The DOI matches its Crossref record; 55 of the 55 references it cites were found in a registry or an index.
Diversity of Bifidobacteria within the Infant Gut Microbiota
Open accessAbstract
BACKGROUND: The human gastrointestinal tract (GIT) represents one of the most densely populated microbial ecosystems studied to date. Although this microbial consortium has been recognized to have a crucial impact on human health, its precise composition is still subject to intense investigation. Among the GIT microbiota, bifidobacteria represent an important commensal group, being among the first microbial colonizers of the gut. However, the prevalence and diversity of members of the genus Bifidobacterium in the infant intestinal microbiota has not yet been fully characterized, while some inconsistencies exist in literature regarding the abundance of this genus. METHODS/PRINCIPAL FINDINGS: In the current report, we assessed the complexity of the infant intestinal bifidobacterial population by analysis of pyrosequencing data of PCR amplicons derived from two hypervariable regions of the 16 S rRNA gene. Eleven faecal samples were collected from healthy infants of different geographical origins (Italy, Spain or Ireland), feeding type (breast milk or formula) and mode of delivery (vaginal or caesarean delivery), while in four cases, faecal samples of corresponding mothers were also analyzed. CONCLUSIONS: In contrast to several previously published culture-independent studies, our analysis revealed a predominance of bifidobacteria in the infant gut as well as a profile of co-occurrence of bifidobacterial species in the infant's intestine.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“PS infants showed an earlier and more robust colonisation of infant-associated Bifidobacterium species, particularly B. breve and B. longum subsp. infantis, compared to NPS infants51–53.”
From Impact of early life antibiotic and probiotic treatment on gut microbiome and resistome of very-low-birth-weight preterm infants. (2025) · cites this paper as [52]
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Cytoscape: A software Environment for integrated models of biomolecular interaction networks
Shannon, P., Markiel, A., Ozier, O., Baliga, N. S., Wang, J. T., Ramage, D., Amin, N., Schwikowski, B., & Ideker, T. (2003) · Genome Research · doi:10.1101/gr.1239303 · Cited by 51,888
QIIME allows analysis of high-throughput community sequencing data
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F. D., Costello, E. K., Fierer, N., Peña, A. G., Goodrich, J. K., Gordon, J. I., et al. (2010) · Nature Methods · doi:10.1038/nmeth.f.303 · Cited by 34,887 · cited 3×
“All reads were classified to the lowest possible taxonomic rank using QIIME and a reference dataset from the Ribosomal Database Project [31].”
MethodSearch and clustering orders of magnitude faster than BLAST
Edgar, R. C. (2010) · Bioinformatics · doi:10.1093/bioinformatics/btq461 · Cited by 21,098
An obesity-associated gut microbiome with increased capacity for energy harvest
Turnbaugh, P. J., Ley, R. E., Mahowald, M. A., Magrini, V., Mardis, E. R., & Gordon, J. I. (2006) · Nature · doi:10.1038/nature05414 · Cited by 12,444 · cited 1×
“Furthermore, microbial dysbiosis has been linked to several functional gut disorders, such as inflammatory bowel disease [4,5], irritable bowel syndrome [6], stomach cancer [7], mucosa-associated lymphoid tissue lymphoma [8], obesity [9,10] and necrotizing enterocolitis [11].”
BackgroundDiversity of the Human Intestinal Microbial Flora
Eckburg, P. B., Bik, E. M., Bernstein, C. N., Purdom, E., Dethlefsen, L., Sargent, M., Gill, S. R., Nelson, K. E., & Relman, D. A. (2005) · Science · doi:10.1126/science.1110591 · Cited by 7,913 · cited 2×
“2b), confirming previously published data on the fecal microbiota of adult subjects [13].”
BackgroundResultDietary Modulation of the Human Colonic Microbiota: Introducing the Concept of Prebiotics
Gibson, G. R., & Roberfroid, M. B. (1995) · Journal of Nutrition · doi:10.1093/jn/125.6.1401 · Cited by 7,659 · cited 1×
“infantis) are genetically adapted to utilize hostproduced glycans like mucins and human milk oligosaccharides [50–53].”
