The human checkpoint sensor Rad9–Rad1–Hus1 interacts with and stimulates DNA repair enzyme TDG glycosylase
Open accessAbstract
Human (h) DNA repair enzyme thymine DNA glycosylase (hTDG) is a key DNA glycosylase in the base excision repair (BER) pathway that repairs deaminated cytosines and 5-methyl-cytosines. The cell cycle checkpoint protein Rad9-Rad1-Hus1 (the 9-1-1 complex) is the surveillance machinery involved in the preservation of genome stability. In this study, we show that hTDG interacts with hRad9, hRad1 and hHus1 as individual proteins and as a complex. The hHus1 interacting domain is mapped to residues 67-110 of hTDG, and Val74 of hTDG plays an important role in the TDG-Hus1 interaction. In contrast to the core domain of hTDG (residues 110-308), hTDG(67-308) removes U and T from U/G and T/G mispairs, respectively, with similar rates as native hTDG. Human TDG activity is significantly stimulated by hHus1, hRad1, hRad9 separately, and by the 9-1-1 complex. Interestingly, the interaction between hRad9 and hTDG, as detected by co-immunoprecipitation (Co-IP), is enhanced following N-methyl-N'-nitro-N-nitrosoguanidine (MNNG) treatment. A significant fraction of the hTDG nuclear foci co-localize with hRad9 foci in cells treated with methylating agents. Thus, the 9-1-1 complex at the lesion sites serves as both a damage sensor to activate checkpoint control and a component of the BER.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The 9-1-1 complex interacts with BER proteins APE1, Pol β, FEN1, DNA ligase I, and DNA glycosylases MutY, NEIL1, and TDG, stimulating their DNA repair activities.
“As a critical component of ATR-Chk1 checkpoint pathway, the 9-1-1 complex interacts with several BER proteins: APE1, Polymerase β (Pol β), FEN1, DNA ligase I, as well as DNA glycosylases MutY, NEIL1, and TDG, thereby stimulating their DNA repair activities [177–185] (Fig. 3).”
From Functional interplay between ATM/ATR-mediated DNA damage response and DNA repair pathways in oxidative stress (2014) · cites this paper as [185]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Towbin, H., Staehelin, T., & Gordon, J. (1979) · Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.76.9.4350 · Cited by 51,421 · see citing works
Raza, H., John, A., & Nemmar, A. (2013) · Cellular Physiology and Biochemistry · doi:10.1159/000350087 · Cited by 47,311 · see citing works
Protein secondary structure prediction based on position-specific scoring matrices.
Jones, D. C. (1999) · Journal of Molecular Biology · doi:10.1006/jmbi.1999.3091 · Cited by 5,741 · see citing works
Intrinsically unstructured proteins and their functions
Dyson, H. J., & Wright, P. E. (2005) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm1589 · Cited by 3,871 · see citing works
Molecular Mechanisms of Mammalian DNA Repair and the DNA Damage Checkpoints
Sancar, A., Lindsey-Boltz, L. A., Ünsal-Kaçmaz, K., & Linn, S. (2004) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.73.011303.073723 · Cited by 3,317 · see citing works
The DNA damage response: putting checkpoints in perspective
Zhou, B.-B. S., & Elledge, S. J. (2000) · Nature · doi:10.1038/35044005 · Cited by 3,213 · see citing works
Sensing DNA Damage Through ATRIP Recognition of RPA-ssDNA Complexes
Zou, L., & Elledge, S. J. (2003) · Science · doi:10.1126/science.1083430 · Cited by 2,693 · see citing works
Hartwell, L. H., & Kastan, M. B. (1994) · Science · doi:10.1126/science.7997877 · Cited by 2,523 · see citing works
Liu, Q., Guntuku, S., Cui, X.-S., Matsuoka, S., Cortez, D., Tamai, K., Luo, G., Carattini-Rivera, S., DeMayo, F., Bradley, A., et al. (2000) · Genes & Development · doi:10.1101/gad.14.12.1448 · Cited by 1,625 · see citing works
