Severe CD4+T-Cell Depletion in Gut Lymphoid Tissue during Primary Human Immunodeficiency Virus Type 1 Infection and Substantial Delay in Restoration following Highly Active Antiretroviral Therapy
Open accessAbstract
Gut-associated lymphoid tissue (GALT) harbors the majority of T lymphocytes in the body and is an important target for human immunodeficiency virus type 1 (HIV-1). We analyzed longitudinal jejunal biopsy samples from HIV-1-infected patients, during both primary and chronic stages of HIV-1 infection, prior to and following the initiation of highly active antiretroviral therapy (HAART) to determine the onset of CD4+T-cell depletion and the effect of HAART on the restoration of CD4+T cells in GALT. Severe depletion of intestinal CD4+T cells occurred during primary HIV-1 infection. Our results showed that the restoration of intestinal CD4+T cells following HAART in chronically HIV-1-infected patients was substantially delayed and incomplete. In contrast, initiation of HAART during early stages of infection resulted in near-complete restoration of intestinal CD4+T cells, despite the delay in comparison to peripheral blood CD4+T-cell recovery. DNA microarray analysis of gene expression profiles and flow-cytometric analysis of lymphocyte homing and cell proliferation markers demonstrated that cell trafficking to GALT and not local proliferation contributed to CD4+T-cell restoration. Evaluation of jejunal biopsy samples from long-term HIV-1-infected nonprogressors showed maintenance of normal CD4+T-cell levels in both GALT and peripheral blood. Our results demonstrate that near-complete restoration of mucosal immune system can be achieved by initiating HAART early in HIV-1 infection. Monitoring of the restoration and/or maintenance of CD4+T cells in GALT provides a more accurate assessment of the efficacy of antiviral host immune responses as well as HAART.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Organ-specific non-peripheral cells with tissue-homing markers can transiently appear in blood cell preparations.
“In these blood cell preparations, organ-specific non-peripheral cells with tissue-homing markers can also transiently appear. 16-20”
From Revealing viral and cellular dynamics of HIV-1 at the single-cell level during early treatment periods (2023) · cites this paper as [18]
The Results report that peripheral blood CD4+ T cells expressed integrin β7, a marker involved in homing to the intestinal mucosa. They do not establish that these cells originated in an organ or appeared only transiently in blood cell preparations; the proposed trafficking direction is from the periphery to the gut. Page numbers are unavailable in our copy. (LLM, conf=0.84)
Experimental — accuracy not yet measuredIt is known that especially integrin a4b7-expressing cells are predominantly infected and depleted during the early infection phases, with a rather poor recovery during ART.
“It is known that especially integrin a 4 b 7 -expressing cells are predominantly infected and depleted during the early infection phases, with a rather poor recovery during ART. 18,20”
From Revealing viral and cellular dynamics of HIV-1 at the single-cell level during early treatment periods (2023) · cites this paper as [18]
The Results (page not specified) show severe intestinal CD4+ T-cell depletion during primary HIV-1 infection and delayed, incomplete recovery with HAART begun during chronic infection. They measure integrin β7 expression during HAART, but do not show that α4β7-expressing cells are preferentially infected or depleted, or that this specific subset recovers poorly. The Results also report near-complete intestinal CD4+ T-cell restoration when HAART began during primary infection. (LLM, conf=0.88)
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Vigorous HIV-1-Specific CD4 + T Cell Responses Associated with Control of Viremia
Rosenberg, E. S., Billingsley, J. M., Caliendo, A. M., Boswell, S. L., Sax, P. E., Kalams, S. A., & Walker, B. D. (1997) · Science · doi:10.1126/science.278.5342.1447 · Cited by 1,832 · see citing works
Autran, B., Carcelain, G., Li, T., Blanc, C., Mathez, D., Tubiana, R., Katlama, C., Debré, P., & Leibowitch, J. (1997) · Science · doi:10.1126/science.277.5322.112 · Cited by 1,786 · see citing works
