Genomic Features of Intertypic Recombinant Sabin Poliovirus Strains Excreted by Primary Vaccinees
Open accessAbstract
The trivalent oral poliomyelitis vaccine (OPV) contains three different poliovirus serotypes. It use therefore creates particularly favorable conditions for mixed infection of gut cells, and indeed intertypic vaccine-derived recombinants (VdRec) have been frequently found in patients with vaccine-associated paralytic poliomyelitis. Nevertheless, there have not been extensive searches for VdRec in healthy vaccinees following immunization with OPV. To determine the incidence of VdRec and their excretion kinetics in primary vaccinees, and to establish the general genomic features of the corresponding recombinant genomes, we characterized poliovirus isolates excreted by vaccinees following primary immunization with OPV. Isolates were collected from 67 children 2 to 60 days following vaccination. Recombinant strains were identified by multiple restriction fragment length polymorphism assays. The localization of junction sites in recombinant genomes was also determined. VdRec excreted by vaccinees were first detected 2 to 4 days after vaccination. The highest rate of recombinants was on day 14. The frequency of VdRec depends strongly on the serotype of the analyzed isolates (2, 53, and 79% of recombinant strains in the last-excreted type 1, 2, and 3 isolates, respectively). Particular associations of genomic segments were preferred in the recombinant genomes, and recombination junctions were found in the genomic region encoding the nonstructural proteins. Recombination junctions generally clustered in particular subgenomic regions that were dependent on the serotype of the isolate and/or on the associations of genomic segments in recombinants. Thus, VdRec are frequently excreted by vaccinees, and the poliovirus replication machinery requirements or selection factors appear to act in vivo to shape the features of the recombinant genomes.
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Many isolates from VAPP cases, AFP cases with incidental isolation of vaccine-related virus, and healthy OPV recipients are vaccine/vaccine recombinants.
“Many isolates from VAPP cases, AFP cases with incidental isolation of vaccine-related virus (much more frequent thanVAPPcases),andhealthyOPVrecipients are vaccine/vaccine recombinants (18, 33, 59, 91, 106).”
From VACCINE-DERIVED POLIOVIRUSES AND THE ENDGAME STRATEGY FOR GLOBAL POLIO ERADICATION (2005) · cites this paper as [33]
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Thompson, J. D., Higgins, D. G., & Gibson, T. J. (1994) · Nucleic Acids Research · doi:10.1093/nar/22.22.4673 · Cited by 64,617 · see citing works
RNA recombination in animal and plant viruses
Lai, M. M. C. (1992) · Microbiological Reviews · doi:10.1128/mr.56.1.61-79.1992 · Cited by 665 · see citing works
Evolutionary aspects of recombination in RNA viruses
Worobey, M., & Holmes, E. C. (1999) · Journal of General Virology · doi:10.1099/0022-1317-80-10-2535 · Cited by 556 · see citing works
Wimmer, E., Hellen, C. U. T., & Cao, X. (1993) · Annual Review of Genetics · doi:10.1146/annurev.ge.27.120193.002033 · Cited by 554 · see citing works
The mechanism of RNA recombination in poliovirus
Kirkegaard, K., & Baltimore, D. (1986) · Cell · doi:10.1016/0092-8674(86)90600-8 · Cited by 499 · see citing works
Complete nucleotide sequences of all three poliovirus serotype genomes
Toyoda, H., Kohara, M., Kataoka, Y., Suganuma, T., Omata, T., Imura, N., & Nomoto, A. (1984) · Journal of Molecular Biology · doi:10.1016/0022-2836(84)90084-6 · Cited by 418 · see citing works
New Insights into the Mechanisms of RNA Recombination
Nagy, P. D., & Simon, A. E. (1997) · Virology · doi:10.1006/viro.1997.8681 · Cited by 389 · see citing works
Geographic distribution of wild poliovirus type 1 genotypes
Rico-Hesse, R., Pallansch, M. A., Nottay, B. K., & Kew, O. M. (1987) · Virology · doi:10.1016/0042-6822(87)90001-8 · Cited by 328 · see citing works
History of Sabin attenuated poliovirus oral live vaccine strains
Sabin, A. B., & Boulger, L. R. (1973) · Journal of Biological Standardization · doi:10.1016/0092-1157(73)90048-6 · Cited by 318 · see citing works
Genetic recombination with newcastle disease virus, polioviruses, and influenza
Hirst, G. K. (1962) · Cold Spring Harbor Symposia on Quantitative Biology · doi:10.1101/sqb.1962.027.001.028 · Cited by 269 · see citing works
The molecular biology of poliovaccines
Minor, P. D. (1992) · Journal of General Virology · doi:10.1099/0022-1317-73-12-3065 · Cited by 217 · see citing works
Minor, P. D., John, A., Ferguson, M. A. J., & Icenogle, J. P. (1986) · Journal of General Virology · doi:10.1099/0022-1317-67-4-693 · Cited by 203 · see citing works
Natural genetic exchanges between vaccine and wild poliovirus strains in humans.
Guillot, S., Caro, V., Cuervo, N., Korotkova, E., Combiescu, M., Persu, A., Aubert-Combiescu, A., Delpeyroux, F., & Crainic, R. (2000) · Journal of Virology · doi:10.1128/jvi.74.18.8434-8443.2000 · Cited by 202 · see citing works
Self-citationGenetic recombination with poliovirus type 1
Ledinko, N. (1963) · Virology · doi:10.1016/0042-6822(63)90145-4 · Cited by 163 · see citing works
Balanant, J., Guillot, S., Candrea, A., Delpeyroux, F., & Crainic, R. (1991) · Virology · doi:10.1016/0042-6822(91)90434-d · Cited by 160 · see citing works
Self-citationPoliovirus RNA recombination: mechanistic studies in the absence of selection.
