PPAR-δ senses and orchestrates clearance of apoptotic cells to promote tolerance
Open accessAbstract
Macrophages rapidly engulf apoptotic cells to limit the release of noxious cellular contents and to restrict autoimmune responses against self antigens. Although factors participating in recognition and engulfment of apoptotic cells have been identified, the transcriptional basis for the sensing and the silent disposal of apoptotic cells is unknown. Here we show that peroxisome proliferator-activated receptor-delta (PPAR-delta) is induced when macrophages engulf apoptotic cells and functions as a transcriptional sensor of dying cells. Genetic deletion of PPAR-delta decreases expression of opsonins such as complement component-1qb (C1qb), resulting in impairment of apoptotic cell clearance and reduction in anti-inflammatory cytokine production. This increases autoantibody production and predisposes global and macrophage-specific Ppard(-/-) mice to autoimmune kidney disease, a phenotype resembling the human disease systemic lupus erythematosus. Thus, PPAR-delta has a pivotal role in orchestrating the timely disposal of apoptotic cells by macrophages, ensuring that tolerance to self is maintained.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Modulating microglial activation status by targeting nuclear receptors appears to restore the competence of these cells to phagocytose and clear amyloid in the AD brain.
“Thus, modulating microglial activation status by targeting nuclear receptors appears to restore the competence of these cells to phagocytose and clear amyloid in the AD brain (Mukundan et al., 2009; Chinetti-Gbaguidi et al., 2011).”
From Mechanisms Underlying the Rapid Peroxisome Proliferator-Activated Receptor-γ-Mediated Amyloid Clearance and Reversal of Cognitive Deficits in a Murine Model of Alzheimer's Disease (2012) · cites this paper as Mukundan et al., 2009
The Results section ('PPAR-δ regulates opsonin gene expression in macrophages'; page unavailable) reports that activating the nuclear receptor PPAR-δ increased macrophage uptake of apoptotic cells. The paper does not establish that targeting nuclear receptors restores microglial clearance of amyloid in an Alzheimer’s disease brain; its experiments concern macrophages and apoptotic cells. (LLM, conf=0.88)
Experimental — accuracy not yet measuredActivation of nuclear receptors suppresses NFκB-mediated inflammatory responses and activates phagocytic machinery.
“Activation of these nuclear receptors suppresses NFκB-mediated inflammatory responses and activates their phagocytic machinery (Zelcer et al., 2007; Mukundan et al., 2009; Glass and Saijo, 2010).”
From Mechanisms Underlying the Rapid Peroxisome Proliferator-Activated Receptor-γ-Mediated Amyloid Clearance and Reversal of Cognitive Deficits in a Murine Model of Alzheimer's Disease (2012) · cites this paper as Mukundan et al., 2009
The Results section reports that PPAR-δ activation increases opsonin expression and apoptotic-cell uptake, and that PPAR-δ is required for the observed suppression of pro-inflammatory cytokines after apoptotic-cell feeding. The cited paper does not establish that this suppression is NFκB-mediated. Page numbers are unavailable in our copy. (LLM, conf=0.86)
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Macrophage-specific PPARγ controls alternative activation and improves insulin resistance
Odegaard, J. I., Ricardo-Gonzalez, R. R., Goforth, M. H., Morel, C. R., Subramanian, V., Mukundan, L., Eagle, A. R., Vats, D., Brombacher, F., Ferrante, A. W., et al. (2007) · Nature · doi:10.1038/nature05894 · Cited by 2,107 · cited 1× · see citing works
“Because we and others have previously shown that PPARs regulate the macrophage program of alternative activatio”
BackgroundSelf-citationNuclear Receptors and Lipid Physiology: Opening the X-Files
Chawla, A., Repa, J. J., Evans, R. M., & Mangelsdorf, D. J. (2001) · Science · doi:10.1126/science.294.5548.1866 · Cited by 2,085 · see citing works
Self-citationImmunosuppressive effects of apoptotic cells
Voll, R. E., Herrmann, M., Roth, E. A., Stach, C., Kalden, J. R., & Girkontaite, I. (1997) · Nature · doi:10.1038/37022 · Cited by 1,787 · see citing works
PPARs and the complex journey to obesity
Evans, R. M., Barish, G. D., & Wang, Y.-X. (2004) · Nature Medicine · doi:10.1038/nm1025 · Cited by 1,621 · see citing works
A blast from the past: clearance of apoptotic cells regulates immune responses
Savill, J., Dransfield, I., Gregory, C. D., & Haslett, C. (2002) · Nature reviews. Immunology · doi:10.1038/nri957 · Cited by 1,574 · see citing works
Corpse clearance defines the meaning of cell death
Savill, J., & Fadok, V. A. (2000) · Nature · doi:10.1038/35037722 · Cited by 1,535 · see citing works
Homozygous C1q deficiency causes glomerulonephritis associated with multiple apoptotic bodies
