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The WASH complex, an endosomal Arp2/3 activator, interacts with the Hermansky–Pudlak syndrome complex BLOC-1 and its cargo phosphatidylinositol-4-kinase type IIα

Ryder, P. V., Vistein, R., Gokhale, A., Seaman, M. N., Puthenveedu, M. A., Faundez, V.·2013·Molecular Biology of the Cell

Abstract

Vesicle biogenesis machinery components such as coat proteins can interact with the actin cytoskeleton for cargo sorting into multiple pathways. It is unknown, however, whether these interactions are a general requirement for the diverse endosome traffic routes. In this study, we identify actin cytoskeleton regulators as previously unrecognized interactors of complexes associated with the Hermansky–Pudlak syndrome. Two complexes mutated in the Hermansky–Pudlak syndrome, adaptor protein complex-3 and biogenesis of lysosome-related organelles complex-1 (BLOC-1), interact with and are regulated by the lipid kinase phosphatidylinositol-4-kinase type IIα (PI4KIIα). We therefore hypothesized that PI4KIIα interacts with novel regulators of these complexes. To test this hypothesis, we immunoaffinity purified PI4KIIα from isotope-labeled cell lysates to quantitatively identify interactors. Strikingly, PI4KIIα isolation preferentially coenriched proteins that regulate the actin cytoskeleton, including guanine exchange factors for Rho family GTPases such as RhoGEF1 and several subunits of the WASH complex. We biochemically confirmed several of these PI4KIIα interactions. Of importance, BLOC-1 complex, WASH complex, RhoGEF1, or PI4KIIα depletions altered the content and/or subcellular distribution of the BLOC-1–sensitive cargoes PI4KIIα, ATP7A, and VAMP7. We conclude that the Hermansky–Pudlak syndrome complex BLOC-1 and its cargo PI4KIIα interact with regulators of the actin cytoskeleton.

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  • WASH is recruited to endosomes where it is necessary for branched F-actin deposition, a process essential to maintain endolysosomal network structure, promote fission of membrane tubules, and traffic cargo proteins.

    “WASH is recruited to endosomes where it is necessary for branched F-actin deposition, a process that is essential to maintain the structure of the endolysosomal network, to promote effective fission of membrane tubules and trafficking of cargo proteins37,39,41,43,44.”

    From Endosomal PI(3)P regulation by the COMMD/CCDC22/CCDC93 (CCC) complex controls membrane protein recycling (2019) · cites this paper as [44]

    The Results and Discussion (page unavailable) place WASH and actin on early endosomes and report elongated endosomal tubules and cargo missorting after WASH depletion. The paper supports a role in endosomal morphology and cargo trafficking, but describes WASH-driven membrane scission as a hypothesis awaiting testing; it does not establish that this process is essential to maintain the structure of the endolysosomal network. (LLM, conf=0.87)

    Experimental — accuracy not yet measured
  • Regulation of branched F-actin formation by WASH is needed for proper morphology of the endolysosomal system and endosomal trafficking of a broad range of cargoes.

    “Regulation of branched F-actin formation by WASH is needed for proper morphology of the endolysosomal system and endosomal trafficking of a broad range of cargoes37,39,41–44”

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Research works printed but not linked: 94