BackgroundHost-Bacterial Mutualism in the Human Intestine
Bäckhed, F., Ley, R. E., Sonnenburg, J. L., Peterson, D. A., & Gordon, J. I. (2005) · Science · doi:10.1126/science.1104816 · Cited by 5,277 · cited 1×
“. Studies employing murine models have highlighted the critical role played by the gut microbiota in the development of a properly functioning gastrointestinal tract”
BackgroundThe Ribosomal Database Project: improved alignments and new tools for rRNA analysis
Cole, J. R., Wang, Q., Cardenas, E., Fish, J., Chai, B., Farris, R. J., Kulam-Syed-Mohideen, A. S., McGarrell, D. M., Marsh, T. L., Garrity, G. M., et al. (2008) · Nucleic Acids Research · doi:10.1093/nar/gkn879 · Cited by 4,873 · cited 1×
“All reads were classified to the lowest possible taxonomic rank using QIIME and a reference dataset from the Ribosomal Database Project [31].”
MethodSokol, H., Pigneur, B., Watterlot, L., Lakhdari, O., Bermúdez-Humarán, L. G., Gratadoux, J.-J., Blugeon, S., Bridonneau, C., Furet, J.-P., Corthier, G., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0804812105 · Cited by 4,413 · cited 1×
“Furthermore, microbial dysbiosis has been linked to several functional gut disorders, such as inflammatory bowel disease [4,5], irritable bowel syndrome [6], stomach cancer [7], mucosa-associated lymphoid tissue lymphoma [8], obesity [9,10] and necrotizing enterocolitis [11].”
BackgroundHelicobacter pylori Infection and the Risk of Gastric Carcinoma
Parsonnet, J., FRIEDMAN, G. D., Vandersteen, D. P., Chang, Y., Vogelman∥, J. H., Orentreich∥, N., & Sibley, R. K. (1991) · New England Journal of Medicine · doi:10.1056/nejm199110173251603 · Cited by 3,893 · cited 1×
“Furthermore, microbial dysbiosis has been linked to several functional gut disorders, such as inflammatory bowel disease [4,5], irritable bowel syndrome [6], stomach cancer [7], mucosa-associated lymphoid tissue lymphoma [8], obesity [9,10] and necrotizing enterocolitis [11].”
BackgroundDevelopment of the Human Infant Intestinal Microbiota
Palmer, C., Bik, E. M., DiGiulio, D. B., Relman, D. A., & Brown, P. O. (2007) · PLoS Biology · doi:10.1371/journal.pbio.0050177 · Cited by 2,877 · cited 3×
“abundance or even apparent absence of bifidobacteria [16,19].”
BackgroundSuccession of microbial consortia in the developing infant gut microbiome
Koenig, J. E., Spor, A., Scalfone, N., Fricker, A. D., Stombaugh, J., Knight, R., Angenent, L. T., & Ley, R. E. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1000081107 · Cited by 2,540 · cited 2×
“abundance or even apparent absence of bifidobacteria [16,19].”
BackgroundFactors influencing the composition of the intestinal microbiota in early infancy
Penders, J., Thijs, C., Vink, C., Stelma, F. F., Snijders, B., Kummeling, I., van den Brandt, P. A., & Stobberingh, E. E. (2006) · PEDIATRICS · doi:10.1542/peds.2005-2824 · Cited by 2,232
Composition, variability, and temporal stability of the intestinal microbiota of the elderly
Claesson, M. J., Cusack, S., O'Sullivan, O., Greene-Diniz, R., de Weerd, H., Flannery, E., Marchesi, J. R., Falush, D., Dinan, T., Fitzgerald, G., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1000097107 · Cited by 1,754 · cited 2×
“The adult human gut microbiota is considered to be more complex than its infant equivalent, while being stable over time and similar between individuals [12,15].”
BackgroundSelf-citationUniFrac – An online tool for comparing microbial community diversity in a phylogenetic context
Lozupone, C., Hamady, M., & Knight, R. D. (2006) · BMC Bioinformatics · doi:10.1186/1471-2105-7-371 · Cited by 1,454 · cited 1×
“It has been postulated that bacterial transmission may take place from the mother to the newborn/infant through direct contact with maternal microbiota during birth and through breast milk during lactation [16,19,41].”