Botto, M., Dell' Agnola, C., Bygrave, A. E., Thompson, E. M., Cook, H. T., Petry, F., Loos, M., Pandolfi, P. P., & Walport, M. J. (1998) · Nature Genetics · doi:10.1038/ng0598-56 · Cited by 1,434 · see citing works
Phagocytosis and clearance of apoptotic cells is mediated by MER
Scott, R. S., McMahon, E. J., Pop, S. M., Reap, E. A., Caricchio, R., Cohen, P. L., Earp, H. S., & Matsushima, G. K. (2001) · Nature · doi:10.1038/35075603 · Cited by 1,215 · see citing works
Identification of Tim4 as a phosphatidylserine receptor
Miyanishi, M., Tada, K., Koike, M., Uchiyama, Y., Kitamura, T., & Nagata, S. (2007) · Nature · doi:10.1038/nature06307 · Cited by 1,180 · see citing works
T-cell apoptosis detected in situ during positive and negative selection in the thymus
Surh, C. D., & Sprent, J. (1994) · Nature · doi:10.1038/372100a0 · Cited by 1,082 · see citing works
Autoimmune Disease and Impaired Uptake of Apoptotic Cells in MFG-E8-Deficient Mice
Hanayama, R., Tanaka, M., Miyasaka, K., Aozasa, K., Koike, M., Uchiyama, Y., & Nagata, S. (2004) · Science · doi:10.1126/science.1094359 · Cited by 992 · see citing works
Regulation of Phagosome Maturation by Signals from Toll-Like Receptors
Blander, J. M., & Medzhitov, R. (2004) · Science · doi:10.1126/science.1096158 · Cited by 991 · see citing works
Transcriptional Regulation of Metabolism
Desvergne, B., Michalik, L., & Wahli, W. (2006) · Physiological Reviews · doi:10.1152/physrev.00025.2005 · Cited by 896 · see citing works
Alternative M2 Activation of Kupffer Cells by PPARδ Ameliorates Obesity-Induced Insulin Resistance
Odegaard, J. I., Ricardo-González, R. R., Eagle, A. R., Vats, D., Morel, C. R., Goforth, M. H., Subramanian, V., Mukundan, L., Ferrante, A. W., & Chawla, A. (2008) · Cell Metabolism · doi:10.1016/j.cmet.2008.04.003 · Cited by 840 · see citing works
Self-citationFeatures of systemic lupus erythematosus in Dnase1-deficient mice
Napirei, M., Karsunky, H., Zevnik, B., Stephan, H., Mannherz, H. G., & Möröy, T. (2000) · Nature Genetics · doi:10.1038/76032 · Cited by 789 · see citing works
Taylor, P. R., Carugati, A., Fadok, V. A., Cook, H. T., Andrews, M., Carroll, M. C., Savill, J., Henson, P. M., Botto, M., & Walport, M. J. (2000) · The Journal of Experimental Medicine · doi:10.1084/jem.192.3.359 · Cited by 724 · see citing works
Kang, K., Reilly, S. M., Karabacak, V., Gangl, M. R., Fitzgerald, K., Hatano, B., & Lee, C.-H. (2008) · Cell Metabolism · doi:10.1016/j.cmet.2008.04.002 · Cited by 699 · see citing works
A-González, N., Bensinger, S. J., Hong, C., Beceiro, S., Bradley, M. N., Zelcer, N., Deniz, J. M., Ramírez, C. M., Díaz, M., Gallardo, G., et al. (2009) · Immunity · doi:10.1016/j.immuni.2009.06.018 · Cited by 674 · see citing works
PPAR : a dagger in the heart of the metabolic syndrome
Barish, G. D. (2006) · Journal of Clinical Investigation · doi:10.1172/jci27955 · Cited by 641 · see citing works
Cohen, P. L., Caricchio, R., Abraham, V., Camenisch, T. D., Jennette, J. C., Roubey, R. A. S., Earp, H. S., Matsushima, G. K., & Reap, E. A. (2002) · The Journal of Experimental Medicine · doi:10.1084/jem.20012094 · Cited by 637 · see citing works
Engulfment of apoptotic cells: signals for a good meal
Ravichandran, K. S., & Lorenz, U. M. (2007) · Nature reviews. Immunology · doi:10.1038/nri2214 · Cited by 634 · see citing works
Barak, Y., Liao, D., He, W., Ong, E. S., Nelson, M. C., Olefsky, J. M., Boland, R., & Evans, R. M. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.012610299 · Cited by 586 · see citing works
Systemic Exposure to Irradiated Apoptotic Cells Induces Autoantibody Production
Mevorach, D., Zhou, J. L., Song, X., & Elkon, K. B. (1998) · The Journal of Experimental Medicine · doi:10.1084/jem.188.2.387 · Cited by 567 · see citing works
Lauber, K., Blumenthal, S. G., Waibel, M., & Wesselborg, S. (2004) · Molecular Cell · doi:10.1016/s1097-2765(04)00237-0 · Cited by 552 · see citing works
Phagocyte receptors for apoptotic cells: recognition, uptake, and consequences
Fadok, V. A., Bratton, D. L., & Henson, P. M. (2001) · Journal of Clinical Investigation · doi:10.1172/jci14122 · Cited by 474 · see citing works
Clearance of apoptotic cells by phagocytes
Erwig, L.-P., & Henson, P. M. (2008) · Cell Death & Differentiation · doi:10.1038/sj.cdd.4402184 · Cited by 422 · see citing works
Apoptotic Cells with Oxidation-specific Epitopes Are Immunogenic and Proinflammatory
Chang, M.-K., Binder, C. J., Miller, Y. I., Subbanagounder, G., Silverman, G. J., Berliner, J. A., & Witztum, J. L. (2004) · The Journal of Experimental Medicine · doi:10.1084/jem.20031763 · Cited by 334 · see citing works
The phosphatidylserine receptor: a crucial molecular switch?
Henson, P. M., Bratton, D. L., & Fadok, V. A. (2001) · Nature Reviews Molecular Cell Biology · doi:10.1038/35085094 · Cited by 321 · see citing works
Nuclear receptors in macrophage biology: at the crossroads of lipid metabolism and inflammation.
