Student or educator? Sign up with your school email and get 6 months of Pro free.
Cited by 3,533

The DOI matches its Crossref record; 7 of the 7 references it cites were found in a registry or an index.

The Role of Chromatin during Transcription

Open access
Li, Bing, Carey, Michael, Workman, Jerry L.·2007·Cell

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1016/j.cell.2007.01.015

Cites

7 of 7 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Show all 7 references

Research works printed but not linked: 126

  1. Adams, 1995, Binding of disparate transcriptional activators to nucleosomal DNA is inherently cooperative, Mol. Cell. Biol., 15, 1405, 10.1128/MCB.15.3.1405 · DOI · Paper page
  2. Adelman, 2006, Drosophila Paf1 modulates chromatin structure at actively transcribed genes, Mol. Cell. Biol., 26, 250, 10.1128/MCB.26.1.250-260.2006 · DOI
  3. Belotserkovskaya, 2003, FACT facilitates transcription-dependent nucleosome alteration, Science, 301, 1090, 10.1126/science.1085703 · DOI · Paper page
  4. Bernstein, 2004, Global nucleosome occupancy in yeast, Genome Biol., 5, R62, 10.1186/gb-2004-5-9-r62 · DOI · Paper page
  5. Bhaumik, 2001, SAGA is an essential in vivo target of the yeast acidic activator Gal4p, Genes Dev., 15, 1935, 10.1101/gad.911401 · DOI · Paper page
  6. Boeger, 2004, Removal of promoter nucleosomes by disassembly rather than sliding in vivo, Mol. Cell, 14, 667, 10.1016/j.molcel.2004.05.013 · DOI · Paper page
  7. Bondarenko, 2006, Nucleosomes can form a polar barrier to transcript elongation by RNA polymerase II, Mol. Cell, 24, 469, 10.1016/j.molcel.2006.09.009 · DOI · Paper page
  8. Brown, 2000, The many HATs of transcription coactivators, Trends Biochem. Sci., 25, 15, 10.1016/S0968-0004(99)01516-9 · DOI · Paper page
  9. Brown, 2001, Recruitment of HAT complexes by direct activator interactions with the ATM-related Tra1 subunit, Science, 292, 2333, 10.1126/science.1060214 · DOI · Paper page
  10. Brownell, 1996, Tetrahymena histone acetyltransferase A: a homolog to yeast Gcn5p linking histone acetylation to gene activation, Cell, 84, 843, 10.1016/S0092-8674(00)81063-6 · DOI · Paper page
  11. Bruno, 2003, Histone H2A/H2B dimer exchange by ATP-dependent chromatin remodeling activities, Mol. Cell, 12, 1599, 10.1016/S1097-2765(03)00499-4 · DOI · Paper page
  12. Bucceri, 2006, Rapid accessibility of nucleosomal DNA in yeast on a second time scale, EMBO J., 25, 3123, 10.1038/sj.emboj.7601196 · DOI
  13. Buratowski, 2003, The CTD code, Nat. Struct. Biol., 10, 679, 10.1038/nsb0903-679 · DOI · Paper page
  14. Carey, 2006, RSC exploits histone acetylation to abrogate the nucleosomal block to RNA polymerase II elongation, Mol. Cell, 24, 481, 10.1016/j.molcel.2006.09.012 · DOI · Paper page
  15. Carrozza, 2005, Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription, Cell, 123, 581, 10.1016/j.cell.2005.10.023 · DOI · Paper page
  16. Chandy, 2006, SWI/SNF displaces SAGA-acetylated nucleosomes, Eukaryot. Cell, 5, 1738, 10.1128/EC.00165-06 · DOI
  17. Chen, 1994, A histone-binding protein, nucleoplasmin, stimulates transcription factor binding to nucleosomes and factor-induced nucleosome disassembly, EMBO J., 13, 380, 10.1002/j.1460-2075.1994.tb06272.x · doi:10.1002/j.1460-2075.1994.tb06272.x
  18. Clark, 1992, A nucleosome core is transferred out of the path of a transcribing polymerase, Cell, 71, 11, 10.1016/0092-8674(92)90262-B · DOI
  19. Clayton, 2006, Enhanced histone acetylation and transcription: a dynamic perspective, Mol. Cell, 23, 289, 10.1016/j.molcel.2006.06.017 · DOI · Paper page
  20. Cosma, 1999, Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter, Cell, 97, 299, 10.1016/S0092-8674(00)80740-0 · DOI · Paper page
  21. Cote, 1994, Stimulation of GAL4 derivative binding to nucleosomal DNA by the yeast SWI/SNF complex, Science, 265, 53, 10.1126/science.8016655 · DOI · Paper page