BackgroundGenomics of Actinobacteria : Tracing the Evolutionary History of an Ancient Phylum
Ventura, M., Canchaya, C. A., Tauch, A., Chandra, G., Fitzgerald, G. F., Chater, K. F., & van Sinderen, D. (2007) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00005-07 · Cited by 1,140 · cited 3×
“Principal Coordinate Analysis (PCoA), applied using the UniFrac program, showed that axis 1 (PCo1) explained 20.6% of the variability, while PCoA axis 2 explained 14.03% (PCo2).”
MethodInfluentialSelf-citationThe checkerboard score and species distributions
Stone, L., & Roberts, A. P. (1990) · Oecologia · doi:10.1007/bf00317345 · Cited by 1,055
Kassinen, A., Krogius-Kurikka, L., Mäkivuokko, H., Rinttilä, T., Paulin, L., Corander, J., Malinen, E., Apajalahti, J., & Palva, A. (2007) · Gastroenterology · doi:10.1053/j.gastro.2007.04.005 · Cited by 1,002 · cited 1×
“Furthermore, microbial dysbiosis has been linked to several functional gut disorders, such as inflammatory bowel disease [4,5], irritable bowel syndrome [6], stomach cancer [7], mucosa-associated lymphoid tissue lymphoma [8], obesity [9,10] and necrotizing enterocolitis [11].”
BackgroundTowards the human intestinal microbiota phylogenetic core
Tap, J., Mondot, S., Levenez, F., Pelletier, E., Caron, C., Furet, J., Ugarte, E., Muñoz‐Tamayo, R., Paslier, D. L. E., Nalin, R., et al. (2009) · Environmental Microbiology · doi:10.1111/j.1462-2920.2009.01982.x · Cited by 927 · cited 1×
“The adult human gut microbiota is considered to be more complex than its infant equivalent, while being stable over time and similar between individuals [12,15].”
BackgroundClaesson, M. J., O’Sullivan, Ó., Wang, Q., Nikkilä, J., Marchesi, J. R., Smidt, H., de Vos, W. M., Ross, R. P., & O’Toole, P. W. (2009) · PLoS ONE · doi:10.1371/journal.pone.0006669 · Cited by 900 · cited 1×
“The genus Bifidobacterium currently comprises 37 species [38,39].”
BackgroundSelf-citationSela, D. A., Chapman, J., Adeuya, A., Kim, J., Chen, F., Whitehead, T. R., Lapidus, A. L., Rokhsar, D. S., Lebrilla, C. B., German, J. B., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0809584105 · Cited by 895 · cited 1×
“infantis) are genetically adapted to utilize hostproduced glycans like mucins and human milk oligosaccharides [50–53].”
BackgroundXu, J., & Gordon, J. I. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1734063100 · Cited by 890 · cited 1×
“Studies employing murine models have highlighted the critical role played by the gut microbiota in the development of a properly functioning gastrointestinal tract [2,3].”
BackgroundMolecular Monitoring of Succession of Bacterial Communities in Human Neonates
Favier, C. F., Vaughan, E. E., de Vos, W. M., & Akkermans, A. D. L. (2002) · Applied and Environmental Microbiology · doi:10.1128/aem.68.1.219-226.2002 · Cited by 859 · cited 1×
“For a long time bifidobacteria were considered to represent the dominant component of the neonatal gut microbiota, based on both culture-based techniques and analysis using species-specific DNA probes [14,20–24].”
MethodTargeting gut microbiota in obesity: effects of prebiotics and probiotics
Delzenne, N. M., Neyrinck, A. M., Bäckhed, F., & Cani, P. D. (2011) · Nature Reviews Endocrinology · doi:10.1038/nrendo.2011.126 · Cited by 805 · cited 1×
“Furthermore, microbial dysbiosis has been linked to several functional gut disorders, such as inflammatory bowel disease [4,5], irritable bowel syndrome [6], stomach cancer [7], mucosa-associated lymphoid tissue lymphoma [8], obesity [9,10] and necrotizing enterocolitis [11].”
