Functional Dynamics of the Gut Microbiome in Elderly People during Probiotic Consumption

<tt>edgeR</tt> : a Bioconductor package for differential expression analysis of digital gene expression data

Robinson, M. D., McCarthy, D. J., & Smyth, G. K. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btp616 · Cited by 41,364 · see citing works

QIIME allows analysis of high-throughput community sequencing data

Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., Fierer, N., Peña, A. G., Goodrich, J. K., Gordon, J. I., et al. (2010) · Nature Methods · doi:10.1038/nmeth.f.303 · Cited by 34,887 · see citing works

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.

Langmead, B., Trapnell, C., Pop, M., & Salzberg, S. L. (2009) · Genome Biology · doi:10.1186/gb-2009-10-3-r25 · Cited by 21,849 · see citing works

HTSeq—a Python framework to work with high-throughput sequencing data

Anders, S., Pyl, P. T., & Huber, W. (2015) · Bioinformatics · doi:10.1093/bioinformatics/btu638 · Cited by 21,464 · see citing works

Metagenomic biomarker discovery and explanation

Segata, N., Izard, J., Waldron, L., Gevers, D., Miropolsky, L., Garrett, W. S., & Huttenhower, C. (2011) · Genome Biology · doi:10.1186/gb-2011-12-6-r60 · Cited by 16,192 · see citing works

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Stamatakis, A. (2006) · Bioinformatics · doi:10.1093/bioinformatics/btl446 · Cited by 15,582 · see citing works

UCHIME improves sensitivity and speed of chimera detection

Edgar, R. C., Haas, B. J., Clemente, J. C., Quince, C., & Knight, R. (2011) · Bioinformatics · doi:10.1093/bioinformatics/btr381 · Cited by 15,114 · see citing works

Diet rapidly and reproducibly alters the human gut microbiome

David, L. A., Maurice, C. F., Carmody, R. N., Gootenberg, D. B., Button, J. E., Wolfe, B. E., Ling, A. V., Devlin, A. S., Varma, Y., Fischbach, M. A., et al. (2014) · Nature · doi:10.1038/nature12820 · Cited by 10,100 · see citing works

Fitting Linear Mixed-Effects Models Using lme4Preprint

Bates, D. M., Maechler, M., Bolker, B. M., & Walker, S. (2014) · arXiv (Cornell University) · doi:10.3929/ethz-b-000105397 · Cited by 9,435 · see citing works

A scaling normalization method for differential expression analysis of RNA-seq data

Robinson, M. D., & Oshlack, A. (2010) · Genome Biology · doi:10.1186/gb-2010-11-3-r25 · Cited by 7,876 · see citing works

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

Pruesse, E., Quast, C., Knittel, K., Fuchs, B. M., Ludwig, W., Peplies, J., & Glöckner, F. O. (2007) · Nucleic Acids Research · doi:10.1093/nar/gkm864 · Cited by 6,682 · see citing works

Diversity, stability and resilience of the human gut microbiota

Lozupone, C. A., Stombaugh, J. I., Gordon, J. I., Jansson, J. K., & Knight, R. (2012) · Nature · doi:10.1038/nature11550 · Cited by 5,533 · see citing works

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

McCarthy, D. J., Chen, Y., & Smyth, G. K. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks042 · Cited by 5,195 · see citing works

The KEGG resource for deciphering the genome

Kanehisa, M. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkh063 · Cited by 5,121 · see citing works

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

McDonald, D. T., Price, M. N., Goodrich, J. K., Nawrocki, E. P., DeSantis, T. Z., Probst, A. J., Andersen, G. L., Knight, R. D., & Hugenholtz, P. (2011) · The ISME Journal · doi:10.1038/ismej.2011.139 · Cited by 5,010 · see citing works

PyNAST: a flexible tool for aligning sequences to a template alignment

Caporaso, J. G., Bittinger, K. L., Bushman, F. D., DeSantis, T. Z., Andersen, G. L., & Knight, R. D. (2009) · Bioinformatics · doi:10.1093/bioinformatics/btp636 · Cited by 3,374 · see citing works

Gut microbiota composition correlates with diet and health in the elderly

Claesson, M. J., Jeffery, I. B., Conde, S., Power, S. E., O’Connor, E. M., Cusack, S., Harris, H. M. B., Coakley, M., Lakshminarayanan, B., O’Sullivan, O., et al. (2012) · Nature · doi:10.1038/nature11319 · Cited by 3,314 · see citing works

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

Peng, Y., Leung, H. C. M., Yiu, S., & Chin, F. Y. L. (2012) · Bioinformatics · doi:10.1093/bioinformatics/bts174 · Cited by 2,997 · see citing works

Ab initio gene identification in metagenomic sequences

Zhu, W., Lomsadze, A., & Borodovsky, M. Y. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq275 · Cited by 1,793 · see citing works

Composition, variability, and temporal stability of the intestinal microbiota of the elderly

Claesson, M. J., Cusack, S., O'Sullivan, O., Greene-Diniz, R., de Weerd, H., Flannery, E., Marchesi, J. R., Falush, D., Dinan, T., Fitzgerald, G., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1000097107 · Cited by 1,754 · see citing works

Through Ageing, and Beyond: Gut Microbiota and Inflammatory Status in Seniors and Centenarians

Biagi, E., Nylund, L., Candela, M., Ostan, R., Bucci, L., Pini, E., Nikkïla, J., Monti, D., Satokari, R., Franceschi, C., et al. (2010) · PLoS ONE · doi:10.1371/journal.pone.0010667 · Cited by 1,483 · see citing works

The Application of Ecological Theory Toward an Understanding of the Human Microbiome

Costello, E. K., Stagaman, K., Dethlefsen, L., Bohannan, B. J. M., & Relman, D. A. (2012) · Science · doi:10.1126/science.1224203 · Cited by 1,437 · see citing works

Host interactions of probiotic bacterial surface molecules: comparison with commensals and pathogens

Lebeer, S., Vanderleyden, J., & De Keersmaecker, S. C. J. (2010) · Nature Reviews Microbiology · doi:10.1038/nrmicro2297 · Cited by 1,062 · see citing works

Genomic variation landscape of the human gut microbiome

Schloissnig, S., Arumugam, M., Sunagawa, S., Mitreva, M., Tap, J., Zhu, A., Waller, A., Mende, D. R., Kultima, J. R., Martin, J., et al. (2013) · Nature · doi:10.1038/nature11711 · Cited by 907 · see citing works

Rfam 11.0: 10 years of RNA families

Burge, S., Daub, J., Eberhardt, R. Y., Tate, J. G., Barquist, L., Nawrocki, E. P., Eddy, S. R., Gardner, P. P., & Bateman, A. G. (2012) · Nucleic Acids Research · doi:10.1093/nar/gks1005 · Cited by 807 · see citing works