Castrillo, A., & Tontonoz, P. (2004) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev.cellbio.20.012103.134432 · Cited by 320 · see citing works
Satoh, M., & Reeves, W. H. (1994) · The Journal of Experimental Medicine · doi:10.1084/jem.180.6.2341 · Cited by 320 · see citing works
Sznaidman, M. L., Haffner, C. D., Maloney, P., Fivush, A. M., Chao, E. Y. H., Goreham, D. M., Sierra, M. L., Grumelec, C. L., Xu, H. E., Montana, V. G., et al. (2003) · Bioorganic & Medicinal Chemistry Letters · doi:10.1016/s0960-894x(03)00207-5 · Cited by 313 · see citing works
Satoh, M., Kumar, A., Kanwar, Y. S., & Reeves, W. H. (1995) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.92.24.10934 · Cited by 226 · see citing works
Morel, L. M., Yu, Y., Blenman, K., Caldwell, R. A., & Wakeland, E. K. (1996) · Mammalian Genome · doi:10.1007/s003359900098 · Cited by 177 · see citing works
Interaction of mutant lpr gene with background strain influences renal disease
Kelley, V. E., & Roths, J. B. (1985) · Clinical Immunology and Immunopathology · doi:10.1016/0090-1229(85)90153-9 · Cited by 169 · see citing works
Unraveling the genetics of systemic lupus erythematosus
Harley, J. B., Kelly, J. A., & Kaufman, K. M. (2006) · Springer Seminars in Immunopathology · doi:10.1007/s00281-006-0040-5 · Cited by 144 · see citing works
Review of recent genome‐wide association scans in lupus
Graham, R., Hom, G., Ortmann, W. A., & Behrens, T. W. (2009) · Journal of Internal Medicine · doi:10.1111/j.1365-2796.2009.02096.x · Cited by 135 · see citing works
Wermeling, F., Chen, Y., Pikkarainen, T., Scheynius, A., Winqvist, O., Izui, S., Ravetch, J. V., Tryggvason, K., & Karlsson, M. C. I. (2007) · The Journal of Experimental Medicine · doi:10.1084/jem.20070600 · Cited by 135 · see citing works
Petry, F., Botto, M., Holtappels, R., Walport, M. J., & Loos, M. (2001) · The Journal of Immunology · doi:10.4049/jimmunol.167.7.4033 · Cited by 117 · see citing works
Slingsby, J. H., Norsworthy, P. J., Pearce, G., Vaishnaw, A. K., Issler, H., Morley, B. J., & Walport, M. J. (1996) · Arthritis & Rheumatism · doi:10.1002/art.1780390419 · Cited by 96 · see citing works
Breitkopf, K., Sawitza, I., Westhoff, J. H., Wickert, L., Dooley, S., & Gressner, A. M. (2005) · Gut · doi:10.1136/gut.2004.042911 · Cited by 77 · see citing works
Clearance: The Last and Often Forgotten Stage of Apoptosis
Fadok, V. A. (1999) · Journal of Mammary Gland Biology and Neoplasia · doi:10.1023/a:1011384009787 · Cited by 75 · see citing works
A novel flow cytometric method for quantifying phagocytosis of apoptotic cells
Hess, K. L., Babcock, G. F., Askew, D. S., & Cook‐Mills, J. M. (1997) · Cytometry · doi:10.1002/(sici)1097-0320(19970201)27:2 · Cited by 39 · see citing works
Successful treatment of lupus nephritis in MRL-lpr/lpr mice by inhibiting ornithine decarboxylase
Gunnia, U. B., Amenta, P. S., Seibold, J. R., & Thomas, T. (1991) · Kidney International · doi:10.1038/ki.1991.111 · Cited by 28 · see citing works
Review of Autoimmune (Lupus-like) Glomerulonephritis in Murine Models
Hicks, J., & Bullard, D. C. (2006) · Ultrastructural Pathology · doi:10.1080/01913120600932677 · Cited by 15 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Macrophages in the Pathogenesis of Atherosclerosis
Moore, K. J., & Tabas, I. (2011) · Cell · doi:10.1016/j.cell.2011.04.005 · Cited by 2,669 · see citing works
Molecular Mechanisms That Influence the Macrophage M1–M2 Polarization Balance
Wang, N., Liang, H., & Zen, K. (2014) · Frontiers in Immunology · doi:10.3389/fimmu.2014.00614 · Cited by 1,997 · see citing works
Macrophage death and defective inflammation resolution in atherosclerosis
Tabas, I. (2010) · Nature Reviews Immunology · doi:10.1038/nri2675 · Cited by 1,120 · see citing works
Efferocytosis in health and disease
Doran, A. C., Yurdagul, A., & Tabas, I. (2020) · Nature Reviews Immunology · doi:10.1038/s41577-019-0240-6 · Cited by 1,066 · see citing works
Phagocytosis of apoptotic cells in homeostasis
Arandjelovic, S., & Ravichandran, K. S. (2015) · Nature Immunology · doi:10.1038/ni.3253 · Cited by 959 · see citing works
Commensal bacteria at the interface of host metabolism and the immune system
Brestoff, J. R., & Artis, D. (2013) · Nature Immunology · doi:10.1038/ni.2640 · Cited by 945 · see citing works