BackgroundDysbiosis in inflammatory bowel disease
Tamboli, C. P., Neut, C., Desreumaux, P., & Colombel, J. F. (2004) · Gut · doi:10.1136/gut.53.1.1 · Cited by 743
High-throughput diversity and functionality analysis of the gastrointestinal tract microbiota
Zoetendal, E. G., Rajilić-Stojanović, M. D., & de Vos, W. M. (2008) · Gut · doi:10.1136/gut.2007.133603 · Cited by 692 · cited 1×
“Nevertheless, even if the DNA extraction and PCR amplification protocols, as presented in this study, demonstrated good potential for bifidobacterial profiling of human gut ecosystems, these still come with some limitations, such as the potential effects on amplification yields due to increased sized amplicons [24,38].”
MethodRapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions
Reeder, J., & Knight, R. D. (2010) · Nature Methods · doi:10.1038/nmeth0910-668b · Cited by 688 · cited 1×
“The sff files were processed using QIIME [29] and 454 sequence data were subjected to ‘denoising’ using the associated Denoiser [30] as independent PUNI and BIF datasets.”
MethodImpact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys
Werner, J. J., Koren, O., Hugenholtz, P., DeSantis, T. Z., Walters, W. A., Caporaso, J. G., Angenent, L. T., Knight, R. D., & Ley, R. E. (2011) · The ISME Journal · doi:10.1038/ismej.2011.82 · Cited by 607
Salonen, A., Nikkilä, J., Jalanka, J., Immonen, O., Rajilić-Stojanović, M. D., Kekkonen, R. A., Palva, A., & de Vos, W. M. (2010) · Journal of Microbiological Methods · doi:10.1016/j.mimet.2010.02.007 · Cited by 606 · cited 2×
“Nevertheless, even if the DNA extraction and PCR amplification protocols, as presented in this study, demonstrated good potential for bifidobacterial profiling of human gut ecosystems, these still come with some limitations, such as the potential effects on amplification yields due to increased sized amplicons [24,38].”
BackgroundMethodModulation of human dendritic cell phenotype and function by probiotic bacteria
Hart, A. L., Lammers, K., Brigidi, P., Vitali, B., Rizzello, F., Gionchetti, P., Campieri, M., Kamm, M. A., Knight, S. C., & Stagg, A. J. (2004) · Gut · doi:10.1136/gut.2003.037325 · Cited by 555 · cited 1×
“High levels of bifidobacteria in the infant gut have been associated with the timely and appropriate development and maturation of the immune system [26].”
BackgroundEstablishment and development of intestinal microbiota in preterm neonates
Arboleya, S., Binetti, A. G., Salazar, N., Fernández, N., Sánchez, G. S., Hernández‐Barranco, A. M., Margollés, A., Reyes‐Gavilán, C. G. D. L., & Gueimonde, M. (2011) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2011.01261.x · Cited by 468 · cited 1×
“Composition of the faecal microbiota retrieved from the cohort (11 samples - three groups of neonatal subjects from Italy, Ireland and Spain; Table 1) was analyzed by sequencing the V6 and V8 regions of the 16 S rRNA genes [34–36].”
MethodSelf-citationImmunoproliferative Small Intestinal Disease Associated with Campylobacter jejuni
Lecuit, M., Abachin, É., Martin, A., Poyart, C., Pochart, P., Suárez, F., Bengoufa, D., Feuillard, J., Lavergne‐Slove, A., Gordon, J. I., et al. (2004) · New England Journal of Medicine · doi:10.1056/nejmoa031887 · Cited by 461
Selection of primers for optimal taxonomic classification of environmental 16S rRNA gene sequences
Soergel, D. A. W., Dey, N., Knight, R. D., & Brenner, S. E. (2012) · The ISME Journal · doi:10.1038/ismej.2011.208 · Cited by 376
Wang, M., Ahrné, S., Jeppsson, B. W., & Molin, G. (2005) · FEMS Microbiology Ecology · doi:10.1016/j.femsec.2005.03.012 · Cited by 373 · cited 1×
“) was analyzed by sequencing the V6 and V8 regions of the 16 S rRNA genes”
MethodTurroni, F., Bottacini, F., Foroni, E., Mulder, I., Kim, J.-H., Zomer, A., Sánchez, B., Bidossi, A., Ferrarini, A., Giubellini, V., et al. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1011100107 · Cited by 364
Self-citationWoese, C. R., Magrum, L. J., Gupta, R., Siegel, R. B., Stahl, D. A., Kop, J., Crawford, N. M., Brosius, R., Gutell, R. R., Hogan, J. J., et al. (1980) · Nucleic Acids Research · doi:10.1093/nar/8.10.2275 · Cited by 346
Jalanka-Tuovinen, J., Salonen, A., Nikkilä, J., Immonen, O., Kekkonen, R., Lahti, L., Palva, A., & de Vos, W. M. (2011) · PLoS ONE · doi:10.1371/journal.pone.0023035 · Cited by 340 · cited 1×
“Various publications have reported that the infant/human gut contains at best low numbers of bifidobacteria, which is in dramatic contrast with findings from both culture-dependent approaches [14,20,32] and some culture-independent approaches [46–47].”
