A Regulatory Role for MicroRNA 33* in Controlling Lipid Metabolism Gene Expression

Goedeke, Leigh; Vales-Lara, Frances M.; Fenstermaker, Michael; Cirera-Salinas, Daniel; Chamorro-Jorganes, Aranzazu; Ramírez, Cristina M.; Mattison, Julie A.; de Cabo, Rafael; Suárez, Yajaira; Fernández-Hernando, Carlos

doi:10.1128/mcb.01714-12

Cited by 140MicroRNA in disease regulationCholesterol and Lipid MetabolismLipid metabolism and disorders

A Regulatory Role for MicroRNA 33* in Controlling Lipid Metabolism Gene Expression

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Goedeke, Leigh, Vales-Lara, Frances M., Fenstermaker, Michael, Cirera-Salinas, Daniel, Chamorro-Jorganes, Aranzazu, Ramírez, Cristina M., Mattison, Julie A., de Cabo, Rafael +2 more·2013·Molecular and Cellular Biology

DOI 10.1128/mcb.01714-12PMC PMC3648071

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Abstract

hsa-miR-33a and hsa-miR-33b, intronic microRNAs (miRNAs) located within the sterol regulatory element-binding protein 2 and 1 genes (Srebp-2 and -1), respectively, have recently been shown to regulate lipid homeostasis in concert with their host genes. Although the functional role of miR-33a and -b has been highly investigated, the role of their passenger strands, miR-33a* and -b*, remains unclear. Here, we demonstrate that miR-33a* and -b* accumulate to steady-state levels in human, mouse, and nonhuman primate tissues and share a similar lipid metabolism target gene network as their sister strands. Analogous to miR-33, miR-33* represses key enzymes involved in cholesterol efflux (ABCA1 and NPC1), fatty acid metabolism (CROT and CPT1a), and insulin signaling (IRS2). Moreover, miR-33* also targets key transcriptional regulators of lipid metabolism, including SRC1, SRC3, NFYC, and RIP140. Importantly, inhibition of either miR-33 or miR-33* rescues target gene expression in cells overexpressing pre-miR-33. Consistent with this, overexpression of miR-33* reduces fatty acid oxidation in human hepatic cells. Altogether, these data support a regulatory role for the miRNA* species and suggest that miR-33 regulates lipid metabolism through both arms of the miR-33/miR-33* duplex.

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miR-33 represses IRS2, PRKAA1, and SIRT6, genes important for maintenance of insulin sensitivity, cellular energy balance, and mitochondrial function.
“It represses insulin receptor substrate 2 (IRS2), protein kinase AMP-activated catalytic subunit a1 (PRKAA1), and sirtuin 6 (SIRT6) 34 , 35) , genes that are important for the maintenance of insulin sensitivity, cellular energy balance, and the mitochondrial function.”
From Critical Role of microRNA-33a/b in Cardiovascular and Metabolic Disease: Molecular Mechanisms and Therapeutic Perspectives (2026) · cites this paper as [35]
miR-33 suppresses genes involved in mitochondrial β-oxidation, such as CPT1A, HADHB, and CROT.
“MiR-33 suppresses genes involved in mitochondrial β-oxidation, such as carnitine palmitoyltransferase 1A (CPT1A), hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit b (HADHB), and carnitine O-octanoyltransferase (CROT) 15 , 17 , 34 , 35) .”
From Critical Role of microRNA-33a/b in Cardiovascular and Metabolic Disease: Molecular Mechanisms and Therapeutic Perspectives (2026) · cites this paper as [35]

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Authors: Goedeke, L., Vales-Lara, F. M., Fenstermaker, M., Cirera-Salinas, D., Chamorro-Jorganes, A., Ramírez, C. M., Mattison, J. A., de Cabo, R., Suárez, Y., & Fernández-Hernando, C.
Affiliations: New York University (US)
Department of Medicine, Leon H. Charney Division of Cardiology, Department of Cell Biology, and the Marc and Ruti Bell Vascular Biology and Disease Program, New York University School of Medicine, New York, New York, USA
National Institutes of Health (US)
Translational Gerontology Branch, National Institute on Aging, National Institutes of Health, Baltimore, Maryland, USA
ORCID: Goedeke, Leigh
Ramírez, Cristina M.
Mattison, Julie A.
Suárez, Yajaira
Venue: Molecular and Cellular Biology
Publisher: Informa UK Limited
Published: 2013-06-01
Volume: 33
Issue: 11
Pages: 2339-2352
ISSN: 0270-7306 (ISSN-L)
1098-5549
DOI: 10.1128/mcb.01714-12
PMC: PMC3648071
OpenAlex: W2108732038
Cited by: 140
References: 43
Citations by year: 2026: 2 · 2025: 8 · 2024: 3 · 2023: 9 · 2022: 6 · 2021: 14 · 2020: 7 · 2019: 9 · 2018: 14 · 2017: 10 · 2016: 17 · 2015: 20 · 2014: 19 · 2013: 2
FWCI: 6.80
Type: journal article
Language: en
Open access: green
europepmc.org
Licence: journals.asm.org/non-commercial-tdm-license (tdm)
Locations: Molecular and Cellular Biology (publishedVersion)
Europe PMC (PubMed Central) (publishedVersion)
PubMed Central (publishedVersion)
PubMed (publishedVersion)
Funders: National Institutes of Health
National Institute on Aging (F31AG043318)
National Heart, Lung, and Blood Institute (R01HL105945, R01HL106063, R01HL107953)
Topics: Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › MicroRNA in disease regulation
Health Sciences › Medicine › Surgery › Cholesterol and Lipid Metabolism
Health Sciences › Medicine › Cardiology and Cardiovascular Medicine › Lipid metabolism and disorders
Keywords: miR-33a, miR-33b, miR-33, intronic microRNA, lipid metabolism, SREBP2, SREBP1, cholesterol efflux, fatty acid oxidation, insulin signaling, insulin receptor substrate 2, ABCA1, NPC1, CPT1A, SRC-1, SRC-3, RIP140, hepatocytes
MeSH terms: Animals, Base Sequence, Cell Line, Fatty Acids, Gene Expression Regulation, Humans, Liver, Macaca mulatta, Macrophages, Male, Mice, Inbred C57BL, Conserved Sequence, 3' Untranslated Regions, MicroRNAs, Lipid Metabolism, Mice

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A Regulatory Role for MicroRNA 33* in Controlling Lipid Metabolism Gene Expression

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