MISMATCH REPAIR IN REPLICATION FIDELITY, GENETIC RECOMBINATION, AND CANCER BIOLOGY
Modrich, P. L., & Lahue, R. S. (1996) · Annual Review of Biochemistry · doi:10.1146/annurev.bi.65.070196.000533 · Cited by 1,510 · see citing works
Lindahl, T. L., & Wood, R. D. (1999) · Science · doi:10.1126/science.286.5446.1897 · Cited by 1,489 · see citing works
Friedberg, E. C. (2003) · Nature · doi:10.1038/nature01408 · Cited by 1,177 · see citing works
<i>ATR</i> disruption leads to chromosomal fragmentation and early embryonic lethality
Brown, E. J., & Baltimore, D. (2000) · Genes & Development · doi:10.1101/gad.14.4.397 · Cited by 951 · see citing works
Defects in a cell cycle checkpoint may be responsible for the genomic instability of cancer cells
Hartwell, L. H. (1992) · Cell · doi:10.1016/0092-8674(92)90586-2 · Cited by 770 · see citing works
Checking on DNA damage in S phase
Bartek, J., Lukas, C., & Lukas, J. (2004) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm1493 · Cited by 758 · see citing works
DNA-bound structures and mutants reveal abasic DNA binding by APE1 DNA repair and coordination
Mol, C. D., Izumi, T., MITRA, S. P., & Tainer, J. A. (2000) · Nature · doi:10.1038/35000249 · Cited by 756 · see citing works
Pegg, A. E. (1990) · PubMed · Cited by 734 · see citing works
Chevray, P. M., & Nathans, D. (1992) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.89.13.5789 · Cited by 526 · see citing works
Aberrant cell cycle checkpoint function and early embryonic death in Chk1−/− micePreprint
Takai, H., Tominaga, K., Motoyama, N., Minamishima, Y. A., Nagahama, H., Tsukiyama, T., Ikeda, K., Nakayama, K., Nakanishi, M., & Nakayama, K. (2000) · Genes & Development · doi:10.1101/gad.14.12.1439 · Cited by 478 · see citing works
Predicting intrinsic disorder from amino acid sequence
Zoran Obradovic, A., Peng, K., Vučetić, S., Predrag Radivojac, A., Brown, C. J., & Dunker, A. K. (2003) · Proteins Structure Function and Bioinformatics · doi:10.1002/prot.10532 · Cited by 455 · see citing works
In vivo mutagenesis by O6-methylguanine built into a unique site in a viral genome.
Loechler, E. L., Green, C. L., & Essigmann, J. M. (1984) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.81.20.6271 · Cited by 445 · see citing works
Two checkpoint complexes are independently recruited to sites of DNA damage in vivo
Melo, J. A., Cohen, J., & Toczyski, D. P. (2001) · Genes & Development · doi:10.1101/gad.903501 · Cited by 384 · see citing works
Ellison, V., & Stillman, B. (2003) · PLoS Biology · doi:10.1371/journal.pbio.0000033 · Cited by 363 · see citing works
Passing the baton in base excision repair.
Kunkel, T. A., & Wilson, S. H. (2000) · Nature Structural Biology · doi:10.1038/73260 · Cited by 345 · see citing works
Guan, Y., Manuel, R. C., Arvai, A. S., Parikh, S. S., Mol, C. D., Miller, J. H., Lloyd, R. S., & Tainer, J. A. (1998) · Nature Structural Biology · doi:10.1038/4168 · Cited by 325 · see citing works
Bermudez, V. P., Lindsey-Boltz, L. A., Cesare, A. J., Maniwa, Y., Griffith, J. D., Hurwitz, J., & Sancar, A. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0437927100 · Cited by 324 · see citing works
Hardeland, U., Steinacher, R., Jiricny, J., & Schär, P. (2002) · The EMBO Journal · doi:10.1093/emboj/21.6.1456 · Cited by 320 · see citing works
Krawczak, M., Ball, E. V., & Cooper, D. N. (1998) · The American Journal of Human Genetics · doi:10.1086/301965 · Cited by 319 · see citing works
Functional sites of interaction between release factor RF1 and the ribosome.