ResultExploring the Diversity of the Bifidobacterial Population in the Human Intestinal Tract
Turroni, F., Foroni, E., Pizzetti, P., Giubellini, V., Ribbera, A., Merusi, P., Cagnasso, P., Bizzarri, B., de'Angelis, G. L., Shanahan, F., et al. (2009) · Applied and Environmental Microbiology · doi:10.1128/aem.02216-08 · Cited by 311 · cited 3×
“Recent advances in culture-independent techniques for microbial community analysis have highlighted the diversity, individual variability and complexity of the human gut microbiota [12,13,14].”
BackgroundMethodResultSelf-citationRoger, L. C., Costabile, A., Holland, D. T., Hoyles, L., & McCartney, A. L. (2010) · Microbiology · doi:10.1099/mic.0.043224-0 · Cited by 291 · cited 1×
“There are conflicting reports in the current literature concerning the composition of the gut microbiota of infants [16–19].”
ResultImmunoproliferative small intestinal disease associated with Campylobacter jejuni
Lecuit, M. (2009) · Hematology Meeting Reports · doi:10.4081/hmr.v1i5.265 · Cited by 264
Comparative Metagenomics and Population Dynamics of the Gut Microbiota in Mother and Infant
Vaishampayan, P., Kuehl, J. V., Froula, J. L., Morgan, J. L., Ochman, H., & Francino, M. P. (2010) · Genome Biology and Evolution · doi:10.1093/gbe/evp057 · Cited by 248 · cited 1×
“These findings reinforce the hypothesis of a transmission of elements of the mother’s bifidobacterial population to the infant through faecal contamination and/or milk feeding [44–45].”
BackgroundThe intestinal bacterial colonisation in preterm infants: A review of the literature
Westerbeek, E. A. M., van den Berg, A., Lafeber, H. N., Knol, J., Fetter, W. P. F., & van Elburg, R. M. (2006) · Clinical Nutrition · doi:10.1016/j.clnu.2006.03.002 · Cited by 237 · cited 1×
“In order to evaluate OTU coexistence we evaluated both the C-score, indicating the trend of one species to exclude another from the same ecological niche [42], as well as checkerboard measures, which represent the number of species pairs that never co-occur [43].”
Methodde la Cochetière, M.-F., Piloquet, H., Robert, C. D., Darmaun, D., Galmiche, J., & Rozé, J. (2004) · Pediatric Research · doi:10.1203/01.pdr.0000134251.45878.d5 · Cited by 224
Apajalahti, J., Särkilahti, L. K., Mäki, B. R. E., Heikkinen, J. P., Nurminen, P. H., & Holben, W. E. (1998) · Applied and Environmental Microbiology · doi:10.1128/aem.64.10.4084-4088.1998 · Cited by 209
Genomics and ecological overview of the genus Bifidobacterium
Turroni, F., van Sinderen, D., & Ventura, M. (2010) · International Journal of Food Microbiology · doi:10.1016/j.ijfoodmicro.2010.12.010 · Cited by 201 · cited 1×
“Composition of the faecal microbiota retrieved from the cohort (11 samples - three groups of neonatal subjects from Italy, Ireland and Spain; Table 1) was analyzed by sequencing the V6 and V8 regions of the 16 S rRNA genes [34–36].”
MethodSelf-citationThe intestinal microbiota in health and disease
Young, V. B. (2011) · Current Opinion in Gastroenterology · doi:10.1097/mog.0b013e32834d61e9 · Cited by 164 · cited 1×
“The gastrointestinal microbiota plays a crucial role in health and disease of the host through its impact on nutrition, pathogenesis and immunology [1].”
