miR-33a/b contribute to the regulation of fatty acid metabolism and insulin signaling
Open accessAbstract
Cellular imbalances of cholesterol and fatty acid metabolism result in pathological processes, including atherosclerosis and metabolic syndrome. Recent work from our group and others has shown that the intronic microRNAs hsa-miR-33a and hsa-miR-33b are located within the sterol regulatory element-binding protein-2 and -1 genes, respectively, and regulate cholesterol homeostasis in concert with their host genes. Here, we show that miR-33a and -b also regulate genes involved in fatty acid metabolism and insulin signaling. miR-33a and -b target key enzymes involved in the regulation of fatty acid oxidation, including carnitine O -octaniltransferase, carnitine palmitoyltransferase 1A, hydroxyacyl-CoA-dehydrogenase, Sirtuin 6 (SIRT6), and AMP kinase subunit-α. Moreover, miR-33a and -b also target the insulin receptor substrate 2, an essential component of the insulin-signaling pathway in the liver. Overexpression of miR-33a and -b reduces both fatty acid oxidation and insulin signaling in hepatic cell lines, whereas inhibition of endogenous miR-33a and -b increases these two metabolic pathways. Together, these data establish that miR-33a and -b regulate pathways controlling three of the risk factors of metabolic syndrome, namely levels of HDL, triglycerides, and insulin signaling, and suggest that inhibitors of miR-33a and -b may be useful in the treatment of this growing health concern.
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Written from the paper’s full text.
TL;DR
miR-33a and miR-33b, intronic miRNAs of SREBP-2 and SREBP-1, directly target genes involved in fatty acid oxidation and insulin signaling, including CROT, CPT1a, HADHB, AMPKα, SIRT6, and IRS2. Overexpression reduces fatty acid oxidation and insulin signaling in hepatic cells, whereas inhibition increases them, suggesting miR-33 antagonism as a possible therapeutic strategy for metabolic syndrome.
Key findings
- miR-33b repressed luciferase reporters containing the 3′ UTRs of Crot, Cpt1a, Hadhb, Ampkα, Irs2, and Sirt6; mutation of miR-33 target sites relieved repression. In Huh7 cells, miR-33b transfection (32-fold increase) inhibited CROT, CPT1a, HADHB, AMPKα, and IRS2 mRNA, while anti-miR-33b (threefold decrease) increased CROT, CPT1a, AMPKα, and IRS2 mRNA.
- miR-33b overexpression (27-fold increase) reduced [14C]-oleate oxidation in Huh7 cells; anti-miR-33 (2.6-fold increase) increased fatty acid β-oxidation. miR-33b–transfected cells accumulated more triglycerides in larger lipid droplets without changes in basal or insulin-induced triglyceride synthesis. Drosophila fat body miR-33 overexpression caused large lipid droplets and increased TAG upon starvation.
- miR-33b reduced insulin-stimulated AKT and ERK phosphorylation, in vitro AKT kinase activation, and 2-deoxyglucose uptake; IRS2 cDNA lacking the 3′ UTR rescued AKT activation and FoxO1 cytoplasmic translocation. miR-33a and -b differ by 2 nt of 19 nt of the mature RNA but showed similar targeting effects.
- In mice, lentiviral miR-33 reduced hepatic CROT, HADHB, CPT1a, IRS2, and ABCA1 mRNA; anti-miR-33 produced modest increases in CROT, CPT1a, IRS2, and ABCA1 that were not statistically significant.
Methods
- Cell-based assays in Huh7 and HepG2 hepatic cells: luciferase reporter constructs containing wild-type or mutated 3′ UTRs of predicted targets; transfection with miR-33a, miR-33b, anti-miR-33, or controls; mRNA/protein expression and 84-gene arrays for fatty acid and insulin-related genes.
- Metabolic and signaling assays: fatty acid β-oxidation measured by release of [14C]-CO2 from [14C]-oleate; Bodipy staining and triglyceride measurement; insulin-stimulated AKT/ERK phosphorylation, AKT kinase assay, 2-deoxyglucose uptake, and FoxO1-GFP localization.
- In vivo models: mouse lentiviral delivery of premiR-33, anti-miR-33, or control; Drosophila transgenic fat body overexpression of miR-33 with starvation, Bodipy staining, and TAG measurement. Detailed procedures are in SI Materials and Methods.
Limitations
- The paper states that additional experiments, including RIPseq and proteomics, are warranted to understand the miR-33 regulatory network and its implications in lipid and carbohydrate metabolism.
- The paper states that the functional relevance of the miR-33b/SREBP-1 association cannot easily be determined using traditional models of insulin resistance such as rats or mice, because their Srebp1 genes lack miR-33b; it also states that additional research and specialty clinical trials are needed to translate these therapies into clinical practice.
- Evident from the text: much of the mechanistic evidence comes from hepatic cell lines and Drosophila, and the in vivo mouse anti-miR-33 effects on CROT, CPT1a, IRS2, and ABCA1 were modest and not statistically significant.
Model-written summary. Check it against the paper before relying on it.
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Cites
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Claims the paper makes
31 of 69 cited sources checked · 17 supported · 0 flagged · accuracy not yet measured
- Findingown data§ Results
Bioinformatic analysis identified SIRT6 as a third miR-33 predicted target involved in glucose homeostasis.
“In addition to IRS2 and FRS2, our bioinformatic analysis identified a third miR-33 predicted target involved in glucose homeostasis: the histone deacetylase SIRT6 (25, 26).”
Quote in the paperNot a substantial claim2 of 2 sources checked- cites [25] Xiao C, et al. SIRT6 deficiency results in severe hypoglycemia by enhancing both basal and insulin-stimulated glucose uptake in mice. J Biol Chem. 2010;285:36776–36784. doi: 10.1074/jbc.M110.168039. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [26] Zhong L, et al. The histone deacetylase Sirt6 regulates glucose homeostasis via Hif1alpha. Cell. 2010;140:280–293. doi: 10.1016/j.cell.2009.12.041. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- Premisecitation§ Discussion
Inhibition of miR-33a and -b effectively increases HDL in mice.
“Although our previous work in mice supports this contention by showing that inhibition of miR-33a and -b effectively increases HDL (14)”
Quote in the paperSubstantial claim1 of 1 sources checked- cites [14] Rayner KJ, et al. MiR-33 contributes to the regulation of cholesterol homeostasis. Science. 2010;328:1570–1573. doi: 10.1126/science.1189862. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The passage on the mouse experiment (indexed under Abstract; page unavailable) reports that anti-miR-33 increased plasma HDL by 25% after six days. The paper identifies the studied mouse miR-33 as the homolog of human miR-33a; our copy does not show that inhibition of miR-33b was tested in mice. (LLM, conf=0.89)
Experimental — accuracy not yet measured
- Premisecitation§ Discussion
These pathways regulate circulating HDL levels through their roles in HDL biogenesis and cellular cholesterol efflux.
“Importantly, these pathways regulate circulating HDL levels through their roles in HDL biogenesis and cellular cholesterol efflux (12–14).”
Quote in the paperNot a substantial claim2 of 3 sources checked- cites [12] Marquart TJ, Allen RM, Ory DS, Baldán A. miR-33 links SREBP-2 induction to repression of sterol transporters. Proc Natl Acad Sci USA. 2010;107:12228–12232. doi: 10.1073/pnas.1005191107. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [13] Najafi-Shoushtari SH, et al. MicroRNA-33 and the SREBP host genes cooperate to control cholesterol homeostasis. Science. 2010;328:1566–1569. doi: 10.1126/science.1189123. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [14] Rayner KJ, et al. MiR-33 contributes to the regulation of cholesterol homeostasis. Science. 2010;328:1570–1573. doi: 10.1126/science.1189862. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- Findingown data§ Abstract
miR-33a and -b target key enzymes involved in the regulation of fatty acid oxidation, including CROT, CPT1A, HADHB, SIRT6, and AMPKα.
“miR-33a and -b target key enzymes involved in the regulation of fatty acid oxidation, including carnitine O-octaniltransferase, carnitine palmitoyltransferase 1A, hydroxyacyl-CoA-dehydrogenase, Sirtuin 6 (SIRT6), and AMP kinase subunit-α.”
Quote in the paperSubstantial claim - Findingcitation§ Results
Several genes involved in fatty acid β-oxidation have predicted targets for miR-33, including CROT, CPT1a, HADHB, and AMPKα.
“As shown in Fig. S2 (red box), several genes involved in fatty acid β-oxidation have predicted targets for miR-33, including CROT, CPT1a, HADHB and AMPKα (17–20).”
Quote in the paperSubstantial claim0 of 4 sources checked- cites [17] Brady PS, Ramsay RR, Brady LJ. Regulation of the long-chain carnitine acyltransferases. FASEB J. 1993;7:1039–1044. doi: 10.1096/fasebj.7.11.8370473. [DOI] [PubMed] [Google Scholar]
Not checked in the free run.
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Not checked in the free run.
- Findingown data§ Abstract
miR-33a and -b regulate genes involved in fatty acid metabolism and insulin signaling.
“Here, we show that miR-33a and -b also regulate genes involved in fatty acid metabolism and insulin signaling.”
- Also stated in: § Abstract · plain
“In addition to this role in maintaining cholesterol homeostasis, we now show that miR-33a and -b also regulate fatty acid metabolism and insulin signaling.”
Quote in the paperSubstantial claim- Rests on an assumption: IRS2 is an essential component of the insulin-signaling pathway in the liver.
- Also stated in: § Abstract · plain
- Findingown data§ Results
Kinetic analysis revealed a concomitant increase in miR-33b and SREBP-1c expression, consistent with their coregulation.
“Kinetic analysis of miR-33b induction revealed a concomitant increase in miR-33b and SREBP-1c expression, consistent with their coregulation.”
Quote in the paperSubstantial claim - Findingown data§ Results
miR-33b is synchronously expressed with SREBP-1c in human hepatic Huh7 cells treated with an LXR agonist.
“As shown in Fig. S1 A and B, miR-33b is synchronously expressed with SREBP-1c in human hepatic Huh7 cells treated with an agonist of the liver X receptor (LXR), a transcriptional regulator of Srebp-1c expression.”
Quote in the paperSubstantial claim - Findingown data§ Abstract
miR-33a and -b target IRS2.
“Moreover, miR-33a and -b also target the insulin receptor substrate 2, an essential component of the insulin-signaling pathway in the liver.”
Quote in the paperSubstantial claim - Findingown data§ Discussion
miR-33a and miR-33b have overlapping gene targets.
“Notably, we show that miR-33a and miR-33b have overlapping gene targets”
Quote in the paperSubstantial claim - Findingown data§ Results
miR-33b overexpression reduces insulin-induced 2-deoxyglucose uptake in Huh7 cells.
“As seen in Fig. 3F, miR-33b overexpression reduced insulin-induced 2-deoxyglucose (2-DOG) uptake in Huh7 cells.”
Quote in the paperSubstantial claim - Findingown data§ Discussion
miR-33b targets genes involved in fatty acid oxidation and insulin signaling.
“We now show that a second member of the miR-33 family, miR-33b, is coregulated with the human Srebp1 gene and targets genes involved in fatty acid oxidation and insulin signaling.”
Quote in the paperSubstantial claim - Findingown data§ Results
Mice expressing anti-miR-33 showed a modest increase of CROT, CPT1a, IRS2, and ABCA1 mRNA expression, although the effect was not statistically significant.
“Conversely, mice expressing anti–miR-33 showed a modest increase of CROT, CPT1a, IRS2, and ABCA1 mRNA expression, although the effect was not statistically significant (Fig. S4).”
Quote in the paperNot a substantial claim - Findingown data§ Results
miR-33b overexpression down-regulates IRS2 in Huh7 cells.
“As expected, IRS2 was down-regulated in Huh7 cells transfected with miR-33b (Fig. 3D).”