RNA Viral Community in Human Feces: Prevalence of Plant Pathogenic Viruses

Zhang, T., Breitbart, M., Lee, W. H., Run, J., Wei, C. L., Soh, S. W., Hibberd, M. L., Liu, E. T., Rohwer, F. L., & Ruan, Y. (2005) · PLoS Biology · doi:10.1371/journal.pbio.0040003 · Cited by 799 · see citing works

Comparative genomic analysis of <i>Lactobacillus rhamnosus</i> GG reveals pili containing a human- mucus binding protein

Kankainen, M., Paulin, L., Tynkkynen, S., von Ossowski, I., Reunanen, J., Partanen, P., Satokari, R., Vesterlund, S., Hendrickx, A. P. A., Lebeer, S., et al. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0908876106 · Cited by 740 · see citing works

Intestinal microbiota in human health and disease: the impact of probiotics

Gerritsen, J., Smidt, H., Rijkers, G. T., & de Vos, W. M. (2011) · Genes &amp; Nutrition · doi:10.1007/s12263-011-0229-7 · Cited by 724 · see citing works

Beneficial metabolic effects of a probiotic via butyrate-induced GLP-1 hormone secretion

Yadav, H., Lee, J.-H., Lloyd, J., Walter, P., & Rane, S. G. (2013) · Journal of Biological Chemistry · doi:10.1074/jbc.m113.452516 · Cited by 709 · see citing works

Emerging molecular insights into the interaction between probiotics and the host intestinal mucosa

Bron, P. A., van Baarlen, P., & Kleerebezem, M. (2012) · Nature Reviews Microbiology · doi:10.1038/nrmicro2690 · Cited by 690 · see citing works

The Impact of a Consortium of Fermented Milk Strains on the Gut Microbiome of Gnotobiotic Mice and Monozygotic Twins

McNulty, N. P., Yatsunenko, T., Hsiao, A., Faith, J. J., Muegge, B. D., Goodman, A. L., Henrissat, B., Oozeer, R., Cools-Portier, S., Gobert, G., et al. (2011) · Science Translational Medicine · doi:10.1126/scitranslmed.3002701 · Cited by 544 · see citing works

An update on the use and investigation of probiotics in health and disease

Sanders, M. E., Guarner, F., Guerrant, R., Holt, P. R., Quigley, E. M., Sartor, R. B., Sherman, P. M., & Mayer, E. A. (2013) · Gut · doi:10.1136/gutjnl-2012-302504 · Cited by 503 · see citing works

Metatranscriptomic Approach to Analyze the Functional Human Gut Microbiota

Gosalbes, M. J., Durbán, A., Pignatelli, M., Abellan, J. J., Jiménez‐Hernández, N., Pérez‐Cobas, A. E., Latorre, A., & Moyá, A. (2011) · PLoS ONE · doi:10.1371/journal.pone.0017447 · Cited by 379 · see citing works

Regulation of intestinal homeostasis and immunity with probiotic lactobacilli

van Baarlen, P., Wells, J. M., & Kleerebezem, M. (2013) · Trends in Immunology · doi:10.1016/j.it.2013.01.005 · Cited by 369 · see citing works

Tackling soil diversity with the assembly of large, complex metagenomes

Howe, A. C., Jansson, J. K., Malfatti, S., Tringe, S. G., Tiedje, J. M., & Brown, C. T. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1402564111 · Cited by 322 · see citing works

Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes

Giannoukos, G., Ciulla, D., Huang, K. H., Haas, B. J., Izard, J., Levin, J. Z., Livny, J., Earl, A. M., Gevers, D., Ward, D. V., et al. (2012) · Genome biology · doi:10.1186/gb-2012-13-3-r23 · Cited by 263 · see citing works

Lactocepin Secreted By Lactobacillus Exerts Anti-Inflammatory Effects By Selectively Degrading Proinflammatory Chemokines

von Schillde, M., Hörmannsperger, G., Weiher, M., Alpert, C.-A., Hahne, H., Bäuerl, C., Huynegem, K. V., Steidler, L., Hrnčíř, T., Pérez‐Martínez, G., et al. (2012) · Cell Host & Microbe · doi:10.1016/j.chom.2012.02.006 · Cited by 235 · see citing works

A Reference-Free Algorithm for Computational Normalization of Shotgun Sequencing DataPreprint

Brown, C. T., Howe, A., Zhang, Q., Pyrkosz, A. B., & Brom, T. H. (2012) · arXiv (Cornell University) · doi:10.48550/arxiv.1203.4802 · Cited by 233 · see citing works

Isolation of DNA from bacterial samples of the human gastrointestinal tract

Zoetendal, E. G., Heilig, H. G. H. J., Klaassens, E. S., Booijink, C. C., Kleerebezem, M., Smidt, H., & de Vos, W. M. (2006) · Nature Protocols · doi:10.1038/nprot.2006.142 · Cited by 224 · see citing works

Role of β-hydroxybutyrate, its polymer poly-β-hydroxybutyrate and inorganic polyphosphate in mammalian health and disease

Dedkova, E. N., & Blatter, L. A. (2014) · Frontiers in Physiology · doi:10.3389/fphys.2014.00260 · Cited by 220 · see citing works

Microbial community dynamics in a seasonally anoxic fjord: Saanich Inlet, British Columbia

Zaikova, E., Walsh, D. A., Stilwell, C. P., Mohn, W. W., Tortell, P. D., & Hallam, S. (2009) · Environmental Microbiology · doi:10.1111/j.1462-2920.2009.02058.x · Cited by 211 · see citing works

The Human Microbiome: From Symbiosis to Pathogenesis

Eloe‐Fadrosh, E. A., & Rasko, D. A. (2013) · Annual Review of Medicine · doi:10.1146/annurev-med-010312-133513 · Cited by 210 · see citing works

Crystal structure of the Escherichia coli Rob transcription factor in complex with DNA.