BackgroundComplete Genome Sequence of Bifidobacterium longum subsp. longum KACC 91563
Ham, J.-S., Lee, T., Byun, M.-J., Lee, K., Kim, M., Han, G.-S., Jeong, S.-G., Oh, M., Kim, D., & Kim, H. (2011) · Journal of Bacteriology · doi:10.1128/jb.05620-11 · Cited by 143
Microbiomic analysis of the bifidobacterial population in the human distal gut
Turroni, F., Marchesi, J. R., Foroni, E., Gueimonde, M., Shanahan, F., Margolles, A., van Sinderen, D., & Ventura, M. (2009) · The ISME Journal · doi:10.1038/ismej.2009.19 · Cited by 137 · cited 1×
“However, it is important to highlight that it will be near to impossible to design a PCR primer set that is able to generate an equally efficient amplification yield of 16 S rRNA gene sequences across all components of the human gut microbiota [48].”
BackgroundSelf-citationKlaassens, E. S., Boesten, R. J., Haarman, M., Knol, J., Schuren, F. H. J., Vaughan, E. E., & de Vos, W. M. (2009) · Applied and Environmental Microbiology · doi:10.1128/aem.02492-08 · Cited by 107 · cited 1×
“For a long time bifidobacteria were considered to represent the dominant component of the neonatal gut microbiota, based on both culture-based techniques and analysis using species-specific DNA probes [14,20–24].”
MethodTurroni, F., Milani, C., van Sinderen, D., & Ventura, M. (2011) · Gut Microbes · doi:10.4161/gmic.2.3.16105 · Cited by 77 · cited 1×
“infantis) are genetically adapted to utilize hostproduced glycans like mucins and human milk oligosaccharides [50–53].”
BackgroundSelf-citationA molecular strategy for the study of natural bacterial communities by PCR-based techniques
Cello, F. D., & Fani, R. (1996) · Florence Research (University of Florence) · Cited by 72
The ISME Journal: Multidisciplinary Journal of Microbial Ecology
Kowalchuk, G. A., Heidelberg, J. F., & Bailey, M. J. (2007) · The ISME Journal · doi:10.1038/ismej.2007.13 · Cited by 64
Turroni, F., Foroni, E., Serafini, F., Viappiani, A., Montanini, B., Bottacini, F., Ferrarini, A., Bacchini, P. L., Rota, C., Delledonne, M., et al. (2011) · Applied and Environmental Microbiology · doi:10.1128/aem.05336-11 · Cited by 50 · cited 1×
“For a long time bifidobacteria were considered to represent the dominant component of the neonatal gut microbiota, based on both culture-based techniques and analysis using species-specific DNA probes [14,20–24].”
MethodSelf-citationFecal flora measurements of breastfed infants using an integrated transport and culturing system
Fanaro, S., Vigi, V., Chierici, R., & Boehm, G. (2003) · Acta Paediatrica · doi:10.1111/j.1651-2227.2003.tb02521.x · Cited by 36 · cited 2×
“bottle fed, are considered to be key factors that provide differential colonization opportunities and thus composition of the neonatal gut microbiota [20,25].”
BackgroundResultTakahashi, H., Mikami, K., Nishino, R., Matsuoka, T., Kimura, M., & Koga, Y. (2010) · Journal of Pediatric Gastroenterology and Nutrition · doi:10.1097/mpg.0b013e3181f0e032 · Cited by 30 · cited 1×
“Various publications have reported that the infant/human gut contains at best low numbers of bifidobacteria, which is in dramatic contrast with findings from both culture-dependent approaches [14,20,32] and some culture-independent approaches [46–47].”
Result
Flagged first, then by citations
Research works printed but not linked: 1
- JM Diamond, 1975, Assembly of species community., Ecology and Evolution of Communities, eds Cody ML, Diamond JM (Harvard Univ Press, Cambridge, MA),, 342–444
Cited by
Sorted by citations
Milani, C., Duranti, S., Bottacini, F., Casey, E., Turroni, F., Mahony, J., Belzer, C., Delgado Palacio, S., Arboleya Montes, S., Mancabelli, L., et al. (2017) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00036-17 · Cited by 1,950
“Bifidobacterium has been considered to represent the dominant bacterial genus in the breastfed infant gut microbiota (41, 269), but recent studies have also shown a high occurrence of enterobacteria in such an infant population.”