Jarvis, T. C., & Kirkegaard, K. (1992) · The EMBO Journal · doi:10.1002/j.1460-2075.1992.tb05386.x · Cited by 152 · see citing works
Furlone, M., Guillot, S., Otelea, D., Balanant, J., Candrea, A., & Crainic, R. (1993) · Virology · doi:10.1006/viro.1993.1468 · Cited by 148 · cited 3× · see citing works
“Such recombinants were found to appear very frequently (11, 13, 14 , 18, 19, 34, 36).”
BackgroundMethodInfluentialSelf-citationKing, A. M. Q., McCahon, D., Slade, W. R., & Newman, J. W. I. (1982) · Cell · doi:10.1016/0092-8674(82)90454-8 · Cited by 142 · see citing works
Gavrilin, G. V., Cherkasova, E. A., Lipskaya, G. Y., Kew, O. M., & Agol, V. I. (2000) · Journal of Virology · doi:10.1128/jvi.74.16.7381-7390.2000 · Cited by 138 · see citing works
Picornavirus RNA translation: roles for cellular proteins
Belsham, G. J., & Sonenberg, N. (2000) · Trends in Microbiology · doi:10.1016/s0966-842x(00)01788-1 · Cited by 132 · see citing works
Random nature of coronavirus RNA recombination in the absence of selection pressure
Banner, L. R., & Lai, M. M. C. (1991) · Virology · doi:10.1016/0042-6822(91)90795-d · Cited by 128 · see citing works
Nonreplicative RNA Recombination in Poliovirus
Gmyl, A. P., Belousov, E. V., Maslova, S. V., Khitrina, E. V., Chetverin, A. B., & Agol, V. I. (1999) · Journal of Virology · doi:10.1128/jvi.73.11.8958-8965.1999 · Cited by 128 · see citing works
Macadam, A. J., Arnold, C., Howlett, J., John, A., Marsden, S., Taffs, F., Reeve, P., Hamada, N., Wareham, K., Almond, J., et al. (1989) · Virology · doi:10.1016/0042-6822(89)90183-9 · Cited by 125 · see citing works
Paradoxes of the replication of picornaviral genomes
Agol, V. I., Paul, A. V., & Wimmer, E. (1999) · Virus Research · doi:10.1016/s0168-1702(99)00037-4 · Cited by 112 · see citing works
Intertypic genomic rearrangements of poliovirus strains in vaccinees
Cammack, N. C., Phillips, A., Dunn, G., Patel, V., & Minor, P. D. (1988) · Virology · doi:10.1016/0042-6822(88)90113-4 · Cited by 111 · see citing works
Kuge, S., Saito, I., & Nomoto, A. (1986) · Journal of Molecular Biology · doi:10.1016/0022-2836(86)90270-6 · Cited by 111 · see citing works
Intertypic genomic rearrangements of poliovirus strains in vaccinees
CAMMACK, N., PHILLIPS, A., DUNN, G., PATEL, V, & MINOR, P. (1988) · Virology · doi:10.1016/s0042-6822(88)90113-4 · Cited by 111 · see citing works
Georgescu, M., Delpeyroux, F., Tardy-Panit, M., Balanant, J., Combiescu, M., Aubert-Combiescu, A., Guillot, S., & Crainic, R. (1994) · Journal of Virology · doi:10.1128/jvi.68.12.8089-8101.1994 · Cited by 109 · see citing works
Self-citationSequences and Structures Required for Recombination Between Virus-Associated RNAs
Cascone, P. J., Haydar, T. F., & Simon, A. E. (1993) · Science · doi:10.1126/science.8484119 · Cited by 109 · see citing works
Engineering of homologous recombination hotspots with AU-rich sequences in brome mosaic virus
Nagy, P. D., & Bujarski, J. J. (1997) · Journal of Virology · doi:10.1128/jvi.71.5.3799-3810.1997 · Cited by 98 · see citing works
Lipskaya, G. Y., Muzychenko, A. R., Kutitova, O. K., Maslova, S. V., Equestre, M., Drozdov, S. G., Bercoff, R. P., & Agol, V. I. (1991) · Journal of Medical Virology · doi:10.1002/jmv.1890350415 · Cited by 97 · see citing works
Georgescu, M. M., Balanant, J., Macadam, A., Otelea, D., Combiescu, M., Combiescu, A. A., Crainic, R., & Delpeyroux, F. (1997) · Journal of Virology · doi:10.1128/jvi.71.10.7758-7768.1997 · Cited by 83 · see citing works
Self-citationTolskaya, E. A., Romanova, L. I., Blinov, V. M., Viktorova, E. G., Sinyakov, A. N., Kolesnikova, M. S., & Agol, V. I. (1987) · Virology · doi:10.1016/0042-6822(87)90170-x · Cited by 81 · see citing works
King, A. M. Q. (1988) · Nucleic Acids Research · doi:10.1093/nar/16.24.11705 · Cited by 75 · see citing works
A model for rearrangements in RNA genomes
Pilipenko, E. V., Gmyl, A. P., & Agol, V. I. (1995) · Nucleic Acids Research · doi:10.1093/nar/23.11.1870 · Cited by 70 · see citing works
Recombination and Other Genomic Rearrangements in Picornaviruses
Agol, V. I. (1997) · Seminars in Virology · doi:10.1006/smvy.1997.0112 · Cited by 66 · see citing works
Tripartite genome organization of a natural type 2 vaccine/nonvaccine recombinant poliovirus
Georgescu, M., Delpeyroux, F., & Crainic, R. (1995) · Journal of General Virology · doi:10.1099/0022-1317-76-9-2343 · Cited by 64 · see citing works
Self-citationKohara, M., Abe, S., Komatsu, T., Tago, K., Arita, M., & Nomoto, A. (1988) · Journal of Virology · doi:10.1128/jvi.62.8.2828-2835.1988 · Cited by 57 · see citing works
Biochemical evidence for intertypic genetic recombination of polioviruses
Romanova, L. I., Tolskaya, E. A., Kolesnikova, M. S., & Agol, V. I. (1980) · FEBS Letters · doi:10.1016/0014-5793(80)81229-4 · Cited by 44 · see citing works
Transduction of a human RNA sequence by poliovirus
Charini, W. A., Todd, S., Gutman, G. A., & Semler, B. L. (1994) · Journal of Virology · doi:10.1128/jvi.68.10.6547-6552.1994 · Cited by 43 · see citing works
Molecular Aspects of Poliovirus Biology with a Special Focus on the Interactions with Nerve Cells
Blondel, B., Duncan, G., Couderc, T., Delpeyroux, F., Pavio, N., & Colbère-Garapin, F. (1998) · Journal of NeuroVirology · doi:10.3109/13550289809113478 · Cited by 42 · see citing works
Self-citationBiochemical evidence of recombination within the unsegmented RNA genome of aphthovirus
