KEGG: Kyoto Encyclopedia of Genes and Genomes

Ogata, H., Goto, S., Sato, K., Fujibuchi, W., Bono, H., Kanehisa, M.·1999·Nucleic Acids Research
DOI 10.1093/nar/27.1.29

Cited by (442)

Items 401–442 of 442

  1. Gene set enrichment analysis to create polygenic scores: a developmental examination of aggression
    Elam, Kit K., Clifford, Sierra, Shaw, Daniel S., Wilson, Melvin N., Lemery-Chalfant, Kathryn · 2019 · Translational Psychiatry
  2. Data integration across conditions improves turnover number estimates and metabolic predictions
    Wendering, Philipp, Arend, Marius, Razaghi-Moghadam, Zahra, Nikoloski, Zoran · 2023 · Nature Communications
  3. Identification of viral-mediated pathogenic mechanisms in neurodegenerative diseases using network-based approaches
    Onisiforou, Anna, Spyrou, George M · 2021 · Briefings in Bioinformatics
  4. Plastic biodegradation by sediment microbial populations under denitrifying conditions
    Sun, Xiaoxu, Wang, Shuni, Lin, Zhiyuan, Chen, Zhenyu, Huang, Wei, Kong, Tianle, Huang, Duanyi, Li, Baoqin, Zhang, Haihan, Sun, Weimin · 2025 · Environmental Science & Technology
  5. Integrated Microbiome and Host Transcriptome Profiles Link Parkinson’s Disease to Blautia Genus: Evidence From Feces, Blood, and Brain
    Guo, Xingzhi, Tang, Peng, Hou, Chen, Chong, Li, Zhang, Xin, Liu, Peng, Chen, Li, Liu, Yue, Zhang, Lina, Li, Rui · 2022 · Frontiers in Microbiology
  6. Data mining for potential adverse drug–drug interactions
    Hammann, Felix, Drewe, Juergen · 2014 · Expert Opinion on Drug Metabolism & Toxicology
  7. <i>Proteus mirabilis</i> UreR coordinates cellular functions required for urease activity
    Fitzgerald, Madison J., Pearson, Melanie M., Mobley, Harry L. T. · 2024 · Journal of Bacteriology
  8. Positive and negative feedback regulation of the TGF-β1 explains two equilibrium states in skin aging
    Haga, Masatoshi, Iida, Keita, Okada, Mariko · 2024 · iScience
  9. JDSNMF: Joint Deep Semi-Non-Negative Matrix Factorization for Learning Integrative Representation of Molecular Signals in Alzheimer’s Disease
    Moon, Sehwan, Lee, Hyunju · 2021 · Journal of Personalized Medicine
  10. Deep proteomic analysis on biobanked paraffine-archived melanoma with prognostic/predictive biomarker read-out
    Szadai, Leticia, Velasquez, Erika, Szeitz, Beáta, Almeida, Natália Pinto de, Domont, Gilberto, Betancourt, Lazaro Hiram, Gil, Jeovanis, Marko-Varga, Matilda, Oskolas, Henriett, Jánosi, Ágnes Judit et al. · 2021 · Cancers
  11. Unraveling the Phenotypic and Genomic Background of Behavioral Plasticity and Temperament in North American Angus Cattle
    Alvarenga, Amanda B., Oliveira, Hinayah R., Turner, Simon P., Garcia, Andre, Retallick, Kelli J., Miller, Stephen P., Brito, Luiz F. · 2023 · Genetics Selection Evolution
  12. Single-cell and machine learning approaches uncover intrinsic immune-evasion genes in the prognosis of hepatocellular carcinoma
    Wang, Jiani, Chen, Xiaopeng, Wu, Donghao, Jia, Changchang, Lian, Qinghai, Pan, Yuhang, Yang, Jiumei · 2024 · Liver Research
  13. DeepRF: A deep learning method for predicting metabolic pathways in organisms based on annotated genomes
    Shah, Hayat Ali, Liu, Juan, Yang, Zhihui, Zhang, Xiaolei, Feng, Jing · 2022 · Computers in Biology and Medicine
  14. Genomic and functional diversity of the human-derived isolates of Faecalibacterium
    Li, Wenxi, Lin, Xiaoqian, Liang, Hewei, Wu, Zhinan, Wang, Mengmeng, Sun, Jingxi, Li, Xiaofang, He, Wenxin, Gao, Xiaowei, Hu, Tongyuan et al. · 2024 · Frontiers in Microbiology
  15. Tremorgenic effects and functional metabolomics analysis of lolitrem B and its biosynthetic intermediates
