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Cyclic di-GMP: the First 25 Years of a Universal Bacterial Second Messenger

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Römling, Ute, Galperin, Michael Y., Gomelsky, Mark·2013·Microbiology and Molecular Biology Reviews

Abstract

SUMMARY: Twenty-five years have passed since the discovery of cyclic dimeric (3′→5′) GMP (cyclic di-GMP or c-di-GMP). From the relative obscurity of an allosteric activator of a bacterial cellulose synthase, c-di-GMP has emerged as one of the most common and important bacterial second messengers. Cyclic di-GMP has been shown to regulate biofilm formation, motility, virulence, the cell cycle, differentiation, and other processes. Most c-di-GMP-dependent signaling pathways control the ability of bacteria to interact with abiotic surfaces or with other bacterial and eukaryotic cells. Cyclic di-GMP plays key roles in lifestyle changes of many bacteria, including transition from the motile to the sessile state, which aids in the establishment of multicellular biofilm communities, and from the virulent state in acute infections to the less virulent but more resilient state characteristic of chronic infectious diseases. From a practical standpoint, modulating c-di-GMP signaling pathways in bacteria could represent a new way of controlling formation and dispersal of biofilms in medical and industrial settings. Cyclic di-GMP participates in interkingdom signaling. It is recognized by mammalian immune systems as a uniquely bacterial molecule and therefore is considered a promising vaccine adjuvant. The purpose of this review is not to overview the whole body of data in the burgeoning field of c-di-GMP-dependent signaling. Instead, we provide a historic perspective on the development of the field, emphasize common trends, and illustrate them with the best available examples. We also identify unresolved questions and highlight new directions in c-di-GMP research that will give us a deeper understanding of this truly universal bacterial second messenger.

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Research works printed but not linked: 480

