCE OF THYMINE DIMERS FROM DNA: AN ERROR-CORRECTING MECHANISM

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Xeroderma Pigmentosum Group C Protein Complex Is the Initiator of Global Genome Nucleotide Excision Repair

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DNA Repair Helicase: a Component of BTF2 (TFIIH) Basic Transcription Factor

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Kinetic amplification of enzyme discrimination

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The Ubiquitin Ligase Activity in the DDB2 and CSA Complexes Is Differentially Regulated by the COP9 Signalosome in Response to DNA Damage

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<i>hRAD30</i> Mutations in the Variant Form of Xeroderma Pigmentosum

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ERCC6, a member of a subfamily of putative helicases, is involved in Cockayne's syndrome and preferential repair of active genes

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Error-Prone Repair DNA Polymerases in Prokaryotes and Eukaryotes

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RELEASE OF ULTRAVIOLET LIGHT-INDUCED THYMINE DIMERS FROM DNA IN E. COLI K-12

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Molecular Mechanism of Transcription-Repair Coupling

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A novel repair enzyme: UVRABC excision nuclease of Escherichia coli cuts a DNA strand on both sides of the damaged region

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Biochemistry and genetics of eukaryotic mismatch repair.Preprint

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Expression of the <i>p48</i> xeroderma pigmentosum gene is p53-dependent and is involved in global genomic repair

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Induction of the Escherichia coli lactose operon selectively increases repair of its transcribed DNA strand

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Conserved domains in DNA repair proteins and evolution of repair systems

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The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA.

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Xeroderma Pigmentosum Group F Caused by a Defect in a Structure-Specific DNA Repair Endonuclease

Sijbers, A. M., de Laat, W. L., Ariza, R. R., Biggerstaff, M., Wei, Y.-F., Moggs, J. G., Carter, K. C., Shell, B. K., Evans, E. L., de Jong, M. C., et al. (1996) · Cell · doi:10.1016/s0092-8674(00)80155-5 · Cited by 546 · see citing works

The Cockayne syndrome group A gene encodes a WD repeat protein that interacts with CSB protein and a subunit of RNA polymerase II TFIIH

Henning, K. A., Li, L., Iyer, N., McDaniel, L. D., Reagan, M. S., Legerski, R., Schultz, R. A., Stefanini, M., Lehmann, A. R., Mayne, L. V., et al. (1995) · Cell · doi:10.1016/0092-8674(95)90028-4 · Cited by 507 · see citing works

Mechanism of open complex and dual incision formation by human nucleotide excision repair factors

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The Structure-Specific Endonuclease Ercc1-Xpf Is Required To Resolve DNA Interstrand Cross-Link-Induced Double-Strand Breaks

Niedernhofer, L. J., Odijk, H., Budzowska, M., van Drunen, E., Maas, A., Theil, A. F., de Wit, J., Jaspers, N. G. J., Beverloo, H. B., Hoeijmakers, J. H. J., et al. (2004) · Molecular and Cellular Biology · doi:10.1128/mcb.24.13.5776-5787.2004 · Cited by 493 · see citing works

XPG endonuclease makes the 3′ incision in human DNA nucleotide excision repair

O’Donovan, A., Davies, A. A., Moggs, J. G., West, S. C., & Wood, R. D. (1994) · Nature · doi:10.1038/371432a0 · Cited by 487 · see citing works

Dual role of TFIIH in DNA excision repair and in transcription by RNA polymerase II

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Reconstitution of Human DNA Repair Excision Nuclease in a Highly Defined System

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A phylogenomic study of DNA repair genes, proteins, and processes

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Rad23 links DNA repair to the ubiquitin/proteasome pathway

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Subpathways of nucleotide excision repair and their regulation

Hanawalt, P. C. (2002) · Oncogene · doi:10.1038/sj.onc.1206096 · Cited by 447 · see citing works

Nucleotide Excision Repair in Mammalian Cells

Wood, R. D. (1997) · Journal of Biological Chemistry · doi:10.1074/jbc.272.38.23465 · Cited by 444 · see citing works

Human nucleotide excision nuclease removes thymine dimers from DNA by incising the 22nd phosphodiester bond 5' and the 6th phosphodiester bond 3' to the photodimer.

Huang, J. C., Svoboda, D. L., Reardon, J. T., & Sancar, A. (1992) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.89.8.3664 · Cited by 437 · see citing works

A presumed DNA helicase encoded by ERCC-3 is involved in the human repair disorders xeroderma pigmentosum and Cockayne's syndrome

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A multistep damage recognition mechanism for global genomic nucleotide excision repair

Sugasawa, K., Okamoto, T., Shimizu, Y., Masutani, C., Iwai, S., & Hanaoka, F. (2001) · Genes &amp; Development · doi:10.1101/gad.866301 · Cited by 435 · see citing works

Increased Susceptibility to Ultraviolet-B and Carcinogens of Mice Lacking the DNA Excision Repair Gene XPA

Vries, A. D., van Oostrom, C. T. M., Hofhuis, F. M. A., Dortant, P. M., Berg, R. J. W., Gruijl, F. R. D., Wester, P. W., van Kreijl, C. F., Capel, P. J. A., Steeg, H. V., et al. (1995) · Nature · doi:10.1038/377169a0 · Cited by 406 · see citing works

Purification and cloning of a nucleotide excision repair complex involving the xeroderma pigmentosum group C protein and a human homologue of yeast RAD23.