Veazey, R. S., DeMaria, M. A., Chalifoux, L. V., Shvetz, D. E., Pauley, D. R., Knight, H., Rosenzweig, M., Johnson, R. P., Desrosiers, R. C., & Lackner, A. A. (1998) · Science · doi:10.1126/science.280.5362.427 · Cited by 1,404 · see citing works
Immune control of HIV-1 after early treatment of acute infection
Rosenberg, E. S., Altfeld, M. A., Poon, S. H. T., Phillips, M. N., Wilkes, B. M., Eldridge, R. L., Robbins, G. K., D’Aquila, R. T., Goulder, P., & Walker, B. D. (2000) · Nature · doi:10.1038/35035103 · Cited by 1,002 · see citing works
Programmed Death of T Cells in HIV-1 Infection
Meyaard, L., Otto, S. A., Jonker, R. R., Mijnster, M. J., Keet, R., & Miedema, F. F. (1992) · Science · doi:10.1126/science.1352911 · Cited by 898 · see citing works
Haase, A. T. (1999) · Annual Review of Immunology · doi:10.1146/annurev.immunol.17.1.625 · Cited by 541 · see citing works
Cell dysfunction and depletion in AIDS: the programmed cell death hypothesis
Ameisen, J. C., & Capron, A. (1991) · Immunology Today · doi:10.1016/0167-5699(91)90092-8 · Cited by 536 · see citing works
Zhao, H., Watkins, J. L., & Piwnica-Worms, H. M. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.182557299 · Cited by 459 · see citing works
Lederman, M. M., Connick, E., LANDAY, A. L., Kuritzkes, D. R., Spritzler, J., Clair, M. S., Kotzin, B. L., Fox, L. L., Heath-Chiozzi, M. E., Leonard, J. M., et al. (1998) · The Journal of Infectious Diseases · doi:10.1086/515591 · Cited by 425 · see citing works
Overview of the Mucosal Immune System
Brandtzaeg, P. (1989) · Current topics in microbiology and immunology · doi:10.1007/978-3-642-74529-4_2 · Cited by 274 · see citing works
Smit-McBride, Z., Mattapallil, J. J., McChesney, M., Ferrick, D., & Dandekar, S. (1998) · Journal of Virology · doi:10.1128/jvi.72.8.6646-6656.1998 · Cited by 204 · see citing works
Self-citationSchneider, T., Jahn, H., Schmidt, W., Riecken, E. O., Zeitz, M., & Ullrich, R. (1995) · Gut · doi:10.1136/gut.37.4.524 · Cited by 203 · see citing works
Heise, C. C., Miller, C. J., Lackner, A. A., & Dandekar, S. (1994) · The Journal of Infectious Diseases · doi:10.1093/infdis/169.5.1116 · Cited by 146 · see citing works
Self-citationEarly reduction of immune activation in lymphoid tissue following highly active HIV therapy
Andersson, J., Fehniger, T. E., Patterson, B. K., Pottage, J. C., Agnoli, M. M., Jones, P., Behbahani, H., & LANDAY, A. L. (1998) · AIDS · doi:10.1097/00002030-199811000-00004 · Cited by 145 · see citing works
Kotler, D. P., Reka, S., Borcich, A., & Cronin, W. J. (1991) · PubMed Central · Cited by 107 · see citing works
Mattapallil, J. J., Smit‐McBride, Z., McChesney, M. B., & Dandekar, S. (1998) · Journal of Virology · doi:10.1128/jvi.72.8.6421-6429.1998 · Cited by 102 · see citing works
Self-citationMeng, G., Sellers, M. T., Mosteller‐Barnum, M., Rogers, T. S., Shaw, G. M., & Smith, P. D. (2000) · The Journal of Infectious Diseases · doi:10.1086/315790 · Cited by 83 · see citing works
Characterization of HIV-1-specific T-helper cells in acute and chronic infection
Rosenberg, E. S. (1999) · Immunology Letters · doi:10.1016/s0165-2478(98)00165-5 · Cited by 72 · see citing works
Stone, J. D., Heise, C. C., Miller, C. J., Halsted, C. H., & Dandekar, S. (1994) · AIDS · doi:10.1097/00002030-199409000-00005 · Cited by 66 · see citing works
Self-citationCytokine gene expression in HIV-infected intestinal mucosa
McGowan, I., Radford‐Smith, G. L., & Jewell, D. P. (1994) · AIDS · doi:10.1097/00002030-199411000-00008 · Cited by 61 · see citing works
Noble, A., Pestano, G. A., & Cantor, H. (1998) · The Journal of Immunology · doi:10.4049/jimmunol.160.2.559 · Cited by 59 · see citing works
HIV1 and the gut in the era of highly active antiretroviral therapy
Nannini, E. C., & Okhuysen, P. C. (2002) · Current Gastroenterology Reports · doi:10.1007/s11894-002-0009-z · Cited by 47 · see citing works
Mattapallil, J. J., Smit‐McBride, Z., Dailey, P. J., & Dandekar, S. (1999) · Journal of Virology · doi:10.1128/jvi.73.8.6661-6669.1999 · Cited by 32 · see citing works