    Reddy, Priyanka, Rochfort, Simone, Read, Elizabeth, Deseo, Myrna, Jaehne, Emily, Van Den Buuse, Maarten, Guthridge, Kathryn, Combs, Martin, Spangenberg, German, Quinn, Jane · 2019 · Scientific Reports
  16. Global profiling of lysine acetylation in human histoplasmosis pathogen Histoplasma capsulatum
    Xie, Longxiang, Fang, Wenjie, Deng, Wanyan, Yu, Zhaoxiao, Li, Juan, Chen, Min, Liao, Wanqing, Xie, Jianping, Pan, Weihua · 2016 · The International Journal of Biochemistry &amp; Cell Biology
  17. Expression and alternative splicing of folate pathway genes in HapMap lymphoblastoid cell lines
    Duan, Shiwei, Huang, R Stephanie, Zhang, Wei, Mi, Shuangli, Bleibel, Wasim K, Kistner, Emily O, Cox, Nancy J, Dolan, M Eileen · 2009 · Pharmacogenomics
  18. Metabolites Associated with Early Cognitive Changes Implicated in Alzheimer’s Disease
    Darst, Burcu F., Huo, Zhiguang, Jonaitis, Erin M., Koscik, Rebecca L., Clark, Lindsay R., Lu, Qiongshi, Kremen, William S., Franz, Carol E., Rana, Brinda, Lyons, Michael J. et al. · 2021 · Journal of Alzheimer’s Disease
  19. Viruses of sulfur oxidizing phototrophs encode genes for pigment, carbon, and sulfur metabolisms
    Hesketh-Best, Poppy J., Bosco-Santos, Alice, Garcia, Sofia L., O’Beirne, Molly D., Werne, Josef P., Gilhooly, William P., Silveira, Cynthia B. · 2023 · Communications Earth &amp; Environment
  20. csuWGCNA: a combination of signed and unsigned WGCNA to capture negative correlations
    Dai, Rujia, Xia, Yan, Liu, Chunyu, Chen, Chao · 2018
  21. Effects of Functional Bias on Supervised Learning of a Gene Network Model
    Lee, Insuk, Marcotte, Edward M. · 2009 · Methods in Molecular Biology
  22. Network-Free Inference of Knockout Effects in Yeast
    Peleg, Tal, Yosef, Nir, Ruppin, Eytan, Sharan, Roded · 2010 · PLoS Computational Biology
  23. Pathway Analysis Integrating Genome-Wide and Functional Data Identifies <i>PLCG2</i> as a Candidate Gene for Age-Related Macular Degeneration
    Waksmunski, Andrea R., Grunin, Michelle, Kinzy, Tyler G., Igo, Robert P., Haines, Jonathan L., Cooke Bailey, Jessica N., for the International Age-Related Macular Degeneration Genomics Consortium · 2019 · Investigative Opthalmology &amp; Visual Science
  24. CD300E+ macrophages facilitate liver regeneration after splenectomy in decompensated cirrhotic patients
    Yang, Tao, Zhang, Yuan, Duan, Chujun, Liu, Hui, Wang, Dong, Liang, Qingshan, Chen, Xiao, Ma, Jingchang, Cheng, Kun, Chen, Yong et al. · 2025 · Experimental &amp; Molecular Medicine
  25. Network spectra for drug-target identification in complex diseases: new guns against old foes
    Rai, Aparna, Shinde, Pramod, Jalan, Sarika · 2018 · Applied Network Science
  26. MicroRNA Profiling in Aging Brain of PSEN1/PSEN2 Double Knockout Mice
    Ham, Suji, Kim, Tae Kyoo, Lee, Sangjoon, Tang, Ya-Ping, Im, Heh-In · 2018 · Molecular Neurobiology
  27. Mechanosensitive ion channel-related genes in hepatocellular carcinoma: Unraveling prognostic genes and their roles in drug resistance and immune modulation
    Huo, Xinyan, Jiang, Shiyu, Wu, Sihuang, Lian, Qinghai, Chen, Hui · 2025 · Liver Research
  28. Molecular Mechanisms of Radiation Resistance in Breast Cancer: A Systematic Review of Radiosensitization Strategies
    Mageau, Emma, Derbowka, Ronan, Dickinson, Noah, Lefort, Natalie, Kovala, A. Thomas, Boreham, Douglas R., Tai, T. C., Thome, Christopher, Tharmalingam, Sujeenthar · 2025 · Current Issues in Molecular Biology
  29. Bioinformatics analysis of microarray data to reveal the pathogenesis of brain ischemia