Quote in the paperSubstantial claim - Findingreasoning§ Results
Huh7 cells transfected with miR-33b accumulated more triglycerides in larger lipid droplets.
“In agreement with the reduced fatty acid β-oxidation rates observed in hepatic cells overexpressing miR-33b, Huh7 cells transfected with miR-33b accumulated more triglycerides (TAG) in larger lipid droplets (Fig. 2 C and D).”
Quote in the paperSubstantial claim - Findingown data§ Results
miR-33 expression did not alter basal and insulin-induced triglyceride synthesis.
“As seen in Fig. 2E, miR-33 expression did not alter basal and insulin-induced triglyceride synthesis.”
Quote in the paperSubstantial claim - Findingown data§ Results
Flies overexpressing miR-33 accumulated more TAG upon starvation.
“Similarly, flies overexpressing miR-33 accumulated more TAG upon starvation (Fig. 2H), indicating that the function of miR-33 in regulating fatty acid oxidation is conserved from Drosophila to humans.”
Quote in the paperSubstantial claim - Findingown data§ Discussion
miR-33b is coregulated with the human Srebp1 gene.
“We now show that a second member of the miR-33 family, miR-33b, is coregulated with the human Srebp1 gene and targets genes involved in fatty acid oxidation and insulin signaling.”
Quote in the paperSubstantial claim - Findingown data§ Results
In mice, miR-33 reduced hepatic CROT, HADHB, CPT1a, IRS2, and ABCA1 mRNA expression.
“Consistent with our in vitro results, miR-33 reduced hepatic CROT, HADHB, CPT1a, IRS2, and ABCA1 mRNA expression (Fig. S4).”
Quote in the paperSubstantial claim - Findingown data§ Results
miR-33b represses the 3′ UTR activity of Sirt6 in a luciferase reporter assay.
“miR-33b markedly repressed the 3′ UTR activity of Sirt6 (Fig. S8A)”
Quote in the paperNot a substantial claim - Findingown data§ Results
Mutation of the miR-33 target sites in the Sirt6 3′ UTR relieves miR-33b repression of Sirt6.
“mutation of the miR-33 target sites in the 3′ UTR relieved miR-33b repression of Sirt6”
Quote in the paperNot a substantial claim - Findingown data§ Results
miR-33b overexpression significantly inhibits SIRT6 mRNA and protein levels in Huh7 cells.
“Furthermore, miR-33b overexpression significantly inhibited the SIRT6 mRNA and protein levels in Huh7 cells (Fig. S8 B and C)”
Quote in the paperSubstantial claim - Findingown data§ Results
IRS2 overexpression rescues the effect of miR-33 overexpression on FoxO1 intracellular localization in Huh7 cells.
“Interestingly, IRS2 overexpression rescued the effect of miR-33 overexpression on FoxO1 intracellular localization (Fig. S7 C and D).”
Quote in the paperSubstantial claim - Findingown data§ Results
miR-33b overexpression markedly reduced fatty acid β-oxidation in Huh7 cells.
“miR-33b overexpression (27-fold increase) markedly reduced the fatty acid β-oxidation in Huh7 (Fig. 2A) cells.”
Quote in the paperSubstantial claim - Findingown data§ Results
Both miR-33a and -b significantly inhibited the 3′ UTR activity of Crot, Cpt1a, Hadhb, Ampkα, and Irs2 with only modest differences.
“In addition, both miR-33a and -b significantly inhibited the 3′ UTR activity of Crot, Cpt1a, Hadhb, Ampkα, and Irs2 with only modest differences, indicating that the 2-nt variation in the mature forms of miR-33a and -b does not appreciably affect the gene targeting by these miRNAs.”
Quote in the paperSubstantial claim - Findingown data§ Results
miR-33a and -b inhibited CROT, CPT1a, HADHB, AMPKα, SIRT6, and IRS2 protein expression to a similar extent.
“As seen in Fig. S6, miR-33a and -b inhibited CROT, CPT1a, HADHB, AMPKα, SIRT6, and IRS2 protein expression to a similar extent.”
Quote in the paperSubstantial claim - Findingown data§ Results
IRS2 overexpression rescues insulin-stimulated AKT activation in miR-33b-overexpressing Huh7 cells.
“As seen in Fig. 3 D and E, IRS2 expression rescued the AKT activation on insulin stimulation in miR-33b–overexpressing cells.”
Quote in the paperSubstantial claim - Findingown data§ Results
Mutation of both miR-33 sites in the 3′ UTR of Crot was necessary to completely reverse the inhibitory effects of miR-33.
“Mutation of both miR-33 sites in the 3′ UTR of Crot was necessary to completely reverse the inhibitory effects of miR-33 (Fig. S3).”
Quote in the paperSubstantial claim - Findingown data§ Results
miR-33b overexpression reduces insulin-stimulated AKT phosphorylation in Huh7 cells.
“As seen in Fig. 3 A and B, Huh7 cells transfected with miR-33b showed reduced AKT and ERK phosphorylation after insulin stimulation”
- Also stated in: § Results · plain
“Similar results were observed when we analyzed the AKT activation using an in vitro kinase assay (Fig. 3C).”
Quote in the paperSubstantial claim - Also stated in: § Results · plain
- Findingown data§ Results
Transfection of Huh7 cells with miR-33b significantly inhibited the mRNA levels of CROT, CPT1a, HADHB, AMPKα, and IRS2.
“Transfection of Huh7 cells with miR-33b (32-fold increase expression) significantly inhibited the mRNA levels of CROT, CPT1a, HADHB, AMPKα, and IRS2 (Fig. 1A).”
Quote in the paperSubstantial claim - Findingown data§ Results
Inhibition of endogenous miR-33b increased the mRNA expression of CROT, CPT1a, AMPKα, and IRS2 in Huh7 cells.
“Notably, inhibition of endogenous miR-33b using anti–miR-33b oligonucleotides (threefold decrease expression) increased the mRNA expression of CROT, CPT1a, AMPKα, and IRS2 in Huh7 cells (Fig. 1B), consistent with a physiological role for miR-33b in regulating the expression of these genes.”
Quote in the paperSubstantial claim - Findingown data§ Results
miR-33b represses the activity of Crot, Cpt1a, Hadhb, Ampkα, and Irs2 3′ UTR luciferase constructs.
“miR-33b markedly repressed the activity of the Crot, Cpt1a, Hadhb, Ampkα, and Irs2 3′ UTR luciferase constructs (Fig. S3).”
Quote in the paperSubstantial claim - Findingown data§ Results
Fat bodies from starved miR-33 transgenic flies showed large lipid droplets compared with control flies.
“Accordingly, fat bodies from starved miR-33 transgenic flies, dissected and stained with Bodipy, showed large lipid droplets in many cells compared with control flies (Fig. 2G).”
Quote in the paperSubstantial claim - Findingown data§ Results
Inhibition of SIRT6 expression by siRNA only modestly decreases fatty acid β-oxidation.
“because inhibition of SIRT6 expression by siRNA only modestly decreased fatty acid β-oxidation (Fig. S8D).”
Quote in the paperSubstantial claim - Findingown data§ Results
miR-33b overexpression reduces insulin-stimulated ERK phosphorylation in Huh7 cells.
“As seen in Fig. 3 A and B, Huh7 cells transfected with miR-33b showed reduced AKT and ERK phosphorylation after insulin stimulation”
Quote in the paperSubstantial claim - Findingown data§ Results
Inhibition of endogenous miR-33b increased the rate of fatty acid β-oxidation.
“Conversely, inhibition of endogenous miR-33b expression using anti–miR-33 (2.6-fold increase) increased the rate of fatty acid β-oxidation (Fig. 2B).”
Quote in the paperSubstantial claim - Findingown data§ Results
Inhibition of endogenous miR-33b by anti-miR-33 increases SIRT6 expression in Huh7 cells.
“whereas inhibition of endogenous miR-33b by anti–miR-33 increased the expression of SIRT6 (Fig. S8 B and C).”
Quote in the paperSubstantial claim - Findingown data§ Results
The increase in triglyceride content was independent of changes in triglyceride synthesis rates.
“The increase in triglyceride content was independent of changes in triglyceride synthesis rates.”
Quote in the paperSubstantial claim - Findingown data§ Discussion
miR-33 transgenic flies show increased lipid accumulation in tissues.
“Finally, we show that miR-33 transgenic flies show increased lipid accumulation in tissues”
Quote in the paperSubstantial claim - Findingown data§ Discussion
miR-33 overexpression reduces fatty acid oxidation in hepatic cell lines.
“Importantly, we show that miR-33 overexpression reduces fatty acid oxidation in hepatic cell lines.”
Quote in the paperSubstantial claim - Findingown data§ Discussion
Bioinformatic analysis of miR-33a and -b target genes revealed an enrichment of genes involved in fatty acid metabolism.
“our bioinformatic analysis of miR-33a and -b target genes revealed an enrichment of genes involved in fatty acid metabolism.”
Quote in the paperSubstantial claim - Findingown data§ Discussion
Six miR-33 target genes that regulate fatty acid metabolism and insulin signaling were identified: CPT1a, CROT, HADHB, AMPKα, SIRT6, and IRS2.
“We identify herein six miR-33 target genes that regulate fatty acid metabolism and insulin signaling, including CPT1a, CROT, HADHB, AMPKα, SIRT6, and IRS2.”
Quote in the paperSubstantial claim - Interpretationown data§ Abstract
miR-33a and -b regulate pathways controlling three risk factors of metabolic syndrome: HDL, triglycerides, and insulin signaling.
“Together, these data establish that miR-33a and -b regulate pathways controlling three of the risk factors of metabolic syndrome, namely levels of HDL, triglycerides, and insulin signaling”
- Also stated in: § Abstract · hedged
“Together, these data suggest that feedback loops involving SREBPs and miR-33a and -b balance cholesterol metabolism, fatty acid oxidation, and insulin signaling, three of the major risk factors of metabolic syndrome (1, 3, 15).”
Quote in the paperSubstantial claim0 of 3 sources checked- cites [1] Alberti KG, Zimmet P, Shaw J. Metabolic syndrome—a new world-wide definition. A Consensus Statement from the International Diabetes Federation. Diabet Med. 2006;23:469–480. doi: 10.1111/j.1464-5491.2006.01858.x. [DOI] [PubMed] [Google Scholar] source
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Not checked in the free run.
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- Rests on an assumption: IRS2 is an essential component of the insulin-signaling pathway in the liver.
- Also stated in: § Abstract · hedged
- Interpretationreasoning§ Discussion
miR-33a and miR-33b act in concert with their host genes, Srebp-2 and Srebp-1, to boost intracellular cholesterol and fatty acid levels by balancing transcriptional induction and posttranscriptional repression of lipid metabolism genes.
“Together, these results suggest a paradigm in which miR-33a and miR-33b act in concert with their host genes, Srebp-2 and Srebp-1, to boost intracellular cholesterol and fatty acid levels by balancing transcriptional induction and posttranscriptional repression of lipid metabolism genes.”
Quote in the paperSubstantial claim - Interpretationown data§ Results
miR-33 is an important regulator of insulin-signaling pathways.
“Together, these experiments identify miR-33 as an important regulator of the insulin-signaling pathways.”
Quote in the paperSubstantial claim - Interpretationown data§ Results
The relief of miR-33b repression by mutation of miR-33 target sites in the Sirt6 3′ UTR is consistent with direct interaction of miR-33b with these sites.
“consistent with a direct interaction of miR-33b with these sites (Fig. S8A)”
Quote in the paperNot a substantial claim - Interpretationown data§ Results
The function of miR-33 in regulating fatty acid oxidation is conserved from Drosophila to humans.
“indicating that the function of miR-33 in regulating fatty acid oxidation is conserved from Drosophila to humans.”
