Cited by 1,834

The DOI matches its Crossref record; 6 of the 6 references it cites were found in a registry or an index.

RNA editing with CRISPR-Cas13

Cox, David B. T., Gootenberg, Jonathan S., Abudayyeh, Omar O., Franklin, Brian, Kellner, Max J., Joung, Julia, Zhang, Feng·2017·Science

Abstract

Precise transcriptome engineering: Efficient and precise RNA editing to correct disease-relevant transcripts holds great promise for treating genetic disease. Cox et al. took advantage of the ability of Cas13b, an effector from a type VI CRISPR-Cas system, to target specific RNAs directly (see the Perspective by Yang and Chen). They fused Cas13b with the ADAR2 adenosine deaminase domain and used rational protein engineering to improve the resultant enzyme. These approaches yielded an RNA knockdown and editing platform that allowed efficient and specific RNA depletion and correction in mammalian cells. Science , this issue p. 1019 ; see also p. 996

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1126/science.aaq0180

Cites

6 of 6 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • CRISPR/Cas13a systems can cleave RNA molecules and emerge as an answer to RNA viruses, although ongoing research focuses on identifying most potent and specific Cas13 variants.

    “CRISPR/Cas13a systems also emerge as an answer to RNA viruses do their capacity to cleave RNA molecules, although due to its novelty ongoing research still focuses on identifying the most potent and specific Cas13 variants [173,174].”

    From CRISPR-Cas: Converting A Bacterial Defence Mechanism into A State-of-the-Art Genetic Manipulation Tool (2019) · cites this paper as [173]

    The Introduction (page unavailable) says Cas13 enzymes cleave RNA and describes testing Cas13 variants to identify one with efficient, specific RNA knockdown. The Comprehensive Characterization section (page unavailable) includes Cas13a among the variants tested. Our copy does not present Cas13a as an answer to RNA viruses; its reported applications concern RNA knockdown and editing in mammalian cells. (LLM, conf=0.88)

    Experimental — accuracy not yet measured

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 32

  1. 10.1016/j.cell.2014.05.010 · DOI · Paper page
  2. 10.1016/j.cell.2016.10.044 · DOI
  3. 10.1016/j.cell.2015.09.038 · DOI · Paper page
  4. 10.1038/nrg3686 · DOI
  5. 10.1038/nbt.3803 · DOI · Paper page
  6. 10.1126/science.aaf5573 · DOI · Paper page
  7. 10.1016/j.molcel.2015.10.008 · DOI · Paper page
  8. 10.1038/nrmicro.2016.184 · DOI · Paper page
  9. 10.1016/j.molcel.2016.12.023 · DOI · Paper page
  10. 10.1126/science.aam9321 · DOI
  11. 10.1146/annurev-biochem-060208-105251 · DOI · Paper page
  12. 10.1038/nature24041 · DOI
  13. 10.1016/0092-8674(88)90253-X · DOI
  14. 10.1038/nsmb.3203 · DOI
  15. Y. Zheng, C. Lorenzo, P. A. Beal, DNA editing in DNA/RNA hybrids by adenosine deaminases that act on RNA. Nucleic Acids Res. 45, 3369–3377 (2017). 28132026
  16. 10.1073/pnas.1212548109 · DOI
  17. 10.1017/S135583820101007X · DOI
  18. 10.1038/srep41478 · DOI
  19. 10.1073/pnas.1306243110 · DOI
  20. M. F. Montiel-González, I. C. Vallecillo-Viejo, J. J. Rosenthal, An efficient system for selectively altering genetic information within mRNAs. Nucleic Acids Res. 44, e157 (2016). 27557710
  21. J. Wettengel, P. Reautschnig, S. Geisler, P. J. Kahle, T. Stafforst, Harnessing human ADAR2 for RNA repair - Recoding a PINK1 mutation rescues mitophagy. Nucleic Acids Res. 45, 2797–2808 (2017). 27907896
  22. 10.1021/acschembio.5b00711 · DOI
  23. 10.1021/bi001383g · DOI
  24. 10.1002/anie.201206489 · DOI
  25. 10.1038/jid.2010.214 · DOI
  26. 10.1038/ng.644 · DOI
  27. 10.1038/nprot.2017.016 · DOI · Paper page
  28. 10.1186/1471-2105-12-323 · DOI · Paper page
  29. 10.1002/0471250953.bi1212s49 · DOI
  30. 10.1093/bioinformatics/btt287 · DOI
  31. 10.1093/bioinformatics/btr540 · DOI
  32. J. D. Watson Molecular Biology of the Gene (Pearson Boston ed. 7 2014).

Cited by

Sorted by citations

Metadata

Authors
Cox, D. B. T., Gootenberg, J. S., Abudayyeh, O. O., Franklin, B., Kellner, M. J., Joung, J., & Zhang, F.
Affiliations
Broad Institute of Massachusetts Institute of Technology (MIT) and Harvard, Cambridge, MA 02142, USA.
Venue
Science
Published
2017-11-24
Volume
358
Issue
6366
Pages
1019-1027
ISSN
  • 0036-8075
  • 1095-9203
Cited by
1,834
References
6
Language
en
Funders
  • National Institutes of Health (award352307, 1R01-HG009761, award352308, 1R01-MH110049, award352309, 1DP1-HL141201, award352311, T32GM007753, award352317, 1F30-CA210382)
  • Paul and Daisy Soros Fellowships for New Americans (award352310)
  • Howard Hughes Medical Institute (award352313)
  • Simons Foundation (award352312)
  • Paul G. Allen Family Foundation (award352315)
  • New York Stem Cell Foundation (award352314)
  • Vallee Foundation (award352316)

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review