Self-citationSmit‐McBride, Z., Mattapallil, J. J., Villinger, F. J., Ansari, A. A., & Dandekar, S. (1998) · Journal of Medical Primatology · doi:10.1111/j.1600-0684.1998.tb00237.x · Cited by 13 · see citing works
Self-citation
Flagged first, then by citations
Research works printed but not linked: 1
- [19]Schneider, T., H. U. Jahn, W. Schmidt, E. O. Riecken, M. Zeitz, R. Ullrich, et al. 1995. Loss of CD4 T lymphocytes in patients infected with human immunodeficiency virus type 1 is more pronounced in the duodenal mucosa than in the peripheral blood. Gut 37:524-529. [DOI] [PMC free article] [PubMed] [Google Scholar]
Cited by
Sorted by citations
Microbial translocation is a cause of systemic immune activation in chronic HIV infection
Brenchley, J. M., Price, D. A., Schacker, T. W., Asher, T. E., Silvestri, G., Rao, S., Kazzaz, Z., Bornstein, E., Lambotte, O., Altmann, D., et al. (2006) · Nature Medicine · doi:10.1038/nm1511 · Cited by 3,559 · see citing works
Brenchley, J. M., Schacker, T. W., Ruff, L. E., Price, D. A., Taylor, J. H., Beilman, G. J., Nguyen, P. L., Khoruts, A., Larson, M. C., Haase, A. T., et al. (2004) · The Journal of Experimental Medicine · doi:10.1084/jem.20040874 · Cited by 1,836 · see citing works
Mehandru, S., Poles, M. A., Tenner‐Racz, K., Horowitz, A., Hurley, A., Hogan, C., Boden, D., Rácz, P., & Markowitz, M. H. (2004) · The Journal of Experimental Medicine · doi:10.1084/jem.20041196 · Cited by 1,133 · see citing works
Peak SIV replication in resting memory CD4+ T cells depletes gut lamina propria CD4+ T cells
Li, Q., Duan, L., Estes, J. D., Ma, Z.-M., Rourke, T., Wang, Y., Reilly, C., Carlis, J. V., Miller, C. J., & Haase, A. T. (2005) · Nature · doi:10.1038/nature03513 · Cited by 942 · see citing works
Deeks, S. G., & Walker, B. D. (2007) · Immunity · doi:10.1016/j.immuni.2007.08.010 · Cited by 756 · see citing works
Holt, N., Wang, J., Kim, K., Friedman, G., Wang, X., Taupin, V., Crooks, G. M., Kohn, D. B., Gregory, P. D., Holmes, M. C., et al. (2010) · Nature Biotechnology · doi:10.1038/nbt.1663 · Cited by 677 · see citing works
Fletcher, C. V., Staskus, K. A., Wietgrefe, S. W., Rothenberger, M. K., Reilly, C., Chipman, J. G., Beilman, G. J., Khoruts, A., Thorkelson, A., Schmidt, T. E., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1318249111 · Cited by 666 · see citing works
Differential Th17 CD4 T-cell depletion in pathogenic and nonpathogenic lentiviral infections
Brenchley, J. M., Paiardini, M., Knox, K. S., Asher, A. I., Cervasi, B., Asher, T. E., Scheinberg, P., Price, D. A., Hage, C. A., Kholi, L. M., et al. (2008) · Blood · doi:10.1182/blood-2008-05-159301 · Cited by 647 · see citing works
Goonetilleke, N. P., Liu, M. K. P., Salazar-Gonzalez, J. F., Ferrari, G., Giorgi, E. E., Ganusov, V. V., Keele, B. F., Learn, G. H., Turnbull, E. L., Salazar, M. G., et al. (2009) · The Journal of Experimental Medicine · doi:10.1084/jem.20090365 · Cited by 641 · see citing works
Hunt, P. W., Brenchley, J. M., Sinclair, E., McCune, J. M., Roland, M. E., Page, K. A., Hsue, P. Y., Emu, B., Krone, M., Lampiris, H. W., et al. (2007) · The Journal of Infectious Diseases · doi:10.1086/524143 · Cited by 634 · see citing works
Perreau, M., Savoye, A.-L., Crignis, E. D., Corpataux, J.-M., Cubas, R. A., Haddad, E. K., de Leval, L., Graziosi, C., & Pantaleo, G. (2012) · The Journal of Experimental Medicine · doi:10.1084/jem.20121932 · Cited by 632 · see citing works
Emerging Concepts in the Immunopathogenesis of AIDS
Douek, D. C., Roederer, M., & Koup, R. A. (2008) · Annual Review of Medicine · doi:10.1146/annurev.med.60.041807.123549 · Cited by 612 · see citing works
Targeting early infection to prevent HIV-1 mucosal transmission
Haase, A. T. (2010) · Nature · doi:10.1038/nature08757 · Cited by 591 · see citing works
Insights into host responses against pathogens from transcriptional profiling
Jenner, R. G., & Young, R. A. (2005) · Nature Reviews Microbiology · doi:10.1038/nrmicro1126 · Cited by 588 · see citing works
Arthos, J. A., Cicala, C., Martinelli, E., Macleod, K., Ryk, D. V., Wei, D., Xiao, Z., Veenstra, T. D., Conrad, T., Lempicki, R. A., et al. (2008) · Nature Immunology · doi:10.1038/ni1566 · Cited by 576 · see citing works
HIV disease: fallout from a mucosal catastrophe?