Wilson, K. S., Nakamura, Y., Ito, K., & Noller, H. F. (2000) · Nature Structural Biology · doi:10.1038/82818 · Cited by 309 · see citing works
ATR Kinase Activation Mediated by MutSα and MutLα in Response to Cytotoxic O6-Methylguanine Adducts
Yoshioka, K.-I., Yoshioka, Y., & Hsieh, P. (2006) · Molecular Cell · doi:10.1016/j.molcel.2006.04.023 · Cited by 288 · see citing works
Association of CBP/p300 Acetylase and Thymine DNA Glycosylase Links DNA Repair and Transcription
Tini, M., Benecke, A., Um, S.-J., Torchia, J., Evans, R. M., & Chambon, P. (2002) · Molecular Cell · doi:10.1016/s1097-2765(02)00453-7 · Cited by 285 · see citing works
Repair of Oxidative DNA Damage: Mechanisms and Functions
Lu, A.-L., Li, X., Gu, Y., Wright, P. M., & Chang, D. (2001) · Cell Biochemistry and Biophysics · doi:10.1385/cbb:35:2:141 · Cited by 272 · see citing works
Self-citationVenclovas, Č., & Thelen, M. P. (2000) · Nucleic Acids Research · doi:10.1093/nar/28.13.2481 · Cited by 268 · see citing works
Yeast Rad17/Mec3/Ddc1: A sliding clamp for the DNA damage checkpoint
Majka, J., & Burgers, P. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0437148100 · Cited by 255 · see citing works
Waters, T. R., Gallinari, P., Jiricny, J., & SWANN, P. F. (1999) · Journal of Biological Chemistry · doi:10.1074/jbc.274.1.67 · Cited by 253 · see citing works
Crystal structure of thymine DNA glycosylase conjugated to SUMO-1
Baba, D., Maita, N., Jee, J.-G., Uchimura, Y., Saitoh, H., Sugasawa, K., Hanaoka, F., Tochio, H., Hiroaki, H., & Shirakawa, M. (2005) · Nature · doi:10.1038/nature03634 · Cited by 232 · see citing works
Parker, A. R., Gu, Y., Mahoney, W., Lee, S., Singh, K. K., & Lu, A.-L. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m008463200 · Cited by 220 · see citing works
Self-citationA new class of uracil-DNA glycosylases related to human thymine-DNA glycosylase
Gallinari, P., & Jiricny, J. (1996) · Nature · doi:10.1038/383735a0 · Cited by 217 · see citing works
Structure of a trapped endonuclease III–DNA covalent intermediate
Fromme, J. C., & Verdine, G. L. (2003) · The EMBO Journal · doi:10.1093/emboj/cdg311 · Cited by 209 · see citing works
Gu, Y., Parker, A. R., Wilson, T., Bai, H., Chang, D., & Lu, A.-L. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m108618200 · Cited by 206 · see citing works
Self-citationThe mismatch repair system is required for S-phase checkpoint activation
Brown, K. D., Rathi, A., Kamath, R., Beardsley, D. I., Zhan, Q., Mannino, J. L., & Baskaran, R. (2003) · Nature Genetics · doi:10.1038/ng1052 · Cited by 206 · see citing works
The enigmatic thymine DNA glycosylase
Cortázar, D., Kunz, C., Saito, Y., Steinacher, R., & Schär, P. (2006) · DNA repair · doi:10.1016/j.dnarep.2006.10.013 · Cited by 199 · see citing works
Wang, Y., & Qin, J. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2536810100 · Cited by 181 · see citing works
Specificity of Human Thymine DNA Glycosylase Depends on N -Glycosidic Bond Stability
Bennett, M. T., Rodgers, M. T., Hebert, A. S., Ruslander, L. E., Eisele, L. E., & Drohat, A. C. (2006) · Journal of the American Chemical Society · doi:10.1021/ja0634829 · Cited by 172 · see citing works