Varga, T., Czimmerer, Z., & Nagy, L. (2011) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2011.02.014 · Cited by 933 · see citing works
Type 2 Innate Signals Stimulate Fibro/Adipogenic Progenitors to Facilitate Muscle Regeneration
Heredia, J. E., Mukundan, L., Chen, F. M., Mueller, A. A., Deo, R. C., Locksley, R. M., Rando, T. A., & Chawla, A. (2013) · Cell · doi:10.1016/j.cell.2013.02.053 · Cited by 818 · see citing works
Self-citationMacrophage activation and its role in repair and pathology after spinal cord injury
Gensel, J. C., & Zhang, B. (2015) · Brain Research · doi:10.1016/j.brainres.2014.12.045 · Cited by 774 · see citing works
The role of Peroxisome Proliferator-Activated Receptors (PPAR) in immune responses
Christofides, A., Konstantinidou, E., Jani, C., & Boussiotis, V. (2020) · Metabolism: Clinical and Experimental · doi:10.1016/j.metabol.2020.154338 · Cited by 654 · see citing works
Zizzo, G., Hilliard, B. A., Monestier, M., & Cohen, P. L. (2012) · The Journal of Immunology · doi:10.4049/jimmunol.1200662 · Cited by 650 · see citing works
Alternative macrophage activation and metabolism
Odegaard, J. I., & Chawla, A. (2011) · Annual Review of Pathology: Mechanisms of Disease · doi:10.1146/annurev-pathol-011110-130138 · Cited by 640 · see citing works
Self-citationNuclear receptor transrepression pathways that regulate inflammation in macrophages and T cells
Glass, C. K., & Saijo, K. (2010) · Nature Reviews Immunology · doi:10.1038/nri2748 · Cited by 619 · see citing works
Neutrophils as protagonists and targets in chronic inflammation
Soehnlein, O., Steffens, S., Hidalgo, A., & Weber, C. (2017) · Nature reviews. Immunology · doi:10.1038/nri.2017.10 · Cited by 606 · see citing works
Diverse macrophage populations mediate acute lung inflammation and resolution
Aggarwal, N. R., King, L. S., & D’Alessio, F. R. (2014) · American Journal of Physiology-Lung Cellular and Molecular Physiology · doi:10.1152/ajplung.00341.2013 · Cited by 583 · see citing works
Clearance of apoptotic cells: implications in health and disease
Elliott, M. R., & Ravichandran, K. S. (2010) · The Journal of Cell Biology · doi:10.1083/jcb.201004096 · Cited by 547 · see citing works
Control of Macrophage Activation and Function by PPARs
Chawla, A. (2010) · Circulation Research · doi:10.1161/circresaha.110.216523 · Cited by 531 · see citing works
Self-citationTAM Receptor Signaling in Immune Homeostasis
Rothlin, C. V., Silva, E. A. C., Bosurgi, L., & Ghosh, S. (2015) · Annual Review of Immunology · doi:10.1146/annurev-immunol-032414-112103 · Cited by 516 · see citing works
Metabolism of tissue macrophages in homeostasis and pathology
Wculek, S. K., Dunphy, G., Heras-Murillo, I., Mastrangelo, A., & Sancho, D. (2022) · Cellular & Molecular Immunology · doi:10.1038/s41423-021-00791-9 · Cited by 501 · see citing works
Myers, K. V., Amend, S. R., & Pienta, K. J. (2019) · Molecular Cancer · doi:10.1186/s12943-019-1022-2 · Cited by 482 · see citing works
Dysregulation of germinal centres in autoimmune disease
Vinuesa, C. G., Sanz, I., & Cook, M. (2009) · Nature reviews. Immunology · doi:10.1038/nri2637 · Cited by 465 · see citing works
Efferocytosis Signaling in the Regulation of Macrophage Inflammatory Responses
Elliott, M. R., Koster, K. M., & Murphy, P. S. (2017) · The Journal of Immunology · doi:10.4049/jimmunol.1601520 · Cited by 440 · see citing works
Diversification of TAM receptor tyrosine kinase function
Zagórska, A., Través, P. G., Lew, E. D., Dransfield, I., & Lemke, G. (2014) · Nature Immunology · doi:10.1038/ni.2986 · Cited by 430 · see citing works
Cellular Metabolism and Macrophage Functional Polarization
Zhu, L., Zhao, Q., Yang, T., Ding, W., & Zhao, Y. X. (2014) · International Reviews of Immunology · doi:10.3109/08830185.2014.969421 · Cited by 428 · see citing works
Living on the Edge: Efferocytosis at the Interface of Homeostasis and Pathology
Morioka, S., Maueröder, C., & Ravichandran, K. S. (2019) · Immunity · doi:10.1016/j.immuni.2019.04.018 · Cited by 391 · see citing works
Mandrekar-Colucci, S., Karlo, J. C., & Landreth, G. E. (2012) · The Journal of Neuroscience · doi:10.1523/jneurosci.5268-11.2012 · Cited by 355 · see citing works
“Previous studies have demonstrated a role for PPARγ in polarizing macrophages to an alternative activation phenotype that is anti-inflammatory in nature and induces the phagocytic activity of cells (Mukundan et al., 2009; Chawla, 2010).”