Brenchley, J. M., Price, D. A., & Douek, D. C. (2006) · Nature Immunology · doi:10.1038/ni1316 · Cited by 579 · see citing works
Persistence of HIV in Gut‐Associated Lymphoid Tissue despite Long‐Term Antiretroviral Therapy
Chun, T., Nickle, D. C., Justement, J. S., Meyers, J. H., Roby, G. A., Hallahan, C. W., Kottilil, S., Moir, S. L., Mican, J. M., Mullins, J. I., et al. (2008) · The Journal of Infectious Diseases · doi:10.1086/527324 · Cited by 569 · see citing works
CD 4 + T‐cell depletion in HIV infection: mechanisms of immunological failure
Okoye, A. A., & Picker, L. J. (2013) · Immunological Reviews · doi:10.1111/imr.12066 · Cited by 571 · see citing works
Comparative Analysis of Measures of Viral Reservoirs in HIV-1 Eradication Studies
Eriksson, S., Graf, E. H., Dahl, V., Strain, M. C., Yukl, S. A., Lysenko, E. S., Bosch, R. J., Lai, J., Chioma, S., Emad, F., et al. (2013) · PLoS Pathogens · doi:10.1371/journal.ppat.1003174 · Cited by 561 · see citing works
Effros, R. B., Fletcher, C. V., Gebo, K., Halter, J. B., Hazzard, W. R., Horne, F. M., Huebner, R. E., Janoff, E. N., Justice, A. C., Kuritzkes, D., et al. (2008) · Clinical Infectious Diseases · doi:10.1086/590150 · Cited by 539 · see citing works
HIV infection and the gastrointestinal immune system
Brenchley, J. M., & Douek, D. C. (2007) · Mucosal Immunology · doi:10.1038/mi.2007.1 · Cited by 525 · see citing works
Pathogenesis of HIV infection: what the virus spares is as important as what it destroys
Grossman, Z., Meier‐Schellersheim, M., Paul, W. E., & Picker, L. J. (2006) · Nature Medicine · doi:10.1038/nm1380 · Cited by 501 · see citing works
Microbial Translocation in the Pathogenesis of HIV Infection and AIDS
Marchetti, G. C., Tincati, C., & Silvestri, G. (2013) · Clinical Microbiology Reviews · doi:10.1128/cmr.00050-12 · Cited by 502 · see citing works
Microbial Translocation Across the GI Tract
Brenchley, J. M., & Douek, D. C. (2012) · Annual Review of Immunology · doi:10.1146/annurev-immunol-020711-075001 · Cited by 496 · see citing works
Redefining the Viral Reservoirs that Prevent HIV-1 Eradication
Eisele, E., & Siliciano, R. F. (2012) · Immunity · doi:10.1016/j.immuni.2012.08.010 · Cited by 474 · see citing works
Microbial translocation in HIV infection: causes, consequences and treatment opportunities
Utay, N. S., & Douek, D. C. (2012) · Nature Reviews Microbiology · doi:10.1038/nrmicro2848 · Cited by 473 · see citing works
Pathogenic Mechanisms of HIV Disease
Moir, S. L., Chun, T., & Fauci, A. S. (2011) · Annual Review of Pathology Mechanisms of Disease · doi:10.1146/annurev-pathol-011110-130254 · Cited by 468 · see citing works
Perils at mucosal front lines for HIV and SIV and their hosts
Haase, A. T. (2005) · Nature reviews. Immunology · doi:10.1038/nri1706 · Cited by 436 · see citing works
Immune activation and HIV persistence: implications for curative approaches to HIV infection
Klatt, N. R., Chomont, N., Douek, D. C., & Deeks, S. G. (2013) · Immunological Reviews · doi:10.1111/imr.12065 · Cited by 439 · see citing works
The Macaque Gut Microbiome in Health, Lentiviral Infection, and Chronic Enterocolitis
McKenna, P. M., Hoffmann, C., Minkah, N. K., Aye, P. P., Lackner, A. A., Liu, Z. Z., Lozupone, C., Hamady, M., Knight, R. D., & Bushman, F. D. (2008) · PLoS Pathogens · doi:10.1371/journal.ppat.0040020 · Cited by 438 · see citing works
HIV and Inflammation: Mechanisms and Consequences
Hunt, P. W. (2012) · Current HIV/AIDS Reports · doi:10.1007/s11904-012-0118-8 · Cited by 431 · see citing works
Intestinal macrophages and response to microbial encroachment
Smith, P. D., Smythies, L. E., Shen, R., Greenwell‐Wild, T., Gliozzi, M., & Wahl, S. M. (2010) · Mucosal Immunology · doi:10.1038/mi.2010.66 · Cited by 385 · see citing works
Leeansyah, E., Ganesh, A., Quigley, M. F., Sönnerborg, A. B., Andersson, J., Hunt, P. W., Somsouk, M., Deeks, S. G., Martin, J. N., Moll, M., et al. (2012) · Blood · doi:10.1182/blood-2012-07-445429 · Cited by 372 · see citing works
HIV TransmissionPreprint
Shaw, G. M., & Hunter, E. (2012) · Cold Spring Harbor Perspectives in Medicine · doi:10.1101/cshperspect.a006965 · Cited by 328 · see citing works
Early Events in Sexual Transmission of HIV and SIV and Opportunities for Interventions
Haase, A. T. (2010) · Annual Review of Medicine · doi:10.1146/annurev-med-080709-124959 · Cited by 322 · see citing works
The role of secretory antibodies in infection immunity
Strugnell, R. A., & Wijburg, O. L. C. (2010) · Nature Reviews Microbiology · doi:10.1038/nrmicro2384 · Cited by 320 · see citing works
Antiretroviral Pre-exposure Prophylaxis Prevents Vaginal Transmission of HIV-1 in Humanized BLT Mice
Denton, P. W., Estes, J. D., Sun, Z., Othieno, F. A., Wei, B. L., Wege, A. K., Powell, D. A., Payne, D. A., Haase, A. T., & García, J. V. (2008) · PLoS Medicine · doi:10.1371/journal.pmed.0050016 · Cited by 319 · see citing works