King, A. M. Q., McCahon, D., Slade, W. R., & Newman, J. W. I. (1982) · Journal of Virology · doi:10.1128/jvi.41.1.66-77.1982 · Cited by 40 · see citing works
Duggal, R., & Wimmer, E. (1999) · Virology · doi:10.1006/viro.1999.9703 · Cited by 32 · see citing works
Petitjean, J., Quibriac, M., Freymuth, F., Fuchs, F., Laconche, N., Aymard, M., & Kopecká, H. (1990) · Journal of Clinical Microbiology · doi:10.1128/jcm.28.2.307-311.1990 · Cited by 32 · see citing works
Minor, P. D., Ferguson, M. A. J., Katrak, K., Wood, D., John, A., Howlett, J., Dunn, G., Burke, K. L., & Almond, J. W. (1991) · Journal of General Virology · doi:10.1099/0022-1317-72-10-2475 · Cited by 30 · see citing works
Vaccine-associated cases of poliomyelitis over a 30 year period in East Germany
Driesel, G., Diedrich, S., Künkel, U., & Schreier, E. (1995) · European Journal of Epidemiology · doi:10.1007/bf01720298 · Cited by 25 · see citing works
Lund, A. H., Mikkelsen, J. G., Schmidt, J., Duch, M., & Pedersen, F. S. (1999) · Journal of Virology · doi:10.1128/jvi.73.11.9614-9618.1999 · Cited by 25 · see citing works
Public Health Dispatch: Outbreak of Poliomyelitis--Dominican Republic and Haiti, 2000
(2001) · JAMA · doi:10.1001/jama.285.4.403 · Cited by 24 · see citing works
Ion-Nedelcu, N., Strebel, P. M., Toma, F., Biberi-Moroeanu, S., Combiescu, M., Persu, A., Aubert-Combiescu, A., Plotkin, S. A., & Sutter, R. W. (1997) · The Journal of Infectious Diseases · doi:10.1093/infdis/175.supplement_1.s241 · Cited by 22 · see citing works
Self-citationRandom selection: a model for poliovirus infection of the central nervous system.
Georgescu, M. M., Ozden, S., Crainic, R., & Balanant, J. (1997) · Journal of General Virology · doi:10.1099/0022-1317-78-8-1819 · Cited by 21 · see citing works
Self-citationFriedrich, F., Ef, D.-S., & Hg, S. (1996) · PubMed · Cited by 21 · see citing works
Pierangeli, A., Bucci, M., Forzan, M., Pagnotti, P., Equestre, M., & Bercoff, R. P. (1999) · Journal of General Virology · doi:10.1099/0022-1317-80-8-1889 · Cited by 14 · see citing works
Genetic transfer of guanidine resistance from type 2 to type 1 poliovirus
Sergiescu, D., Horodniceanu, F., Klein, R., & Crainic, R. (1966) · Archives of Virology · doi:10.1007/bf01241844 · Cited by 12 · see citing works
Self-citation
Flagged first, then by citations
Research works printed but not linked: 3
- [1]Agol V I. Recombination and other rearrangements in picomaviruses. Semin Virol. 1997;8:77–84. [Google Scholar]
- [25]Kew O M, Nottay B K. Evolution of the oral poliovaccine strains in humans occur by both mutation and intramolecular recombination. In: Chanock R, Lerner R, editors. Modern approaches to vaccines. N.Y: Cold Spring Harbor Press; 1984. pp. 357–367. [Google Scholar]
- [53]World Health Organization. Manual for poliovirus surveillance WHO/EPI/GEN/97.01. Geneva, Switzerland: World Health Organization; 1997. [Google Scholar]
Cited by
Sorted by citations
Domingo, E., Sheldon, J., & Perales, C. (2012) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.05023-11 · Cited by 1,009 · see citing works
VACCINE-DERIVED POLIOVIRUSES AND THE ENDGAME STRATEGY FOR GLOBAL POLIO ERADICATION
Kew, O. M., Sutter, R. W., de Gourville, E. M., Dowdle, W. R., & Pallansch, M. A. (2005) · Annual Review of Microbiology · doi:10.1146/annurev.micro.58.030603.123625 · Cited by 703 · see citing works
Microevolution and virulence of dengue viruses
Rico-Hesse, R. (2003) · Advances in virus research · doi:10.1016/s0065-3527(03)59009-1 · Cited by 422 · see citing works
Frequency and Dynamics of Recombination within Different Species of Human Enteroviruses
Peter Simmonds, K., & Welch, J. (2005) · Journal of Virology · doi:10.1128/jvi.80.1.483-493.2006 · Cited by 269 · see citing works
Oberste, M. S., Maher, K., & Pallansch, M. A. (2003) · Journal of Virology · doi:10.1128/jvi.78.2.855-867.2004 · Cited by 258 · see citing works
Human enterovirus 71 and hand, foot and mouth disease
Wong, S. S. Y., Yip, C. C., Lau, S. K. P., & Yuen, K. (2010) · Epidemiology and Infection · doi:10.1017/s0950268809991555 · Cited by 248 · see citing works
Role of recombination in evolution of enteroviruses
Lukashev, A. N. (2004) · Reviews in Medical Virology · doi:10.1002/rmv.457 · Cited by 224 · see citing works
Simmonds, P. (2006) · Journal of Virology · doi:10.1128/jvi.01076-06 · Cited by 204 · see citing works
Bacteria Facilitate Enteric Virus Co-infection of Mammalian Cells and Promote Genetic Recombination
Erickson, A. K., Jesudhasan, P. R. R., Mayer, M. J., Narbad, A., Winter, S., & Pfeiffer, J. K. (2017) · Cell Host & Microbe · doi:10.1016/j.chom.2017.11.007 · Cited by 187 · see citing works
Recombination in circulating enteroviruses
Lukashev, A. N., Lashkevich, V. A., Ivanova, O. E., Koroleva, G. A., Hinkkanen, A. E., & Ilonen, J. (2003) · Journal of Virology · doi:10.1128/jvi.77.19.10423-10431.2003 · Cited by 170 · see citing works
Sutter, R. W., Kew, O. M., & Cochi, S. L. (2008) · Elsevier eBooks · doi:10.1016/b978-1-4160-3611-1.50030-1 · Cited by 167 · see citing works
Genetic variability of hepatitis A virus
Costa‐Mattioli, M., Napoli, A. D., Ferré, V., Billaudel, S., Pérez-Bercoff, R., & Cristina, J. (2003) · Journal of General Virology · doi:10.1099/vir.0.19532-0 · Cited by 165 · see citing works
Human enterovirus 71 epidemics: what's next?