BackgroundInfluentialNeutrophil clearance: when the party is over, clean-up begins
Bratton, D. L., & Henson, P. M. (2011) · Trends in Immunology · doi:10.1016/j.it.2011.04.009 · Cited by 350 · see citing works
Modulation of Macrophage Efferocytosis in Inflammation
Johnson, D. K., Frasch, S. C., Fernandez-Boyanapalli, R. F., Henson, P. M., & Bratton, D. L. (2011) · Frontiers in Immunology · doi:10.3389/fimmu.2011.00057 · Cited by 346 · see citing works
Macrophage functions in lean and obese adipose tissue
Thomas, D. D., & Apovian, C. M. (2017) · Metabolism · doi:10.1016/j.metabol.2017.04.005 · Cited by 318 · see citing works
The clearance of dying cells: table for two
Green, D. R., Oguin, T. H., & Martinez, J. (2016) · Cell Death & Differentiation · doi:10.1038/cdd.2015.172 · Cited by 314 · see citing works
DEL-1 promotes macrophage efferocytosis and clearance of inflammation
Kourtzelis, I., Li, X., Mitroulis, I., Grosser, D., Kajikawa, T., Wang, B., Grzybek, M., von Renesse, J., Czogalla, A., Troullinaki, M., et al. (2018) · Nature Immunology · doi:10.1038/s41590-018-0249-1 · Cited by 310 · see citing works
Phagocytosis of Apoptotic Cells in Resolution of Inflammation
Kourtzelis, I., Hajishengallis, G., & Chavakis, T. (2020) · Frontiers in Immunology · doi:10.3389/fimmu.2020.00553 · Cited by 301 · see citing works
van Diepen, J. A., Berbée, J. F. P., Havekes, L. M., & Rensen, P. C. N. (2013) · Atherosclerosis · doi:10.1016/j.atherosclerosis.2013.02.028 · Cited by 292 · see citing works
Phagocytosis imprints heterogeneity in tissue-resident macrophages
A-González, N., Quintana, J. A., Garcı́a-Silva, S., Mazariegos, M. S., de la Aleja, A. G., Nicolás-Ávila, J. Á., Walter, W., Adrover, J. M., Crainiciuc, G., Kuchroo, V. K., et al. (2017) · The Journal of Experimental Medicine · doi:10.1084/jem.20161375 · Cited by 282 · see citing works
LC3-Associated Phagocytosis and Inflammation
Heckmann, B. L., Boada-Romero, E., Cunha, L. D., Magne, J., & Green, D. R. (2017) · Journal of Molecular Biology · doi:10.1016/j.jmb.2017.08.012 · Cited by 276 · see citing works
LC3-associated phagocytosis at a glance
Heckmann, B. L., & Green, D. R. (2019) · Journal of Cell Science · doi:10.1242/jcs.222984 · Cited by 272 · see citing works
Apoptosis-induced mitochondrial dysfunction causes cytoplasmic lipid droplet formation
Boren, J., & Brindle, K. M. (2012) · Cell Death and Differentiation · doi:10.1038/cdd.2012.34 · Cited by 255 · see citing works
Erythropoeitin Signaling in Macrophages Promotes Dying Cell Clearance and Immune Tolerance
Luo, B., Gan, W., Liu, Z., Shen, Z., Wang, J., Shi, R., Liu, Y., Liu, Y., Jiang, M., Zhang, Z., et al. (2016) · Immunity · doi:10.1016/j.immuni.2016.01.002 · Cited by 229 · see citing works
Eisele, N. A., Ruby, T., Jacobson, A. R., Manzanillo, P. S., Cox, J. S., Lam, L. H., Mukundan, L., Chawla, A., & Monack, D. M. (2013) · Cell Host & Microbe · doi:10.1016/j.chom.2013.07.010 · Cited by 226 · see citing works
Self-citationThe Neutrophil’s Choice: Phagocytose vs Make Neutrophil Extracellular Traps
Manfredi, A. A., Ramirez, G. A., Rovere, P. Q., & Maugeri, N. (2018) · Frontiers in Immunology · doi:10.3389/fimmu.2018.00288 · Cited by 220 · see citing works
Diversity of Macrophages in Lung Homeostasis and Diseases
Hou, F., Xiao, K., Tang, L., & Xie, L. (2021) · Frontiers in Immunology · doi:10.3389/fimmu.2021.753940 · Cited by 216 · see citing works
Malainou, C., Abdin, S. M., Lachmann, N., Matt, U., & Herold, S. (2023) · Journal of Clinical Investigation · doi:10.1172/jci170501 · Cited by 210 · see citing works
Kidani, Y., & Bensinger, S. J. (2012) · Immunological Reviews · doi:10.1111/j.1600-065x.2012.01153.x · Cited by 204 · see citing works
Apoptotic Cell Death and Efferocytosis in Atherosclerosis
Vré, E. A. V., Ait‐Oufella, H., Tedgui, A., & Mallat, Z. (2012) · Arteriosclerosis Thrombosis and Vascular Biology · doi:10.1161/atvbaha.111.224873 · Cited by 200 · see citing works
Anti-inflammatory Mechanisms Triggered by Apoptotic Cells during Their Clearance
Szondy, Z., Sarang, Z., Kiss, B., Garabuczi, É., & Köröskényi, K. (2017) · Frontiers in Immunology · doi:10.3389/fimmu.2017.00909 · Cited by 195 · see citing works
Jones, D., Boudes, P. F., Swain, M. G., Bowlus, C. L., Galambos, M. R., Bacon, B. R., Doerffel, Y., Gitlin, N., Gordon, S. C., Odin, J. A., et al. (2017) · The Lancet Gastroenterology & Hepatology · doi:10.1016/s2468-1253(17)30246-7 · Cited by 191 · see citing works
Wagner, K., & Wagner, N. (2009) · Pharmacology & Therapeutics · doi:10.1016/j.pharmthera.2009.12.001 · Cited by 191 · see citing works
