Lead-DBS v2: Towards a comprehensive pipeline for deep brain stimulation imaging

Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single subject brain

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An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest

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Improved Optimization for the Robust and Accurate Linear Registration and Motion Correction of Brain Images

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Cortical Surface-Based Analysis

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FieldTrip: open source software for advanced analysis of MEG, EEG, and invasive electrophysiological data

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Statistical parametric maps in functional imaging: A general linear approach

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The organization of the human cerebral cortex estimated by intrinsic functional connectivity

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3D Slicer as an image computing platform for the Quantitative Imaging Network

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A fast diffeomorphic image registration algorithm

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Unified segmentation

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The organization of the human cerebellum estimated by intrinsic functional connectivity

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N4ITK: Improved N3 Bias Correction

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Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain

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A multi-modal parcellation of human cerebral cortex

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Rhythms of the Brain

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Automatically Parcellating the Human Cerebral Cortex

Fischl, B. R. (2003) · Cerebral Cortex · doi:10.1093/cercor/bhg087 · Cited by 4,208 · see citing works

A new SPM toolbox for combining probabilistic cytoarchitectonic maps and functional imaging data

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Local-global parcellation of the human cerebral cortex from intrinsic functional connectivity MRI

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The Human Brainnetome Atlas: A New Brain Atlas Based on Connectional Architecture

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Automatic parcellation of human cortical gyri and sulci using standard anatomical nomenclature

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Bayesian analysis of neuroimaging data in FSL

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Network-based statistic: identifying differences in brain networks

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Non-invasive mapping of connections between human thalamus and cortex using diffusion imaging

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Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration

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Unbiased nonlinear average age-appropriate brain templates from birth to adulthood

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The Parkinson Progression Marker Initiative (PPMI)

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A whole brain fMRI atlas generated via spatially constrained spectral clustering

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Natural speech reveals the semantic maps that tile human cerebral cortex

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Gibbs-ringing artifact removal based on local subvoxel-shifts

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Generation and evaluation of a cortical area parcellation from resting-state correlations

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Tractography-based connectomes are dominated by false-positive connections

Maier-Hein, K. H., Neher, P., Houde, J.-C., Côté, M.-A., Garyfallidis, E., Zhong, J., Chamberland, M., Yeh, F.-C., Lin, Y.-C., Ji, Q., et al. (2016) · doi:10.1101/084137 · Cited by 1,361 · see citing works

CAT: a computational anatomy toolbox for the analysis of structural MRI data

Christian Gaser, B., Dahnke, R., Thompson, P. M., Kurth, F., Eileen Luders, A., & Initiative, T. A. D. N. (2024) · GigaScience · doi:10.1093/gigascience/giae049 · Cited by 1,315 · see citing works

Three‐dimensional maximum probability atlas of the human brain, with particular reference to the temporal lobe

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The first step for neuroimaging data analysis: DICOM to NIfTI conversion

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Generalized ${ q}$-Sampling Imaging

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A spatially unbiased atlas template of the human cerebellum

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BigBrain: An Ultrahigh-Resolution 3D Human Brain Model

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Quantitative susceptibility mapping (QSM): Decoding <scp>MRI</scp> data for a tissue magnetic biomarker

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The NKI-Rockland Sample: A Model for Accelerating the Pace of Discovery Science in Psychiatry

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Cellular Effects of Deep Brain Stimulation: Model-Based Analysis of Activation and Inhibition

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Structural Brain Magnetic Resonance Imaging of Limbic and Thalamic Volumes in Pediatric Bipolar Disorder

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Correlations and anticorrelations in resting-state functional connectivity MRI: A quantitative comparison of preprocessing strategies

Weissenbacher, A., Kasess, C., Gerstl, F., Lanzenberger, R., Moser, E., & Windischberger, C. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2009.05.005 · Cited by 776 · see citing works

The organization of the human striatum estimated by intrinsic functional connectivity

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Decreased volume of left and total anterior insular lobule in schizophrenia