Self-citationDNA REPAIR MECHANISMS FOR THE RECOGNITION AND REMOVAL OF DAMAGED DNA BASES
Mol, C. D., Parikh, S. S., Putnam, C. D., Lo, T. P., & Tainer, J. A. (1999) · Annual Review of Biophysics and Biomolecular Structure · doi:10.1146/annurev.biophys.28.1.101 · Cited by 167 · see citing works
DNA damage checkpoint in budding yeast
Longhese, M. P., Foiani, M., Muzi-Falconi, M., Lucchini, G., & Plevani, P. (1998) · The EMBO Journal · doi:10.1093/emboj/17.19.5525 · Cited by 162 · see citing works
Steinacher, R., & Schär, P. (2005) · Current Biology · doi:10.1016/j.cub.2005.02.054 · Cited by 161 · see citing works
Reeler: new tales on an old mutant mouse
D’Arcangelo, G., & Curran, T. (1998) · BioEssays · doi:10.1002/(sici)1521-1878(199803)20:3 · Cited by 156 · see citing works
Hardeland, U. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg344 · Cited by 149 · see citing works
MITRA, S. P., Izumi, T., Boldogh, I. R., Bhakat, K. K., Hill, J. W., & Hazra, T. K. (2002) · Free Radical Biology and Medicine · doi:10.1016/s0891-5849(02)00819-5 · Cited by 146 · see citing works
Kinetics of the Action of Thymine DNA Glycosylase
Waters, T. R., & SWANN, P. F. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.32.20007 · Cited by 144 · see citing works
Doublié, S., Bandaru, V., Bond, J. P., & Wallace, S. S. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0402051101 · Cited by 143 · see citing works
Burtelow, M. A., Roos‐Mattjus, P., Rauen, M. P., Babendure, J. R., & Karnitz, L. M. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m102946200 · Cited by 142 · see citing works
Shimizu, Y., Iwai, S., Hanaoka, F., & Sugasawa, K. (2002) · The EMBO Journal · doi:10.1093/emboj/cdg016 · Cited by 142 · see citing works
Progressive low‐grade oligodendrogliomas
Levin, N., Lavon, I., Zelikovitsh, B., et al. (2006) · Cancer · doi:10.1002/cncr.21809 · Cited by 134 · see citing works
Um, S., Harbers, M., Benecke, A., Pierrat, B., Losson, R., & Chambon, P. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.33.20728 · Cited by 134 · see citing works
Hardeland, U., Bentele, M., Jiricny, J., & Schär, P. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.m005095200 · Cited by 130 · see citing works
Inactivation of mouse Hus1 results in genomic instability and impaired responses to genotoxic stressPreprint
Weiss, R. S., Enoch, T., & Leder, P. (2000) · Genes & Development · doi:10.1101/gad.14.15.1886 · Cited by 130 · see citing works
Cortellino, S., Turner, D. P., Masciullo, V., Schepis, F., Albino, D., Daniel, R., Skalka, A. M., Meropol, N. J., Alberti, C., Larue, L., et al. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2334585100 · Cited by 127 · see citing works
Toueille, M. (2004) · Nucleic Acids Research · doi:10.1093/nar/gkh652 · Cited by 122 · see citing works
Chen, D., Lucey, M. J., Phoenix, F. A., Lopez-Garcia, J., Hart, S., Losson, R., Buluwela, L., Coombes, R. C., Chambon, P., Schär, P., et al. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.m304286200 · Cited by 116 · see citing works
Wu, X., Shell, S. M., & Zou, Y. (2005) · Oncogene · doi:10.1038/sj.onc.1208674 · Cited by 113 · cited 1× · see citing works
“RPA has been shown to directly interact with the 9-1-1 complex (80).”
