Evolution of Circulating Wild Poliovirus and of Vaccine-Derived Poliovirus in an Immunodeficient Patient: a Unifying Model

Gavrilin, Gene V.; Cherkasova, Elena A.; Lipskaya, Galina Y.; Kew, Olen M.; Agol, Vadim I.

doi:10.1128/jvi.74.16.7381-7390.2000

Cited by 138Evolution and Genetic DynamicsViral Infections and Immunology ResearchRNA and protein synthesis mechanisms

Evolution of Circulating Wild Poliovirus and of Vaccine-Derived Poliovirus in an Immunodeficient Patient: a Unifying Model

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Gavrilin, Gene V., Cherkasova, Elena A., Lipskaya, Galina Y., Kew, Olen M., Agol, Vadim I.·2000·Journal of Virology

DOI 10.1128/jvi.74.16.7381-7390.2000PMC PMC112258

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Abstract

We determined nucleotide sequences of the VP1 and 2AB genes and portions of the 2C and 3D genes of two evolving poliovirus lineages: circulating wild viruses of T geotype and Sabin vaccine-derived isolates from an immunodeficient patient. Different regions of the viral RNA were found to evolve nonsynchronously, and the rate of evolution of the 2AB region in the vaccine-derived population was not constant throughout its history. Synonymous replacements occurred not completely randomly, suggesting the need for conservation of certain rare codons (possibly to control translation elongation) and the existence of unidentified constraints in the viral RNA structure. Nevertheless the major contribution to the evolution of the two lineages came from linear accumulation of synonymous substitutions. Therefore, in agreement with current theories of viral evolution, we suggest that the majority of the mutations in both lineages were fixed as a result of successive sampling, from the heterogeneous populations, of random portions containing predominantly neutral and possibly adverse mutations. As a result of such a mode of evolution, the virus fitness may be maintained at a more or less constant level or may decrease unless more-fit variants are stochastically generated. The proposed unifying model of natural poliovirus evolution has important implications for the epidemiology of poliomyelitis.

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They also appear to be largely independent of immune selection, as evolution rates are similar during prolonged replication in immunodeficient patients and during widespread circulation.
“They also appear to be largely independent of immune selection, as evolution rates are similar during prolonged replication in immunodeficient patients (10, 88, 117, 223) and during widespread circulation (60, 84, 85, 108).”
From VACCINE-DERIVED POLIOVIRUSES AND THE ENDGAME STRATEGY FOR GLOBAL POLIO ERADICATION (2005) · cites this paper as [60]

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Authors: Gavrilin, G. V., Cherkasova, E. A., Lipskaya, G. Y., Kew, O. M., & Agol, V. I.
Affiliations: Lomonosov Moscow State University (RU)
Centers for Disease Control and Prevention (US)
ORCID: Cherkasova, Elena A.
Agol, Vadim I.
Venue: Journal of Virology
Publisher: American Society for Microbiology
Published: 2000-08-15
Volume: 74
Issue: 16
Pages: 7381-7390
ISSN: 0022-538X (ISSN-L)
1098-5514
DOI: 10.1128/jvi.74.16.7381-7390.2000
PMC: PMC112258
OpenAlex: W2068593953
Cited by: 138
References: 77
Citations by year: 2025: 1 · 2024: 1 · 2023: 3 · 2021: 1 · 2020: 2 · 2019: 6 · 2018: 4 · 2017: 3 · 2016: 3 · 2015: 6 · 2014: 11 · 2013: 7 · 2012: 14
FWCI: 2.33
Type: journal article
Language: en
Open access: green
europepmc.org
Licence: journals.asm.org/non-commercial-tdm-license (tdm)
Locations: Journal of Virology (publishedVersion)
Europe PMC (PubMed Central) (publishedVersion)
PubMed Central (publishedVersion)
PubMed (publishedVersion)
Funders: Russian Foundation for Basic Research
Topics: Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
Health Sciences › Medicine › Cardiology and Cardiovascular Medicine › Viral Infections and Immunology Research
Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
Keywords: poliovirus evolution, vaccine-derived poliovirus, VP1 gene, 3D gene, synonymous substitutions, viral fitness, poliomyelitis epidemiology, oral polio vaccine
MeSH terms: Adolescent, Amino Acid Sequence, Capsid, Child, Codon, Cysteine Endopeptidases, Humans, Molecular Sequence Data, Mutation, Nucleic Acid Conformation, Poliomyelitis, Poliovirus Vaccine, Oral, Time Factors, Viral Proteins, Genome, Viral, Immunocompromised Host, Viral Nonstructural Proteins, Sequence Analysis, DNA, Poliovirus, Evolution, Molecular, Capsid Proteins

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Evolution of Circulating Wild Poliovirus and of Vaccine-Derived Poliovirus in an Immunodeficient Patient: a Unifying Model

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