Yip, C., Lau, S., Woo, P. C. Y., & Yuen, K. Y. (2013) · Emerging Health Threats Jour · doi:10.3402/ehtj.v6i0.19780 · Cited by 153 · see citing works
Circulation of type 1 vaccine-derived poliovirus in the philippines in 2001
Shimizu, H., Thorley, B., Paladin, F. J., Brussen, K. A., Stambos, V., Yuen, L., Utama, A., Tano, Y., Arita, M., Yoshida, H., et al. (2004) · Journal of Virology · doi:10.1128/jvi.78.24.13512-13521.2004 · Cited by 146 · see citing works
Lindberg, A., Andersson, P. O., Savolainen, C., Mulders, M. N., & Hovi, T. (2003) · Journal of General Virology · doi:10.1099/vir.0.18971-0 · Cited by 142 · see citing works
Leitch, E. C. M., Cabrerizo, M., Cardosa, J., Harvala, H., Ivanova, O. E., Koike, S., Kroes, A. C. M., Lukashev, A. N., Perera, D., Roivainen, M., et al. (2011) · Journal of Virology · doi:10.1128/jvi.06065-11 · Cited by 137 · see citing works
RNA Recombination Plays a Major Role in Genomic Change during Circulation of Coxsackie B Viruses
Oberste, M. S., Peñaranda, S., & Pallansch, M. A. (2004) · Journal of Virology · doi:10.1128/jvi.78.6.2948-2955.2004 · Cited by 137 · see citing works
Combelas, N., Holmblat, B., Joffret, M.-L., Colbère-Garapin, F., & Delpeyroux, F. (2011) · Viruses · doi:10.3390/v3081460 · Cited by 135 · see citing works
Self-citationJegouic, S., Joffret, M.-L., Blanchard, C., Riquet, F. B., Perret, C., Pelletier, I., Colbere-Garapin, F., Rakoto-Andrianarivelo, M., & Delpeyroux, F. (2009) · PLoS Pathogens · doi:10.1371/journal.ppat.1000412 · Cited by 116 · see citing works
Self-citationTransmission networks and population turnover of echovirus 30
Leitch, E. C. M., Bendig, J., Cabrerizo, M., Cardosa, J., Hyypiä, T., Ivanova, O. E., Kelly, A., Kroes, A. C. M., Lukashev, A., MacAdam, A., et al. (2009) · Journal of Virology · doi:10.1128/jvi.02109-08 · Cited by 109 · see citing works
Huang, T., Wang, W., Bessaud, M., Ren, P., Sheng, J., Yan, H., Zhang, J., Lin, X., Wang, Y., Delpeyroux, F., et al. (2009) · PLoS ONE · doi:10.1371/journal.pone.0006355 · Cited by 107 · see citing works
Self-citationYang, C.-F., Chen, H., Jorba, J. C., Sun, H.-C., Yang, S.-J., Lee, H.-C., Huang, Y., Lin, T., Chen, P., Shimizu, H., et al. (2005) · Journal of Virology · doi:10.1128/jvi.79.20.12623-12634.2005 · Cited by 104 · see citing works
Epidemics to eradication: the modern history of poliomyelitis
Jesus, N. H. D. (2007) · Virology Journal · doi:10.1186/1743-422x-4-70 · Cited by 104 · see citing works
Long-term circulation of vaccine-derived poliovirus that causes paralytic disease
Cherkasova, E. A., Korotkova, E. A., Yakovenko, M. L., Ivanova, O. E., Eremeeva, T. P., Chumakov, K. M., & Agol, V. I. (2002) · Journal of Virology · doi:10.1128/jvi.76.13.6791-6799.2002 · Cited by 103 · see citing works
Tebbens, R. J. D., Pallansch, M. A., Kim, J., Burns, C. C., Kew, O. M., Oberste, M. S., Diop, O. M., Wassilak, S. G. F., Cochi, S. L., & Thompson, K. M. (2013) · Risk Analysis · doi:10.1111/risa.12022 · Cited by 101 · see citing works
Cherkasova, E., Laassri, M., Chizhikov, V., Korotkova, E., Dragunsky, E., Agol, V. I., & Chumakov, K. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1633511100 · Cited by 101 · see citing works
Reemergence of recombinant vaccine–derived poliovirus outbreak in Madagascar.