Liu, Y., Colby, J. K., Zuo, X., Jaoude, J. C., Wei, D., & Shureiqi, I. (2018) · International Journal of Molecular Sciences · doi:10.3390/ijms19113339 · Cited by 186 · see citing works
Connecting Type 1 and Type 2 Diabetes through Innate ImmunityPreprint
Odegaard, J. I., & Chawla, A. (2012) · Cold Spring Harbor Perspectives in Medicine · doi:10.1101/cshperspect.a007724 · Cited by 185 · see citing works
Self-citationEngulfment signals and the phagocytic machinery for apoptotic cell clearance
Park, S., & Kim, I. (2017) · Experimental & Molecular Medicine · doi:10.1038/emm.2017.52 · Cited by 189 · see citing works
Ariel, A., & Serhan, C. N. (2012) · Frontiers in Immunology · doi:10.3389/fimmu.2012.00004 · Cited by 184 · see citing works
Macrophages clean up: efferocytosis and microbial control
Martin, C. J., Peters, K. N., & Behar, S. M. (2013) · Current Opinion in Microbiology · doi:10.1016/j.mib.2013.10.007 · Cited by 177 · see citing works
Zhang, W., Xu, W., & Xiong, S. (2010) · The Journal of Immunology · doi:10.4049/jimmunol.0904016 · Cited by 177 · see citing works
Rőszer, T., Menéndez-Gutierrez, M. P., Lefterova, M. I., Alameda, D., Núñez, V., Lazar, M. A., Fischer, T., & Ricote, M. (2010) · The Journal of Immunology · doi:10.4049/jimmunol.1002230 · Cited by 176 · see citing works
Programmed Necrosis and Disease:We interrupt your regular programming to bring you necroinflammation
Kim, E. H., Wong, S., & Martinez, J. (2018) · Cell Death and Differentiation · doi:10.1038/s41418-018-0179-3 · Cited by 176 · see citing works
Dendritic cell maturation in cancer
Moon, C. Y., Belabed, M., Park, M. D., Mattiuz, R., Puleston, D. J., & Mérad, M. (2025) · Nature reviews. Cancer · doi:10.1038/s41568-024-00787-3 · Cited by 186 · see citing works
Savage, J. C., Jay, T., Goduni, E., Quigley, C., Mariani, M. M., Malm, T., Ransohoff, R. M., Lamb, B. T., & Landreth, G. E. (2015) · The Journal of Neuroscience · doi:10.1523/jneurosci.4586-14.2015 · Cited by 154 · see citing works
“Importantly, the expression of MerTK, Axl (Mukundan et al., 2009; A-Gonzalez et al., 2009), and TREM2 (Daniel et al., 2014) is directly regulated by nuclear receptor agonists.”
BackgroundInfluentialAziz, M., Jacob, A., Matsuda, A., & Wang, P. (2011) · APOPTOSIS · doi:10.1007/s10495-011-0630-0 · Cited by 163 · see citing works
The PPAR-RXR Transcriptional Complex in the Vasculature
Plutzky, J. (2011) · Circulation Research · doi:10.1161/circresaha.110.226860 · Cited by 161 · see citing works
Macrophage Proinflammatory Activation and Deactivation
Valledor, A. F., Comalada, M., Santamaria‐Babí, L. F., Lloberas, J., & Celada, A. (2010) · Advances in immunology · doi:10.1016/b978-0-12-380995-7.00001-x · Cited by 159 · see citing works
Efferocytosis in the tumor microenvironment
Werfel, T. A., & Cook, R. S. (2018) · Seminars in Immunopathology · doi:10.1007/s00281-018-0698-5 · Cited by 156 · see citing works
The physiology of foamy phagocytes in multiple sclerosis
Grajchen, E., Hendriks, J. J. A., & Bogie, J. F. J. (2018) · Acta Neuropathologica Communications · doi:10.1186/s40478-018-0628-8 · Cited by 147 · see citing works
Macrophages, Meta-Inflammation, and Immuno-Metabolism
Shapiro, H., Lutaty, A., & Ariel, A. (2011) · The Scientific World JOURNAL · doi:10.1100/2011/397971 · Cited by 145 · see citing works
Yoon, Y.-S., Kim, S.-Y., Kim, M.-J., Lim, J.-H., Cho, M.-S., & Kang, J. L. (2015) · Mucosal Immunology · doi:10.1038/mi.2014.130 · Cited by 145 · see citing works
Zhang, W., Xu, W., & Xiong, S. (2011) · The Journal of Immunology · doi:10.4049/jimmunol.1002315 · Cited by 145 · see citing works
Metabolic Connections during Apoptotic Cell Engulfment
Han, C. Z., & Ravichandran, K. S. (2011) · Cell · doi:10.1016/j.cell.2011.12.006 · Cited by 144 · see citing works
Macrophage metabolism in atherosclerosis
Bories, G. F. P., & Leitinger, N. (2017) · FEBS Letters · doi:10.1002/1873-3468.12786 · Cited by 145 · see citing works
Liver X receptors as regulators of macrophage inflammatory and metabolic pathways
A-González, N., & Castrillo, A. (2011) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2010.12.015 · Cited by 139 · see citing works
Retinoid X receptors in macrophage biology
Rőszer, T., Menéndez-Gutiérrez, M. P., Cedenilla, M., & Ricote, M. (2013) · Trends in Endocrinology & Metabolism · doi:10.1016/j.tem.2013.04.004 · Cited by 137 · see citing works
Adipose tissue macrophage in obesity-associated metabolic diseases
Yao, J., Wu, D., & Qiu, Y. (2022) · Frontiers in Immunology · doi:10.3389/fimmu.2022.977485 · Cited by 143 · see citing works