  1. Aittaleb M, 2010, Mol Pharmacol, 77, 111, 10.1124/mol.109.061234 · DOI
  2. Anitei M, 2012, Nat Cell Biol, 14, 11, 10.1038/ncb2409 · DOI
  3. Balla A, 2002, J Biol Chem, 277, 20041, 10.1074/jbc.M111807200 · DOI
  4. Barylko B, 2002, J Biol Chem, 277, 44366, 10.1074/jbc.M203241200 · DOI
  5. 10.1091/mbc.e08-02-0110 · DOI
  6. Bear JE, 2009, Dev Cell, 17, 583, 10.1016/j.devcel.2009.10.019 · DOI
  7. Birkenfeld J, 2008, Trends Cell Biol, 18, 210, 10.1016/j.tcb.2008.02.006 · DOI · Paper page
  8. Blackstone C, 2012, Annu Rev Neurosci, 35, 25, 10.1146/annurev-neuro-062111-150400 · DOI
  9. Blasius AL, 2009, Proc Natl Acad Sci USA, 106, 2706, 10.1073/pnas.0813208106 · DOI
  10. Bonifacino JS, 2004, Cell, 116, 153, 10.1016/S0092-8674(03)01079-1 · DOI
  11. Brocker C, 2010, Curr Biol, 20, R943, 10.1016/j.cub.2010.09.015 · DOI
  12. Bultema JJ, 2013, Small GTPases, 4, 16, 10.4161/sgtp.22349 · DOI
  13. Campellone KG, 2010, Mol Cell Biol, 11, 237
  14. Carnell M, 2011, J Cell Biol, 193, 831, 10.1083/jcb.201009119 · DOI · Paper page
  15. Clemen CS, 2010, Brain, 133, 2920, 10.1093/brain/awq222 · DOI · Paper page
  16. Clift-O'Grady L, 1998, Methods, 16, 150, 10.1006/meth.1998.0662 · DOI
  17. Conner SD, 2003, Nature, 422, 37, 10.1038/nature01451 · DOI
  18. 10.1091/mbc.e07-12-1239 · DOI
  19. Delevoye C, 2009, J Cell Biol, 187, 247, 10.1083/jcb.200907122 · DOI
  20. Dell'Angelica EC, 2009, Curr Opin Cell Biol, 21, 552, 10.1016/j.ceb.2009.04.014 · DOI
  21. Dell'Angelica EC, 1999, Mol Cell, 3, 11, 10.1016/S1097-2765(00)80170-7 · DOI
  22. Dennis G, 2003, Genome Biol, 4, P3, 10.1186/gb-2003-4-5-p3 · DOI · Paper page
  23. Derivery E, 2009, Dev Cell, 17, 712, 10.1016/j.devcel.2009.09.010 · DOI · Paper page
  24. 10.1091/mbc.e06-05-0379 · DOI
  25. Duleh SN, 2010, Cytoskeleton (Hoboken), 67, 193, 10.1002/cm.20437 · DOI · Paper page
  26. Duleh SN, 2012, Cytoskeleton (Hoboken), 69, 1047, 10.1002/cm.21069 · DOI · Paper page
  27. Ferguson SM, 2012, Nat Rev Mol Cell Biol, 13, 75, 10.1038/nrm3266 · DOI
  28. Finsterer J, 2012, J Neurol Sci, 318, 1, 10.1016/j.jns.2012.03.025 · DOI
  29. Gao Y, 2012, Science, 337, 1340, 10.1126/science.1224492 · DOI
  30. Gokhale A, 2012, J Neurosci, 32, 3697, 10.1523/JNEUROSCI.5640-11.2012 · DOI · Paper page
  31. Gokhale A, 2012, Cell Logist, 2, 1, 10.4161/cl.22717 · DOI
  32. Gomez TS, 2009, Dev Cell, 17, 699, 10.1016/j.devcel.2009.09.009 · DOI · Paper page
  33. 10.1091/mbc.e12-02-0101 · DOI · Paper page
  34. Guo J, 2003, Proc Natl Acad Sci USA, 100, 3995, 10.1073/pnas.0230488100 · DOI
  35. Hao YH, 2013, Cell, 152, 1051, 10.1016/j.cell.2013.01.051 · DOI
  36. Harbour ME, 2010, J Cell Sci, 123, 3703, 10.1242/jcs.071472 · DOI · Paper page
  37. Harbour ME, 2012, Biochem J, 442, 209, 10.1042/BJ20111761 · DOI · Paper page
  38. Helfer E, 2013, Biol Cell, 105, 191, 10.1111/boc.201200038 · DOI
  39. Huang da W, 2007, Nucleic Acids Res, 35, W169, 10.1093/nar/gkm415 · DOI
  40. Huizing M, 2008, Annu Rev Genomics Hum Genet, 9, 359, 10.1146/annurev.genom.9.081307.164303 · DOI
  41. 10.1091/mbc.e11-12-1059 · DOI · Paper page
  42. Jia D, 2010, Proc Natl Acad Sci USA, 107, 10442, 10.1073/pnas.0913293107 · DOI · Paper page
  43. Kaksonen M, 2000, J Cell Sci, 113, 4421, 10.1242/jcs.113.24.4421 · DOI
  44. Kaksonen M, 2006, Nat Rev Mol Cell Biol, 7, 404, 10.1038/nrm1940 · DOI · Paper page
  45. Kantheti P, 2003, Mamm Genome, 14, 157, 10.1007/s00335-002-2238-8 · DOI
  46. Kennerson ML, 2010, Am J Hum Genet, 86, 343, 10.1016/j.ajhg.2010.01.027 · DOI
  47. 10.1091/mbc.e11-07-0592 · DOI
  48. Li W, 2003, Nat Genet, 35, 84, 10.1038/ng1229 · DOI
  49. Lichtenstein Y, 1998, Proc Natl Acad Sci USA, 95, 11223, 10.1073/pnas.95.19.11223 · DOI