Early and nonreversible decrease of CD161++/MAIT cells in HIV infection
Cosgrove, C., Ussher, J. E., Rauch, A., Gärtner, K., Kurioka, A., Hühn, M. H., Adelmann, K., Kang, Y.-H., Fergusson, J. R., Peter Simmonds, K., et al. (2012) · Blood · doi:10.1182/blood-2012-06-436436 · Cited by 310 · see citing works
Gut microbiota diversity predicts immune status in HIV-1 infection
Nowak, P., Trøseid, M., Avershina, E., Barqasho, B., Neogi, U., Holm, K., Hov, J. R., Noyan, K., Vesterbacka, J., Svärd, J., et al. (2015) · AIDS · doi:10.1097/qad.0000000000000869 · Cited by 298 · see citing works
Picker, L. J., Hagen, S. I., Lum, R., Reed-Inderbitzin, E. F., Daly, L. M., Sylwester, A. W., Walker, J. M., Siess, D. C., Piatak, M., Wang, C., et al. (2004) · The Journal of Experimental Medicine · doi:10.1084/jem.20041049 · Cited by 300 · see citing works
Understanding HIV-1 latency provides clues for the eradication of long-term reservoirs
Coiras, M., López‐Huertas, M. R., Pérez‐Olmeda, M., & Alcamı́, J. (2009) · Nature Reviews Microbiology · doi:10.1038/nrmicro2223 · Cited by 281 · see citing works
Lack of Mucosal Immune Reconstitution during Prolonged Treatment of Acute and Early HIV-1 Infection
Mehandru, S., Poles, M. A., Tenner‐Racz, K., Jean-Pierre, P., Manuelli, V., Lopez, P., Shet, A., Low, A., Mohri, H., Boden, D., et al. (2006) · PLoS Medicine · doi:10.1371/journal.pmed.0030484 · Cited by 287 · see citing works
Gordon, S. N., Klatt, N. R., Bosinger, S. E., Brenchley, J. M., Milush, J. M., Engram, J. C., Dunham, R. M., Paiardini, M., Klucking, S., Danesh, A., et al. (2007) · The Journal of Immunology · doi:10.4049/jimmunol.179.5.3026 · Cited by 286 · see citing works
Human Immunodeficiency Virus-Related Microbial Translocation and Progression of Hepatitis C
Balagopal, A., Philp, F. H., Astemborski, J. A., Block, T. M., Mehta, A. S., Long, R. E., Kirk, G. D., Mehta, S. H., Cox, A. L., Thomas, D. L., et al. (2008) · Gastroenterology · doi:10.1053/j.gastro.2008.03.022 · Cited by 282 · see citing works
So‐Armah, K., McGinnis, K. A., Baker, J. V., Gibert, C. L., Butt, A. A., Bryant, K. J., Goetz, M. B., Tracy, R. P., Oursler, K. K., Rimland, D., et al. (2012) · Clinical Infectious Diseases · doi:10.1093/cid/cis406 · Cited by 264 · see citing works
Schuetz, A., Deléage, C., Sereti, I., Rerknimitr, R., Phanuphak, N., Phuang‐Ngern, Y., Estes, J. D., Utay, N. S., Sukhumvittaya, S., Marovich, M., et al. (2014) · PLoS Pathogens · doi:10.1371/journal.ppat.1004543 · Cited by 263 · see citing works
The Effects of Circumcision on the Penis Microbiome
Price, L. B., Liu, C. M., Johnson, K. E., Aziz, M., Lau, M. K., Bowers, J. R., Ravel, J., Keim, P., Serwadda, D. M., Wawer, M. J., et al. (2010) · PLoS ONE · doi:10.1371/journal.pone.0008422 · Cited by 258 · see citing works
Guadalupe, M., Sankaran, S., George, M. D., Reay, E., Verhoeven, D. E., Shacklett, B. L., Flamm, J., Wegelin, J. A., Prindiville, T. P., & Dandekar, S. (2006) · Journal of Virology · doi:10.1128/jvi.00120-06 · Cited by 248 · see citing works
Self-citationTh17 Cytokines and the Gut Mucosal Barrier
Blaschitz, C., & Raffatellu, M. (2010) · Journal of Clinical Immunology · doi:10.1007/s10875-010-9368-7 · Cited by 247 · see citing works
Gazzola, L., Tincati, C., Bellistrì, G. M., Monforte, A. D., & Marchetti, G. C. (2009) · Clinical Infectious Diseases · doi:10.1086/595851 · Cited by 236 · see citing works
Mucosal immune responses to HIV-1 in elite controllers: a potential correlate of immune control
Ferre, A. L., Hunt, P. W., Critchfield, J. W., Young, D. H., Morris, M. M., Garcia, J. C., Pollard, R. B., Yee, H. F., Martin, J. N., Deeks, S. G., et al. (2008) · Blood · doi:10.1182/blood-2008-10-182709 · Cited by 237 · see citing works
Inflammation, immune activation, and cardiovascular disease in HIV
Nou, E., Lo, J., & Grinspoon, S. K. (2016) · AIDS · doi:10.1097/qad.0000000000001109 · Cited by 232 · see citing works
Understanding the benign nature of SIV infection in natural hosts
Silvestri, G., Paiardini, M., Pandrea, I., Lederman, M. M., & Sodora, D. L. (2007) · Journal of Clinical Investigation · doi:10.1172/jci33034 · Cited by 216 · see citing works
Sankaran, S., George, M. D., Reay, E., Guadalupe, M., Flamm, J., Prindiville, T. P., & Dandekar, S. (2007) · Journal of Virology · doi:10.1128/jvi.01449-07 · Cited by 208 · see citing works
Self-citationTotal HIV-1 DNA, a Marker of Viral Reservoir Dynamics with Clinical Implications
Avettand-Fènoël, V., Hocqueloux, L., Ghosn, J., Chéret, A., Frange, P., Mélard, A., Viard, J., & Rouzioux, C. (2016) · Clinical Microbiology Reviews · doi:10.1128/cmr.00015-16 · Cited by 207 · see citing works
Shen, R., Richter, H. E., Clements, R. H., Novak, L., Huff, K., Bimczok, D., Sankaran‐Walters, S., Dandekar, S., Clapham, P. R., Smythies, L. E., et al. (2009) · Journal of Virology · doi:10.1128/jvi.01796-08 · Cited by 204 · see citing works
Self-citationThe macrophage in HIV-1 infection: From activation to deactivation?