Quote in the paperSubstantial claim - Interpretationown data§ Results
SIRT6 regulation is unlikely to contribute to the regulation of fatty acid metabolism by miR-33b.
“this is unlikely to contribute to the regulation of fatty acid metabolism by miR-33b”
Quote in the paperSubstantial claim - Interpretationown data§ Results
Reduced AKT and ERK phosphorylation after insulin stimulation in miR-33b-overexpressing Huh7 cells indicates reduced IRS2 function.
“As seen in Fig. 3 A and B, Huh7 cells transfected with miR-33b showed reduced AKT and ERK phosphorylation after insulin stimulation, indicative of reduced IRS2 function.”
Quote in the paperSubstantial claim - Interpretationown data§ Results
The 2-nt variation in the mature forms of miR-33a and -b does not appreciably affect gene targeting by these miRNAs.
“indicating that the 2-nt variation in the mature forms of miR-33a and -b does not appreciably affect the gene targeting by these miRNAs.”
Quote in the paperSubstantial claim - Interpretationown data§ Discussion
miR-33a and -b impact pathways influencing three primary risk factors in metabolic syndrome: insulin resistance, low HDL, and high triglycerides/VLDL.
“Our data indicate that miR-33a and -b impact pathways influencing three of the primary risk factors in this disease, namely insulin resistance, low HDL, and high triglycerides/VLDL.”
Quote in the paperSubstantial claim - Interpretationown data§ Discussion
miR-33 regulation of fatty acid metabolism pathways is evolutionarily conserved.
“suggesting that miR-33 regulation of fatty acid metabolism pathways is evolutionarily conserved.”
Quote in the paperSubstantial claim - Interpretationown data§ Discussion
By inhibiting expression of IRS2 in hepatic cells, miR-33a and -b reduce activation of downstream insulin signaling pathways, including AKT and ERK.
“By inhibiting expression of IRS2 in hepatic cells, miR-33a and -b reduce the activation of downstream insulin signaling pathways, including AKT and ERK.”
Quote in the paperSubstantial claim - Interpretationown data§ Discussion
Antagonism of endogenous miR-33 may be useful as a therapeutic strategy for treating metabolic syndrome and nonalcoholic fatty liver disease (NAFLD).
“Our results suggest that antagonism of endogenous miR-33 may be useful as a therapeutic strategy for treating metabolic syndrome and nonalcoholic fatty liver disease (NAFLD)”
Quote in the paperSubstantial claim - Interpretationreasoning§ Discussion
The model of reciprocal regulation of cholesterol and fatty acid metabolism by SREBPs is established.
“this establishes a model of reciprocal regulation of cholesterol and fatty acid metabolism by SREBPs (Fig. 4).”
Quote in the paperSubstantial claim - Interpretationreasoning§ Discussion
Cotranscription of Srebp-2 and miR-33a or Srebp-1 and miR-33b would be predicted to regulate both cholesterol metabolism and fatty acid oxidation.
“suggesting that cotranscription of Srebp-2 and miR-33a or Srebp-1 and miR-33b would be predicted to regulate both cholesterol metabolism and fatty acid oxidation”
Quote in the paperSubstantial claim - Interpretationown data§ Discussion
miR-33a and -b are regulators of insulin signaling.
“Our work also identifies miR-33a and -b as regulators of insulin signaling.”
Quote in the paperSubstantial claim
- Classified as probably not a substantial claim. 23
- May combine two claims. 20
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisecitation§ AbstractmiRNAs are critical regulators of gene expression acting predominantly at the posttranscriptional level.
“a class of noncoding RNAs, termed microRNAs (miRNAs), has emerged as critical regulators of gene expression acting predominantly at the posttranscriptional level (8–10).”
Quote in the paperNot a substantial claim1 of 3 sources checked- cites [8] Ambros V. The functions of animal microRNAs. Nature. 2004;431:350–355. doi: 10.1038/nature02871. [DOI] [PubMed] [Google Scholar] source
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Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Premisecitation§ AbstractIn mice, there is only one miR-33 gene, conserved with human miR-33a and located within intron 15 of the mouse Srebp-2 gene.
“In mice, however, there is only one miR-33 gene, which is conserved with human miR-33a and located within intron 15 of the mouse Srebp-2 gene.”
Quote in the paperNot a substantial claim3 of 4 sources checked- cites [11] Gerin I, et al. Expression of miR-33 from an SREBP2 intron inhibits cholesterol export and fatty acid oxidation. J Biol Chem. 2010;285:33652–33661. doi: 10.1074/jbc.M110.152090. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The section “miR-33a Is Produced from an Intron of the SREBP2 Gene” says that mice possess miR-33a in SREBP2 but lack miR-33b, and describes miR-33a as highly conserved. It does not specify that the mouse sequence is in intron 15, so that part of the claim is unsupported by our copy. (LLM, conf=0.88)
Experimental — accuracy not yet measured - cites [12] Marquart TJ, Allen RM, Ory DS, Baldán A. miR-33 links SREBP-2 induction to repression of sterol transporters. Proc Natl Acad Sci USA. 2010;107:12228–12232. doi: 10.1073/pnas.1005191107. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [13] Najafi-Shoushtari SH, et al. MicroRNA-33 and the SREBP host genes cooperate to control cholesterol homeostasis. Science. 2010;328:1566–1569. doi: 10.1126/science.1189123. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [14] Rayner KJ, et al. MiR-33 contributes to the regulation of cholesterol homeostasis. Science. 2010;328:1570–1573. doi: 10.1126/science.1189862. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The sequence-alignment passage (indexed under Abstract; page unavailable) identifies mouse mmu-miR-33 as the homolog of human miR-33a and places it in SREBF2. It specifies intron 16, not intron 15, and does not establish that mice have only one miR-33 gene. (LLM, conf=0.90)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisecitation§ AbstractSREBP-1c regulates the transcription of genes involved in fatty acid metabolism, such as FASN.
“SREBP-1c regulates the transcription of genes involved in fatty acid metabolism, such as fatty acid synthase (FASN) (5–7).”
Quote in the paperNot a substantial claim2 of 3 sources checked- cites [5] Brown MS, Goldstein JL. The SREBP pathway: Regulation of cholesterol metabolism by proteolysis of a membrane-bound transcription factor. Cell. 1997;89:331–340. doi: 10.1016/s0092-8674(00)80213-5. [DOI] [PubMed] [Google Scholar] source
- cites [6] Horton JD, Goldstein JL, Brown MS. SREBPs: Activators of the complete program of cholesterol and fatty acid synthesis in the liver. J Clin Invest. 2002;109:1125–1131. doi: 10.1172/JCI15593. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [7] Osborne TF. Sterol regulatory element-binding proteins (SREBPs): Key regulators of nutritional homeostasis and insulin action. J Biol Chem. 2000;275:32379–32382. doi: 10.1074/jbc.R000017200. [DOI] [PubMed] [Google Scholar] source
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisecitation§ AbstractSREBP-2 regulates the transcription of cholesterol-related genes, such as HMGCR and LDLr.
“SREBP-2 regulates the transcription of cholesterol-related genes, such as 3-hydroxy-3-methylglutaryl CoA reductase (HMGCR), which catalyzes a rate-limiting step in cholesterol biosynthesis, and the low-density lipoprotein receptor (LDLr), which imports cholesterol from the blood (5–7).”
Quote in the paperNot a substantial claim2 of 3 sources checked- cites [5] Brown MS, Goldstein JL. The SREBP pathway: Regulation of cholesterol metabolism by proteolysis of a membrane-bound transcription factor. Cell. 1997;89:331–340. doi: 10.1016/s0092-8674(00)80213-5. [DOI] [PubMed] [Google Scholar] source
- cites [6] Horton JD, Goldstein JL, Brown MS. SREBPs: Activators of the complete program of cholesterol and fatty acid synthesis in the liver. J Clin Invest. 2002;109:1125–1131. doi: 10.1172/JCI15593. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [7] Osborne TF. Sterol regulatory element-binding proteins (SREBPs): Key regulators of nutritional homeostasis and insulin action. J Biol Chem. 2000;275:32379–32382. doi: 10.1074/jbc.R000017200. [DOI] [PubMed] [Google Scholar] source
The section “Selective Roles for Individual SREBP Isoforms in Either Cholesterol or Fatty Acid Metabolism” says SREBP-2 may preferentially activate genes involved in cholesterol homeostasis, supporting the general point. The passages do not identify HMGCR or LDLr as SREBP-2 transcriptional targets; the specific LDL-receptor expression example instead concerns SREBP-1a. Page numbers are unavailable in our copy. (LLM, conf=0.84)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisecitation§ AbstractmiR-33 is a highly conserved miRNA family within the intronic sequences of the Srebp genes in organisms ranging from Drosophila to humans.
“We and others provided identification of a highly conserved miRNA family, miR-33, within the intronic sequences of the Srebp genes in organisms ranging from Drosophila to humans (11–14).”
Quote in the paperNot a substantial claim3 of 4 sources checked- cites [11] Gerin I, et al. Expression of miR-33 from an SREBP2 intron inhibits cholesterol export and fatty acid oxidation. J Biol Chem. 2010;285:33652–33661. doi: 10.1074/jbc.M110.152090. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [12] Marquart TJ, Allen RM, Ory DS, Baldán A. miR-33 links SREBP-2 induction to repression of sterol transporters. Proc Natl Acad Sci USA. 2010;107:12228–12232. doi: 10.1073/pnas.1005191107. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [13] Najafi-Shoushtari SH, et al. MicroRNA-33 and the SREBP host genes cooperate to control cholesterol homeostasis. Science. 2010;328:1566–1569. doi: 10.1126/science.1189123. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [14] Rayner KJ, et al. MiR-33 contributes to the regulation of cholesterol homeostasis. Science. 2010;328:1570–1573. doi: 10.1126/science.1189862. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The passage on sequence alignment (section labeled Abstract; page unavailable) identifies human and mouse miR-33 within an intron of SREBF2 and says its precursor is highly conserved in mammals. Our copy does not establish a miR-33 family within Srebp genes across organisms ranging from Drosophila to humans. (LLM, conf=0.87)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisecitation§ AbstractmiRNA targeting of mRNAs inhibits their expression through mRNA destabilization, repression of translation, or a combination of both processes.
“miRNA targeting of mRNAs inhibits their expression through mRNA destabilization, repression of translation, or a combination of both processes (8–10).”
Quote in the paperNot a substantial claim1 of 3 sources checked- cites [8] Ambros V. The functions of animal microRNAs. Nature. 2004;431:350–355. doi: 10.1038/nature02871. [DOI] [PubMed] [Google Scholar] source
- cites [9] Bartel DP. MicroRNAs: Target recognition and regulatory functions. Cell. 2009;136:215–233. doi: 10.1016/j.cell.2009.01.002. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [10] Filipowicz W, Bhattacharyya SN, Sonenberg N. Mechanisms of post-transcriptional regulation by microRNAs: Are the answers in sight? Nat Rev Genet. 2008;9:102–114. doi: 10.1038/nrg2290. [DOI] [PubMed] [Google Scholar] source
May combine two claims.
Premisecitation§ AbstractmiR-33a is cotranscribed with its host gene Srebp-2 and targets genes involved in cholesterol export, including ABCA1, ABCG1, and NPC1.
“We recently showed that miR-33a is cotranscribed with its host gene Srebp-2 like many intronic miRNAs, and it targets genes involved in cholesterol export, including the adenosine triphosphate binding cassette (ABC) transporters ABCA1 and ABCG1 and the endolysosomal transport protein Niemann-Pick C1 (NPC1) (14).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [14] Rayner KJ, et al. MiR-33 contributes to the regulation of cholesterol homeostasis. Science. 2010;328:1570–1573. doi: 10.1126/science.1189862. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The copy identifies hsa-miR-33a within an intron of SREBF2 and describes coincident transcription of SREBF2 and miR-33 (passages 8 and 7, labeled Abstract). It supports ABCA1 and NPC1 as targets, but explicitly limits ABCG1 targeting to mice; the unqualified claim that miR-33a targets ABCG1 omits that species restriction (passages 3–4, labeled Abstract). (LLM, conf=0.87)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Premisecitation§ AbstractTwo miR-33 genes are present in humans: miR-33b in intron 17 of Srebp-1 on chromosome 17, and miR-33a in intron 16 of Srebp-2 on chromosome 22.