Rakoto‐Andrianarivelo, M., Gumede, N., Jegouic, S., Balanant, J., Andriamamonjy, S. N., Rabemanantsoa, S., Birmingham, M., Randriamanalina, B., Nkolomoni, L., Venter, M., et al. (2008) · The Journal of Infectious Diseases · doi:10.1086/587694 · Cited by 100 · see citing works
Self-citationCo-Circulation and Evolution of Polioviruses and Species C Enteroviruses in a District of Madagascar
Rakoto-Andrianarivelo, M., Guillot, S., Iber, J., Balanant, J., Blondel, B., Riquet, F., Martin, J., Kew, O., Randriamanalina, B., Razafinimpiasa, L., et al. (2007) · PLoS Pathogens · doi:10.1371/journal.ppat.0030191 · Cited by 96 · see citing works
Self-citationMechanisms and consequences of positive-strand RNA virus recombination
Bentley, K., & Evans, D. J. (2018) · Journal of General Virology · doi:10.1099/jgv.0.001142 · Cited by 99 · see citing works
Blomqvist, S., Bruu, A., Stenvik, M., & Hovi, T. (2003) · Journal of General Virology · doi:10.1099/vir.0.18708-0 · Cited by 94 · see citing works
Appel, N., Herian, U., & Bartenschlager, R. F. W. (2004) · Journal of Virology · doi:10.1128/jvi.79.2.896-909.2005 · Cited by 93 · see citing works
Recombination of Globally Circulating Varicella-Zoster Virus
Norberg, P., Depledge, D. P., Kundu, S., Atkinson, C. E., Brown, J. R., Haque, T., Hussaini, Y., MacMahon, E. M. E., Molyneaux, P., Papaevangelou, V., et al. (2015) · Journal of Virology · doi:10.1128/jvi.00437-15 · Cited by 90 · see citing works
Martín, J. E.-S., Samoilovich, E., Dunn, G., Lackenby, A., Fel'dman, E. V., Heath, A., Svirchevskaya, E., Cooper, G., Yermalovich, M. A., & Minor, P. D. (2002) · Journal of Virology · doi:10.1128/jvi.76.21.10921-10928.2002 · Cited by 87 · see citing works
Gaunt, E. R., Harvala, H., Österback, R., Sreenu, V. B., Thomson, E. C., Waris, M. E., & Peter Simmonds, K. (2015) · Journal of General Virology · doi:10.1099/vir.0.000062 · Cited by 81 · see citing works
Lowry, K., Woodman, A., Cook, J., & Evans, D. J. (2014) · PLoS Pathogens · doi:10.1371/journal.ppat.1004191 · Cited by 78 · see citing works
Pliaka, V., Kyriakopoulou, Z., & Markoulatos, P. (2012) · Expert Review of Vaccines · doi:10.1586/erv.12.28 · Cited by 78 · see citing works
Chevaliez, S., Szendrôi, A., Caro, V., Balanant, J., Guillot, S., Berencsi, G., & Delpeyroux, F. (2004) · Virology · doi:10.1016/j.virol.2004.04.026 · Cited by 77 · see citing works
Self-citationAppearance of mosaic enterovirus 71 in the 2008 outbreak of China
Ding, N., Wang, X., Sun, S.-W., Song, Q., Li, S., & He, C.-Q. (2009) · Virus Research · doi:10.1016/j.virusres.2009.06.006 · Cited by 73 · see citing works
Neurovirulent Vaccine-Derived Polioviruses in Sewage from Highly Immune Populations
Shulman, L. M., Manor, Y., Sofer, D., Handsher, R., Swartz, T. A., Delpeyroux, F., & Mendelson, E. (2006) · PLoS ONE · doi:10.1371/journal.pone.0000069 · Cited by 73 · see citing works
Self-citationFamulare, M., Chang, S. T., Iber, J. C., Zhao, K., Adeniji, J. A., Bukbuk, D. N., Baba, M., Behrend, M. R., Burns, C. C., & Oberste, M. S. (2015) · Journal of Virology · doi:10.1128/jvi.01532-15 · Cited by 72 · see citing works
Tapparel, C., Junier, T., Gerlach, D., Cordey, S., Belle, S. V., Perrin, L. H., Zdobnov, E. M., & Kaiser, L. (2007) · BMC Genomics · doi:10.1186/1471-2164-8-224 · Cited by 72 · see citing works
Appearance of intratypic recombination of enterovirus 71 in Taiwan from 2002 to 2005
Huang, S.-C., Hsu, Y.-W., Wang, H., Huang, S.-W., Kiang, D., Tsai, H., Wang, S.-M., Liu, C., Lin, K.-H., Su, I., et al. (2007) · Virus Research · doi:10.1016/j.virusres.2007.10.002 · Cited by 71 · see citing works
Competition-colonization dynamics in an RNA virus
Ojosnegros, S., Beerenwinkel, N., Tibor Antal, A., Nowak, M. A., Escarmı́s, C., & Domingo, E. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0909787107 · Cited by 67 · see citing works
Mechanisms of genetic variation in polioviruses
Savolainen‐Kopra, C., & Blomqvist, S. (2010) · Reviews in Medical Virology · doi:10.1002/rmv.663 · Cited by 67 · see citing works
The circulation of subgenogroups B5 and C5 of enterovirus 71 in Taiwan from 2006 to 2007
Huang, Y.-P., Lin, T., Kuo, C., Lin, M.-W., Yao, C.-Y., Liao, H.-W., Hsu, L., Yang, C.-F., Yang, J., Chen, P., et al. (2008) · Virus Research · doi:10.1016/j.virusres.2008.07.015 · Cited by 64 · see citing works
Identification and Manipulation of the Molecular Determinants Influencing Poliovirus Recombination
Runckel, C., Westesson, O., Andino, R., & DeRisi, J. L. (2013) · PLoS Pathogens · doi:10.1371/journal.ppat.1003164 · Cited by 61 · see citing works
Evidence of recombination in natural populations of hepatitis A virus