Efferocytosis in atherosclerotic lesions: Malfunctioning regulatory pathways and control mechanisms
Tajbakhsh, A., Rezaee, M., Kovanen, P. T., & Sahebkar, A. (2018) · Pharmacology & Therapeutics · doi:10.1016/j.pharmthera.2018.02.003 · Cited by 134 · see citing works
Control of tumor-associated macrophage responses by nutrient acquisition and metabolism
Zhang, X., Ji, L., & Li, M. O. (2023) · Immunity · doi:10.1016/j.immuni.2022.12.003 · Cited by 134 · see citing works
Cunin, P., Beauvillain, C., Miot, C., Augusto, J., Preisser, L., Blanchard, S., Pignon, P., Scotet, M., Garo, E., Frémaux, I., et al. (2016) · Cell Death and Disease · doi:10.1038/cddis.2016.113 · Cited by 132 · see citing works
Programmed Cell Death and Inflammation: Winter Is Coming
Kolb, J. P., Oguin, T. H., Oberst, A., & Martinez, J. (2017) · Trends in Immunology · doi:10.1016/j.it.2017.06.009 · Cited by 131 · see citing works
Efferocytosis and Lung Disease
McCubbrey, A. L., & Curtis, J. L. (2013) · CHEST Journal · doi:10.1378/chest.12-2413 · Cited by 130 · see citing works
Nuclear receptors as therapeutic targets for Alzheimer's disease
Mandrekar-Colucci, S., & Landreth, G. E. (2011) · Expert Opinion on Therapeutic Targets · doi:10.1517/14728222.2011.594043 · Cited by 126 · see citing works
PPAR Beta/Delta and the Hallmarks of Cancer
Wagner, N., & Wagner, K. (2020) · Cells · doi:10.3390/cells9051133 · Cited by 126 · see citing works
Singer, K., Maley, N., Mergian, T. A., DelProposto, J. L., Cho, K. W., Zamarron, B. F., Martinez-Santibañez, G., Geletka, L. M., Muir, L. A., Wachowiak, P., et al. (2015) · Journal of Biological Chemistry · doi:10.1074/jbc.m114.634568 · Cited by 124 · see citing works
Impaired Clearance of Apoptotic Cells in Chronic Inflammatory Diseases: Therapeutic Implications
Szondy, Z., Garabuczi, Ã., Joós, G., Tsay, G. J., & Sarang, Z. (2014) · Frontiers in Immunology · doi:10.3389/fimmu.2014.00354 · Cited by 124 · see citing works
The Role of Efferocytosis in Autoimmune Diseases
Abdolmaleki, F., Farahani, N., Hayat, S. M. G., Pirro, M., Bianconi, V., Barreto, G. E., & Sahebkar, A. (2018) · Frontiers in Immunology · doi:10.3389/fimmu.2018.01645 · Cited by 125 · see citing works
Apoptotic Cells Induced Signaling for Immune Homeostasis in Macrophages and Dendritic Cells
Trahtemberg, U., & Mevorach, D. (2017) · Frontiers in Immunology · doi:10.3389/fimmu.2017.01356 · Cited by 119 · see citing works
Neutrophil–macrophage cooperation and its impact on tissue repair
Bouchery, T., & Harris, N. L. (2019) · Immunology and Cell Biology · doi:10.1111/imcb.12241 · Cited by 119 · see citing works
Current and potential treatments for primary biliary cholangitis
Shah, R. A., & Kowdley, K. V. (2019) · The Lancet. Gastroenterology & hepatology · doi:10.1016/s2468-1253(19)30343-7 · Cited by 115 · see citing works
Frisdal, É., Lesnik, P., Olivier, M., Robillard, P., Chapman, M. J., Huby, T., Guérin, M., & Goff, W. L. (2011) · Journal of Biological Chemistry · doi:10.1074/jbc.m111.264325 · Cited by 114 · see citing works
Gardai, S. J., Mao, W., Schüle, B., Babcock, M., Schoebel, S., Lorenzana, C., Alexander, J., Kim, S., Glick, H., Hilton, K., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0071634 · Cited by 107 · see citing works
C1q and phagocytosis: the perfect complement to a good meal
Galvan, M. D., Greenlee‐Wacker, M. C., & Bohlson, S. S. (2012) · Journal of Leukocyte Biology · doi:10.1189/jlb.0212099 · Cited by 105 · see citing works
From tumor cell metabolism to tumor immune escape
Villalba, M., Rathore, M. G., López-Royuela, N., Krzywińska, E., Garaude, J., & Allende-Vega, N. (2012) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2012.04.024 · Cited by 106 · see citing works
Lindau, D., Mussard, J., Rabsteyn, A., Ribon, M., Kötter, I., Igney-Oertel, A., Adema, G. J., Boissier, M., Rammensee, H., & Decker, P. (2013) · Annals of the Rheumatic Diseases · doi:10.1136/annrheumdis-2012-203041 · Cited by 106 · see citing works
PPARβ/δ: A Key Therapeutic Target in Metabolic Disorders
Palomer, X., Barroso, E., Pizarro‐Delgado, J., Peña, L., Botteri, G., Zarei, M., Aguilar-Recarte, D., Montori-Grau, M., & Vázquez‐Carrera, M. (2018) · International Journal of Molecular Sciences · doi:10.3390/ijms19030913 · Cited by 105 · see citing works
Reed-Geaghan, E. G., Reed, Q. W., Cramer, P. E., & Landreth, G. E. (2010) · Journal of Neuroscience · doi:10.1523/jneurosci.2637-10.2010 · Cited by 104 · see citing works
Myelin alters the inflammatory phenotype of macrophages by activating PPARs