“Two miR-33 genes are present in humans: miR-33b, which is present in intron 17 of the Srebp-1 gene on chromosome 17, and miR-33a, which is located in intron 16 of the Srebp-2 gene on chromosome 22.”
Quote in the paperNot a substantial claim3 of 4 sources checked- cites [11] Gerin I, et al. Expression of miR-33 from an SREBP2 intron inhibits cholesterol export and fatty acid oxidation. J Biol Chem. 2010;285:33652–33661. doi: 10.1074/jbc.M110.152090. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The section “miR-33a Is Produced from an Intron of the SREBP2 Gene” states that human miR-33a and miR-33b lie in introns of SREBP2 and SREBP1, respectively. Our copy does not give the claimed intron numbers or chromosome numbers, so those details are not supported by this source. (LLM, conf=0.86)
Experimental — accuracy not yet measured - cites [12] Marquart TJ, Allen RM, Ory DS, Baldán A. miR-33 links SREBP-2 induction to repression of sterol transporters. Proc Natl Acad Sci USA. 2010;107:12228–12232. doi: 10.1073/pnas.1005191107. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [13] Najafi-Shoushtari SH, et al. MicroRNA-33 and the SREBP host genes cooperate to control cholesterol homeostasis. Science. 2010;328:1566–1569. doi: 10.1126/science.1189123. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The Results identify two human miR-33 isoforms and place miR-33b in intron 17 of SREBP-1 on chromosome 17. They place miR-33a in intron 15 of SREBP-2 on chromosome 22, not intron 16 as the citing sentence states. (LLM, conf=0.95)
Experimental — accuracy not yet measured - cites [14] Rayner KJ, et al. MiR-33 contributes to the regulation of cholesterol homeostasis. Science. 2010;328:1570–1573. doi: 10.1126/science.1189862. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The passage labeled Abstract (page not supplied) identifies human miR-33a within intron 16 of SREBF2. Our copy does not state the chromosome 22 location or identify miR-33b in SREBF1 on chromosome 17, so it supports only part of the attributed sentence. (LLM, conf=0.87)
Experimental — accuracy not yet measured
Classified as probably not a substantial claim. May combine two claims.
Premisecitation§ ResultsSIRT6-deficient mice develop normally but succumb to lethal hypoglycemia early in life, suggesting an important role of SIRT6 in regulating glucose metabolism.
“SIRT6-deficient mice develop normally but succumb to lethal hypoglycemia early in life, suggesting an important role of SIRT6 in regulating glucose metabolism (25, 26).”
Quote in the paperSubstantial claim2 of 2 sources checked- cites [25] Xiao C, et al. SIRT6 deficiency results in severe hypoglycemia by enhancing both basal and insulin-stimulated glucose uptake in mice. J Biol Chem. 2010;285:36776–36784. doi: 10.1074/jbc.M110.168039. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The Results section reports that SIRT6-deficient mice were born without obvious defects, but weighed less from postnatal day 3 and developed other abnormalities; it does not support saying they developed normally. The Abstract and Results support early hypoglycemia-related deaths in many mutants and a role for SIRT6 in glucose metabolism, although some survived beyond the early post-weaning period. Page numbers are unavailable in our copy. (LLM, conf=0.88)
Experimental — accuracy not yet measured - cites [26] Zhong L, et al. The histone deacetylase Sirt6 regulates glucose homeostasis via Hif1alpha. Cell. 2010;140:280–293. doi: 10.1016/j.cell.2009.12.041. [DOI] [PMC free article] [PubMed] [Google Scholar] source
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisecitation§ ResultsHepatic-specific disruption of SIRT6 in mice results in fatty liver formation because of enhanced glycolysis and triglyceride synthesis.
“Interestingly, it has also been recently reported that hepatic-specific disruption of SIRT6 in mice results in fatty liver formation because of enhanced glycolysis and triglyceride synthesis (27).”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [27] Kim HS, et al. Hepatic-specific disruption of SIRT6 in mice results in fatty liver formation due to enhanced glycolysis and triglyceride synthesis. Cell Metab. 2010;12:224–236. doi: 10.1016/j.cmet.2010.06.009. [DOI] [PMC free article] [PubMed] [Google Scholar] source
Classified as probably not a substantial claim.
Premisecitation§ ResultsIRS2 is a cytoplasmic signaling molecule that mediates the effects of insulin, insulin-like growth factor 1, and other cytokines by acting as a molecular adaptor between receptor tyrosine kinases and downstream effectors.
“IRS2 is a cytoplasmic signaling molecule that mediates the effects of insulin, insulin-like growth factor 1, and other cytokines by acting as a molecular adaptor between receptor tyrosine kinases and downstream effectors (21–23).”
Quote in the paperSubstantial claim1 of 3 sources checked- cites [21] Haeusler RA, Accili D. The double life of Irs. Cell Metab. 2008;8:7–9. doi: 10.1016/j.cmet.2008.06.010. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The paper’s opening passage describes Irs1 and Irs2 as insulin-signaling adaptors that act downstream of insulin and IGF receptors to engage other signaling components. The Liver Conundrum section also describes Irs2 mediating insulin action. Our copy does not establish the claim’s additional assertion that Irs2 mediates the effects of other cytokines. (LLM, conf=0.86)
Experimental — accuracy not yet measured - cites [22] Thirone AC, Huang C, Klip A. Tissue-specific roles of IRS proteins in insulin signaling and glucose transport. Trends Endocrinol Metab. 2006;17:72–78. doi: 10.1016/j.tem.2006.01.005. [DOI] [PubMed] [Google Scholar] source
- cites [23] White MF. IRS proteins and the common path to diabetes. Am J Physiol Endocrinol Metab. 2002;283:E413–E422. doi: 10.1152/ajpendo.00514.2001. [DOI] [PubMed] [Google Scholar] source
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisecitation§ DiscussionmiR-33a and Srebp-2 are cotranscribed during states of cholesterol depletion.
“Although our previous work established that miR-33a and Srebp-2 are cotranscribed during states of cholesterol depletion (14)”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [14] Rayner KJ, et al. MiR-33 contributes to the regulation of cholesterol homeostasis. Science. 2010;328:1570–1573. doi: 10.1126/science.1189862. [DOI] [PMC free article] [PubMed] [Google Scholar] source
May combine two claims.
Premisecitation§ DiscussionDuring sterol-limited states, miR-33a is coincidentally generated with Srebp-2 transcription and works to increase cellular cholesterol levels by limiting cholesterol export through down-regulation of ABC transporters, ABCA1 and ABCG1.
“We and others have recently established that, during sterol-limited states, miR-33a is coincidentally generated with Srebp-2 transcription and works to increase cellular cholesterol levels by limiting cholesterol export through the down-regulation of ABC transporters, ABCA1 and ABCG1 (12–14).”
Quote in the paperSubstantial claim2 of 3 sources checked- cites [12] Marquart TJ, Allen RM, Ory DS, Baldán A. miR-33 links SREBP-2 induction to repression of sterol transporters. Proc Natl Acad Sci USA. 2010;107:12228–12232. doi: 10.1073/pnas.1005191107. [DOI] [PMC free article] [PubMed] [Google Scholar] source
- cites [13] Najafi-Shoushtari SH, et al. MicroRNA-33 and the SREBP host genes cooperate to control cholesterol homeostasis. Science. 2010;328:1566–1569. doi: 10.1126/science.1189123. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The Results report that cholesterol depletion increased both miR-33a and its SREBP-2 host gene in mouse macrophages, while reducing ABCA1 protein. They also show that miR-33a reduced cholesterol efflux and promoted intracellular cholesterol retention through ABCA1 repression. The passages do not support the additional claim that miR-33a down-regulates ABCG1. (LLM, conf=0.88)
Experimental — accuracy not yet measured - cites [14] Rayner KJ, et al. MiR-33 contributes to the regulation of cholesterol homeostasis. Science. 2010;328:1570–1573. doi: 10.1126/science.1189862. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The passages labeled Abstract report that miR-33 rises alongside SREBF2 during cholesterol depletion and represses cholesterol export through ABCA1. They also show ABCG1 repression in mouse cells, but state that human ABCG1 lacks miR-33 binding sites. The claim does not qualify its ABCG1 statement by species, despite referring specifically to miR-33a. (LLM, conf=0.88)
Experimental — accuracy not yet measured
Probably not a substantial claim: may not pass S3 (load-bearing).
Findingcitation§ DiscussionChanges in Srebp-2 and miR-33a transcription were quite small in the setting of cholesterol depletion.
“Although our previous work established that miR-33a and Srebp-2 are cotranscribed during states of cholesterol depletion (14), the changes in Srebp-2 and miR-33a transcription were quite small in this setting.”
Quote in the paperNot a substantial claim1 of 1 sources checked- cites [14] Rayner KJ, et al. MiR-33 contributes to the regulation of cholesterol homeostasis. Science. 2010;328:1570–1573. doi: 10.1126/science.1189862. [DOI] [PMC free article] [PubMed] [Google Scholar] source
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisecitation§ DiscussionSrebp-1c is transcribed at extremely high levels in response to insulin.
“By contrast, Srebp-1c is transcribed at extremely high levels in response to insulin (6, 28)”
Quote in the paperNot a substantial claim2 of 2 sources checked- cites [6] Horton JD, Goldstein JL, Brown MS. SREBPs: Activators of the complete program of cholesterol and fatty acid synthesis in the liver. J Clin Invest. 2002;109:1125–1131. doi: 10.1172/JCI15593. [DOI] [PMC free article] [PubMed] [Google Scholar] source
The sections “Transcriptional regulation of SREBP genes” and “SREBP-1c and the insulin/glucagon ratio” say that insulin regulates SREBP-1c transcription and increases its mRNA in rat hepatocytes. They do not establish that it is transcribed at “extremely high levels”; no page number is available in our copy. (LLM, conf=0.86)
Experimental — accuracy not yet measured - cites [28] Brown MS, Ye J, Goldstein JL. Medicine. HDL miR-ed down by SREBP introns. Science. 2010;328:1495–1496. doi: 10.1126/science.1192409. [DOI] [PMC free article] [PubMed] [Google Scholar] source
May combine two claims.
Findingown data§ AbstractOverexpression of miR-33a and -b reduces both fatty acid oxidation and insulin signaling in hepatic cell lines.
“Overexpression of miR-33a and -b reduces both fatty acid oxidation and insulin signaling in hepatic cell lines”
Quote in the paperSubstantial claim- Rests on an assumption: IRS2 is an essential component of the insulin-signaling pathway in the liver.
May combine two claims.
Findingown data§ AbstractInhibition of endogenous miR-33a and -b increases fatty acid oxidation and insulin signaling.
“whereas inhibition of endogenous miR-33a and -b increases these two metabolic pathways.”
Quote in the paperSubstantial claim- Rests on an assumption: IRS2 is an essential component of the insulin-signaling pathway in the liver.
May combine two claims.
Findingown data§ ResultsmiR-33b regulates CROT, CPT1a, HADHB, AMPKα, and IRS2 at the protein level.
“Similar regulation of these genes by miR-33b was also seen at the protein level (Fig. 1 C and D).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown data§ ResultsIn HepG2 cells, miR-33b overexpression down-regulated CROT, CPT1a, and AMPKα, but did not change expression of non-miR-33 targets.