  1. 10.1038/325279a0 · DOI · Paper page
  2. 10.1099/mic.0.27099-0 · DOI
  3. 10.1016/j.mib.2004.02.007 · DOI
  4. 10.1146/annurev.genet.40.110405.090423 · DOI · Paper page
  5. 10.1111/j.1365-2958.2005.04697.x · DOI · Paper page
  6. 10.1016/j.mib.2006.02.010 · DOI
  7. 10.1146/annurev.micro.61.080706.093426 · DOI · Paper page
  8. 10.1038/nrmicro2109 · DOI · Paper page
  9. 10.1016/j.sbi.2011.03.016 · DOI
  10. 10.1111/j.1462-5822.2011.01619.x · DOI
  11. 10.1159/000219379 · DOI
  12. 10.1111/j.1462-2920.2011.02617.x · DOI
  13. 10.1038/nrmicro2203 · DOI · Paper page
  14. 10.1016/j.mib.2011.12.008 · DOI · Paper page
  15. 10.1128/JB.01418-07 · DOI · Paper page
  16. 10.1128/9781555816667 · doi:10.1128/9781555816667
  17. 10.1128/mr.55.1.35-58.1991 · DOI
  18. 10.1142/9789812813503_0009 · doi:10.1142/9789812813503_0009
  19. AmikamD WeinhouseH GalperinMY. 2010. Moshe Benziman and the discovery of c-di-GMP, p 11–23. In WolfeAJ VisickKL (ed), The second messenger cyclic di-GMP. ASM Press, Washington, DC.
  20. 10.1038/157659b0 · doi:10.1038/157659b0
  21. 10.1038/159064a0 · DOI
  22. 10.1042/bj3110921 · DOI
  23. 10.1128/jb.177.21.6223-6229.1995 · DOI
  24. 10.1128/JB.180.17.4416-4425.1998 · DOI · Paper page
  25. 10.1128/JB.180.7.1682-1690.1998 · DOI
  26. GalperinMY NataleDA AravindL KooninEV. 1999. A specialized version of the HD hydrolase domain implicated in signal transduction. J. Mol. Microbiol. Biotechnol. 1:303–305.
  27. 10.1046/j.1365-2958.1999.01358.x · doi:10.1046/j.1365-2958.1999.01358.x
  28. 10.1099/13500872-145-5-1253 · DOI
  29. 10.1046/j.1365-2958.2000.01822.x · DOI · Paper page
  30. 10.1046/j.1365-2958.2000.02196.x · DOI · Paper page
  31. 10.1093/nar/28.1.33 · DOI · Paper page
  32. 10.1111/j.1574-6968.2001.tb10880.x · doi:10.1111/j.1574-6968.2001.tb10880.x · Paper page
  33. 10.1111/j.1574-6968.2001.tb10814.x · doi:10.1111/j.1574-6968.2001.tb10814.x · Paper page
  34. 10.1021/bi0100236 · DOI
  35. 10.1073/pnas.0406134101 · DOI · Paper page
  36. 10.1101/gad.289504 · DOI · Paper page
  37. 10.1111/j.1365-2958.2004.04253.x · DOI · Paper page
  38. 10.1111/j.1365-2958.2004.04155.x · DOI · Paper page
  39. 10.1128/IAI.73.9.5873-5882.2005 · DOI · Paper page
  40. 10.1111/j.1365-2958.2004.04206.x · DOI · Paper page
  41. 10.1128/JB.187.5.1792-1798.2005 · DOI · Paper page
  42. 10.1016/j.femsle.2005.04.036 · DOI
  43. 10.1074/jbc.M504429200 · DOI · Paper page
  44. 10.1128/JB.187.14.4774-4781.2005 · DOI · Paper page
  45. 10.1074/jbc.M506500200 · DOI · Paper page
  46. 10.1128/AAC.49.3.1029-1038.2005 · DOI
  47. 10.1093/bioinformatics/bti739 · DOI · Paper page
  48. 10.1111/j.1365-2958.2006.05440.x · DOI · Paper page
  49. 10.1038/sj.emboj.7601918 · DOI
  50. 10.1073/pnas.0607738104 · DOI
  51. 10.1074/jbc.C600179200 · DOI
  52. 10.1128/JB.01510-06 · DOI
  53. 10.1074/jbc.M604819200 · DOI · Paper page
  54. 10.1128/CVI.00119-07 · DOI
  55. 10.4049/jimmunol.178.4.2171 · DOI
  56. 10.1128/IAI.01762-06 · doi:10.1128/iai.01762-06
  57. 10.1016/j.vaccine.2008.06.099 · DOI
  58. 10.1126/science.1159519 · DOI · Paper page
  59. 10.1111/j.1365-2958.2008.06411.x · DOI
  60. 10.1111/j.1462-2920.2009.02097.x · doi:10.1111/j.1462-2920.2009.02097.x
  61. 10.1128/JB.01756-07 · DOI · Paper page
  62. 10.1038/nature07966 · DOI · Paper page
  63. 10.1074/jbc.M808221200 · doi:10.1074/jbc.m808221200
  64. 10.1016/j.jmb.2010.07.050 · DOI
  65. 10.1126/science.1190713 · DOI · Paper page
  66. 10.1371/journal.pbio.1000588 · DOI · Paper page