Ellenberger, T. E., Kwon, H. J., Bennik, M. H. J., & Demple, B. (2000) · Nature Structural Biology · doi:10.1038/75213 · Cited by 200 · see citing works

Expression patterns reveal niche diversification in a marine microbial assemblage

Gifford, S., Sharma, S., Booth, M. G., & Moran, M. A. (2012) · The ISME Journal · doi:10.1038/ismej.2012.96 · Cited by 200 · see citing works

Associations between the human intestinal microbiota, Lactobacillus rhamnosus GG and serum lipids indicated by integrated analysis of high-throughput profiling data

Lahti, L., Salonen, A., Kekkonen, R. A., Salojärvi, J., Jalanka, J., Palva, A., Orešič, M., & de Vos, W. M. (2013) · PeerJ · doi:10.7717/peerj.32 · Cited by 196 · see citing works

Probiotic-Derived Polyphosphate Enhances the Epithelial Barrier Function and Maintains Intestinal Homeostasis through Integrin–p38 MAPK Pathway

Segawa, S., Fujiya, M., Konishi, H., Ueno, N., Kobayashi, N., Shigyo, T., & Kohgo, Y. (2011) · PLoS ONE · doi:10.1371/journal.pone.0023278 · Cited by 186 · see citing works

Comparative Genomic and Functional Analysis of Lactobacillus casei and Lactobacillus rhamnosus Strains Marketed as Probiotics

Douillard, F. ⁄. O. P., Ribbera, A., rvinen, H. M. J. ⁄., Kant, R., ⁄, T. E. P., Randazzo, C. L., Paulin, L. G., Laine, P., Caggia, C., von Ossowski, I., et al. (2013) · Applied and Environmental Microbiology · doi:10.1128/aem.03467-12 · Cited by 126 · see citing works

Isolation of RNA from bacterial samples of the human gastrointestinal tract

Zoetendal, E. G., Booijink, C. C., Klaassens, E. S., Heilig, H. G. H. J., Kleerebezem, M., Smidt, H., & de Vos, W. M. (2006) · Nature Protocols · doi:10.1038/nprot.2006.143 · Cited by 105 · see citing works

Impact of Oral Typhoid Vaccination on the Human Gut Microbiota and Correlations with S. Typhi-Specific Immunological Responses

Eloe‐Fadrosh, E. A., McArthur, M. A., Seekatz, A. M., Drábek, E. F., Rasko, D. A., Sztein, M. B., & Fraser, C. M. (2013) · PLoS ONE · doi:10.1371/journal.pone.0062026 · Cited by 104 · see citing works

Community Health Care: Therapeutic Opportunities in the Human Microbiome

Sonnenburg, J. L., & Fischbach, M. A. (2011) · Science Translational Medicine · doi:10.1126/scitranslmed.3001626 · Cited by 102 · see citing works

Pro-Inflammatory Flagellin Proteins of Prevalent Motile Commensal Bacteria Are Variably Abundant in the Intestinal Microbiome of Elderly Humans

Neville, B. A., Sheridan, P. O., Harris, H. M. B., Coughlan, S., Flint, H. J., Duncan, S. H., Jeffery, I. B., Claesson, M. J., Ross, R. P., Scott, K. P., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0068919 · Cited by 62 · see citing works

No Evidence of Harms of Probiotic Lactobacillus rhamnosus GG ATCC 53103 in Healthy Elderly—A Phase I Open Label Study to Assess Safety, Tolerability and Cytokine Responses

Hibberd, P. L., Kleimola, L., Fiorino, A., Botelho, C. A., Haverkamp, M. R., Andreyeva, I., Poutsiaka, D. D., Fraser, C. M., Solano-Aguilar, G. I., & Snydman, D. R. (2014) · PLoS ONE · doi:10.1371/journal.pone.0113456 · Cited by 52 · see citing works

FISH analysis of Lactobacillus biofilms in the gastrointestinal tract of different hosts

Lebeer, S., Verhoeven, T. L. A., Claes, I. J. J., Hertogh, G., Vermeire, S., Buyse, J., Immerseel, F. V., Vanderleyden, J., & Keersmaecker, S. C. J. D. (2010) · Letters in Applied Microbiology · doi:10.1111/j.1472-765x.2010.02994.x · Cited by 49 · see citing works

Circleator: flexible circular visualization of genome-associated data with BioPerl and SVG

Crabtree, J., Agrawal, S., Mahurkar, A., Myers, G. S. A., Rasko, D. A., & White, O. R. (2014) · Bioinformatics · doi:10.1093/bioinformatics/btu505 · Cited by 36 · see citing works

Influence of diet on the gut microbiome and implications for human health

Singh, R. K., Chang, H.-W., Yan, D., Lee, K. M., Ucmak, D., Wong, K., Abrouk, M., Farahnik, B., Nakamura, M., Zhu, T. H., et al. (2017) · Journal of Translational Medicine · doi:10.1186/s12967-017-1175-y · Cited by 2,599 · see citing works

Bifidobacteria and Butyrate-Producing Colon Bacteria: Importance and Strategies for Their Stimulation in the Human Gut

Rivière, A., Selak, M., Lantin, D., Leroy, F., & Vuyst, L. D. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.00979 · Cited by 1,746 · see citing works

Personalized Gut Mucosal Colonization Resistance to Empiric Probiotics Is Associated with Unique Host and Microbiome Features

Zmora, N., Zilberman-Schapira, G., Suez, J., Mor, U., Dori-Bachash, M., Bashiardes, S., Kotler, E., Zur, M., Regev-Lehavi, D., Brik, R. B.-Z., et al. (2018) · Cell · doi:10.1016/j.cell.2018.08.041 · Cited by 1,695 · see citing works

The central nervous system and the gut microbiome

Sharon, G., Sampson, T. R., Geschwind, D. H., & Mazmanian, S. K. (2016) · Cell · doi:10.1016/j.cell.2016.10.027 · Cited by 1,513 · see citing works

The pros, cons, and many unknowns of probiotics

Suez, J., Zmora, N., Segal, E., & Elinav, E. (2019) · Nature Medicine · doi:10.1038/s41591-019-0439-x · Cited by 1,398 · see citing works

The gut microbiome as a modulator of healthy ageing

Ghosh, T. S., Shanahan, F., & O’Toole, P. W. (2022) · Nature Reviews Gastroenterology &amp; Hepatology · doi:10.1038/s41575-022-00605-x · Cited by 817 · see citing works

The role of the gut microbiome and its metabolites in metabolic diseases

Wu, J., Wang, K., Wang, X., Pang, Y., & Jiang, C. (2020) · Protein & Cell · doi:10.1007/s13238-020-00814-7 · Cited by 584 · see citing works

Gut microbiota, obesity and diabetes

Patterson, E., Ryan, P. M., Cryan, J. F., Dinan, T. G., Ross, R. P., Fitzgerald, G. F., & Stanton, C. (2016) · Postgraduate Medical Journal · doi:10.1136/postgradmedj-2015-133285 · Cited by 552 · see citing works

Gut microbiota: A player in aging and a target for anti-aging intervention

Vaiserman, A. M., Koliada, A. K., & Marotta, F. (2017) · Ageing Research Reviews · doi:10.1016/j.arr.2017.01.001 · Cited by 465 · see citing works

Gut Microbiota Contribute to Age-Related Changes in Skeletal Muscle Size, Composition, and Function: Biological Basis for a Gut-Muscle Axis