“Whereas CROT, CPT1a, and AMPKα were predictably down-regulated by miR-33, we did not observe changes in the expression of non–miR-33 targets (Fig. 1E).”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Findingown data§ ResultsFRS2 is a predicted target of miR-33a and -b.
“Interestingly, FRS2 is also a predicted target of miR-33a and -b.”
Quote in the paperNot a substantial claimMay combine two claims.
Findingown data§ ResultsmiR-33b overexpression inhibits expression of GCK, FRS2, ACACA, and PPARG in Huh7 cells.
“Moreover, glucokinase (GCK), fibroblast growth factor receptor substrate 2 (FRS2), acetyl-CoA carboxylase-α (ACACA), and peroxisome proliferator-activated–γ (PPARG) were also inhibited (Fig. 3D).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown data§ ResultsOther genes containing putative miR-33 binding sites such as CS and HMGCR were not affected at the mRNA level or by 3′ UTR activity.
“Furthermore, other genes containing putative miR-33 binding sites such as citrate synthase (CS) and HMGCR were not affected either at the mRNA level (Fig. S5A) or by 3′ UTR activity (Fig. S5B).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown data§ ResultsMutation of the miR-33 target sites in Crot, Cpt1a, Hadhb, Ampkα, and Irs2 3′ UTR constructs relieved miR-33b repression, consistent with a direct interaction of miR-33b with these sites.
“Furthermore, mutation of the miR-33 target sites in these constructs relieved miR-33b repression of the 3′ UTR of Crot, Cpt1a, Hadhb, Ampkα, and Irs2, consistent with a direct interaction of miR-33b with these sites (Fig. S3).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown data§ ResultsIn Huh7 cells, insulin induces FoxO1-GFP translocation from the nucleus to the cytoplasm in control cells, whereas miR-33b overexpression reverses this distribution.
“Treatment with insulin induced FoxO1-GFP translocation from the nucleus to the cytoplasm in Con-miR–transfected cells (Fig. S7A Lower), whereas cells transfected with miR-33b had the cellular distribution reversed (Fig. S7B Lower).”
Quote in the paperSubstantial claimMay combine two claims.
Findingown data§ DiscussionAntagonism of endogenous miR-33a and -b up-regulates fatty acid oxidation and response to insulin in hepatocytes.
“Importantly, we show that antagonism of endogenous miR-33a and -b up-regulates fatty acid oxidation and response to insulin in hepatocytes”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Premisecitation§ ResultsFoxO1 is a well-defined target downstream of the conserved insulin/TOR signaling network that has important roles in the regulation of cellular growth, stress resistance, and energy homeostasis.
“FoxO1 is a well-defined target downstream of the conserved insulin/target of rapamycin (TOR) signaling network that has important roles in the regulation of processes as diverse as cellular growth, stress resistance, and energy homeostasis (24).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [24] Accili D, Arden KC. FoxOs at the crossroads of cellular metabolism, differentiation, and transformation. Cell. 2004;117:421–426. doi: 10.1016/s0092-8674(04)00452-0. [DOI] [PubMed] [Google Scholar] source
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Premisecitation§ ResultsCROT catalyzes the reversible transfer of fatty acyl between CoA and carnitine and provides a crucial step in the transport of medium and long-chain acyl-CoA out of the peroxisome to the cytosol and mitochondria.
“CROT, a carnitine acyltransferase that catalyzes the reversible transfer of fatty acyl between CoA and carnitine, provides a crucial step in the transport of medium and long-chain acyl-CoA out of the mammalian peroxisome to the cytosol and mitochondria (17–20).”
Quote in the paperNot a substantial claim0 of 4 sources checked- cites [17] Brady PS, Ramsay RR, Brady LJ. Regulation of the long-chain carnitine acyltransferases. FASEB J. 1993;7:1039–1044. doi: 10.1096/fasebj.7.11.8370473. [DOI] [PubMed] [Google Scholar] source
- cites [18] Eaton S, et al. The mitochondrial trifunctional protein: Centre of a beta-oxidation metabolon? Biochem Soc Trans. 2000;28:177–182. doi: 10.1042/bst0280177. [DOI] [PubMed] [Google Scholar] source
- cites [19] Mannaerts GP, Van Veldhoven PP, Casteels M. Peroxisomal lipid degradation via beta- and alpha-oxidation in mammals. Cell Biochem Biophys. 2000;32:73–87. doi: 10.1385/cbb:32:1-3:73. [DOI] [PubMed] [Google Scholar] source
- cites [20] Ramsay RR, Gandour RD. Selective modulation of carnitine long-chain acyltransferase activities. Kinetics, inhibitors, and active sites of COT and CPT-II. Adv Exp Med Biol. 1999;466:103–109. [PubMed] [Google Scholar]
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Premisecitation§ ResultsAMPKα stimulates hepatic fatty acid oxidation and ketogenesis.
“AMPKα stimulates hepatic fatty acid oxidation and ketogenesis (17–20).”
Quote in the paperNot a substantial claim0 of 4 sources checked- cites [17] Brady PS, Ramsay RR, Brady LJ. Regulation of the long-chain carnitine acyltransferases. FASEB J. 1993;7:1039–1044. doi: 10.1096/fasebj.7.11.8370473. [DOI] [PubMed] [Google Scholar] source
- cites [18] Eaton S, et al. The mitochondrial trifunctional protein: Centre of a beta-oxidation metabolon? Biochem Soc Trans. 2000;28:177–182. doi: 10.1042/bst0280177. [DOI] [PubMed] [Google Scholar] source
- cites [19] Mannaerts GP, Van Veldhoven PP, Casteels M. Peroxisomal lipid degradation via beta- and alpha-oxidation in mammals. Cell Biochem Biophys. 2000;32:73–87. doi: 10.1385/cbb:32:1-3:73. [DOI] [PubMed] [Google Scholar] source
- cites [20] Ramsay RR, Gandour RD. Selective modulation of carnitine long-chain acyltransferase activities. Kinetics, inhibitors, and active sites of COT and CPT-II. Adv Exp Med Biol. 1999;466:103–109. [PubMed] [Google Scholar]
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisecitation§ ResultsSREBP in flies regulates fatty acid metabolism.
“SREBP in flies regulates fatty acid metabolism (16), which is reminiscent of the function of the Srebp-1 gene in mammals (6).”
Quote in the paperNot a substantial claim0 of 1 sources checked- cites [16] Rawson RB. The SREBP pathway—insights from Insigs and insects. Nat Rev Mol Cell Biol. 2003;4:631–640. doi: 10.1038/nrm1174. [DOI] [PubMed] [Google Scholar] source
Probably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Premisecitation§ ResultsCPT1a mediates the transport of long fatty acids across the mitochondrial membrane by binding them to carnitine and is the rate-limiting enzyme that regulates fatty acid oxidation.
“CPT1a is a mitochondrial enzyme that mediates the transport of long fatty acids across the membrane by binding them to carnitine, and it is the rate-limiting enzyme that regulates fatty acid oxidation (17–20).”
Quote in the paperNot a substantial claim0 of 4 sources checked- cites [17] Brady PS, Ramsay RR, Brady LJ. Regulation of the long-chain carnitine acyltransferases. FASEB J. 1993;7:1039–1044. doi: 10.1096/fasebj.7.11.8370473. [DOI] [PubMed] [Google Scholar] source
- cites [18] Eaton S, et al. The mitochondrial trifunctional protein: Centre of a beta-oxidation metabolon? Biochem Soc Trans. 2000;28:177–182. doi: 10.1042/bst0280177. [DOI] [PubMed] [Google Scholar] source
- cites [19] Mannaerts GP, Van Veldhoven PP, Casteels M. Peroxisomal lipid degradation via beta- and alpha-oxidation in mammals. Cell Biochem Biophys. 2000;32:73–87. doi: 10.1385/cbb:32:1-3:73. [DOI] [PubMed] [Google Scholar] source
- cites [20] Ramsay RR, Gandour RD. Selective modulation of carnitine long-chain acyltransferase activities. Kinetics, inhibitors, and active sites of COT and CPT-II. Adv Exp Med Biol. 1999;466:103–109. [PubMed] [Google Scholar]
Not checked in the free run.
Probably not a substantial claim: may not pass S3 (load-bearing).
Premisecitation§ ResultsHADHB is the β-subunit of the mitochondrial trifunctional protein, which catalyzes the last three steps of mitochondrial β-oxidation of long-chain fatty acids.
“HADHB is the β-subunit of the mitochondrial trifunctional protein, which catalyzes the last three steps of mitochondrial β-oxidation of long-chain fatty acids”
Quote in the paperNot a substantial claim0 of 4 sources checked- cites [17] Brady PS, Ramsay RR, Brady LJ. Regulation of the long-chain carnitine acyltransferases. FASEB J. 1993;7:1039–1044. doi: 10.1096/fasebj.7.11.8370473. [DOI] [PubMed] [Google Scholar] source
- cites [18] Eaton S, et al. The mitochondrial trifunctional protein: Centre of a beta-oxidation metabolon? Biochem Soc Trans. 2000;28:177–182. doi: 10.1042/bst0280177. [DOI] [PubMed] [Google Scholar] source
- cites [19] Mannaerts GP, Van Veldhoven PP, Casteels M. Peroxisomal lipid degradation via beta- and alpha-oxidation in mammals. Cell Biochem Biophys. 2000;32:73–87. doi: 10.1385/cbb:32:1-3:73. [DOI] [PubMed] [Google Scholar] source
- cites [20] Ramsay RR, Gandour RD. Selective modulation of carnitine long-chain acyltransferase activities. Kinetics, inhibitors, and active sites of COT and CPT-II. Adv Exp Med Biol. 1999;466:103–109. [PubMed] [Google Scholar]
Not checked in the free run.
May combine two claims.
Premiseown data§ ResultsmiR-33a and -b have identical seed sequences but differ in 2 of 19 nt of the mature RNA.
“miR-33a and -b have identical seed sequences but differ in 2 of 19 nt of the mature RNA (Fig. S1C).”
Quote in the paperSubstantial claimProbably not a substantial claim: may not pass S3 (load-bearing).
Study design and conductnone given§ Materials and MethodsQuantitative values represent averages from at least 30 cells per well.
“All quantitative values represent averages from at least 30 cells per well.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S3 (load-bearing). May combine two claims.
Study design and conductnone given§ Materials and MethodsData are the mean ± SEM and are representative of three independent experiments.
“Data are the mean ± SEM and are representative of three independent experiments.”
Quote in the paperNot a substantial claimProbably not a substantial claim: may not pass S2 (checkable).
Interpretationown data§ DiscussionmiR-33a and -b may be an attractive therapeutic target for metabolic syndrome.
“suggesting that miR-33a and -b may be an attractive therapeutic target for metabolic syndrome.”
Quote in the paperNot a substantial claim
The paper relies on this without support.
IRS2 is an essential component of the insulin-signaling pathway in the liver.
“Moreover, miR-33a and -b also target the insulin receptor substrate 2, an essential component of the insulin-signaling pathway in the liver.”
The paper relies on this without support.
The Srebp1 genes of rats and mice lack miR-33b.
“because the Srebp1 genes of these animal models lack miR-33b.”
The paper relies on this without support.
AKT/PKB phosphorylates FoxO in three conserved sites, leading to FoxO cytoplasmic retention and transcriptional inactivation.
“One of the best documented is the AKT/protein kinase B (PKB) kinase, which phosphorylates FoxO in three conserved sites, leading to FoxO cytoplasmatic retention and transcriptional inactivation.”
The paper relies on this without support.
The Srebp gene of Drosophila controls fatty acid production.
“Interestingly, the Srebp gene of Drosophila controls fatty acid production”
The paper relies on this without support.
Drosophila neither synthesizes sterols nor expresses ABCA1.
“because Drosophila neither synthesizes sterols nor expresses ABCA1.”