Costa‐Mattioli, M., Ferré, V., Casañe, D., Perez-Bercoff, R., Coste‐Burel, M., Imbert‐Marcille, B., Andre, E. C. M., Bressollette‐Bodin, C., Billaudel, S., & Cristina, J. (2003) · Virology · doi:10.1016/s0042-6822(03)00109-0 · Cited by 58 · see citing works
Holmblat, B., Jégouic, S., Muslin, C., Blondel, B., Joffret, M., & Delpeyroux, F. (2014) · mBio · doi:10.1128/mbio.01119-14 · Cited by 58 · see citing works
Self-citationMolecular analysis of the echovirus 18 prototype
Andersson, P. O., Edman, K., & Lindberg, A. (2002) · Virus Research · doi:10.1016/s0168-1702(02)00019-9 · Cited by 57 · see citing works
Cherkasova, E. A., Yakovenko, M. L., Rezapkin, G. V., Korotkova, E. A., Ivanova, O. E., Eremeeva, T. P., Krasnoproshina, L. I., Romanenkova, N. I., Rozaeva, N. R., Sirota, L., et al. (2005) · Journal of Virology · doi:10.1128/jvi.79.2.1062-1070.2005 · Cited by 55 · see citing works
Self-citationSutter, R. W., Kew, O. M., Cochi, S. L., & Aylward, R. B. (2013) · Elsevier eBooks · doi:10.1016/b978-1-4557-0090-5.00035-5 · Cited by 55 · see citing works
Isolation of Sabin-Like Polioviruses from Wastewater in a Country Using Inactivated Polio Vaccine
Zurbriggen, S., Tobler, K., Abril, C. E., Diedrich, S., Ackermann, M., Pallansch, M. A., & Metzler, A. E. (2008) · Applied and Environmental Microbiology · doi:10.1128/aem.02764-07 · Cited by 55 · see citing works
A Naturally Occurring Recombinant Enterovirus Expresses a Torovirus Deubiquitinase
Shang, P., Misra, S., Hause, B. M., & Fāng, Y. (2017) · Journal of Virology · doi:10.1128/jvi.00450-17 · Cited by 55 · see citing works
High Frequency of Human Enterovirus Species C Circulation in Madagascar
Andrianarivelo, M. R., Rousset, D., Razafindratsimandresy, R., Chevaliez, S., Guillot, S., Balanant, J., & Delpeyroux, F. (2005) · Journal of Clinical Microbiology · doi:10.1128/jcm.43.1.242-249.2005 · Cited by 52 · see citing works
Self-citationBouslama, L., Nasri, D., Chollet, L., Belguith, K., Bourlet, T., Aouni, M., Pozzetto, B., & Pillet, S. (2007) · Journal of Virology · doi:10.1128/jvi.00180-07 · Cited by 51 · see citing works
Plaques Formed by Mutagenized Viral Populations Have Elevated Coinfection Frequencies
Aguilera, E. R., Erickson, A. K., Jesudhasan, P. R. R., Robinson, C. M., & Pfeiffer, J. K. (2017) · mBio · doi:10.1128/mbio.02020-16 · Cited by 50 · see citing works
Kalkowska, D. A., Pallansch, M. A., Wilkinson, A. L., Bandyopadhyay, A. S., Konopka‐Anstadt, J. L., Burns, C. C., Oberste, M. S., Wassilak, S. G. F., Badizadegan, K., & Thompson, K. M. (2020) · Risk Analysis · doi:10.1111/risa.13622 · Cited by 47 · see citing works
Mueller, J. E., Bessaud, M., Huang, Q. S., Martínez, L. C., Barril, P. A., Morel, V., Balanant, J., Bocacao, J., Hewitt, J., Gessner, B. D., et al. (2009) · Applied and Environmental Microbiology · doi:10.1128/aem.02201-08 · Cited by 45 · see citing works
Self-citationJoffret, M.-L., Jégouic, S., Bessaud, M., Balanant, J., Tran, C., Caro, V., Holmblat, B., Razafindratsimandresy, R., Reynes, J.-M., Rakoto-Andrianarivelo, M., et al. (2012) · The Journal of Infectious Diseases · doi:10.1093/infdis/jis204 · Cited by 44 · see citing works
Self-citationLoncoman, C., Vaz, P. K., Coppo, M. J. C., Hartley, C. A., Morera, F. J., Browning, G. F., & Devlin, J. M. (2016) · Infection Genetics and Evolution · doi:10.1016/j.meegid.2016.12.022 · Cited by 42 · see citing works
Bessaud, M., Jégouic, S., Joffret, M., Barge, C., Balanant, J., Gouandjika‐Vasilache, I., & Delpeyroux, F. (2008) · Journal of Virological Methods · doi:10.1016/j.jviromet.2008.01.027 · Cited by 38 · see citing works
Self-citationVaccine derived bi- and multi-recombinant Sabin strains
Paximadi, E., Karakasiliotis, I., Bolanaki, E., Krikelis, A., & Markoulatos, P. (2006) · Virus Genes · doi:10.1007/s11262-006-0071-y · Cited by 38 · see citing works
Phylogenetic Relationships and Molecular Adaptation Dynamics of Human Rhinoviruses
Lewis-Rogers, N., Bendall, M. L., & Crandall, K. A. (2009) · Molecular Biology and Evolution · doi:10.1093/molbev/msp009 · Cited by 33 · see citing works
Tao, Z., Wang, H., Xu, A., Zhang, Y., Song, L., Zhu, S., Li, Y., Yan, D., Liu, G., Yoshida, H., et al. (2010) · Virus Research · doi:10.1016/j.virusres.2010.02.014 · Cited by 33 · see citing works
Karakasiliοtis, I., Markoulatos, P., & Katsorchis, T. (2003) · Molecular and Cellular Probes · doi:10.1016/j.mcp.2003.09.009 · Cited by 33 · see citing works
Complete genomic characterization of an intertypic Sabin 3/Sabin 2 capsid recombinant