Grosicki, G. J., Fielding, R. A., & Lustgarten, M. S. (2018) · Calcified Tissue International · doi:10.1007/s00223-017-0345-5 · Cited by 388 · see citing works

Thirty Years of Lactobacillus rhamnosus GG

Capurso, L. (2019) · Journal of Clinical Gastroenterology · doi:10.1097/mcg.0000000000001170 · Cited by 385 · see citing works

Human-origin probiotic cocktail increases short-chain fatty acid production via modulation of mice and human gut microbiome

Nagpal, R., Wang, S., Ahmadi, S., Hayes, J., Gagliano, J., Subashchandrabose, S., Kitzman, D. W., Becton, T., Read, R., & Yadav, H. (2018) · Scientific Reports · doi:10.1038/s41598-018-30114-4 · Cited by 355 · see citing works

Vitamin B12 produced by Cetobacterium somerae improves host resistance against pathogen infection through strengthening the interactions within gut microbiota

Qi, X., Zhang, Y., Zhang, Y., Luo, F., Song, K., Wang, G., & Ling, F. (2023) · Microbiome · doi:10.1186/s40168-023-01574-2 · Cited by 302 · see citing works

Establishing What Constitutes a Healthy Human Gut Microbiome: State of the Science, Regulatory Considerations, and Future Directions

McBurney, M. I., Davis, C. D., Fraser, C. M., Schneeman, B. O., Huttenhower, C., Verbeke, K., Walter, J., & Latulippe, M. E. (2019) · Journal of Nutrition · doi:10.1093/jn/nxz154 · Cited by 283 · see citing works

Probiotic Bifidobacterium lactis V9 Regulates the Secretion of Sex Hormones in Polycystic Ovary Syndrome Patients through the Gut-Brain Axis

Zhang, J., Sun, Z., Jiang, S., Bai, X., Ma, C., Peng, Q., Chen, K., Chang, H., Fang, T., & Zhang, H. (2019) · mSystems · doi:10.1128/msystems.00017-19 · Cited by 287 · see citing works

Effects of probiotics on body weight, body mass index, fat mass and fat percentage in subjects with overweight or obesity: A systematic review and meta-analysis of randomized controlled trials

Borgeraas, H., Johnson, L. K., Skattebu, J., Hertel, J. K., & Hjelmesæth, J. (2018) · Obesity Reviews · doi:10.1111/obr.12626 · Cited by 278 · see citing works

Microbiota in the Gastrointestinal Tract

Dieterich, W., Schink, M., & Zopf, Y. (2018) · Medical Sciences · doi:10.3390/medsci6040116 · Cited by 269 · see citing works

Ecological robustness of the gut microbiota in response to ingestion of transient food-borne microbes

Zhang, C., Derrien, M., Levenez, F., Brazeilles, R., Ballal, S. A., Kim, J., Degivry, M.-C., Quéré, G., Garault, P., van Hylckama Vlieg, J. E. T., et al. (2016) · The ISME Journal · doi:10.1038/ismej.2016.13 · Cited by 264 · see citing works

Probiotics impact the antibiotic resistance gene reservoir along the human GI tract in a person-specific and antibiotic-dependent manner

Montassier, E., Valdés-Mas, R., Batard, E., Zmora, N., Dori-Bachash, M., Suez, J., & Elinav, E. (2021) · Nature Microbiology · doi:10.1038/s41564-021-00920-0 · Cited by 256 · see citing works

Gut feelings: a randomised, triple-blind, placebo-controlled trial of probiotics for depressive symptoms

Chahwan, B., Kwan, S., Isik, A., van Hemert, S., Burke, C., & Roberts, L. (2019) · Journal of Affective Disorders · doi:10.1016/j.jad.2019.04.097 · Cited by 256 · see citing works

Effects of dietary Lactobacillus rhamnosus JCM1136 and Lactococcus lactis subsp. lactis JCM5805 on the growth, intestinal microbiota, morphology, immune response and disease resistance of juvenile Nile tilapia, Oreochromis niloticus

Xia, Y. L., Lu, M., Chen, G., Cao, J., Gao, F., Wang, M., Liu, Z., Zhang, D., Zhu, H., & Yi, M. (2018) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2018.03.020 · Cited by 243 · see citing works

Oral treatment with Lactobacillus rhamnosus attenuates behavioural deficits and immune changes in chronic social stress

Bharwani, A., Mian, M. F., Surette, M. G., Bienenstock, J., & Forsythe, P. (2017) · BMC Medicine · doi:10.1186/s12916-016-0771-7 · Cited by 236 · see citing works

Clinical Uses of Probiotics

Islam, S. U. (2016) · Medicine · doi:10.1097/md.0000000000002658 · Cited by 220 · see citing works

The human gut microbiome in health: Establishment and resilience of microbiota over a lifetime

Greenhalgh, K., Meyer, K. M., Aagaard, K. M., & Wilmes, P. (2016) · Environmental Microbiology · doi:10.1111/1462-2920.13318 · Cited by 218 · see citing works

Gut Dysbiosis and Muscle Aging: Searching for Novel Targets against Sarcopenia

Picca, A., Fanelli, F., Calvani, R., Mulè, G., Pesce, V., Sisto, A., Pantanelli, C., Bernabei, R., Landi, F., & Marzetti, E. (2018) · Mediators of Inflammation · doi:10.1155/2018/7026198 · Cited by 181 · see citing works

Host microbiota can facilitate pathogen infection

Stevens, E. J., Bates, K. A., & King, K. C. (2021) · PLoS Pathogens · doi:10.1371/journal.ppat.1009514 · Cited by 161 · see citing works

Impact of probiotic supplements on microbiome diversity following antibiotic treatment of mice

Grazul, H., Kanda, L. L., & Gondek, D. (2016) · Gut Microbes · doi:10.1080/19490976.2016.1138197 · Cited by 135 · see citing works

Fungal Chitin Induces Trained Immunity in Human Monocytes during Cross-talk of the Host with Saccharomyces cerevisiae

Rizzetto, L., Ifrim, D. C., Moretti, S., Tocci, N., Cheng, S., Quintin, J., Renga, G., Oikonomou, V., Filippo, C. D., Weil, T., et al. (2016) · Journal of Biological Chemistry · doi:10.1074/jbc.m115.699645 · Cited by 132 · see citing works

Influence of low FODMAP and gluten-free diets on disease activity and intestinal microbiota in patients with non-celiac gluten sensitivity

Dieterich, W., Schuppan, D., Schink, M., Schwappacher, R., Wirtz, S. J., Agaimy, A., Neurath, M. F., & Zopf, Y. (2018) · Clinical Nutrition · doi:10.1016/j.clnu.2018.03.017 · Cited by 132 · see citing works