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
miR-33 represses IRS2, PRKAA1, and SIRT6, genes important for maintenance of insulin sensitivity, cellular energy balance, and mitochondrial function.
“It represses insulin receptor substrate 2 (IRS2), protein kinase AMP-activated catalytic subunit a1 (PRKAA1), and sirtuin 6 (SIRT6) 34 , 35) , genes that are important for the maintenance of insulin sensitivity, cellular energy balance, and the mitochondrial function.”
From Critical Role of microRNA-33a/b in Cardiovascular and Metabolic Disease: Molecular Mechanisms and Therapeutic Perspectives (2026) · cites this paper as [34]
The Results report that miR-33 represses IRS2, AMPKα and SIRT6, and describe their roles in insulin signaling, fatty acid oxidation and glucose metabolism. The copy discusses mitochondrial fatty acid oxidation, but does not establish that these three genes maintain mitochondrial function as the citing sentence states. No page numbers are provided in the indexed passages. (LLM, conf=0.82)
Experimental — accuracy not yet measuredmiR-33a and miR-33b are co-transcribed along with SREBP-2 and SREBP-1 and work in concert with their host genes to help maintain proper lipid levels within the cell.
“This work led to the demonstration that miR-33a and miR-33b are co-transcribed along with SREBP-2 and SREBP-1, and work in concert with their host genes to help maintain proper lipid levels within the cell (Davalos et al., 2011; Marquart et al., 2010; Najafi-Shoushtari et al., 2010; Rayner et al., 2010).”
From Genetic dissection of the impact of miR-33a and miR-33b during the progression of atherosclerosis (2017) · cites this paper as Davalos et al., 2011
miR-33a and miR-33b help prevent further loss of lipids by targeting genes involved in cholesterol trafficking and efflux and fatty acid β-oxidation.
“miR-33a and miR-33b help prevent further loss of lipids by targeting genes involved in cholesterol trafficking and efflux”
From Genetic dissection of the impact of miR-33a and miR-33b during the progression of atherosclerosis (2017) · cites this paper as Davalos et al., 2011
miR-33 suppresses genes involved in mitochondrial β-oxidation, such as CPT1A, HADHB, and CROT.
“MiR-33 suppresses genes involved in mitochondrial β-oxidation, such as carnitine palmitoyltransferase 1A (CPT1A), hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit b (HADHB), and carnitine O-octanoyltransferase (CROT) 15 , 17 , 34 , 35) .”
From Critical Role of microRNA-33a/b in Cardiovascular and Metabolic Disease: Molecular Mechanisms and Therapeutic Perspectives (2026) · cites this paper as [34]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
Each contradiction between two passages listed here was confirmed by an independent check.
Oleate incubation is reported as both 24 and 12 hours
MajorThe results describe Huh7 cells incubated with oleate for 24 hours before starvation, whereas the immunohistochemistry method describes 12 hours before the same 24-hour starvation period.
“We next evaluated the accumulation of neutral lipids and lipid droplet formation in Huh7 cells incubated with oleate for 24 h and then starved for the next 24 h.”
“Huh7 cells were transfected with miR-33 or Con-miR as described above and incubated with 1 mM oleate for 12 h. Then, cells were washed two times with cold PBS and starved for the next 24 h.”
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“miR-33’s have also been shown to regulate fatty acid oxidation and glucose metabolism indicating that these micro RNAs may have a broader role in regulating metabolism(15, 16).”
BackgroundMetabolism of tissue macrophages in homeostasis and pathology
Wculek, S. K., Dunphy, G., Heras-Murillo, I., Mastrangelo, A., & Sancho, D. (2022) · Cellular & Molecular Immunology · doi:10.1038/s41423-021-00791-9 · Cited by 501 · see citing works
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“We previously demonstrated that miR-33 targets genes involved in FAO in hepatocytes, including Cpt1a , Crot , Hadhb , and Prkaa1 (27), and show here that miR-33 overexpression and inhibition in macrophages reciprocally regulates the expression of Cpt1a , Crot , Hadhb , and Prkaa1 mRNA (Figure 2C).”
InfluentialSelf-citationMicroRNA-mediated regulation of glucose and lipid metabolism
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Mycobacterium tuberculosis induces the miR-33 locus to reprogram autophagy and host lipid metabolism
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“…respectively (mice lack miR-33b) 22, 23, 24, 25 . miR-33a/b repress genes involved in cellular cholesterol export and fatty acid oxidation, including ABCA1, CROT, CPT1, HADHB and PRKAA1, thereby boosting cellular lipid levels and lowering plasma levels of high density lipoproteins 22, 23, 24, 25 .”
Self-citationSirt6 deficiency exacerbates podocyte injury and proteinuria through targeting Notch signaling
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Self-citationThe gut microbiota regulates white adipose tissue inflammation and obesity via a family of microRNAs
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“miR-33a/b negatively regulate the membrane transporter ABCA1 to reduce cholesterol efflux (32, 33) and target the transcripts CROT, CPT1a, HADHB, and AMPKa to dampen the β-oxidation of fatty acids (34).”
Geltink, R. I. K., O’Sullivan, D., Corrado, M., Bremser, A., Buck, M. D., Buescher, J. M., Firat, E., Zhu, X., Niedermann, G., Caputa, G., et al. (2017) · Cell · doi:10.1016/j.cell.2017.08.018 · Cited by 294 · see citing works
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“Several miRNAs, including miR-33a/b, -34a, -766, and -122, reduce SIRT6 mRNA stability [45,73,76,89,90].”
MicroRNA-148a regulates LDL receptor and ABCA1 expression to control circulating lipoprotein levels
Goedeke, L., Rotllán, N., Canfrán‐Duque, A., Aranda, J. F., Ramírez, C. M., Araldi, E., Lin, C., Anderson, N. N., Wagschal, A., de Cabo, R., et al. (2015) · Nature Medicine · doi:10.1038/nm.3949 · Cited by 270 · see citing works
“1) for 24 h using Lipofectamine 2000 62 .”
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“In any case, targeting miR-122 therapeutically may correct the imbalances seen in liver insulin resistance. miR-33a and miR-33b have been shown to regulate cholesterol homeostasis through interaction with sterol regulatory elementbinding proteins.48 Davalos et al.49 have recently reported the role of these two miRNAs…”
BackgroundInfluentialMicroRNAs in Metabolic Disease
Fernández-Hernando, C., Ramírez, C. M., Goedeke, L., & Suárez, Y. (2013) · Arteriosclerosis, Thrombosis, and Vascular Biology · doi:10.1161/atvbaha.112.300144 · Cited by 257 · see citing works
Self-citationMetformin elicits anticancer effects through the sequential modulation of DICER and c-MYC
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“miR-33 has also been shown to regulate fatty acid oxidation in hepatic cell lines.(20) Nevertheless, despite these important advances, the full extent of posttranscriptional control of lipid metabolism by miRNAs remains incompletely understood and has not been systematically investigated.”
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Control of Cholesterol Metabolism and Plasma High-Density Lipoprotein Levels by microRNA-144
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“Coincident with the transcription of Srebp1 and Srebp2, the embedded miR-33a and miR-33b are transcribed, and these negative regulators act to repress a number of genes involved in regulating cellular cholesterol export and fatty acid oxidation, including Abca1, Abcg1, Niemann-Pick C1 (Npc1), carnitine palmitoyltransf…”
BackgroundSelf-citationRegulation of cholesterol homeostasis
Goedeke, L., & Fernández-Hernando, C. (2011) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-011-0857-5 · Cited by 309 · see citing works
“Indeed, hepatic-specific disruption of SIRT6 in mice results in fatty liver formation because of enhanced glucolysis and triglyceride synthesis [21].”
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microRNA-33 regulates macrophage autophagy in atherosclerosis
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“In addition, a recent study suggested that microRNA-34a/b targets SIRT6 to regulate fatty acidmetabolism and insulin signaling (Dávalos et al., 2011).”
InfluentialRoles of microRNA on cancer cell metabolism
Chen, B., Li, H., Zeng, X., Yang, P., Liu, X., Zhao, X., & Liang, S. (2012) · Journal of Translational Medicine · doi:10.1186/1479-5876-10-228 · Cited by 205 · see citing works
DNA Methylation of Lipid-Related Genes Affects Blood Lipid Levels
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Karunakaran, D., Thrush, A. B., Nguyen, M.-A., Richards, L., Geoffrion, M., Singaravelu, R., Ramphos, E., Shangari, P., Ouimet, M., Pezacki, J. P., et al. (2015) · Circulation Research · doi:10.1161/circresaha.117.305624 · Cited by 188 · see citing works
Self-citationHubal, M. J., Nadler, E. P., Ferrante, S. C., Barberio, M. D., Suh, J., Wang, J. Z., Dohm, G. L., Pories, W. J., Mietus‐Snyder, M., & Freishtat, R. J. (2016) · Obesity · doi:10.1002/oby.21709 · Cited by 181 · see citing works
“Previous studies have demonstrated that multiple microRNAs are involved in glucose homeostasis, including miRs-33, 2103, 2107, and 229a/b (25-28).”
BackgroundMicroRNAs in adipose tissue: their role in adipogenesis and obesity
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The role of sirtuins in aging and age-related diseases
Wątroba, M., & Szukiewicz, D. (2015) · Advances in Medical Sciences · doi:10.1016/j.advms.2015.09.003 · Cited by 185 · see citing works
Mir-33 regulates cell proliferation and cell cycle progression
Cirera-Salinas, D., Pauta, M., Allen, R. M., Salerno, A., Ramírez, C., Chamorro-Jorganes, A., Wanschel, A., Lasunción, M. A., Morales-Ruiz, M., Suárez, Y., et al. (2012) · Cell Cycle · doi:10.4161/cc.11.5.19421 · Cited by 177 · see citing works
“miR33a and miR-33b are co-transcribed with its host genes, like many intronic miRNAs, and they target genes involved in regulating cholesterol homeostasis (Abca1, Abcg1 and Npc1)(20-22) and fatty acid metabolism (Ampk, Cpt1a, Crot, Hadhb and Sirt6 ).(23,24) These findings suggest that Srebp genomic loci, which encode…”
BackgroundSelf-citationThe Role of Peptide Hormones in Insect Lipid Metabolism
Toprak, U. (2020) · Frontiers in Physiology · doi:10.3389/fphys.2020.00434 · Cited by 174 · see citing works
Non-coding RNAs: the new central dogma of cancer biology
Saw, P. E., Xu, X., Chen, J., & Song, E. (2020) · Science China Life Sciences · doi:10.1007/s11427-020-1700-9 · Cited by 176 · see citing works
“miR-33 Inhibits the translation process of several transcripts encoding enzymes in fatty acid β-oxidation such as CPT1A, CROT, and HADHB, thus disturbing fatty acid degradation N/A (Dávalos et al., 2011)”
Mitochondrial CPT1A: Insights into structure, function, and basis for drug development
Liang, K. (2023) · Frontiers in Pharmacology · doi:10.3389/fphar.2023.1160440 · Cited by 156 · see citing works
“Overexpression of miR-33a/b can reduce FAO by downregulating CPT1A and lead to the accumulation of triglycerides in human hepatic cells (Davalos et al., 2011).”