Dedepsidis, E., Pliaka, V., Kyriakopoulou, Z., Brakoulias, C., Levidiotou-Stefanou, S., Pratti, A., Mamuris, Z., & Markoulatos, P. (2008) · FEMS Immunology & Medical Microbiology · doi:10.1111/j.1574-695x.2008.00381.x · Cited by 32 · see citing works
Siafakas, N., Markoulatos, P., & Levidiotou-Stefanou, S. (2004) · Molecular and Cellular Probes · doi:10.1016/j.mcp.2004.06.005 · Cited by 29 · see citing works
Strength in numbers: Mechanisms of viral co-infection
Aguilera, E. R., & Pfeiffer, J. K. (2019) · Virus Research · doi:10.1016/j.virusres.2019.03.003 · Cited by 26 · see citing works
Zhang, Y., Zhu, S., Yan, D., Liu, G., Bai, R., Wang, D., Chen, L., Zhu, H., An, H., Kew, O. M., et al. (2010) · PLoS ONE · doi:10.1371/journal.pone.0015300 · Cited by 29 · see citing works
Papaventsis, D. C., Siafakas, N., Markoulatos, P., Papageorgiou, G. T., Kourtis, C., Chatzichristou, E., Economou, C., & Levidiotou, S. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.1.72-79.2005 · Cited by 28 · see citing works
Evolution of a rare vaccine-derived multirecombinant poliovirus
Karakasiliοtis, I., Paximadi, E., & Markoulatos, P. (2005) · Journal of General Virology · doi:10.1099/vir.0.80823-0 · Cited by 28 · see citing works
Isolation of Vaccine-Like Poliovirus Strains in Sewage Samples From the United Kingdom
Majumdar, M., Klapsa, D., Wilton, T., Akello, J. O., Anscombe, C., Allen, D. J., Mee, E. T., Minor, P. D., & Martín, J. E.-S. (2017) · The Journal of Infectious Diseases · doi:10.1093/infdis/jix667 · Cited by 27 · see citing works
Zhang, Y., Wang, H., Zhu, S., Li, Y., Li, S., Liu, Y., Liu, G., Nishimura, Y., Chen, L., Yan, D., et al. (2009) · Journal of General Virology · doi:10.1099/vir.0.014258-0 · Cited by 25 · see citing works
Stability of Yellow Fever Virus under Recombinatory Pressure as Compared with Chikungunya Virus
McGee, C. E., Tsetsarkin, K. A., Guy, B., Lang, J., Plante, K. S., Vanlandingham, D. L., & Higgs, S. (2011) · PLoS ONE · doi:10.1371/journal.pone.0023247 · Cited by 25 · see citing works
Characterization of CHAT and Cox Type 1 Live-Attenuated Poliovirus Vaccine Strains
Martín, J. E.-S., & Minor, P. D. (2002) · Journal of Virology · doi:10.1128/jvi.76.11.5339-5349.2002 · Cited by 25 · see citing works
Korotkova, E., Laassri, M., Zagorodnyaya, T., Petrovskaya, S., Rodionova, E., Cherkasova, E., Gmyl, A., Ivanova, O., Eremeeva, T., Lipskaya, G., et al. (2017) · Viruses · doi:10.3390/v9110353 · Cited by 23 · see citing works
Genomic Analysis of Recombinant Sabin Clinical Isolates
Paximadi, E., Karakasiliοtis, I., Mamuris, Z., Stathopoulos, C., Krikelis, V., & Markoulatos, P. (2006) · Virus Genes · doi:10.1007/s11262-005-6877-1 · Cited by 24 · see citing works
Molecular Mechanisms of Poliovirus Variation and Evolution
Agol, V. I. (2006) · Current Topics in Microbiology and Immunology · doi:10.1007/3-540-26397-7_8 · Cited by 73 · see citing works
Genetic analysis of poliovirus strains isolated from sewage in Poland
Kuryk, Ł., Wieczorek, M., Diedrich, S., Böttcher, S., Witek, A., & Litwińska, B. (2013) · Journal of Medical Virology · doi:10.1002/jmv.23803 · Cited by 22 · see citing works
Blomqvist, S., Savolainen‐Kopra, C., Paananen, A., Bassioni, L. E., Nasr, E. M. E. M., Firstova, L., Zamiatina, N. A., Kutateladze, T., & Roivainen, M. (2010) · Virus Research · doi:10.1016/j.virusres.2010.05.006 · Cited by 22 · see citing works
Lau, S. K. P., Zhao, S., Sridhar, S., Yip, C. C., Aw‐Yong, K. L., Chow, E., Cheung, K. C. M., Hui, R. W., Leung, R. Y. H., Lai, Y. S. K., et al. (2018) · Journal of Clinical Virology · doi:10.1016/j.jcv.2018.09.002 · Cited by 22 · see citing works
Bentley, K., Alnaji, F. G., Woodford, L., Jones, S., Woodman, A., & Evans, D. J. (2021) · PLoS Pathogens · doi:10.1371/journal.ppat.1009676 · Cited by 22 · see citing works
Dedepsidis, E., Kyriakopoulou, Z., Pliaka, V., & Markoulatos, P. (2010) · Virus Genes · doi:10.1007/s11262-010-0512-5 · Cited by 22 · see citing works
Circulation of a type 1 recombinant vaccine-derived poliovirus strain in a limited area in Romania
Combiescu, M., Guillot, S., Persu, A., Băicuş, A., Pițigoi, D., Balanant, J., Oprişan, G., Crainic, R., Delpeyroux, F., & Aubert-Combiescu, A. (2006) · Archives of Virology · doi:10.1007/s00705-006-0884-y · Cited by 18 · see citing works
Self-citationGenome Instability in Picornaviruses
Agol, V. I. (2002) · Molecular Biology · doi:10.1023/a:1015317922221 · Cited by 18 · see citing works
Partial 3D gene sequences of Coxsackie viruses reveal interspecies exchanges
Bolanaki, E., Kottaridi, C., Markoulatos, P., Kyriakopoulou, Z., Margaritis, L. H., & Katsorchis, T. (2007) · Virus Genes · doi:10.1007/s11262-007-0083-2 · Cited by 16 · see citing works