Understanding dysbiosis and resilience in the human gut microbiome: biomarkers, interventions, and challenges

Safarchi, A., Al-Qadami, G. H., Tran, C. D., & Conlon, M. A. (2025) · Frontiers in Microbiology · doi:10.3389/fmicb.2025.1559521 · Cited by 133 · see citing works

Probiotic yogurt and acidified milk similarly reduce postprandial inflammation and both alter the gut microbiota of healthy, young men

Burton, K. J., Rosikiewicz, M., Pimentel, G., Bütikofer, U., von Ah, U., Voirol, M.-J., Croxatto, A., Aeby, S., Drai, J., McTernan, P. G., et al. (2017) · British Journal of Nutrition · doi:10.1017/s0007114517000885 · Cited by 121 · see citing works

Effect of sub-chronic exposure to lead (Pb) and Bacillus subtilis on Carassius auratus gibelio: Bioaccumulation, antioxidant responses and immune responses

Yin, Y., Zhang, P., Yue, X., Du, X., Li, W., Yin, Y., Yi, C., & Li, Y. (2018) · Ecotoxicology and Environmental Safety · doi:10.1016/j.ecoenv.2018.06.056 · Cited by 120 · see citing works

Differential Effects of Escherichia coli Nissle and Lactobacillus rhamnosus Strain GG on Human Rotavirus Binding, Infection, and B Cell Immunity

Kandasamy, S., Vlasova, A. N., Fischer, D. D., Kumar, A., Chattha, K. S., Rauf, A., Shao, L., Langel, S. N., Rajashekara, G., & Saif, L. J. (2016) · The Journal of Immunology · doi:10.4049/jimmunol.1501705 · Cited by 113 · see citing works

The gut microbiota and graft-versus-host disease

Fredricks, D. N. (2019) · Journal of Clinical Investigation · doi:10.1172/jci125797 · Cited by 112 · see citing works

Translating Omics to Food Microbiology

Walsh, A. M., Crispie, F., Claesson, M. J., & Cotter, P. D. (2017) · Annual Review of Food Science and Technology · doi:10.1146/annurev-food-030216-025729 · Cited by 110 · see citing works

Gut Microbiota Interaction with the Central Nervous System throughout Life

Ojeda, J., Ávila, A., & Vidal, P. M. (2021) · Journal of Clinical Medicine · doi:10.3390/jcm10061299 · Cited by 107 · see citing works

Lactobacillus reuteri I5007 Modulates Intestinal Host Defense Peptide Expression in the Model of IPEC-J2 Cells and Neonatal Piglets

Liu, H., Hou, C., Wang, G., Jia, H., Yu, H., Zeng, X., Thacker, P. A., Zhang, G., & Qiao, S. (2017) · Nutrients · doi:10.3390/nu9060559 · Cited by 95 · see citing works

Not All Fibers Are Born Equal; Variable Response to Dietary Fiber Subtypes in IBD

Armstrong, H., Mander, I. K., Zhang, Z., Armstrong, D. W. J., & Wine, E. (2021) · Frontiers in Pediatrics · doi:10.3389/fped.2020.620189 · Cited by 92 · see citing works

Long-term treatment with green tea polyphenols modifies the gut microbiome of female sprague-dawley rats

Wang, J., Tang, L., Zhou, J., Zhou, J., Glenn, T. C., Shen, C., & Wang, J.-S. (2018) · The Journal of Nutritional Biochemistry · doi:10.1016/j.jnutbio.2018.01.005 · Cited by 89 · see citing works

Interventions on Gut Microbiota for Healthy Aging

Zeppa, S. D., Agostini, D., Ferrini, F., Gervasi, M., Barbieri, E., Bartolacci, A., Piccoli, G., Saltarelli, R., Sestili, P., & Stocchi, V. (2022) · Cells · doi:10.3390/cells12010034 · Cited by 91 · see citing works

Precision nutrition and the microbiome part II: potential opportunities and pathways to commercialisation

Mills, S., Lane, J. A., Smith, G. J., Grimaldi, K. A., Ross, R. P., & Stanton, C. (2019) · Nutrients · doi:10.3390/nu11071468 · Cited by 88 · see citing works

The microbiota-gut-brain axis: Focus on the fundamental communication pathways

Bistoletti, M., Bosi, A., Banfi, D., Giaroni, C., & Baj, A. (2020) · Progress in molecular biology and translational science · doi:10.1016/bs.pmbts.2020.08.012 · Cited by 88 · see citing works

Synbiotic encapsulation of probiotic Latobacillus plantarum by alginate -arabinoxylan composite microspheres

Wu, Y., & Zhang, G. (2018) · LWT · doi:10.1016/j.lwt.2018.03.034 · Cited by 83 · see citing works

Probiotics in the next-generation sequencing era

Suez, J., Zmora, N., & Elinav, E. (2019) · Gut Microbes · doi:10.1080/19490976.2019.1586039 · Cited by 82 · see citing works

Probiotic Supplementation and Micronutrient Status in Healthy Subjects: A Systematic Review of Clinical Trials

Barkhidarian, B., Roldos, L., Iskandar, M. M., Saedisomeolia, A., & Kubow, S. J. (2021) · Nutrients · doi:10.3390/nu13093001 · Cited by 77 · see citing works

Effects of synbiotic fermented milk containing Lactobacillus acidophilus La-5 and Bifidobacterium animalis ssp. lactis BB-12 on the fecal microbiota of adults with irritable bowel syndrome: A randomized double-blind, placebo-controlled trial

Matijašić, B. B., Obermajer, T., Lipoglavšek, L., Sernel, T., Locatelli, I., Kos, M., Šmid, A., & Rogelj, I. (2016) · Journal of Dairy Science · doi:10.3168/jds.2015-10743 · Cited by 79 · see citing works

Gleaning Insights from Fecal Microbiota Transplantation and Probiotic Studies for the Rational Design of Combination Microbial Therapies

Hudson, L. E., Anderson, S. E., Corbett, A. H., & Lamb, T. J. (2016) · Clinical Microbiology Reviews · doi:10.1128/cmr.00049-16 · Cited by 76 · see citing works

Whole-Grain Rye and Wheat Affect Some Markers of Gut Health without Altering the Fecal Microbiota in Healthy Overweight Adults: A 6-Week Randomized Trial

Vuholm, S., Nielsen, D. S., Iversen, K., Suhr, J., Westermann, P., Krych, Ł., Andersen, J. R., & Kristensen, M. (2017) · Journal of Nutrition · doi:10.3945/jn.117.250647 · Cited by 74 · see citing works

A Commensal Bifidobacterium longum Strain Prevents Gluten-Related Immunopathology in Mice through Expression of a Serine Protease Inhibitor