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Three-dimensional locations and boundaries of motor and premotor cortices as defined by functional brain imaging: A meta-analysis

Mayka, M. A., Corcos, D. M., Leurgans, S. E., & Vaillancourt, D. E. (2006) · NeuroImage · doi:10.1016/j.neuroimage.2006.02.004 · Cited by 731 · see citing works

Connectivity Predicts deep brain stimulation outcome in <scp>P</scp> arkinson disease

Horn, A., Reich, M., Vorwerk, J., Li, N., Wenzel, G., Fang, Q., Schmitz‐Hübsch, T., Nickl, R., Kupsch, A., Volkmann, J., et al. (2017) · Annals of Neurology · doi:10.1002/ana.24974 · Cited by 711 · see citing works

Accuracy of Intraoperative Computed Tomography during Deep Brain Stimulation Procedures: Comparison with Postoperative Magnetic Resonance Imaging

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Lead-DBS: A toolbox for deep brain stimulation electrode localizations and visualizations

Horn, A., & Kühn, A. A. (2014) · NeuroImage · doi:10.1016/j.neuroimage.2014.12.002 · Cited by 670 · see citing works

Testing anatomically specified hypotheses in functional imaging using cytoarchitectonic maps

Eickhoff, S. B., Heim, S., Zilles, K., & Amunts, K. (2006) · NeuroImage · doi:10.1016/j.neuroimage.2006.04.204 · Cited by 643 · see citing works

CAT – A Computational Anatomy Toolbox for the Analysis of Structural MRI DataPreprint

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Population-averaged atlas of the macroscale human structural connectome and its network topology

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Toward defining deep brain stimulation targets in MNI space: A subcortical atlas based on multimodal MRI, histology and structural connectivity

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Centenary of Brodmann's map — conception and fate

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Pushing the limits of in vivo diffusion MRI for the Human Connectome Project

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Hypothalamic Abnormalities in Schizophrenia: Sex Effects and Genetic Vulnerability

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Network localization of neurological symptoms from focal brain lesions

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A high-resolution probabilistic in vivo atlas of human subcortical brain nuclei

Pauli, W. M., Nili, A. N., & Tyszka, J. M. (2018) · Scientific Data · doi:10.1038/sdata.2018.63 · Cited by 505 · see citing works

Neuroanatomic Connectivity of the Human Ascending Arousal System Critical to Consciousness and Its Disorders

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Diffeomorphic registration using geodesic shooting and Gauss–Newton optimisation

Ashburner, J., & Friston, K. J. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2010.12.049 · Cited by 494 · see citing works

Prospective Validation That Subgenual Connectivity Predicts Antidepressant Efficacy of Transcranial Magnetic Stimulation Sites

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Resting oscillatory cortico-subthalamic connectivity in patients with Parkinson’s disease

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Intrinsic functional relations between human cerebral cortex and thalamus

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Quantitative evaluation of 10 tractography algorithms on a realistic diffusion MR phantom

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Extracellular Stimulation of Central Neurons: Influence of Stimulus Waveform and Frequency on Neuronal Output

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Imaging the deep cerebellar nuclei: A probabilistic atlas and normalization procedure

Diedrichsen, J., Maderwald, S., Küper, M., Thürling, M., Rabe, K., Gizewski, E. R., Ladd, M. E., & Timmann, D. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.10.035 · Cited by 382 · see citing works

A mean three-dimensional atlas of the human thalamus: Generation from multiple histological data

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Automatic segmentation of brain MRIs of 2-year-olds into 83 regions of interest

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The structural–functional connectome and the default mode network of the human brain

Horn, A., Ostwald, D., Reisert, M., & Blankenburg, F. (2013) · NeuroImage · doi:10.1016/j.neuroimage.2013.09.069 · Cited by 355 · see citing works

Anatomical and Functional Connectivity of Cytoarchitectonic Areas within the Human Parietal Operculum

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Performing label-fusion-based segmentation using multiple automatically generated templates

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Multi-atlas segmentation of the whole hippocampus and subfields using multiple automatically generated templates