  50. Liu R, 2009, Development, 136, 2849, 10.1242/dev.035246 · DOI
  51. Lomant AJ, 1976, J Mol Biol, 104, 243, 10.1016/0022-2836(76)90011-5 · DOI
  52. Mann M, 2006, Mol Cell Biol, 7, 952
  53. McMahon HT, 2011, Mol Cell Biol, 12, 517
  54. Minogue S, 2006, J Cell Sci, 119, 571, 10.1242/jcs.02752 · DOI
  55. Monfregola J, 2010, J Biol Chem, 285, 16951, 10.1074/jbc.M109.078501 · DOI
  56. Mooren OL, 2012, Annu Rev Biochem, 81, 661, 10.1146/annurev-biochem-060910-094416 · DOI · Paper page
  57. Mossinger J, 2012, EMBO Rep, 13, 1087, 10.1038/embor.2012.164 · DOI
  58. Nakagawa T, 2000, Cell, 103, 569, 10.1016/S0092-8674(00)00161-6 · DOI
  59. Newell-Litwa K, 2010, J Neurosci, 30, 820, 10.1523/JNEUROSCI.3400-09.2010 · DOI
  60. 10.1091/mbc.e08-05-0456 · DOI
  61. Newell-Litwa K, 2007, J Cell Sci, 120, 531, 10.1242/jcs.03365 · DOI
  62. Ong SE, 2002, Mol Cell Proteom, 1, 376, 10.1074/mcp.M200025-MCP200 · DOI · Paper page
  63. Ong SE, 2006, Nat Protoc, 1, 2650, 10.1038/nprot.2006.427 · DOI
  64. Peden AA, 2002, J Cell Biol, 156, 327, 10.1083/jcb.200107140 · DOI
  65. Perez-Cornejo P, 2012, Proc Natl Acad Sci USA, 109, 10376, 10.1073/pnas.1200174109 · DOI
  66. Piotrowski JT, 2013, Mol Cell Biol, 33, 958, 10.1128/MCB.01288-12 · DOI · Paper page
  67. Puthenveedu MA, 2010, Cell, 143, 761, 10.1016/j.cell.2010.10.003 · DOI · Paper page
  68. Qualmann B, 2000, J Cell Biol, 150, F111, 10.1083/jcb.150.5.F111 · DOI
  69. Raposo G, 2007, Mol Cell Biol, 8, 786
  70. Riedl J, 2008, Nat Methods, 5, 605, 10.1038/nmeth.1220 · DOI · Paper page
  71. Rossman KL, 2005, Nat Rev Mol Cell Biol, 6, 167, 10.1038/nrm1587 · DOI · Paper page
  72. Rottner K, 2010, Trends Cell Biol, 20, 650, 10.1016/j.tcb.2010.08.014 · DOI
  73. Rotty JD, 2012, Nat Rev Mol Cell Biol, 14, 7, 10.1038/nrm3492 · DOI · Paper page
  74. 10.1091/mbc.e06-02-0103 · DOI
  75. Salazar G, 2009, J Biol Chem, 284, 1790, 10.1074/jbc.M805991200 · DOI
  76. Schmid EM, 2007, Nature, 448, 883, 10.1038/nature06031 · DOI · Paper page
  77. Schmid SL, 2011, Annu Rev Cell Dev Biol, 27, 79, 10.1146/annurev-cellbio-100109-104016 · DOI
  78. Seaman MN, 2012, J Cell Sci, 125, 4693, 10.1242/jcs.103440 · DOI · Paper page
  79. Setty SR, 2008, Nature, 454, 1142, 10.1038/nature07163 · DOI
  80. 10.1091/mbc.e06-12-1066 · DOI
  81. Simons JP, 2009, Proc Natl Acad Sci USA, 106, 11535, 10.1073/pnas.0903011106 · DOI
  82. Starcevic M, 2004, J Biol Chem, 279, 28393, 10.1074/jbc.M402513200 · DOI
  83. 10.1091/mbc.e04-03-0272 · DOI
  84. Swedlow JR, 2002, Proc Natl Acad Sci USA, 99, 2014, 10.1073/pnas.022554999 · DOI
  85. Swedlow JR, 1997, Deconvolution of Images and Spectra, 284
  86. Trinkle-Mulcahy L, 2008, J Cell Biol, 183, 223, 10.1083/jcb.200805092 · DOI
  87. Valdmanis PN, 2007, Am J Hum Genet, 80, 152, 10.1086/510782 · DOI · Paper page
  88. 10.1091/mbc.e10-04-0372 · DOI
  89. Wei AH, 2013, Pigment Cell Melanoma Res, 26, 176, 10.1111/pcmr.12051 · DOI
  90. Wickner W, 2008, Nat Struct Mol Biol, 15, 658, 10.1038/nsmb.1451 · DOI
  91. Yi L, 2012, Human Mol Genet, 21, 1794, 10.1093/hmg/ddr612 · DOI
  92. Zech T, 2011, J Cell Sci, 124, 3753, 10.1242/jcs.080986 · DOI · Paper page
  93. Zeng Y, 2009, Nat Methods, 6, 207, 10.1038/nmeth.1305 · DOI
  94. Zlatic SA, 2010, J Vis Exp, 1855

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Metadata

Authors
Ryder, P. V., Vistein, R., Gokhale, A., Seaman, M. N., Puthenveedu, M. A., & Faundez, V.
Venue
Molecular Biology of the Cell
Published
2013-07-15
Volume
24
Issue
14
Pages
2269-2284
ISSN
  • 1059-1524
  • 1939-4586
Cited by
87
References
6
Language
en

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