Herbein, G., & Varin, A. (2010) · Retrovirology · doi:10.1186/1742-4690-7-33 · Cited by 203 · see citing works
HIV Infection and Survival Among Women With Cervical Cancer
Dryden‐Peterson, S., Bvochora-Nsingo, M. F., Suneja, G., Efstathiou, J. A., Grover, S., Chiyapo, S., Ramogola‐Masire, D., Pusoentsi, M., Clayman, R. H., Mapes, A. C., et al. (2016) · Journal of Clinical Oncology · doi:10.1200/jco.2016.67.9613 · Cited by 202 · see citing works
Sustained virologic control in SIV + macaques after antiretroviral and α 4 β 7 antibody therapy
Byrareddy, S. N., Arthos, J. A., Cicala, C., Villinger, F. J., Ortiz, K., Little, D. M., Sidell, N., Kane, M. A., Yu, J., Jones, J. W., et al. (2016) · Science · doi:10.1126/science.aag1276 · Cited by 200 · see citing works
Mehandru, S., Poles, M. A., Tenner‐Racz, K., Manuelli, V., Jean-Pierre, P., Lopez, P., Shet, A., Low, A., Mohri, H., Boden, D., et al. (2006) · Journal of Virology · doi:10.1128/jvi.01739-06 · Cited by 197 · see citing works
Nanotechnology-based systems for the treatment and prevention of HIV/AIDS
das Neves, J., Amiji, M. M., Bahia, M. F., & Sarmento, B. F. C. C. (2009) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2009.11.017 · Cited by 197 · see citing works
The Role of Macrophages in HIV-1 Persistence and Pathogenesis
Kruize, Z., & Kootstra, N. A. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.02828 · Cited by 191 · see citing works
Macal, M., Sankaran, S., Chun, T.-W., Reay, E., Flamm, J., Prindiville, T., & Dandekar, S. (2008) · Mucosal Immunology · doi:10.1038/mi.2008.35 · Cited by 195 · see citing works
Self-citationIL-15 induces CD4+ effector memory T cell production and tissue emigration in nonhuman primates
Picker, L. J. (2006) · Journal of Clinical Investigation · doi:10.1172/jci27564 · Cited by 195 · see citing works
Jiang, G., Mendes, É. A., Kaiser, P. D., Wong, D. P., Tang, Y., Cai, I., Fenton, A. N., MELCHER, G. P., Hildreth, J. E. K., Thompson, G. R., et al. (2015) · PLoS Pathogens · doi:10.1371/journal.ppat.1005066 · Cited by 190 · see citing works
Self-citationCD4+ T Cell Depletion in Human Immunodeficiency Virus (HIV) Infection: Role of Apoptosis
Février, M., Dorgham, K., & Rebollo, A. (2011) · Viruses · doi:10.3390/v3050586 · Cited by 201 · see citing works
Levesque, M. C., Moody, M. A., Hwang, K.-K., Marshall, D. J., Whitesides, J. F., Amos, J. D., Gurley, T. C., Allgood, S. D., Haynes, B. B., Vandergrift, N., et al. (2009) · PLoS Medicine · doi:10.1371/journal.pmed.1000107 · Cited by 184 · see citing works
Innate immune recognition and activation during HIV infection
Mogensen, T. H., Melchjorsen, J., Larsen, C. S., & Paludan, S. R. (2010) · Retrovirology · doi:10.1186/1742-4690-7-54 · Cited by 184 · see citing works
Herbeuval, J., Nilsson, J., Boasso, A., Hardy, A. W., Kruhlak, M. J., Anderson, S. A., Dolan, M. J., Dy, M., Andersson, J., & Shearer, G. M. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0600363103 · Cited by 186 · see citing works
Gori, A., Rizzardini, G., Land, B. V., Amor, K. B., van Schaik, J., Torti, C., Quirino, T., Tincati, C., Bandera, A., Knol, J., et al. (2011) · Mucosal Immunology · doi:10.1038/mi.2011.15 · Cited by 185 · see citing works
Geldmacher, C., Schuetz, A., Ngwenyama, N., Casazza, J. P., Sanga, E., Saathoff, E., Boehme, C. C., Geis, S., Maboko, L., Singh, M., et al. (2008) · The Journal of Infectious Diseases · doi:10.1086/593017 · Cited by 185 · see citing works
Yukl, S. A., Shergill, A. K., Ho, T. N., Killian, M., Girling, V., Epling, L., Li, P., Wong, L. K., Crouch, P.-C., Deeks, S. G., et al. (2013) · The Journal of Infectious Diseases · doi:10.1093/infdis/jit308 · Cited by 184 · see citing works