BackgroundResultSelf-citationRivière, A., Selak, M., Lantin, D., Leroy, F., & Vuyst, L. D. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.00979 · Cited by 1,810
“In general, B. bifidum and B. longum are the dominant species in infants, whereas B. adolescentis and B. longum dominate the adult gut microbiota (Turroni et al., 2012).”
BackgroundBacteria as vitamin suppliers to their host: A gut microbiota perspective
LeBlanc, J. G., Milani, C., de Giori, G. S., Sesma, F., van Sinderen, D., & Ventura, M. (2013) · Current Opinion in Biotechnology · doi:10.1016/j.copbio.2012.08.005 · Cited by 1,613
Self-citationMicrobiota-mediated colonization resistance against intestinal pathogens
Buffie, C. G., & Pamer, E. G. (2013) · Nature reviews. Immunology · doi:10.1038/nri3535 · Cited by 1,564
Probiotics, gut microbiota, and their influence on host health and disease
Sánchez, B., Delgado, S., Blanco‐Míguez, A., Lourenço, A., Gueimonde, M., & Margolles, A. (2017) · Molecular Nutrition & Food Research · doi:10.1002/mnfr.201600240 · Cited by 1,104
“Therefore, since bifidobacteria populations are abundant in breast-fed infants, compared with those fed with infant formula, it is generally believed that the presence of bifidobacteria in the microbiota of infants is an indicator of good health [93, 94].”
BackgroundSelf-citation
Metadata
- Authors
- Turroni, F., Peano, C., Pass, D. A., Foroni, E., Severgnini, M., Claesson, M. J., Kerr, C., Hourihane, J., Murray, D., Fuligni, F., Gueimonde, M., Margolles, A., De Bellis, G., O’Toole, P. W., van Sinderen, D., Marchesi, J. R., & Ventura, M.
- Affiliations
- University of Parma (IT)
- National Research Council (IT)
- Cardiff University (GB)
- University College Cork (IE)
- Consejo Superior de Investigaciones Científicas (ES)
- Corresponding author
- Ventura, Marco
- ORCID
- Venue
- PLoS ONE
- Publisher
- Public Library of Science (PLoS)
- Published
- 2012-05-11
- Volume
- 7
- Issue
- 5
- Pages
- e36957
- ISSN
- 1932-6203 (ISSN-L)
- PMC
- PMC3350489
- OpenAlex
- W2048550695
- Cited by
- 647
- References
- 54
- Citations by year
- 2026: 17 · 2025: 32 · 2024: 45 · 2023: 36 · 2022: 49 · 2021: 57 · 2020: 71 · 2019: 29 · 2018: 46 · 2017: 56 · 2016: 52 · 2015: 50 · 2014: 48 · 2013: 41 · 2012: 17
- FWCI
- 20.04
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- PLoS ONE (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- ORCA Online Research @Cardiff (Cardiff University) (acceptedVersion)
- DIGITAL.CSIC (Spanish National Research Council (CSIC)) (submittedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- Figshare (submittedVersion, cc-by)
- Funders
- Royal Society
- Irish Research Council for Science, Engineering and Technology
- Science Foundation Ireland (02/CE/B124, 07/CE/B1368)
- Ministero dell’Istruzione, dell’Università e della Ricerca
- Natural Environment Research Council (NBAF010005)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Nursing › Nutrition and Dietetics › Infant Nutrition and Health
- Life Sciences › Agricultural and Biological Sciences › Food Science › Probiotics and Fermented Foods
- Keywords
- Bifidobacterium, infant gut microbiota, bacterial diversity, 16S rRNA gene, fecal microbiota, breastfeeding, bottle feeding, mode of delivery, vaginal delivery, cesarean section, maternal microbiota, species co-occurrence, gut commensal bacteria
- MeSH terms
- Base Sequence, Bifidobacterium, Feces, Female, Genes, Bacterial, Humans, Infant, Phylogeny, Pregnancy, RNA, Bacterial, RNA, Ribosomal, 16S, Genetic Variation, DNA Primers, Gastrointestinal Tract, Metagenome
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review