McCarville, J. L., Dong, J., Caminero, A., Bermudez-Brito, M., Jury, J., Murray, J. A., Duboux, S., Steinmann, M., Delley, M., Tangyu, M., et al. (2017) · Applied and Environmental Microbiology · doi:10.1128/aem.01323-17 · Cited by 71 · see citing works

Probiotics and microbiota composition

Sanders, M. E. (2016) · BMC Medicine · doi:10.1186/s12916-016-0629-z · Cited by 72 · see citing works

Role of Probiotics, Prebiotics, and Synbiotics in the Elderly: Insights Into Their Applications

Ale, E. C., & Binetti, A. G. (2021) · Frontiers in Microbiology · doi:10.3389/fmicb.2021.631254 · Cited by 64 · see citing works

Major Depressive Disorder and gut microbiota – Association not causation. A scoping review

Łoniewski, I., Misera, A., Skonieczna‐Żydecka, K., Kaczmarczyk, M., Kaźmierczak-Siedlecka, K., Misiak, B., Marlicz, W. M., & Samochowiec, J. (2020) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/j.pnpbp.2020.110111 · Cited by 63 · see citing works

Long-term safety assessment in children who received hydrolyzed protein formulas with Lactobacillus rhamnosus GG: a 5-year follow-up

Scalabrin, D., Harris, C. L., Johnston, W., & Berseth, C. L. (2016) · European Journal of Pediatrics · doi:10.1007/s00431-016-2825-4 · Cited by 61 · see citing works

Effect of probiotic yoghurt on animal-based diet-induced change in gut microbiota: an open, randomised, parallel-group study

Odamaki, T., Kato, K., Sugahara, H., Xiao, J., Abe, F., & Benno, Y. (2016) · Beneficial Microbes · doi:10.3920/bm2015.0173 · Cited by 59 · see citing works

Effect of Bacillus cereus against cadmium induced hematological disturbances and immunosuppression in Carassius auratus gibelio

Wang, N., Gao, C., Zhang, P., Guan, L., Wang, Y., Qin, Y., & Li, Y. (2019) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2019.03.047 · Cited by 57 · see citing works

Bioactive compounds of foods: Phytochemicals and peptides

Xavier, J. R., Sanjay, B. S., Gupta, D., Mehta, S., & Chauhan, O. P. (2024) · Food and Humanity · doi:10.1016/j.foohum.2024.100354 · Cited by 52 · see citing works

Bifidobacterium adolescentis supplementation attenuates fracture-induced systemic sequelae

Roberts, J. L., Liu, G., Darby, T. M., Fernandes, L. M., Díaz‐Hernández, M. E., Jones, R. M., & Drissi, H. (2020) · Biomedicine & Pharmacotherapy · doi:10.1016/j.biopha.2020.110831 · Cited by 52 · see citing works

Intranasal Bacterial Therapeutics Reduce Colonization by the Respiratory Pathogen Mannheimia haemolytica in Dairy Calves

Amat, S., Alexander, T. W., Holman, D. B., Schwinghamer, T. D., & Timsit, E. (2020) · mSystems · doi:10.1128/msystems.00629-19 · Cited by 47 · see citing works

Antibiotic-induced dysbiosis of the rat oral and gut microbiota and resistance to Salmonella

Wu, H., Ma, Y., Peng, X., Qiu, W., Kong, L., Ren, B., Li, M., Cheng, G., Zhou, X., & Cheng, L. (2020) · Archives of Oral Biology · doi:10.1016/j.archoralbio.2020.104730 · Cited by 47 · see citing works

A Survey on Antimicrobial Resistance Genes of Frequently Used Probiotic Bacteria, 1901 to 2022

Tóth, A. G., Judge, M. F., Nagy, S. Á., Papp, M., & Solymosi, N. (2023) · Eurosurveillance · doi:10.2807/1560-7917.es.2023.28.14.2200272 · Cited by 46 · see citing works

Probiotic strains and mechanistic insights for the treatment of type 2 diabetes

Hampe, C. S., & Roth, C. L. (2017) · Endocrine · doi:10.1007/s12020-017-1433-z · Cited by 45 · see citing works

Single-strain starter experimental cheese reveals anti-inflammatory effect of Propionibacterium freudenreichii CIRM BIA 129 in TNBS-colitis model

Plé, C., Richoux, R., Jardin, J., Nurdin, M., Briard‐Bion, V., Parayre, S., Ferreira, S., Pot, B., Bouguen, G., Deutsch, S., et al. (2015) · Journal of Functional Foods · doi:10.1016/j.jff.2015.08.015 · Cited by 44 · see citing works

Exploring the Preventive Effect and Mechanism of Senile Sarcopenia Based on “Gut–Muscle Axis”

Liao, X., Wu, M., Hao, Y., & Hong, D. (2020) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2020.590869 · Cited by 44 · see citing works

Lactobacillus rhamnosus GG Colonization in Early Life Ameliorates Inflammaging of Offspring by Activating SIRT1/AMPK/PGC‐1α Pathway

Liu, T., Song, X., An, Y., Wu, X., Zhang, W., Li, J., Sun, Y., Jin, G., Liu, X., Guo, Z., et al. (2021) · Oxidative Medicine and Cellular Longevity · doi:10.1155/2021/3328505 · Cited by 42 · see citing works

Investigating association between gut microbiota and sarcopenia-related traits: a Mendelian randomization study

Zhao, J., Liang, R., Song, Q., Song, S., Yue, J., & Wu, C. (2023) · Precision Clinical Medicine · doi:10.1093/pcmedi/pbad010 · Cited by 38 · see citing works

Treatment With Multi-Species Probiotics Changes the Functions, Not the Composition of Gut Microbiota in Postmenopausal Women With Obesity: A Randomized, Double-Blind, Placebo-Controlled Study

Kaczmarczyk, M., Szulińska, M., Łoniewski, I., Kręgielska-Narożna, M., Skonieczna‐Żydecka, K., Kościółek, T., Bezshapkin, V., & Bogdański, P. (2022) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2022.815798 · Cited by 40 · see citing works

Bifidobacterium longum supplementation improves age‐related delays in fracture repair

Roberts, J. L., Golloshi, M., Harding, D. B., Conduah, M., Liu, G., & Drissi, H. (2023) · Aging Cell · doi:10.1111/acel.13786 · Cited by 37 · see citing works

Metabolic fluorine labeling and hotspot imaging of dynamic gut microbiota in mice

Chen, D., Guo, J., Li, A., Sun, C., Lin, H., Lin, H., Yang, C. J., Wang, W., & Gao, J. (2023) · Science Advances · doi:10.1126/sciadv.abg6808 · Cited by 37 · see citing works