BackgroundRecent advances in pharmacotherapy for hypertriglyceridemia
Sahebkar, A., Chew, G. T., & Watts, G. F. (2014) · Progress in Lipid Research · doi:10.1016/j.plipres.2014.07.002 · Cited by 166 · see citing works
Recent Highlights of ATVB Atherosclerosis
Lu, H. S., & Daugherty, A. (2015) · Arteriosclerosis, Thrombosis and Vascular Biology · doi:10.1161/atvbaha.115.305380 · Cited by 76 · see citing works
Allen, R. M., Marquart, T. J., Albert, C. J., Suchy, F. J., Wang, D. Q. ‐., Ananthanarayanan, M., Ford, D. A., & Baldán, Á. (2012) · EMBO Molecular Medicine · doi:10.1002/emmm.201201228 · Cited by 159 · see citing works
SIRT6 in Aging, Metabolism, Inflammation and Cardiovascular Diseases
Guo, Z., Li, P., Ge, J., & Li, H. (2022) · Aging and Disease · doi:10.14336/ad.2022.0413 · Cited by 160 · see citing works
“At the translational level, endogenous microRNAs (miRNAs), particularly miR-33a/b, miR-122, miR-330-5p and miR-495, can regulate SIRT6 translation by binding the 3’-untranslated region (UTR) of SIRT6 [45-48].”
BackgroundMultiple Regulatory Layers of SREBP1/2 by SIRT6
Elhanati, S., Kanfi, Y., Varvak, A., Roichman, A., Carmel-Gross, I., Barth, S., Gibor, G., & Cohen, H. Y. (2013) · Cell Reports · doi:10.1016/j.celrep.2013.08.006 · Cited by 155 · see citing works
MicroRNA 33 Regulates Glucose Metabolism
Ramírez, C. M., Goedeke, L., Rotllan, N., Yoon, J.-H., Cirera-Salinas, D., Mattison, J. A., Suárez, Y., de Cabo, R., Gorospe, M., & Fernández-Hernando, C. (2013) · Molecular and Cellular Biology · doi:10.1128/mcb.00016-13 · Cited by 154 · see citing works
“It is well established that agonists of LXR, such as oxysterols or insulin, lead to the hepatic induction of SREBP1c and more recently miR-33b (28).”
BackgroundSelf-citationmiRNAs in atherosclerotic plaque initiation, progression, and rupture
Andreou, I., Sun, X., Stone, P. H., Edelman, E. R., & Feinberg, M. W. (2015) · Trends in Molecular Medicine · doi:10.1016/j.molmed.2015.02.003 · Cited by 153 · see citing works
“Mechanistically, these miRNAs were demonstrated to regulate key genes involved in fatty acid metabolism and insulin signaling [54].”
The Epigenetic Connection Between the Gut Microbiome in Obesity and Diabetes
Sharma, M., Li, Y., Stoll, M. L., & Tollefsbol, T. O. (2020) · Frontiers in Genetics · doi:10.3389/fgene.2019.01329 · Cited by 152 · see citing works
“Another type of ncRNA, miRNAs, also play crucial roles in maintaining metabolic homeostasis and in development of obesity and insulin resistance (Davalos et al., 2011; Trajkovski et al., 2011), This has also been shown in a recent study by Virtue et al. that focused on the interplay between miRNAs…”
ResultThe Role of MicroRNAs in Cholesterol Efflux and Hepatic Lipid Metabolism
Moore, K. J., Rayner, K. J., Suárez, Y., & Fernandez-Hernando, C. F. (2011) · Annual Review of Nutrition · doi:10.1146/annurev-nutr-081810-160756 · Cited by 152 · see citing works
Self-citationGalicia-Garcia, U., Jebari, S., Larrea-Sebal, A., Uribe, K., Siddiqi, H., Ostolaza, H., Benito-Vicente, A., & Martín, C. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21134725 · Cited by 141 · see citing works
The long noncoding RNA CHROME regulates cholesterol homeostasis in primate
Hennessy, E., van Solingen, C., Scacalossi, K. R., Ouimet, M., Afonso, M., Prins, J., Koelwyn, G., Sharma, M., Ramkhelawon, B., Carpenter, S., et al. (2018) · Nature Metabolism · doi:10.1038/s42255-018-0004-9 · Cited by 132 · see citing works
Self-citationGoedeke, L., Salerno, A., Ramírez, C. M., Guo, L., Allen, R. M., Yin, X., Langley, S. R., Esau, C., Wanschel, A., Fisher, E. A., et al. (2014) · EMBO Molecular Medicine · doi:10.15252/emmm.201404046 · Cited by 145 · see citing works
“In addition to the effect of miR-33 in controlling cholesterol efflux and HDL-C synthesis, miR-33 also regulates the expression of genes involved in fatty acid oxidation and insulin signaling, including CROT , CPT1A , HADHB , AMPK, and IRS2 (Gerin et al , 2010; Davalos et al , 2011).”
Self-citationMacrophage metabolism in atherosclerosis
Bories, G. F. P., & Leitinger, N. (2017) · FEBS Letters · doi:10.1002/1873-3468.12786 · Cited by 145 · see citing works
Epigenetics in NAFLD/NASH: Targets and therapy
Sodum, N., Kumar, G., Bojja, S. L., Kumar, N., & Rao, C. M. (2021) · Pharmacological Research · doi:10.1016/j.phrs.2021.105484 · Cited by 145 · see citing works
MicroRNAs: Emerging roles in adipogenesis and obesity
Peng, Y., Yu, S., Li, H., Xiang, H., Peng, J., & Jiang, S. (2014) · Cellular Signalling · doi:10.1016/j.cellsig.2014.05.006 · Cited by 139 · see citing works
A Regulatory Role for MicroRNA 33* in Controlling Lipid Metabolism Gene Expression
Goedeke, L., Vales-Lara, F. M., Fenstermaker, M., Cirera-Salinas, D., Chamorro-Jorganes, A., Ramírez, C. M., Mattison, J. A., de Cabo, R., Suárez, Y., & Fernández-Hernando, C. (2013) · Molecular and Cellular Biology · doi:10.1128/mcb.01714-12 · Cited by 140 · see citing works
“works to reduce cellular fatty acid oxidation by targeting carnitine O-octanoyltransferase (CROT), carnitine palmitoyltransferase 1A (CPT1a), hydroxyacyl coenzyme A (hydroxyacyl-CoA) dehydrogenase subunit beta (HADHB), and AMP kinase subunit alpha (AMPK ), as well as insulin signaling, by targeting insulin receptor su…”
BackgroundInfluentialSelf-citationThe Vasculature in Prediabetes
Wasserman, D. H., Wang, T. J., & Brown, N. J. (2018) · Circulation Research · doi:10.1161/circresaha.118.311912 · Cited by 137 · see citing works
miRNA Signature in NAFLD: A Turning Point for a Non-Invasive Diagnosis
Dongiovanni, P., Meroni, M., Longo, M., Fargion, S. R., & Fracanzani, A. L. (2018) · International Journal of Molecular Sciences · doi:10.3390/ijms19123966 · Cited by 138 · see citing works
“miR-33a and miR-33b are positive regulators of these two transcription factors and both target the α-subunit of the AMP-activated protein kinase (AMPK), inhibiting its expression [65,66].”
BackgroundA miR‐34a‐SIRT6 axis in the squamous cell differentiation network
Lefort, K., Brooks, Y., Ostano, P., Cario, M., Calpini, V., Guinea‐Viniegra, J., Albinger‐Hegyi, A., Hoetzenecker, W., Kolfschoten, I., Wagner, E. F., et al. (2013) · The EMBO Journal · doi:10.1038/emboj.2013.156 · Cited by 135 · see citing works
Epigenetics in non-alcoholic fatty liver disease
Lee, J.-H., Kim, Y., Friso, S., & Choi, S. (2016) · Molecular Aspects of Medicine · doi:10.1016/j.mam.2016.11.008 · Cited by 134 · see citing works
Sirtuin‐dependent epigenetic regulation in the maintenance of genome integrity
Bosch‐Presegué, L., & Vaquero, A. (2015) · The FEBS Journal · doi:10.1111/febs.13053 · Cited by 132 · see citing works
Genetic dissection of the impact of miR-33a and miR-33b during the progression of atherosclerosis
Price, N. L., Rotllan, N., Canfrán-Duque, A., Zhang, X., Pati, P., Arias, N., Moen, J., Mayr, M., Ford, D. A., Baldán, Á., et al. (2017) · Cell reports · doi:10.1016/j.celrep.2017.10.023 · Cited by 129 · see citing works
“…led to the demonstration that miR-33a and miR-33b are co-transcribed along with SREBP-2 and SREBP-1 and work in concert with their host genes to help maintain proper lipid levels within the cell (Dávalos et al., 2011; Marquart et al., 2010; Najafi-Shoushtari et al., 2010; Rayner et al., 2010).”
BackgroundInfluentialSelf-citationWijesekara, N., Zhang, L.-H., Kang, M. H., Abraham, T., Bhattacharjee, A., Warnock, G., Verchere, C., & Hayden, M. (2012) · Diabetes · doi:10.2337/db11-0944 · Cited by 141 · see citing works
Nigi, L., Grieco, G. E., Ventriglia, G., Brusco, N., Mancarella, F., Formichi, C., Dotta, F., & Sebastiani, G. (2018) · International Journal of Molecular Sciences · doi:10.3390/ijms19123705 · Cited by 126 · see citing works
“Although six IRS isoforms are known, the most functionally active in metabolic processes are IRS1 and IRS2.”
BackgroundInfluentialLiver microRNAs: potential mediators and biomarkers for metabolic and cardiovascular disease?
Willeit, P., Skroblin, P., Kiechl, S., Fernández-Hernando, C., & Mayr, M. (2016) · European Heart Journal · doi:10.1093/eurheartj/ehw146 · Cited by 124 · see citing works
MicroRNAs in metabolism and metabolic diseasesPreprint
Rottiers, V., Najafi-Shoushtari, S. H., Kristo, F., Gurumurthy, S., Zhong, L., Li, Y.-X., Cohen, D. E., Gerszten, R. E., Bardeesy, N., Mostoslavsky, R., et al. (2011) · Cold Spring Harbor Symposia on Quantitative Biology · doi:10.1101/sqb.2011.76.011049 · Cited by 130 · see citing works
He, J., Zhang, G.-Y., Pang, Q., Yu, C., Xiong, J., Zhu, J., & Chen, F.-L. (2017) · The FEBS Journal · doi:10.1111/febs.14055 · Cited by 119 · see citing works
“cholesterol homeostasis and has atherosclerotic-promoting properties [35-37].”
Mechanosensitive microRNAs—role in endothelial responses to shear stress and redox state
Marin, T., Gongol, B., Chen, Z., Woo, B. J., Subramaniam, S., Chien, S., & Shyy, J. Y.-J. (2013) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2013.05.034 · Cited by 122 · see citing works
“Given that miR-217 down-regulates SIRT1 [57], whilst miR-33 inhibits AMPK expression [58], these miRs may also take part in the negative effect of OS on eNOS.”
BackgroundAutophagy and Its Interaction With Intracellular Bacterial Pathogens
Siqueira, M. D. S., Ribeiro, R. D. M., & Travassos, L. H. (2018) · Frontiers in Immunology · doi:10.3389/fimmu.2018.00935 · Cited by 120 · see citing works
“One of these miRNAs, miR33 has been shown to the regulation of fatty acid metabolism and insulin signaling (122).”
BackgroundZhou, Y., Huang, Z.-F., Wu, S., et al. (2014) · Journal of Experimental & Clinical Cancer Research · doi:10.1186/1756-9966-33-12 · Cited by 119 · see citing works
Rottiers, V., Obad, S., Petri, A., McGarrah, R., Lindholm, M. W., Black, J. C., Sinha, S., Goody, R. J., Lawrence, M. S., deLemos, A. S., et al. (2013) · Science Translational Medicine · doi:10.1126/scitranslmed.3006840 · Cited by 121 · see citing works
Rhodes, L. V., Martin, E. C., Segar, H. C., Miller, D. F., Buechlein, A. M., Rusch, D. B., Nephew, K. P., Burow, M. E., & Collins‐Burow, B. M. (2015) · Oncotarget · doi:10.18632/oncotarget.3184 · Cited by 116 · see citing works
“06 Regulation of metabolism and cell cycle [70, 71]”
Kurtz, C., Peck, B. C. E., Fannin, E. E., Beysen, C., Miao, J., Landstreet, S. R., Ding, S., Turaga, V., Lund, P., Turner, S., et al. (2014) · Diabetes · doi:10.2337/db13-1015 · Cited by 127 · see citing works
“Another group of studies demonstrated that miR-33 modulates lipoprotein metabolism in mice (13–17) and nonhuman primates (18), as well as insulin signaling in cultured human hepatocytes (19).”