    He, Jiaxuan, Gao, Ya, Wu, Gang, Lei, Xiaoming, Zhang, Yong, Pan, Weikang, Yu, Hui · 2018 · Molecular Medicine Reports
  30. Assessment of the safety and efficacy of an oral probiotic-based vaccine against Aspergillus infection in captive-bred Humboldt penguins (Spheniscus humboldti)
    Thorel, Milan, Mateos-Hernandez, Lourdes, Mulot, Baptiste, Azzouni, Mouna Naila, Hodžić, Adnan, Gaillot, Hugues, Ruel, Yannick, Desoubeaux, Guillaume, Delaye, Jean-Baptiste, Obregon, Dasiel et al. · 2022 · Frontiers in Immunology
  31. Using network extracted ontologies to identify novel genes with roles in appressorium development in the rice blast fungus magnaporthe oryzae
    Ames, Ryan · 2017 · Microorganisms
  32. Extracting reaction networks from databases—opening Pandora’s box
    Fearnley, L. G., Davis, M. J., Ragan, M. A., Nielsen, L. K. · 2014 · Briefings in Bioinformatics
  33. Metabolic network segmentation: a probabilistic graphical modeling approach to identify the sites and sequential order of metabolic regulation from non-targeted metabolomics data
    Kuehne, Andreas, Mayr, Urs, Sévin, Daniel C., Claassen, Manfred, Zamboni, Nicola · 2017 · PLoS Computational Biology
  34. Whole genome analysis and in vivo safety assessment of probiotic candidate Lactobacillus acidophilus L177
    Liu, Yunjiang, Zheng, Haohong, Wang, Jiali, Xin, Jialiang, Wu, Ruihu, Zhang, Jingyi, Zhong, Zhijun, Liu, Haifeng, Huang, Yixin, Fu, Hualin et al. · 2025 · BMC Microbiology
  35. Resource constrained flux balance analysis predicts selective pressure on the global structure of metabolic networks
    Abedpour, Nima, Kollmann, Markus · 2015 · BMC Systems Biology
  36. CHEK2 knockout is a therapeutic target for TP53-mutated hepatocellular carcinoma
    Chen, Yuyan, Zhu, Zhengyi, Wu, Xingyu, Li, Hui, Guan, Wenxian, Ren, Haozhen · 2024 · Cell Death Discovery
  37. Metabolomic alterations in mammary glands from pubertal mice fed a high-fat diet
    Yan, Lin, Rust, Bret M, Sundaram, Sneha, Bukowski, Michael R · 2023 · Nutrition and Metabolic Insights
  38. Integrated bioinformatics analysis of noncoding RNAs with tumor immune microenvironment in gastric cancer
    Xu, Jun, Hu, Shengnan, Chen, Qiuli, Shu, Lilu, Wang, Peter, Wang, Jianjiang · 2023 · Scientific Reports
  39. Integrated multi omics and machine learning reveal mitochondrial immunometabolic networks in sepsis associated encephalopathy
    Zhang, Zhenze, Qiu, Xinliang, Zeng, Xing, Liu, Xinhai, Lu, Jiali, Xu, Caixue, Huang, Jing, Zhao, Caiqing, Zhan, Yian · 2025 · Scientific Reports
  40. Chromosome-level genome assembly of the glass catfish (&lt;i&gt;Kryptopterus vitreolus&lt;/i&gt;) reveals molecular clues to its transparent phenotype
    Bian, Chao, 深圳大学生命与海洋科学学院水产基因组学实验室, 广东 深圳 518057, 中国, Laboratory of Aquatic Genomics, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, Guangdong 518057, China, Li, Rui-Han, Ruan, Zhi-Qiang, Chen, Wei-Ting, Huang, Yu, Liu, Li-Yue, Zhou, Hong-Ling, Chong, Cheong-Meng et al. · 2024 · Zoological Research
  41. Transcriptomic Signatures of Single-Suture Craniosynostosis Phenotypes
    Lapehn, Samantha, Gustafson, Jonas A., Timms, Andrew E., Cunningham, Michael L., Paquette, Alison G. · 2023 · International Journal of Molecular Sciences
  42. MicroRNA Transcriptomes Reveal Prevalence of Rare and Species-Specific Arm Switching Events During Zebrafish Ontogenesis
    Oliveira, Arthur Casulli de, Bovolenta, Luiz Augusto, Figueiredo, Lucas, Ribeiro, Amanda De Oliveira, Pereira, Beatriz Jacinto Alves, de Almeida, Talita Roberto Aleixo, Campos, Vinicius Farias, Patton, James G, Pinhal, Danillo · 2024 · Evolutionary Bioinformatics