Recent Advances in Anti-Aging Medicine

Son, D., Park, W.-J., & Lee, Y. (2019) · Korean Journal of Family Medicine · doi:10.4082/kjfm.19.0087 · Cited by 37 · see citing works

Lactococcus lactis NCDO2118 exerts visceral antinociceptive properties in rat via GABA production in the gastro-intestinal tract

Laroute, V., Beaufrand, C., Gomes, P., Nouaille, S., Tondereau, V., Daveran‐Mingot, M., Théodorou, V., Eutamène, H., Mercier‐Bonin, M., & Cocaign‐Bousquet, M. (2022) · eLife · doi:10.7554/elife.77100 · Cited by 37 · see citing works

Safety and functional enrichment of gut microbiome in healthy subjects consuming a multi-strain fermented milk product: a randomised controlled trial

Alvarez, A.-S., Tap, J., Chambaud, I., Cools-Portier, S., Quinquis, L., Bourlioux, P., Marteau, P., Guillemard, E., Schrezenmeir, J., & Derrien, M. (2020) · Scientific Reports · doi:10.1038/s41598-020-72161-w · Cited by 36 · see citing works

The microbiome: An actor or stage for the beneficial action of probiotics, prebiotics, synbiotics, and postbiotics?

Sanders, M. E., & Hill, C. (2025) · Cell Host & Microbe · doi:10.1016/j.chom.2025.04.017 · Cited by 36 · see citing works

Effect of Psychobiotics on Psychometric Tests and Inflammatory Markers in Major Depressive Disorder: Meta-Analysis of Randomized Controlled Trials with Meta-Regression

Misera, A., Liśkiewicz, P., Łoniewski, I., Skonieczna-Żydecka, K., & Samochowiec, J. (2021) · Pharmaceuticals · doi:10.3390/ph14100952 · Cited by 34 · see citing works

The Effect of Lactobacillus casei 32G on the Mouse Cecum Microbiota and Innate Immune Response Is Dose and Time Dependent

Aktaş, B., Wolfe, T. J. D., Tandee, K., Safdar, N., Darien, B. J., & Steele, J. L. (2015) · PLoS ONE · doi:10.1371/journal.pone.0145784 · Cited by 34 · see citing works

Probiotic research priorities for the healthy adult population: A review on the health benefits of Lactobacillus rhamnosus GG and Bifidobacterium animalis subspecies lactis BB-12

Flach, J., van der Waal, M. B., Kardinaal, A. F. M., Schloesser, J. E. L., Ruijschop, R. M. A. J., & Claassen, E. (2018) · Cogent Food & Agriculture · doi:10.1080/23311932.2018.1452839 · Cited by 34 · see citing works

Microbiota Targeted Interventions of Probiotic Lactobacillus as an Anti-Ageing Approach: A Review

Ishaq, M., Khan, A., Bacha, A. S., Shah, T., Hanif, A., Ahmad, A. A., Ke, W., Li, F., Din, A. U., Ding, Z., et al. (2021) · Antioxidants · doi:10.3390/antiox10121930 · Cited by 34 · see citing works

Nutrient pollution alters the gut microbiome of a territorial reef fish

Degregori, S., Casey, J. M., & Barber, P. H. (2021) · Marine Pollution Bulletin · doi:10.1016/j.marpolbul.2021.112522 · Cited by 33 · see citing works

Selenium-enriched Bacillus subtilis reduces the effects of mercury-induced on inflammation and intestinal microbes in carp (Cyprinus carpio var. specularis)

Shang, X., Wang, B., Sun, Q., Zhang, Y., Lu, Y., Liu, S., & Li, Y. (2022) · Fish Physiology and Biochemistry · doi:10.1007/s10695-022-01046-8 · Cited by 33 · see citing works

Gut Microbiota Alteration After Long-Term Consumption of Probiotics in the Elderly

Gao, R., Zhang, X., Huang, L., Shen, R., & Qin, H. (2018) · Probiotics and Antimicrobial Proteins · doi:10.1007/s12602-018-9403-1 · Cited by 32 · see citing works

Origination, change, and modulation of geriatric disease-related gut microbiota during life

Rajoka, M. S. R., Zhao, H., Li, N., Lu, Y. P., Lian, Z., Shao, D., Jin, M., Li, Q., Zhao, L., & Shi, J. (2018) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-018-9264-2 · Cited by 32 · see citing works

Probiotics and Prebiotics

Sanders, M. E., Goh, Y. J., & Klaenhammer, T. R. (2019) · ASM Press eBooks · doi:10.1128/9781555819972.ch32 · Cited by 32 · see citing works

Message in a Bottle: Dialog between Intestine and Skin Modulated by Probiotics

Friedrich, A. D., Paz, M. L., Leoni, J., & Maglio, D. H. G. (2017) · International Journal of Molecular Sciences · doi:10.3390/ijms18061067 · Cited by 31 · see citing works

Compositional and Functional Differences in the Human Gut Microbiome Correlate with Clinical Outcome following Infection with Wild-Type Salmonella enterica Serovar Typhi

Zhang, Y., Brady, A., Jones, C. E., Song, Y., Darton, T. C., Jones, C., Blohmke, C. J., Pollard, A. J., Magder, L. S., Fasano, A., et al. (2018) · mBio · doi:10.1128/mbio.00686-18 · Cited by 31 · see citing works

Safety and Potential Role of Lactobacillus rhamnosus GG Administration as Monotherapy in Ulcerative Colitis Patients with Mild–Moderate Clinical Activity

Pagnini, C., Paolo, M. C. D., Urgesi, R., PALLOTTA, L., Fanello, G., Graziani, M. G., & Fave, G. D. (2023) · Microorganisms · doi:10.3390/microorganisms11061381 · Cited by 30 · see citing works

A metagenomic study of the preventive effect of<i>Lactobacillus rhamnosus</i>GG on intestinal polyp formation in Apc^Min/+mice

Ni, Y., Wong, V. H. Y., Tai, W. C. S., Li, J., Wong, W. Y., Lee, M. M. L., Fong, F. L. Y., El-Nezami, H., & Panagiotou, G. (2017) · Journal of Applied Microbiology · doi:10.1111/jam.13386 · Cited by 29 · see citing works

Probiotic potential of a Lactobacillus rhamnosus cheese isolate and its effect on the fecal microbiota of healthy volunteers

Bautista‐Gallego, J., Ferrocino, I., Botta, C., Ercolini, D., Cocolin, L., & Rantsiou, K. (2019) · Food Research International · doi:10.1016/j.foodres.2019.02.004 · Cited by 29 · see citing works