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Stereotactic Atlas of the Human Thalamus and Basal Ganglia

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Global fiber reconstruction becomes practical

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A guideline for head volume conductor modeling in EEG and MEG

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A three-dimensional, histological and deformable atlas of the human basal ganglia. I. Atlas construction based on immunohistochemical and MRI data

Yelnik, J., Bardinet, É., Dormont, D., Malandain, G., Sebastien Ourselin, A., Tandé, D., Karachi, C., Ayache, N., Cornu, P., & Agid, Y. (2006) · NeuroImage · doi:10.1016/j.neuroimage.2006.09.026 · Cited by 304 · see citing works

The creation of a brain atlas for image guided neurosurgery using serial histological data

Chakravarty, M. M., Bertrand, G., Hodge, C. P., Sadikot, A. F., & Collins, D. L. (2006) · NeuroImage · doi:10.1016/j.neuroimage.2005.09.041 · Cited by 295 · see citing works

AICHA: An atlas of intrinsic connectivity of homotopic areas

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A novel approach to the human connectome: Ultra-high resolution mapping of fiber tracts in the brain

Axer, M., Amunts, K., Gräßel, D., Palm, C., Dammers, J., Axer, H., Pietrzyk, U., & Zilles, K. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.08.075 · Cited by 280 · see citing works

The Subthalamic Nucleus Is One of Multiple Innervation Sites for Long-Range Corticofugal Axons: A Single-Axon Tracing Study in the Rat

Kita, T., & Kita, H. (2012) · Journal of Neuroscience · doi:10.1523/jneurosci.5717-11.2012 · Cited by 276 · see citing works

A human brain network derived from coma-causing brainstem lesions

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Toward an electrophysiological “sweet spot” for deep brain stimulation in the subthalamic nucleus

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PaCER - A fully automated method for electrode trajectory and contact reconstruction in deep brain stimulation

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Subthalamic deep brain stimulation sweet spots and hyperdirect cortical connectivity in Parkinson’s disease

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A high resolution and high contrast MRI for differentiation of subcortical structures for DBS targeting: The Fast Gray Matter Acquisition T1 Inversion Recovery (FGATIR)

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Relationship between Neural Activation and Electric Field Distribution during Deep Brain Stimulation

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Current steering to control the volume of tissue activated during deep brain stimulation

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Reply: Oscillatory coupling of the subthalamic nucleus in obsessive compulsive disorder

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PrAGMATiC: a Probabilistic and Generative Model of Areas Tiling the CortexPreprint

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Neural correlates of lexical decisions in Parkinson’s disease revealed with multivariate extraction of cortico-subthalamic interactions

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7 Tesla MRI of the ex vivo human brain at 100 micron resolution

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Holographic Reconstruction of Axonal Pathways in the Human Brain

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Deep brain stimulation: Imaging on a group level

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Probabilistic Mapping of Deep Brain Stimulation: Insights from 15 Years of Therapy

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Left Prefrontal Connectivity Links Subthalamic Stimulation with Depressive Symptoms

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Optimal deep brain stimulation sites and networks for stimulation of the fornix in Alzheimer’s disease

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Metastable oscillatory modes emerge from synchronization in the brain spacetime connectome

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The aperiodic exponent of subthalamic field potentials reflects excitation/inhibition balance in Parkinsonism

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Modulation of beta bursts in subthalamic sensorimotor circuits predicts improvement in bradykinesia

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Optimal deep brain stimulation sites and networks for cervical vs. generalized dystonia

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Evaluation of methodologies for computing the deep brain stimulation volume of tissue activated

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PSA and VIM DBS efficiency in essential tremor depends on distance to the dentatorubrothalamic tract

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Electrocorticography is Superior to Subthalamic Local Field Potentials for Movement Decoding in Parkinson's Disease

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Toward personalized medicine in connectomic deep brain stimulation

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A neural network for tics: insights from causal brain lesions and deep brain stimulation

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Probabilistic Mapping Reveals Optimal Stimulation Site in Essential Tremor

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