  67. 10.1371/journal.pbio.1000587 · DOI
  68. 10.1038/nsmb.2333 · DOI · Paper page
  69. 10.1038/nsmb.1701 · DOI
  70. 10.1016/j.immuni.2012.03.019 · DOI · Paper page
  71. 10.1038/nsmb.2332 · DOI
  72. 10.1038/nsmb.2331 · DOI · Paper page
  73. 10.1038/nsmb.1702 · DOI · Paper page
  74. 10.1073/pnas.1018857108 · DOI
  75. 10.1016/j.molcel.2012.05.029 · DOI · Paper page
  76. 10.1016/0014-5793(85)80706-7 · DOI
  77. 10.1016/S0008-6215(00)90372-0 · DOI
  78. 10.1128/jb.171.12.6649-6655.1989 · DOI
  79. 10.1073/pnas.87.8.3235 · DOI
  80. 10.1074/jbc.M110.209007 · DOI
  81. 10.1016/j.jmb.2010.03.007 · doi:10.1016/j.jmb.2010.03.007
  82. 10.1126/science.1181185 · DOI · Paper page
  83. 10.1016/j.str.2009.06.010 · DOI
  84. 10.1016/j.str.2007.06.016 · DOI · Paper page
  85. 10.1021/ja207742q · DOI
  86. TalR GelfandDH CalhoonRD Ben-BassatA BenzimanM WongHC. 2 June 1998. Cyclic di-guanylate metabolic enzymes. US patent 5,759,828.
  87. 10.1021/bi901409g · DOI · Paper page
  88. 10.1016/j.jmb.2011.02.019 · DOI
  89. 10.1016/j.jmb.2009.03.015 · DOI
  90. 10.1016/j.jmb.2009.08.030 · DOI
  91. 10.1073/pnas.0507170102 · DOI · Paper page
  92. 10.1099/mic.0.2006/002824-0 · doi:10.1099/mic.0.2006/002824-0
  93. 10.1046/j.1365-2958.2003.03670.x · DOI · Paper page
  94. 10.1111/j.1462-2920.2007.01366.x · DOI
  95. 10.1111/j.1365-2958.2006.05386.x · DOI
  96. 10.1073/pnas.0600345103 · DOI · Paper page
  97. 10.1128/JB.185.24.7068-7076.2003 · DOI · Paper page
  98. 10.1111/j.1365-2958.2006.05156.x · doi:10.1111/j.1365-2958.2006.05156.x
  99. 10.1101/gr.278202 · DOI · Paper page
  100. 10.1128/JB.01887-05 · DOI · Paper page
  101. 10.1016/j.mib.2010.01.005 · DOI · Paper page
  102. 10.1128/JB.184.23.6481-6489.2002 · DOI · Paper page
  103. 10.1146/annurev-micro-121809-151631 · DOI · Paper page
  104. 10.1002/cfg.66 · DOI
  105. 10.1046/j.1365-2958.2003.03401.x · DOI · Paper page
  106. 10.1002/1097-0134(20010201)42:2<210::AID-PROT80>3.0.CO;2-8 · DOI
  107. 10.1007/s00018-006-6072-0 · DOI
  108. 10.1007/112_0603 · DOI
  109. 10.1074/jbc.M704702200 · DOI
  110. 10.1016/S0021-9258(19)84115-7 · DOI
  111. 10.1093/nar/gkq382 · DOI
  112. 10.1111/j.1365-2958.2011.07849.x · doi:10.1111/j.1365-2958.2011.07849.x
  113. 10.1093/nar/gkr1065 · DOI · Paper page
  114. 10.1107/S090744491104039X · doi:10.1107/s090744491104039x
  115. 10.1128/JB.00165-08 · doi:10.1128/jb.00165-08
  116. 10.1371/journal.pone.0035206 · DOI
  117. 10.1128/JB.00286-11 · DOI
  118. 10.1128/JB.00560-12 · DOI
  119. 10.1016/S0968-0004(02)02181-3 · DOI · Paper page
  120. 10.1016/j.tim.2011.05.002 · DOI
  121. 10.1021/jp066582 · doi:10.1021/jp066582
  122. 10.1128/JB.00327-09 · doi:10.1128/jb.00327-09
  123. 10.1074/jbc.R111.241976 · DOI
  124. 10.1111/j.1462-2920.2008.01842.x · DOI
  125. 10.1128/IAI.05153-11 · DOI
  126. 10.1128/mBio.00163-11 · DOI
  127. 10.1021/bi901121w · doi:10.1021/bi901121w
  128. 10.1016/0168-9525(96)81420-X · doi:10.1016/0168-9525(96)81420-x
  129. 10.1146/annurev.micro.62.081307.162903 · DOI · Paper page
  130. 10.1074/jbc.M110.196220 · doi:10.1074/jbc.m110.196220
  131. 10.1128/JB.01462-07 · DOI
  132. 10.1128/JB.184.21.5946-5954.2002 · DOI
  133. 10.1073/pnas.1113790108 · DOI
  134. 10.1099/mic.0.053892-0 · DOI
  135. 10.1371/journal.pone.0015072 · DOI
  136. 10.1074/jbc.M111.231340 · DOI
  137. 10.1093/nar/gkq1189 · DOI · Paper page
  138. 10.1186/1471-2180-5-35 · DOI · Paper page
  139. 10.1002/pro.2093 · DOI
  140. 10.1016/j.tim.2012.02.008 · DOI
  141. 10.1073/pnas.88.12.5472 · doi:10.1073/pnas.88.12.5472