BackgroundHopkins, K. M., Auerbach, W., Wang, X. Y., Hande, M. P., Hang, H., Wolgemuth, D. J., Joyner, A. L., & Lieberman, H. B. (2004) · Molecular and Cellular Biology · doi:10.1128/mcb.24.16.7235-7248.2004 · Cited by 113 · see citing works
Physical and functional interactions between nucleotide excision repair and DNA damage checkpoint
Giannattasio, M., Lazzaro, F., Longhese, M. P., Plevani, P., & Muzi‐Falconi, M. (2004) · The EMBO Journal · doi:10.1038/sj.emboj.7600051 · Cited by 113 · see citing works
Griffin, S., Branch, P., Xu, Y., et al. (1994) · Biochemistry · doi:10.1021/bi00182a006 · Cited by 109 · see citing works
The human Rad9–Rad1–Hus1 checkpoint complex stimulates flap endonuclease 1
Wang, W., Brandt, P., Rossi, M. L., Lindsey-Boltz, L., Podust, V., Fanning, E., Sancar, A., & Bambara, R. A. (2004) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0407686101 · Cited by 98 · see citing works
Sibghat-Ullah, Gallinari, P., Xu, Y., Goodman, M. F., Bloom, L. B., Jiricny, J., & Day, R. S. (1996) · Biochemistry · doi:10.1021/bi961022u · Cited by 96 · see citing works
Hardeland, U., Bentele, M., Lettieri, T., Steinacher, R., Jiricny, J., & Schär, P. (2001) · Progress in nucleic acid research and molecular biology · doi:10.1016/s0079-6603(01)68103-0 · Cited by 93 · see citing works
Shi, G., Chang, D., Cheng, C.-C., Guan, X., Venclovas, Č., & Lu, A.-L. (2006) · Biochemical Journal · doi:10.1042/bj20060774 · Cited by 91 · see citing works
Self-citationClamp and clamp loader structures of the human checkpoint protein complexes, Rad9‐1‐1 and Rad17‐RFC
Shiomi, Y., Shinozaki, A., Nakada, D., Sugimoto, K., Usukura, J., Obuse, C., & Tsurimoto, T. (2002) · Genes to Cells · doi:10.1046/j.1365-2443.2002.00566.x · Cited by 87 · see citing works
DNA Determinants and Substrate Specificities of Escherichia coli MutY
Lu, A.-L., Tsai-Wu, J.-J., & Cillo, J. (1995) · Journal of Biological Chemistry · doi:10.1074/jbc.270.40.23582 · Cited by 86 · see citing works
Self-citationChang, D.-Y., & Lu, A.-L. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.m406800200 · Cited by 85 · see citing works
Self-citationZhang, P., Mo, J. Y., Perez, A., Leon, A., Liu, L., Mazloum, N. A., Xu, H., & Lee, M. (1999) · Journal of Biological Chemistry · doi:10.1074/jbc.274.38.26647 · Cited by 85 · see citing works
Missero, C., Pirro, M. T., Simeone, S., Pischetola, M., & Lauro, R. D. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m104963200 · Cited by 80 · see citing works
Lavin, M. F. (2004) · DNA repair · doi:10.1016/j.dnarep.2004.07.001 · Cited by 78 · see citing works
Replication checkpoint: Preventing mitotic catastrophe
Canman, C. E. (2001) · Current Biology · doi:10.1016/s0960-9822(01)00057-4 · Cited by 78 · see citing works
Bhanot, O. S., & Ray, A. (1986) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.83.19.7348 · Cited by 76 · see citing works
Friedrich-Heineken, E., Toueille, M., Tännler, B., Bürki, C., Ferrari, E., Hottiger, M. O., & Hübscher, U. (2005) · Journal of Molecular Biology · doi:10.1016/j.jmb.2005.09.018 · Cited by 76 · see citing works
Gembka, A., Toueille, M., Smirnova, E., Poltz, R., Ferrari, E., Villani, G., & Hubscher, U. (2007) · Nucleic Acids Research · doi:10.1093/nar/gkl1139 · Cited by 74 · see citing works
The human checkpoint sensor Rad9–Rad1–Hus1 interacts with and stimulates NEIL1 glycosylase
Guan, X., Bai, H., Shi, G., Theriot, C. A., Hazra, T. K., Mitra, S., & Lu, A.-L. (2007) · Nucleic Acids Research · doi:10.1093/nar/gkm075 · Cited by 74 · see citing works
Self-citationSMIRNOVA, E., TOUEILLE, M., MARKKANEN, E., & HÜBSCHER, U. (2005) · Biochemical Journal · doi:10.1042/bj20050211 · Cited by 74 · cited 2× · see citing works
“Recently, the 9-1-1 complex has been shown to interact with and stimulate the enzymes involved in BER including MYH (35,36), NEIL1 (37), APE1 (38), Polb (39), FEN1 (40,41) and DNA ligase l ( 42 ,43).”