Biodiversity of Intestinal Lactic Acid Bacteria in the Healthy Population

Mikelsaar, M., Sepp, E., Štšepetova, J., Songisepp, E., & Mändar, R. (2016) · Advances in experimental medicine and biology · doi:10.1007/5584_2016_3 · Cited by 29 · see citing works

Lactobacillus rhamnosus GG

Gorbach, S. L., Doron, S., & Magro, F. (2017) · Elsevier eBooks · doi:10.1016/b978-0-12-804024-9.00007-0 · Cited by 28 · see citing works

The antidepressant-like effect of probiotics and their faecal abundance may be modulated by the cohabiting gut microbiota in rats

Abildgaard, A. M., Kern, T., Pedersen, O. B., Hansen, T. F., Wegener, G., & Lund, S. A. (2018) · European Neuropsychopharmacology · doi:10.1016/j.euroneuro.2018.10.011 · Cited by 29 · see citing works

Cross-Kingdom Similarities in Microbiome Ecology and Biocontrol of Pathogens

Berg, G., Krause, R. G. E., & Mendes, R. (2015) · Frontiers in Microbiology · doi:10.3389/fmicb.2015.01311 · Cited by 27 · see citing works

Defining gut mycobiota for wild animals: a need for caution in assigning authentic resident fungal taxa

Lavrinienko, A., Scholier, T., Bates, S. T., Miller, A. N., & Watts, P. C. (2021) · Animal Microbiome · doi:10.1186/s42523-021-00134-z · Cited by 27 · see citing works

Efficacy and Safety of Lactobacillus reuteri CCFM1040 in Allergic Rhinitis and Asthma: A Randomized, Placebo-Controlled Trial

Li, L., Fang, Z., Lee, Y. K., Zhao, J., Zhang, H., Peng, H., Zhang, Y., Lu, W., & Chen, W. (2022) · Frontiers in Nutrition · doi:10.3389/fnut.2022.862934 · Cited by 27 · see citing works

Long-term administration of Lactobacillus casei Zhang stabilized gut microbiota of adults and reduced gut microbiota age index of older adults

He, Q., Hou, Q., Wang, Y., Shen, L., Sun, Z., Zhang, H., Liong, M., & Kwok, L. (2019) · Journal of Functional Foods · doi:10.1016/j.jff.2019.103682 · Cited by 26 · see citing works

Metagenomic and metatranscriptomic profiling of Lactobacillus casei Zhang in the human gut

Wang, J., Zhang, J., Liu, W., Zhang, H., & Sun, Z. (2021) · npj Biofilms and Microbiomes · doi:10.1038/s41522-021-00227-2 · Cited by 25 · see citing works

A diet-induced gut microbiota component and related plasma metabolites are associated with depressive-like behaviour in rats

Abildgaard, A. M., Kern, T., Pedersen, O. B., Hansen, T. F., Lund, S. A., & Wegener, G. (2020) · European Neuropsychopharmacology · doi:10.1016/j.euroneuro.2020.09.001 · Cited by 24 · see citing works

Safety of Bifidobacterium animalis Subsp. Lactis (B. lactis) Strain BB‐12‐Supplemented Yogurt in Healthy Children

Tan, T., Ba, Z., Sanders, M. E., D'Amico, F. J., Roberts, R., Smith, K. H., & Merenstein, D. J. (2016) · Journal of Pediatric Gastroenterology and Nutrition · doi:10.1097/mpg.0000000000001272 · Cited by 24 · see citing works

Enterococcus faecium are associated with the modification of gut microbiota and shrimp post-larvae survival

Du, S., Chen, W., Yao, Z., Huang, X., Chen, C., Guo, H., & Zhang, D. (2021) · Animal Microbiome · doi:10.1186/s42523-021-00152-x · Cited by 22 · see citing works

Nutraceuticals and probiotics in the management of psychiatric and neurological disorders: A focus on microbiota-gut-brain-immune axis

Tong, J., Satyanarayanan, S. K., & Su, H. (2020) · Brain Behavior and Immunity · doi:10.1016/j.bbi.2020.08.027 · Cited by 24 · see citing works

Postbiotics: A Promising Approach to Combat Age-Related Diseases

Hamdi, A., Lloyd, C., Eri, R. D., & Van, T. T. H. (2025) · Life · doi:10.3390/life15081190 · Cited by 24 · see citing works

Regulation of host gene expression by gastrointestinal tract microbiota in Chinook Salmon ( Oncorhynchus tshawytscha )

Sadeghi, J., Chaganti, S. R., & Heath, D. D. (2023) · Molecular Ecology · doi:10.1111/mec.17039 · Cited by 20 · see citing works

Measurement of the whole blood transcriptomic signatures in healthy elderly subjects fed the probiotic bacteria Lactobacillus rhamnosus GG ATCC 53103 (LGG)

Solano-Aguilar, G. I., Molokin, A., Botelho, C. A., Fiorino, A., Chen, C. T., Urban, J. F., Dawson, H. D., Haverkamp, M. R., Wang, L., & Hibberd, P. L. (2013) · The FASEB Journal · doi:10.1096/fasebj.27.1_supplement.1079.64

Transcriptomic Profile of Whole Blood Cells from Elderly Subjects Fed Probiotic Bacteria Lactobacillus rhamnosus GG ATCC 53103 (LGG) in a Phase I Open Label Study

Solano-Aguilar, G. I., Molokin, A., Botelho, C. A., Fiorino, A., Vinyard, B. T., Li, R., Chen, C. T., Urban, J. F., Dawson, H. D., Andreyeva, I., et al. (2016) · PLoS ONE · doi:10.1371/journal.pone.0147426 · Cited by 20 · see citing works

Personalized B cell response to the Lactobacillus rhamnosus GG probiotic in healthy human subjects: a randomized trial

Bornholdt, J., Broholm, C., Chen, Y., Rago, A., Sloth, S., Hendel, J. W., Melsæther, C., Müller, C. V., Nielsen, M. J., Strickertsson, J. A. B., et al. (2020) · Gut Microbes · doi:10.1080/19490976.2020.1854639 · Cited by 16 · see citing works

Metagenomic and metatranscriptomic profiling of Lactobacillus casei Zhang in the human gut

Wang, J., Zhang, J., Liu, W., Zhang, H., & Sun, Z. (2021) · npj Biofilms and Microbiomes · doi:10.1038/s41522-021-00227-2 · Cited by 25 · see citing works

Dietary Tryptophan‐Lactobacillus rhamnosus GG Interactions Modify Intestinal Differentiation and Function

Suntornsaratoon, P., Flores, J., Upadhyay, R., Lopez, P., Patel, R., Bandyopadhyay, S., Gao, N., & Ferraris, R. P. (2022) · The FASEB Journal · doi:10.1096/fasebj.2022.36.s1.r3102