Mechanisms Controlling Virulence Thresholds of Mixed Viral Populations
Lancaster, K. Z., & Pfeiffer, J. K. (2011) · Journal of Virology · doi:10.1128/jvi.00355-11 · Cited by 16 · see citing works
Zhang, Y., Zhang, F., Zhu, S., Chen, L., Yan, D., Wang, D., Tang, R., Zhu, H., Hou, X., An, H., et al. (2009) · Archives of Virology · doi:10.1007/s00705-009-0564-9 · Cited by 15 · see citing works
Romanenkova, N. I., Guillot, S., Rozaeva, N. R., Crainic, R., Александровна, Б. М., & Delpeyroux, F. (2006) · Journal of Clinical Microbiology · doi:10.1128/jcm.00017-06 · Cited by 16 · see citing works
Self-citationBoot, H. J., Kasteel, D., Buisman, A., & Kimman, T. G. (2003) · Journal of Virology · doi:10.1128/jvi.77.11.6541-6545.2003 · Cited by 16 · see citing works
Linsuwanon, P., Payungporn, S., Suwannakarn, K., Chieochansin, T., Theamboonlers, A., & Poovorawan, Y. (2011) · Virology Journal · doi:10.1186/1743-422x-8-5 · Cited by 15 · see citing works
Recombinant Sabin environmental isolates in Greece and Cyprus
Paximadi, E., Karakasiliοtis, I., Papaventsis, D. C., Papageorgiou, G. T., & Markoulatos, P. (2007) · Journal of Applied Microbiology · doi:10.1111/j.1365-2672.2007.03649.x · Cited by 15 · see citing works
Kitamura, K., & Shimizu, H. (2021) · Viruses · doi:10.3390/v13071407 · Cited by 14 · see citing works
Korotkova, E. A., Prostova, M. A., Gmyl, A. P., Kozlovskaya, L. I., Eremeeva, T. P., Baikova, O. Y., Krasota, A. Y., Morozova, N. S., & Ivanova, O. E. (2020) · Viruses · doi:10.3390/v12090970 · Cited by 14 · see citing works
Diverse Mechanisms of RNA Recombination
Gmyl, A. P., & Agol, V. I. (2005) · Molecular Biology · doi:10.1007/s11008-005-0069-x · Cited by 14 · see citing works
Multiple Genomic Recombination Events in the Evolution of Saffold Cardiovirus
Ren, L., Xiao, Y., Li, J., Chen, L., Zhang, J., Vernet, G., & Wang, J. (2013) · PLoS ONE · doi:10.1371/journal.pone.0074947 · Cited by 13 · see citing works
Kim, H.-J., Aponte-Diaz, D., Sotoudegan, M. S., Shengjuler, D., Arnold, J. J., & Cameron, C. E. (2023) · PLoS Biology · doi:10.1371/journal.pbio.3001693 · Cited by 12 · see citing works
Kyriakopoulou, Z., Dedepsidis, E., Pliaka, V., Tsakogiannis, D., Pratti, A., Levidiotou-Stefanou, S., & Markoulatos, P. (2010) · Journal of Clinical Microbiology · doi:10.1128/jcm.00475-09 · Cited by 13 · see citing works
Kyriakopoulou, Z., Dedepsidis, E., Pliaka, V., Mastorakos, P., Stamati, A., Pratti, A., Levidiotou-Stefanou, S., & Markoulatos, P. (2010) · Virus Genes · doi:10.1007/s11262-009-0446-y · Cited by 13 · see citing works
Pliaka, V., Dedepsidis, E., Kyriakopoulou, Z., Mpirli, K., Tsakogiannis, D., Pratti, A., Levidiotou-Stefanou, S., & Markoulatos, P. (2009) · Molecular and Cellular Probes · doi:10.1016/j.mcp.2009.11.003 · Cited by 10 · see citing works
- Authors
- Cuervo, N. S., Guillot, S., Romanenkova, N., Combiescu, M., Aubert-Combiescu, A., Seghier, M., Caro, V., Crainic, R., & Delpeyroux, F.
- Affiliations
- Institut Pasteur (FR)
- Saint Petersburg Pasteur Institute (RU)
- Institutul Cantacuzino (RO)
- Institut Pasteur d'Algérie (DZ)
- <!--label omitted: 1-->Epidémiologie Moléculaire des Entérovirus, Institut Pasteur, Paris, France1;
- Venue
- Journal of Virology
- Publisher
- American Society for Microbiology
- Published
- 2001-07
- Volume
- 75
- Issue
- 13
- Pages
- 5740-5751
- ISSN
- 0022-538X (ISSN-L)
- 1098-5514
- PMC
- PMC114290
- OpenAlex
- W1990942102
- Cited by
- 136
- References
- 52
- Citations by year
- 2025: 4 · 2024: 1 · 2023: 3 · 2022: 1 · 2021: 3 · 2020: 2 · 2019: 2 · 2018: 3 · 2017: 5 · 2016: 5 · 2015: 4 · 2014: 7 · 2013: 7 · 2012: 4
- FWCI
- 5.88
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Journal of Virology (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- World Health Organization
- European Commission
- Topics
- Health Sciences › Medicine › Cardiology and Cardiovascular Medicine › Viral Infections and Immunology Research
- Health Sciences › Medicine › Epidemiology › Virology and Viral Diseases
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Evolution and Genetic Dynamics
- Keywords
- trivalent oral polio vaccine, excretion kinetics, recombination junctions, non-structural proteins, poliovirus serotypes, co-infection, vaccine-associated paralytic poliomyelitis
- MeSH terms
- Animals, Chlorocebus aethiops, Child, Humans, Poliovirus Vaccine, Oral, Recombination, Genetic, Polymorphism, Restriction Fragment Length, RNA, Viral, Vero Cells, Genome, Viral, Poliovirus, Reverse Transcriptase Polymerase Chain Reaction
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