BackgroundCrystal Structure of SUMO-3-modified Thymine-DNA Glycosylase
Baba, D., Maita, N., Jee, J.-G., Uchimura, Y., Saitoh, H., Sugasawa, K., Hanaoka, F., Tochio, H., Hiroaki, H., & Shirakawa, M. (2006) · Journal of Molecular Biology · doi:10.1016/j.jmb.2006.03.036 · Cited by 65 · see citing works
Budzowska, M., Jaspers-Dekker, I., Essers, J., de Waard, H., van Drunen, E., Hanada, K., Beverloo, B., Hendriks, R. W., de Klein, A., Kanaar, R., et al. (2004) · The EMBO Journal · doi:10.1038/sj.emboj.7600353 · Cited by 61 · see citing works
Mechanism of Stimulation of Human DNA Ligase I by the Rad9-Rad1-Hus1 Checkpoint Complex
Wang, W., Lindsey-Boltz, L. A., Sancar, A., & Bambara, R. A. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m602289200 · Cited by 49 · see citing works
Postma, F. R., Jalink, K., Hengeveld, T., et al. (2001) · Current Biology · doi:10.1016/s0960-9822(01)00030-6 · Cited by 31 · see citing works
Griffin, S., & Karran, P. (1993) · Biochemistry · doi:10.1021/bi00211a012 · Cited by 30 · see citing works
Lari, S., Al-Khodairy, F. M., & Paterson, M. C. (2002) · Biochemistry · doi:10.1021/bi020239n · Cited by 12 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Yan, S., Sorrell, M., & Berman, Z. (2014) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-014-1666-4 · Cited by 247 · see citing works
Jin, S.-G., Zhang, Z.-M., Dunwell, T. L., Harter, M. R., Wu, X., Johnson, J., Li, Z., Liu, J., Szabó, P. E., Lu, Q., et al. (2016) · Cell Reports · doi:10.1016/j.celrep.2015.12.044 · Cited by 138 · see citing works
Checkpoint mechanisms at the intersection between DNA damage and repair
Lazzaro, F., Giannattasio, M., Puddu, F., Granata, M., Pellicioli, A., Plevani, P., & Muzi-Falconi, M. (2009) · DNA Repair · doi:10.1016/j.dnarep.2009.04.022 · Cited by 94 · see citing works
Navadgi-Patil, V. M., & Burgers, P. M. (2009) · DNA Repair · doi:10.1016/j.dnarep.2009.03.011 · Cited by 93 · see citing works
- Authors
- Guan, X., Madabushi, A., Chang, D.-Y., Fitzgerald, M. E., Shi, G., Drohat, A. C., & Lu, A.-L.
- Affiliations
- University of Maryland, Baltimore (US)
- Corresponding author
- Lu, A-Lien
- Venue
- Nucleic Acids Research
- Publisher
- Oxford University Press (OUP)
- Published
- 2007-09
- Volume
- 35
- Issue
- 18
- Pages
- 6207-6218
- ISSN
- 0305-1048 (ISSN-L)
- 1362-4962
- PMC
- PMC2094074
- OpenAlex
- W1982176904
- Cited by
- 65
- References
- 87
- Citations by year
- 2026: 1 · 2024: 1 · 2022: 1 · 2021: 1 · 2018: 3 · 2017: 1 · 2016: 3 · 2015: 8 · 2014: 2 · 2013: 12 · 2012: 3
- FWCI
- 2.91
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- Nucleic Acids Research (publishedVersion)
- PubMed Central (publishedVersion, cc-by-nc)
- PubMed (publishedVersion)
- Funders
- Universität Basel
- National Institutes of Health
- University of North Carolina at Chapel Hill
- University of California, Irvine
- National Cancer Institute (CA78391, R01CA078391, R56CA078391)
- National Institute of General Medical Sciences (GM-072711, T32GM066706, R01GM072711, GM066706)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA and Nucleic Acid Chemistry
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Epigenetics and DNA Methylation
- Keywords
- thymine DNA glycosylase, base excision repair, DNA glycosylase activity, protein-protein interaction, DNA mismatch repair, MNNG, methylating agents, genome stability, DNA damage recognition, cytosine deamination, 5-methylcytosine
- MeSH terms
- Amino Acid Sequence, Binding Sites, DNA Damage, DNA Repair, Enzyme Activation, Exonucleases, HeLa Cells, Humans, Molecular Sequence Data, Cell Cycle Proteins, Thymine DNA Glycosylase
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review