BackgroundXenomiRs and miRNA homeostasis in health and disease
Witwer, K. W. (2012) · RNA Biology · doi:10.4161/rna.21619 · Cited by 115 · see citing works
Liu, W., Cao, H., Cheng, Y., Chang, C., Lü, M., Jing, Y., Zhang, D., Yao, X., Duan, Z., Xia, H., et al. (2014) · Nature Communications · doi:10.1038/ncomms6684 · Cited by 115 · see citing works
Jun, S., Datta, S., Wang, L., Pegany, R. B., Cano, M., & Handa, J. T. (2018) · Experimental Eye Research · doi:10.1016/j.exer.2018.09.023 · Cited by 115 · see citing works
Micromanaging aerobic respiration and glycolysis in cancer cells
Orang, A., Petersen, J., McKinnon, R. A., & Michael, M. (2019) · Molecular Metabolism · doi:10.1016/j.molmet.2019.01.014 · Cited by 115 · see citing works
“miR-31 TP53 Breast Cancer S [185] miR-3151 TP53 Malignant Melanoma S [186] miR-32 PTEN Hepatocellular Carcinoma [287] miR-320a MYC Hepatocellular Carcinoma S [187] miR-33 TP53 Hematopoietic Stem Cells S [188] miR-337 PTEN Endometrial Carcinoma S [189] miR-338 mTOR Colon Cancer S [190] miR-339 MDM2, SIRT2 Breast Cancer…”
BackgroundMicroRNA expression patterns in the bovine mammary gland are affected by stage of lactation
Wang, M., Moisá, S. J., Khan, M. J., Wang, J., Bu, D., & Loor, J. J. (2012) · Journal of Dairy Science · doi:10.3168/jds.2012-5748 · Cited by 113 · see citing works
“Additional work has revealed a role for miR-33a/b in the regulation of insulin signaling (Dávalos et al., 2011).”
MicroRNAs and Type 2 Diabetes/Obesity
Dehwah, M. A. S., Xu, A., & Huang, Q. (2011) · Journal of genetics and genomics/Journal of Genetics and Genomics · doi:10.1016/j.jgg.2011.11.007 · Cited by 111 · see citing works
microRNAs in lipoprotein metabolism and cardiometabolic disorders
Rotllán, N., Price, N. L., Pati, P., Goedeke, L., & Fernandez-Hernando, C. F. (2016) · Atherosclerosis · doi:10.1016/j.atherosclerosis.2016.01.025 · Cited by 111 · see citing works
Self-citationMarquart, T. J., Wu, J., Lusis, A. J., & Baldán, Á. (2013) · Arteriosclerosis, Thrombosis, and Vascular Biology · doi:10.1161/atvbaha.112.300639 · Cited by 110 · see citing works
Price, N. L., Singh, A. K., Rotllan, N., Goedeke, L., Wing, A., Canfrán-Duque, A., Diaz-Ruiz, A., Araldi, E., Baldán, Á., Camporez, J.-P., et al. (2018) · Cell Reports · doi:10.1016/j.celrep.2018.01.074 · Cited by 110 · see citing works
“…found to target genes involved in a number of other important metabolic functions including fatty acid metabolism (CPT1, CROT, HADHb), insulin signaling (IRS2), and mitochondrial function (AMPK, PGC1a) (Dávalos et al., 2011; Gerin et al., 2010; Karunakaran et al., 2015; Ouimet et al., 2015, 2017).”
Self-citationMechanistic Role of MicroRNAs in Coupling Lipid Metabolism and Atherosclerosis
Novák, J., Olejníčková, V., Tkáčová, N., & Santulli, G. (2015) · Advances in experimental medicine and biology · doi:10.1007/978-3-319-22380-3_5 · Cited by 109 · see citing works
“Hypothetically, targeting Sirtuin-6 (SIRT6), a protein known to be involved in triglycerides metabolism, by miR-33 may also affect triglycerides metabolism [ 69 ], similarly to targeting AMPKα, which is known to stimulate β-oxidation and even ketogenesis in the liver [ 69 ].”
Low Vitamin B12 and Lipid Metabolism: Evidence from Pre-Clinical and Clinical Studies
Boachie, J., Adaikalakoteswari, A., Samavat, J., & Saravanan, P. (2020) · Nutrients · doi:10.3390/nu12071925 · Cited by 106 · see citing works
“Genes regulating hepatic metabolism of fatty acids and/or insulin signaling may be repressed by some miRNAs regulating the levels of HDL, TG and insulin [102].”
BackgroundMiR-224 impairs adipocyte early differentiation and regulates fatty acid metabolism
Peng, Y., Xiang, H., Chen, C., Zheng, R., Chai, J., Peng, J., & Jiang, S. (2013) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2013.04.029 · Cited by 104 · see citing works
Vitiello, M., Zullo, A., Servillo, L., Mancini, F. P., Borriello, A., Giovane, A., Ragione, F. D., D’Onofrio, N., & Balestrieri, M. L. (2016) · Ageing Research Reviews · doi:10.1016/j.arr.2016.10.008 · Cited by 101 · see citing works
Sirtuins' control of autophagy and mitophagy in cancer
Aventaggiato, M., Vernucci, E., Barreca, F., Russo, M. A., & Tafani, M. (2020) · Pharmacology & Therapeutics · doi:10.1016/j.pharmthera.2020.107748 · Cited by 103 · see citing works
microRNAs in the onset and development of cardiovascular disease
Vickers, K. C., Rye, K., & Tabet, F. (2013) · Clinical Science · doi:10.1042/cs20130203 · Cited by 101 · see citing works
“miR-33a/b was also found to play a key role in fatty acid β-oxidation by directly targeting CROT (carnitine O-octanyl transferase), CPT1A (carnitine palmitoyltransferase 1A) and HADHB (hydroxyacyl-CoA dehydrogenase-3-ketoacyl-CoA thiolase-enoyl-CoA hydratase β-subunit) [38,46].”
BackgroundInterplay of mitochondrial metabolism and microRNAs
Geiger, J., & Dalgaard, L. T. (2016) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-016-2342-7 · Cited by 101 · see citing works
Chen, Z., Shentu, T., Wen, L., Johnson, D. A., & Shyy, J. Y.-J. (2013) · Antioxidants and Redox Signaling · doi:10.1089/ars.2012.4803 · Cited by 99 · see citing works
“AAA¼ abdominal aortic aneurysm ABCA1¼ATP-binding cassette, subfamily A, member 1 AGEs¼ advanced glycation endproducts AMPK¼AMP-activated protein kinase AREs¼ antioxidant-responsive elements AROS¼ active regulator of SIRT1 AT1R¼ angiotensin II type 1 receptor CBP¼CREB-binding protein CDK1¼ cyclin-dependent kinase 1 CK2…”
BackgroundInfluentialmiR-33a functions as a tumor suppressor in melanoma by targeting HIF-1α
Zhou, J., Xu, D., Xie, H., Tang, J., Liu, R., Li, J., Wang, S., Chen, X., Su, J., Zhou, X., et al. (2015) · Cancer Biology & Therapy · doi:10.1080/15384047.2015.1030545 · Cited by 97 · see citing works
Price, N., Rotllan, N., Zhang, X.-B., Canfrán-Duque, A., Nottoli, T., Suárez, Y., & Fernández-Hernando, C. (2019) · Circulation Research · doi:10.1161/circresaha.118.314415 · Cited by 80 · see citing works
Self-citationJia, D., Park, J. H., Kaur, H., Jung, K. H., Yang, S., Tripathi, S., Galbraith, M., Deng, Y., Jolly, M. K., Kaipparettu, B. A., et al. (2021) · British Journal of Cancer · doi:10.1038/s41416-021-01385-y · Cited by 97 · see citing works
“miR-33, which inhibits EMT by targeting SNAIL and ZEB,(50) can inhibit FAO by targeting the genes encoding carnitine palmitoyltransferase IA (CPT1A) and 5’ AMP-activated protein kinase (AMPK) α.(51) As expected, the effects are directly opposite to those of TGF-β on both glycolysis and FAO upon induction of EMT.”
BackgroundSacco, J., & Adeli, K. (2012) · Current Opinion in Lipidology · doi:10.1097/mol.0b013e3283534c9f · Cited by 96 · see citing works
“In mice, the existence of only one miR-33 within the Srebf2 gene is evident, which is comparable to the human miR-33a [21].”
BackgroundMitochondrial noncoding RNA-regulatory network in cardiovascular disease
(CA17129), T. E.-C. C. A., Jusić, A., & Devaux, Y. (2020) · Basic Research in Cardiology · doi:10.1007/s00395-020-0783-5 · Cited by 94 · see citing works
- Authors
- Dávalos, A., Goedeke, L., Smibert, P., Ramírez, C. M., Warrier, N. P., Andreo, U., Cirera-Salinas, D., Rayner, K., Suresh, U., Pastor-Pareja, J. C., Esplugues, E., Fisher, E. A., Penalva, L. O. F., Moore, K. J., Suárez, Y., Lai, E. C., & Fernández-Hernando, C.
- Affiliations
- NYU Langone Health (US)
- Department of Developmental Biology, Sloan–Kettering Institute, New York, NY 10065;
- Departments of Medicine and Cell Biology, Leon H. Charney Division of Cardiology and the Marc and Ruti Bell Vascular Biology and Disease Program, New York University School of Medicine, New York, NY 10016;
- The University of Texas at San Antonio Health Science Center (US)
- Yale University (US)
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2011-05-16
- Volume
- 108
- Issue
- 22
- Pages
- 9232-9237
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC3107310
- OpenAlex
- W2030354790
- Semantic Scholar
- 4a7c3442c0dc1e42524b4ece3797a409b5d0dd26
- Cited by
- 670
- References
- 38
- Citations by year
- 2026: 15 · 2025: 23 · 2024: 24 · 2023: 46 · 2022: 35 · 2021: 48 · 2020: 49 · 2019: 32 · 2018: 45 · 2017: 39 · 2016: 64 · 2015: 56 · 2014: 71 · 2013: 60 · 2012: 52
- FWCI
- 19.00
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (submittedVersion)
- Funders
- American Heart Association
- Deutsche Forschungsgemeinschaft (EXC257)
- National Institutes of Health (5r01ag020255-10, 2r01gm083300-18)
- National Institute on Aging (R01AG20255, R01-AG020255)
- National Heart, Lung, and Blood Institute (R01 HL58541, R01HL16063, P30HL101270, R01HL058541, R01HL107953)
- National Institute of General Medical Sciences (R01-GM083300)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › MicroRNA in disease regulation
- Health Sciences › Medicine › Surgery › Cholesterol and Lipid Metabolism
- Health Sciences › Medicine › Cardiology and Cardiovascular Medicine › Lipid metabolism and disorders
- Keywords
- miR-33a, miR-33b, microRNA, fatty acid oxidation, insulin signaling, insulin receptor substrate 2, SIRT6, AMPK, CPT1A, hydroxyacyl-CoA dehydrogenase, SREBP, cholesterol homeostasis, metabolic syndrome, atherosclerosis, HDL cholesterol, triglycerides, liver, miRNA inhibitors
- MeSH terms
- Animals, Cardiovascular Diseases, Cholesterol, Cytoplasm, Drosophila melanogaster, Fatty Acids, Homeostasis, Humans, Immunohistochemistry, Insulin, Lipids, Phosphorylation, RNA Processing, Post-Transcriptional, Signal Transduction, MicroRNAs
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