Jolly, C. L., Booth, N. J., & Neil, S. J. D. (2010) · Journal of Virology · doi:10.1128/jvi.01447-10 · Cited by 184 · see citing works
Vaccination preserves CD4 memory T cells during acute simian immunodeficiency virus challenge
Mattapallil, J. J., Douek, D. C., Buckler-White, A. J., Montefiori, D. C., Letvin, N. L., Nabel, G. J., & Roederer, M. (2006) · The Journal of Experimental Medicine · doi:10.1084/jem.20060657 · Cited by 184 · see citing works
Gaardbo, J. C., Hartling, H. J., Gerstoft, J., & Nielsen, S. D. (2012) · Clinical and Developmental Immunology · doi:10.1155/2012/670957 · Cited by 179 · see citing works
The mucosal barrier and immune activation in HIV pathogenesis
Brenchley, J. M., & Douek, D. C. (2008) · Current Opinion in HIV and AIDS · doi:10.1097/coh.0b013e3282f9ae9c · Cited by 179 · see citing works
HIV pathogenesis: 25 years of progress and persistent challenges
Levy, J. A. (2008) · AIDS · doi:10.1097/qad.0b013e3283217f9f · Cited by 177 · see citing works
Epple, H., Schneider, T., Troeger, H., Kunkel, D., Allers, K., Moos, V., Amasheh, M., Loddenkemper, C., Fromm, M., Zeitz, M., et al. (2008) · Gut · doi:10.1136/gut.2008.150425 · Cited by 178 · see citing works
Kader, M., Wang, X., Piatak, M., Lifson, J. D., Roederer, M., Veazey, R. S., & Mattapallil, J. J. (2009) · Mucosal Immunology · doi:10.1038/mi.2009.90 · Cited by 176 · see citing works
HIV reservoirs: pathogenesis and obstacles to viral eradication and cure
Chun, T.-W., & Fauci, A. S. (2012) · AIDS · doi:10.1097/qad.0b013e328353f3f1 · Cited by 175 · see citing works
Hardy, A. W., Graham, D. R. M., Shearer, G. M., & Herbeuval, J. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0707244104 · Cited by 174 · see citing works
A review of vaccine research and development: The human immunodeficiency virus (HIV)☆
Girard, M. P., Osmanov, S., & Kiény, M. P. (2006) · Vaccine · doi:10.1016/j.vaccine.2006.02.031 · Cited by 174 · see citing works
Lambers, F. A. E., Prins, M., Thomas, X., Molenkamp, R., Kwa, D., Brinkman, K., van der Meer, J. T. M., & Schinkel, J. (2011) · AIDS · doi:10.1097/qad.0b013e32834bac44 · Cited by 167 · see citing works
Prendergast, A. J., Prado, J. G., Kang, Y.-H., Chen, F., Riddell, L., Luzzi, G. A., Goulder, P., & Klenerman, P. (2010) · AIDS · doi:10.1097/qad.0b013e3283344895 · Cited by 167 · see citing works
Mavigner, M., Cazabat, M., Dubois, M., L'Faqihi, F.-E., Réquena, M., Pasquier, C., Klopp, P., Amar, J., Alric, L., Barange, K., et al. (2011) · Journal of Clinical Investigation · doi:10.1172/jci59011 · Cited by 166 · see citing works
Dillon, S. M., Kibbie, J. J., Lee, E. J., Guo, K., Santiago, M. L., Austin, G. L., Gianella, S., LANDAY, A. L., Donovan, A. M., Frank, D. N., et al. (2016) · AIDS · doi:10.1097/qad.0000000000001366 · Cited by 165 · see citing works
Richard, J., Sindhu, S. T. A. K., Pham, T. N. Q., Belzile, J.-P., & Cohen, É. A. (2009) · Blood · doi:10.1182/blood-2009-08-237370 · Cited by 162 · see citing works
Sankaran, S., Guadalupe, M., Reay, E., George, M. D., Flamm, J., Prindiville, T. P., & Dandekar, S. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0503463102 · Cited by 161 · see citing works
Self-citationSex differences matter in the gut: effect on mucosal immune activation and inflammation
Sankaran‐Walters, S., Macal, M., Grishina, I., Nagy, L. H., Goulart, L., Coolidge, K., Li, J., Fenton, A. N., Williams, T., Miller, M. K., et al. (2013) · Biology of Sex Differences · doi:10.1186/2042-6410-4-10 · Cited by 160 · see citing works
Self-citationThe gut microbiome and HIV-1 pathogenesis
Dillon, S. M., Frank, D. N., & Wilson, C. C. (2016) · AIDS · doi:10.1097/qad.0000000000001289 · Cited by 162 · see citing works
Younas, M., Psomas, C. K., Reynes, J., & Corbeau, P. (2015) · HIV Medicine · doi:10.1111/hiv.12310 · Cited by 159 · see citing works