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RPA involvement in the damage-recognition and incision steps of nucleotide excision repair

He, Z., Henricksen, L. A., Wold, M. S., & Ingles, C. J. (1995) · Nature · doi:10.1038/374566a0 · Cited by 389 · see citing works

Analysis of a human DNA excision repair gene involved in group A xeroderma pigmentosum and containing a zinc-finger domain

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Human STAGA Complex Is a Chromatin-Acetylating Transcription Coactivator That Interacts with Pre-mRNA Splicing and DNA Damage-Binding Factors In Vivo

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ERCC1/XPF Removes the 3′ Overhang from Uncapped Telomeres and Represses Formation of Telomeric DNA-Containing Double Minute Chromosomes

Zhu, X., Niedernhofer, L. J., Küster, B., Mann, M., Hoeijmakers, J. H. J., & de Lange, T. (2003) · Molecular Cell · doi:10.1016/s1097-2765(03)00478-7 · Cited by 382 · see citing works

The ERCC2/DNA repair protein is associated with the class II BTF2/TFIIH transcription factor.

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Disruption of mouse ERCC1 results in a novel repair syndrome with growth failure, nuclear abnormalities and senescence

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Initiation of Base Excision Repair: Glycosylase Mechanisms and Structures

McCullough, A. K., Dodson, M. L., & Lloyd, R. S. (1999) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.68.1.255 · Cited by 380 · see citing works

Mechanisms of transcription-coupled DNA repair

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Replication protein A interacts with AID to promote deamination of somatic hypermutation targets

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Reaction Mechanism of Human DNA Repair Excision Nuclease

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Nucleotide excision repair in yeast

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ATP-Dependent Chromatin Remodeling by the Cockayne Syndrome B DNA Repair-Transcription-Coupling Factor

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<i>In vitro</i> repair of oxidative DNA damage by human nucleotide excision repair system: Possible explanation for neurodegeneration in Xeroderma pigmentosum patients

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Mutations in the XPD helicase gene result in XP and TTD phenotypes, preventing interaction between XPD and the p44 subunit of TFIIH

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Translesion DNA synthesis in eukaryotes: A one- or two-polymerase affair

Prakash, S., & Prakash, L. (2002) · Genes &amp; Development · doi:10.1101/gad.1009802 · Cited by 344 · see citing works

Centrosome Protein Centrin 2/Caltractin 1 Is Part of the Xeroderma Pigmentosum Group C Complex That Initiates Global Genome Nucleotide Excision Repair

Araki, M., Masutani, C., Takemura, M., Uchida, A., Sugasawa, K., Kondoh, J., Ohkuma, Y., & Hanaoka, F. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m100855200 · Cited by 335 · see citing works

Nucleotide excision repair of DNA with recombinant human proteins: definition of the minimal set of factors, active forms of TFIIH, and modulation by CAKPreprint

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A new, tenth subunit of TFIIH is responsible for the DNA repair syndrome trichothiodystrophy group A

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DNA-binding polarity of human replication protein A positions nucleases in nucleotide excision repairPreprint

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Mice with DNA repair gene (ERCC-1) deficiency have elevated levels of p53, liver nuclear abnormalities and die before weaning

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THE SOS RESPONSE: Recent Insights into umuDC -Dependent Mutagenesis and DNA Damage Tolerance

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Cockayne syndrome group B protein enhances elongation by RNA polymerase II

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E. coli Transcription Repair Coupling Factor (Mfd Protein) Rescues Arrested Complexes by Promoting Forward Translocation

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Specific association between the human DNA repair proteins XPA and ERCC1.

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Reconstitution of the Transcription Factor TFIIH

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Molecular cloning of a human DNA repair gene

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Base Excision Repair of Oxidative DNA Damage Activated by XPG Protein

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Preferential binding of the xeroderma pigmentosum group A complementing protein to damaged DNA

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Rad23 Promotes the Targeting of Proteolytic Substrates to the Proteasome

Chen, L., & Madura, K. (2002) · Molecular and Cellular Biology · doi:10.1128/mcb.22.13.4902-4913.2002 · Cited by 291 · see citing works

High incidence of ultraviolet-B-or chemical-carcinogen-induced skin tumours in mice lacking the xeroderma pigmentosum group A gene

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Cellular machineries for chromosomal DNA repairPreprint

Peterson, C. L., & Côté, J. (2004) · Genes & Development · doi:10.1101/gad.1182704 · Cited by 287 · see citing works

Efficient nucleotide excision repair of cisplatin, oxaliplatin, and Bis-aceto-ammine-dichloro-cyclohexylamine-platinum(IV) (JM216) platinum intrastrand DNA diadducts.

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Functional domains within FEN-1 and RAD2 define a family of structure-specific endonucleases: implications for nucleotide excision repair.Preprint

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Repair of an Interstrand DNA Cross-link Initiated by ERCC1-XPF Repair/Recombination Nuclease

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The Xeroderma Pigmentosum Group C Protein Complex XPC-HR23B Plays an Important Role in the Recruitment of Transcription Factor IIH to Damaged DNA

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Light and dark in chromatin repair: repair of UV‐induced DNA lesions by photolyase and nucleotide excision repair

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Human Transcription-Repair Coupling Factor CSB/ERCC6 Is a DNA-stimulated ATPase but Is Not a Helicase and Does Not Disrupt the Ternary Transcription Complex of Stalled RNA Polymerase II

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ERCC2: cDNA cloning and molecular characterization of a human nucleotide excision repair gene with high homology to yeast RAD3.

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A novel regulation mechanism of DNA repair by damage-induced and RAD23-dependent stabilization of xeroderma pigmentosum group C proteinPreprint

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An Interaction between the DNA Repair Factor XPA and Replication Protein A Appears Essential for Nucleotide Excision Repair

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