Bogie, J. F. J., Jorissen, W., Mailleux, J., Nijland, P. G., Zelcer, N., Vanmierlo, T., van Horssen, J., Stinissen, P., Hellings, N., & Hendriks, J. J. A. (2013) · Acta Neuropathologica Communications · doi:10.1186/2051-5960-1-43 · Cited by 99 · see citing works
Nuclear receptors in neurodegenerative diseases
Skerrett, R., Malm, T., & Landreth, G. (2014) · Neurobiology of Disease · doi:10.1016/j.nbd.2014.05.019 · Cited by 94 · see citing works
The contribution of macrophages to systemic lupus erythematosus
Ma, C., Xia, Y., Yang, Q., & Zhao, Y. (2019) · Clinical Immunology · doi:10.1016/j.clim.2019.06.009 · Cited by 93 · see citing works
Park, J., Lee, S. E., Hur, J., Hong, E. B., Choi, J.-I., Yang, J.-M., Kim, J., Kim, Y. C., Cho, H., Peters, J. M., et al. (2015) · Cell Reports · doi:10.1016/j.celrep.2015.02.024 · Cited by 93 · see citing works
Cellular Responses to the Efferocytosis of Apoptotic Cells
Yin, C., & Heit, B. (2021) · Frontiers in Immunology · doi:10.3389/fimmu.2021.631714 · Cited by 92 · see citing works
PPAR Agonists as Therapeutics for CNS Trauma and Neurological Diseases
Mandrekar-Colucci, S., Sauerbeck, A. D., Popovich, P. G., & McTigue, D. M. (2013) · ASN NEURO · doi:10.1042/an20130030 · Cited by 91 · see citing works
Hanging in the balance: endogenous anti‐inflammatory mechanisms in tissue repair and fibrosis
Ariel, A., & Zeituni-Timor, O. (2012) · The Journal of Pathology · doi:10.1002/path.4108 · Cited by 91 · see citing works
MafB is a critical regulator of complement component C1q
Tran, M. T., Hamada, M., Jeon, H., Shiraishi, R., Asano, K., Hattori, M., Nakamura, M., Imamura, Y., Tsunakawa, Y., Fujii, R., et al. (2017) · Nature Communications · doi:10.1038/s41467-017-01711-0 · Cited by 89 · see citing works
The Nuclear Receptor Nr4a1 Mediates Anti-Inflammatory Effects of Apoptotic Cells
Ipseiz, N., Uderhardt, S., Scholtysek, C., Steffen, M., Schabbauer, G., Bözec, A., Schett, G. A., & Krönke, G. (2014) · The Journal of Immunology · doi:10.4049/jimmunol.1303377 · Cited by 87 · see citing works
Peroxisome proliferator-activated receptor δ
Bojic, L. A., & Huff, M. W. (2013) · Current Opinion in Lipidology · doi:10.1097/mol.0b013e32835cc949 · Cited by 87 · see citing works
- Authors
- Mukundan, L., Odegaard, J. I., Morel, C. R., Heredia, J. E., Mwangi, J. W., Ricardo-Gonzalez, R. R., Goh, Y. P. S., Eagle, A. R., Dunn, S. E., Awakuni, J. U. H., Nguyen, K. D., Steinman, L., Michie, S. A., & Chawla, A.
- Affiliations
- Stanford Medicine (US)
- Baylor University (US)
- Corresponding author
- Chawla, Ajay
- Venue
- Nature Medicine
- Published
- 2009-10-18
- Volume
- 15
- Issue
- 11
- Pages
- 1266-1272
- ISSN
- 1078-8956 (ISSN-L)
- 1546-170X
- PMC
- PMC2783696
- OpenAlex
- W2116505573
- Cited by
- 368
- References
- 45
- Citations by year
- 2026: 9 · 2025: 23 · 2024: 14 · 2023: 19 · 2022: 22 · 2021: 23 · 2020: 23 · 2019: 18 · 2018: 14 · 2017: 33 · 2016: 15 · 2015: 18 · 2014: 23 · 2013: 31 · 2012: 27
- FWCI
- 11.94
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature Medicine (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- Howard Hughes Medical Institute
- National Heart, Lung, and Blood Institute (HL076746, R01HL076746)
- National Institute of Allergy and Infectious Diseases (F31AI066402, AI066402, T32AI007290)
- National Institute of Diabetes and Digestive and Kidney Diseases (DK67592, DK081405, R01DK081405, DK062386, R01DK067592, K08DK062386, R01DK076760)
- National Institute of Dental and Craniofacial Research (R01DE014385, DE14385)
- Topics
- Life Sciences › Immunology and Microbiology › Immunology › Phagocytosis and Immune Regulation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Peroxisome Proliferator-Activated Receptors
- Health Sciences › Medicine › Rheumatology › Systemic Lupus Erythematosus Research
- Keywords
- PPARδ, efferocytosis, macrophages, opsonins, C1q, autoimmunity, systemic lupus erythematosus, autoimmune kidney disease, autoantibodies, anti-inflammatory cytokines, self-tolerance, fatty acid sensing, transcriptional regulation
- MeSH terms
- Animals, Autoantibodies, Autoimmune Diseases, Cells, Cultured, Disease Models, Animal, Enzyme-Linked Immunosorbent Assay, Female, Fluoresceins, Gene Expression Regulation, Humans, Immune Tolerance, Macrophages, Mice, Inbred BALB C, Opsonin Proteins, Phagocytosis, Phenols, Promoter Regions, Genetic, RNA, Messenger, Sulfhydryl Compounds, Thiazoles, Thymus Gland, Time Factors, Autoimmunity, Cytokines, Apoptosis, Mice, Knockout, Hyaluronan Receptors, Mitochondrial Proteins, CD11b Antigen, PPAR delta, Mice
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review