Immunopathogenesis of acute AIDS virus infection
Picker, L. J. (2006) · Current Opinion in Immunology · doi:10.1016/j.coi.2006.05.001 · Cited by 158 · see citing works
Stebbing, J., Gazzard, B., & Douek, D. C. (2004) · New England Journal of Medicine · doi:10.1056/nejmra032395 · Cited by 157 · see citing works
Th17 and regulatory T cells: implications for AIDS pathogenesis
Kanwar, B., Favre, D., & McCune, J. M. (2010) · Current Opinion in HIV and AIDS · doi:10.1097/coh.0b013e328335c0c1 · Cited by 154 · see citing works
von Rosenvinge, E. C., Song, Y., White, J. R., Maddox, C., Blanchard, T. G., & Fricke, W. F. (2013) · The ISME Journal · doi:10.1038/ismej.2013.33 · Cited by 153 · see citing works
Infectious Threats, the Intestinal Barrier, and Its Trojan Horse: Dysbiosis
Iacob, S. A., & Iacob, D. G. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.01676 · Cited by 152 · see citing works
Wallet, M. A., Rodriguez, C. A., Yin, L., Saporta, S., Chinratanapisit, S., Hou, W., Sleasman, J. W., & Goodenow, M. M. (2010) · AIDS · doi:10.1097/qad.0b013e328339e228 · Cited by 149 · see citing works
Berg, R., Melchjorsen, J., Rintahaka, J., Diget, E. A., Søby, S., Horan, K., Gorelick, R. J., Matikainen, S., Larsen, C. S., Østergaard, L. J., et al. (2012) · PLoS ONE · doi:10.1371/journal.pone.0029291 · Cited by 145 · see citing works
Hunt, P. W., Harrigan, P. R., Huang, W., Bates, M. P., Williamson, D. W., McCune, J. M., Price, R. W., Spudich, S., Lampiris, H. W., Hoh, R., et al. (2006) · The Journal of Infectious Diseases · doi:10.1086/507312 · Cited by 146 · see citing works
d’Ettorre, G., Ceccarelli, G., Giustini, N., Serafino, S., Calantone, N., Girolamo, G. D., Bianchi, L., Bellelli, V., Bartoli, T. A., Marcellini, S., et al. (2015) · PLoS ONE · doi:10.1371/journal.pone.0137200 · Cited by 146 · see citing works
- Authors
- Guadalupe, M., Reay, E., Sankaran, S., Prindiville, T., Flamm, J., McNeil, A., & Dandekar, S.
- Affiliations
- University of California, Davis (US)
- Departments of Medical Microbiology & Immunology
- The Permanente Medical Group Inc.
- Venue
- Journal of Virology
- Publisher
- American Society for Microbiology
- Published
- 2003-11
- Volume
- 77
- Issue
- 21
- Pages
- 11708-11717
- ISSN
- 0022-538X (ISSN-L)
- 1098-5514
- PMC
- PMC229357
- OpenAlex
- W2076120354
- Cited by
- 866
- References
- 24
- Citations by year
- 2026: 13 · 2025: 7 · 2024: 11 · 2023: 14 · 2022: 23 · 2021: 27 · 2020: 21 · 2019: 26 · 2018: 26 · 2017: 32 · 2016: 42 · 2015: 45 · 2014: 48 · 2013: 62 · 2012: 60
- FWCI
- 7.86
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Journal of Virology (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institutes of Health
- National Institute of Diabetes and Digestive and Kidney Diseases (DK 61297, R01DK061297)
- Topics
- Life Sciences › Immunology and Microbiology › Virology › HIV Research and Treatment
- Health Sciences › Medicine › Infectious Diseases › HIV/AIDS Research and Interventions
- Health Sciences › Medicine › Emergency Medicine › HIV-related health complications and treatments
- Keywords
- HIV-1 infection, CD4+ T cell depletion, gut-associated lymphoid tissue, highly active antiretroviral therapy, CD4+ T cell recovery, jejunal biopsy, lymphocyte homing, nonprogressors, gene expression profiling, early treatment initiation
- MeSH terms
- Adult, Cell Movement, Chronic Disease, Female, Flow Cytometry, Humans, Immunohistochemistry, Jejunum, Lymphocyte Activation, Lymphoid Tissue, Male, Middle Aged, Time Factors, CD4-Positive T-Lymphocytes, HIV-1, HIV Infections, CD8-Positive T-Lymphocytes, CD4 Lymphocyte Count, Antiretroviral Therapy, Highly Active
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review