  142. 10.1016/S0014-5793(97)01202-7 · DOI · Paper page
  143. 10.1128/jb.178.1.46-53.1996 · doi:10.1128/jb.178.1.46-53.1996
  144. 10.1074/jbc.M611593200 · DOI · Paper page
  145. 10.1111/j.1574-695X.2009.00635.x · DOI
  146. 10.1111/j.1365-2958.2007.05817.x · DOI · Paper page
  147. 10.1002/prot.21199 · DOI
  148. 10.1002/pro.557 · doi:10.1002/pro.557
  149. 10.1371/journal.pone.0022036 · DOI
  150. 10.1371/journal.ppat.1002493 · DOI
  151. 10.1016/j.cell.2010.01.018 · DOI · Paper page
  152. 10.1111/j.1365-2958.2010.07179.x · DOI
  153. 10.1016/j.molcel.2010.03.001 · DOI · Paper page
  154. 10.1099/mic.0.2007/015305-0 · DOI
  155. 10.1371/journal.ppat.1002204 · DOI · Paper page
  156. 10.1016/j.jmb.2009.07.065 · DOI
  157. 10.1002/prot.22330 · doi:10.1002/prot.22330
  158. 10.1128/JB.00564-08 · DOI
  159. 10.1101/gad.502409 · DOI · Paper page
  160. 10.1111/j.1365-2958.2012.08015.x · doi:10.1111/j.1365-2958.2012.08015.x
  161. 10.1111/j.1365-2958.2007.05879.x · DOI · Paper page
  162. 10.1074/jbc.M112.375378 · DOI
  163. 10.1073/pnas.0808933106 · DOI · Paper page
  164. 10.1128/JB.05483-11 · DOI
  165. 10.1111/j.1365-2958.2008.06281.x · DOI · Paper page
  166. 10.1128/JB.05167-11 · DOI
  167. 10.1016/j.jmb.2009.11.076 · DOI
  168. 10.1111/j.1365-2958.2011.07814.x · doi:10.1111/j.1365-2958.2011.07814.x
  169. 10.1128/JB.01173-09 · doi:10.1128/jb.01173-09
  170. 10.1128/JB.00845-09 · DOI
  171. 10.1128/JB.05807-11 · DOI
  172. 10.1128/JB.06695-11 · DOI
  173. 10.1111/j.1462-2920.2010.02368.x · DOI
  174. 10.1016/j.mimet.2011.11.015 · doi:10.1016/j.mimet.2011.11.015
  175. 10.1016/j.jprot.2012.05.033 · DOI
  176. 10.1073/pnas.1018949108 · DOI
  177. 10.1186/gb-2007-8-11-r239 · DOI · Paper page
  178. 10.1371/journal.pgen.1002039 · DOI
  179. 10.1111/j.1365-2958.2010.07338.x · DOI
  180. 10.1111/j.1365-2958.2010.07470.x · DOI · Paper page
  181. 10.1038/nature11313 · DOI
  182. 10.1093/emboj/19.20.5288 · DOI · Paper page
  183. 10.1073/pnas.1205037109 · DOI
  184. 10.1038/221838a0 · DOI · Paper page
  185. 10.1111/j.1751-1097.2010.00724.x · DOI
  186. 10.1111/j.1365-2958.2012.08106.x · DOI
  187. 10.1021/bi201753f · DOI
  188. 10.1016/j.molcel.2012.03.023 · DOI
  189. 10.1111/j.1462-2920.2004.00633.x · DOI · Paper page
  190. 10.1128/JB.185.1.285-294.2003 · DOI
  191. 10.1073/pnas.0912839107 · doi:10.1073/pnas.0912839107
  192. 10.1371/journal.ppat.1002760 · DOI
  193. 10.1371/journal.ppat.1002133 · DOI
  194. 10.1128/JB.00701-08 · DOI
  195. 10.1128/JB.00157-12 · DOI
  196. 10.1093/nar/gks923 · DOI
  197. 10.1101/gad.475808 · DOI · Paper page
  198. 10.1128/JB.00003-12 · DOI · Paper page
  199. 10.1111/j.1462-2920.2008.01658.x · DOI · Paper page
  200. 10.1128/JB.00585-07 · DOI · Paper page

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Metadata

Authors
Römling, U., Galperin, M. Y., & Gomelsky, M.
Venue
Microbiology and Molecular Biology Reviews
Published
2013-03
Volume
77
Issue
1
Pages
1-52
ISSN
  • 1092-2172 (ISSN-L)
  • 1098-5557
OpenAlex
W2132665880
Cited by
1,700
References
7
FWCI
10.21
Type
journal article
Language
en
Open access
green
Licence
journals.asm.org/non-commercial-tdm-license (tdm)

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Römling, U., Galperin, M. Y., & Gomelsky, M. (2013). Cyclic di-GMP: the First 25 Years of a Universal Bacterial Second Messenger. Microbiology and Molecular Biology Reviews. https://doi.org/10.1128/mmbr.00043-12

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