Metabolomics: beyond biomarkers and towards mechanisms

KEGG: Kyoto Encyclopedia of Genes and Genomes

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Gut flora metabolism of phosphatidylcholine promotes cardiovascular disease

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Intestinal microbiota metabolism of l-carnitine, a nutrient in red meat, promotes atherosclerosis

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Commensal <i>Bifidobacterium</i> promotes antitumor immunity and facilitates anti–PD-L1 efficacy

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MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

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Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice

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Anticancer immunotherapy by CTLA-4 blockade relies on the gut microbiota

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Intestinal microbial metabolism of phosphatidylcholine and cardiovascular risk

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Microbiota Modulate Behavioral and Physiological Abnormalities Associated with Neurodevelopmental Disorders

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HMDB: the Human Metabolome Database

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Protein and polymer analyses up to m/z 100 000 by laser ionization time-of-flight mass spectrometry

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Ischaemic accumulation of succinate controls reperfusion injury through mitochondrial ROS

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HMDB 3.0—The Human Metabolome Database in 2013

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The gut microbiota, bacterial metabolites and colorectal cancer

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MassBank: a public repository for sharing mass spectral data for life sciences

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ATP-citrate lyase links cellular metabolism to histone acetylation

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MetaboAnalyst: a web server for metabolomic data analysis and interpretation

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Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression

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METLIN—a metabolite mass spectral database

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An atlas of genetic influences on human blood metabolites

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The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control

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GMD@CSB.DB: the Golm Metabolome Database

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XCMS Online: A Web-Based Platform to Process Untargeted Metabolomic Data

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Non-lethal Inhibition of Gut Microbial Trimethylamine Production for the Treatment of Atherosclerosis

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Quantitative flux analysis reveals folate-dependent NADPH production

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A community-driven global reconstruction of human metabolism

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Intracellular α-ketoglutarate maintains the pluripotency of embryonic stem cells

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Fat, fibre and cancer risk in African Americans and rural Africans

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Predicting Network Activity from High Throughput Metabolomics

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MSEA: a web-based tool to identify biologically meaningful patterns in quantitative metabolomic data

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Microbiota organization is a distinct feature of proximal colorectal cancers

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In silico fragmentation for computer assisted identification of metabolite mass spectra

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Tissue Imaging at Atmospheric Pressure Using Desorption Electrospray Ionization (DESI) Mass Spectrometry

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A roadmap for interpreting 13C metabolite labeling patterns from cells

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Expansion of the BioCyc collection of pathway/genome databases to 160 genomes

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Mass spectral databases for LC/MS- and GC/MS-based metabolomics: State of the field and future prospects

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The food metabolome: a window over dietary exposure

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Metabolic oxidation regulates embryonic stem cell differentiation

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Pyruvate carboxylase is critical for non–small-cell lung cancer proliferation

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Clathrate nanostructures for mass spectrometry

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NNMT promotes epigenetic remodeling in cancer by creating a metabolic methylation sink

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The metabolome regulates the epigenetic landscape during naive-to-primed human embryonic stem cell transition

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Dynamic programming of CD8+ T lymphocyte responses

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Interactive XCMS Online: Simplifying Advanced Metabolomic Data Processing and Subsequent Statistical Analyses

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Adaptation of the human aryl hydrocarbon receptor to sense microbiota-derived indoles

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Regulation of T Lymphocyte Metabolism

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SHMT2 drives glioma cell survival in ischaemia but imposes a dependence on glycine clearance

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Understanding metabolic regulation and its influence on cell physiology

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Metabolism Links Bacterial Biofilms and Colon Carcinogenesis

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Unbound free fatty acid levels in human serum.

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Ion Mobility Derived Collision Cross Sections to Support Metabolomics Applications

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Defining the Metabolome: Size, Flux, and Regulation

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Challenges and Opportunities of Metabolomics

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Phase Separation of Lipid Membranes Analyzed with High-Resolution Secondary Ion Mass Spectrometry

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Xenobiotic Metabolomics: Major Impact on the Metabolome

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Multilayered Genetic and Omics Dissection of Mitochondrial Activity in a Mouse Reference Population

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Extensive In Vivo Metabolite-Protein Interactions Revealed by Large-Scale Systematic Analyses

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MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks

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Noninvasive Urinary Metabolomic Profiling Identifies Diagnostic and Prognostic Markers in Lung Cancer

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COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access

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MetFusion: integration of compound identification strategies

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Glycine and a Glycine Dehydrogenase (GLDC) SNP as Citalopram/Escitalopram Response Biomarkers in Depression: Pharmacometabolomics-Informed Pharmacogenomics

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X13CMS: Global Tracking of Isotopic Labels in Untargeted Metabolomics

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The Furan Fatty Acid Metabolite CMPF Is Elevated in Diabetes and Induces β Cell Dysfunction

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Data standards can boost metabolomics research, and if there is a will, there is a way

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Updates in metabolomics tools and resources: 2014–2015

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Metabolic profiling detects early effects of environmental and lifestyle exposure to cadmium in a human population

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Bioinformatics: The Next Frontier of Metabolomics

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The Expanding Role of Mass Spectrometry in Biotechnology

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A study of antimetabolites

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Automatic Chemical Structure Annotation of an LC–MSn Based Metabolic Profile from Green Tea

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Stable Isotope-Assisted Metabolomics for Network-Wide Metabolic Pathway Elucidation

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Probing the Metabolic Network in Bloodstream-Form Trypanosoma brucei Using Untargeted Metabolomics with Stable Isotope Labelled Glucose

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Global metabolomics reveals metabolic dysregulation in ischemic retinopathy

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Inhibition of the mevalonate pathway affects epigenetic regulation in cancer cells

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Diacetylspermine Is a Novel Prediagnostic Serum Biomarker for Non–Small-Cell Lung Cancer and Has Additive Performance With Pro-Surfactant Protein B

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Radiation Metabolomics. 4. UPLC-ESI-QTOFMS-Based Metabolomics for Urinary Biomarker Discovery in Gamma-Irradiated Rats

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Radiation Metabolomics. 5. Identification of Urinary Biomarkers of Ionizing Radiation Exposure in Nonhuman Primates by Mass Spectrometry-Based Metabolomics

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Interaction between dietary lipids and gut microbiota regulates hepatic cholesterol metabolism

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A novel stable isotope labelling assisted workflow for improved untargeted LC–HRMS based metabolomics research

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geoRge: A Computational Tool To Detect the Presence of Stable Isotope Labeling in LC/MS-Based Untargeted Metabolomics

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Targeting T Cell Immunometabolism for Cancer Immunotherapy; Understanding the Impact of the Tumor Microenvironment

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Arteriovenous Blood Metabolomics: A Readout of Intra-Tissue Metabostasis

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