  22. Deckert, 2001, Histone acetylation at promoters is differentially affected by specific activators and repressors, Mol. Cell. Biol., 21, 2726, 10.1128/MCB.21.8.2726-2735.2001 · DOI
  23. Dehe, 2005, Histone H3 lysine 4 mono-methylation does not require ubiquitination of histone H2B, J. Mol. Biol., 353, 477, 10.1016/j.jmb.2005.08.059 · DOI
  24. Dion, 2005, Genomic characterization reveals a simple histone H4 acetylation code, Proc. Natl. Acad. Sci. USA, 102, 5501, 10.1073/pnas.0500136102 · DOI · Paper page
  25. Doyen, 2006, Mechanism of polymerase II transcription repression by the histone variant macroH2A, Mol. Cell. Biol., 26, 1156, 10.1128/MCB.26.3.1156-1164.2006 · DOI
  26. Doyen, 2006, Dissection of the unusual structural and functional properties of the variant H2A.Bbd nucleosome, EMBO J., 18, 4234, 10.1038/sj.emboj.7601310 · DOI
  27. Flaus, 2004, Mechanisms for ATP-dependent chromatin remodelling: farewell to the tuna-can octamer?, Curr. Opin. Genet. Dev., 14, 165, 10.1016/j.gde.2004.01.007 · DOI
  28. Green, 2005, Eukaryotic transcription activation: right on target, Mol. Cell, 18, 399, 10.1016/j.molcel.2005.04.017 · DOI
  29. Guccione, 2006, Myc-binding-site recognition in the human genome is determined by chromatin context, Nat. Cell Biol., 8, 764, 10.1038/ncb1434 · DOI · Paper page
  30. Guermah, 2006, Synergistic functions of SII and p300 in productive activator-dependent transcription of chromatin templates, Cell, 125, 275, 10.1016/j.cell.2006.01.055 · DOI
  31. Guillemette, 2005, Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning, PLoS Biol., 3, e384, 10.1371/journal.pbio.0030384 · DOI · Paper page
  32. Hahn, 2004, Structure and mechanism of the RNA polymerase II transcription machinery, Nat. Struct. Mol. Biol., 11, 394, 10.1038/nsmb763 · DOI · Paper page
  33. Han, 1988, Nucleosome loss activates yeast downstream promoters in vivo, Cell, 55, 1137, 10.1016/0092-8674(88)90258-9 · DOI · Paper page
  34. Hassan, 2001, Promoter targeting of chromatin-modifying complexes, Front. Biosci., 6, D1054, 10.2741/Hassan · DOI
  35. Hassan, 2001, Histone acetyltransferase complexes stabilize swi/snf binding to promoter nucleosomes, Cell, 104, 817, 10.1016/S0092-8674(01)00279-3 · DOI · Paper page
  36. Hassan, 2006, The Swi2/Snf2 bromodomain is required for the displacement of SAGA and the octamer transfer of SAGA-acetylated nucleosomes, J. Biol. Chem., 281, 18126, 10.1074/jbc.M602851200 · DOI
  37. Henikoff, 2005, Assembly of variant histones into chromatin, Annu. Rev. Cell Dev. Biol., 21, 133, 10.1146/annurev.cellbio.21.012704.133518 · DOI · Paper page
  38. Imbalzano, 1994, Facilitated binding of TATA-binding protein to nucleosomal DNA, Nature, 370, 481, 10.1038/370481a0 · DOI · Paper page
  39. Ito, 2000, p300-mediated acetylation facilitates the transfer of histone H2A–H2B dimers from nucleosomes to a histone chaperone, Genes Dev., 14, 1899, 10.1101/gad.14.15.1899 · DOI · Paper page
  40. Jason, 2002, Histone ubiquitination: a tagging tail unfolds?, Bioessays, 24, 166, 10.1002/bies.10038 · DOI
  41. Jenuwein, 2001, Translating the histone code, Science, 293, 1074, 10.1126/science.1063127 · DOI · Paper page
  42. Joshi, 2005, Eaf3 chromodomain interaction with methylated H3–K36 links histone deacetylation to Pol II elongation, Mol. Cell, 20, 971, 10.1016/j.molcel.2005.11.021 · DOI · Paper page
  43. Kamakaka, 2005, Histone variants: deviants?, Genes Dev., 19, 295, 10.1101/gad.1272805 · DOI · Paper page
  44. Kao, 2004, Rad6 plays a role in transcriptional activation through ubiquitylation of histone H2B, Genes Dev., 18, 184, 10.1101/gad.1149604 · DOI
  45. Kaplan, 2003, Transcription elongation factors repress transcription initiation from cryptic sites, Science, 301, 1096, 10.1126/science.1087374 · DOI · Paper page
  46. Kayne, 1988, Extremely conserved histone H4 N terminus is dispensable for growth but essential for repressing the silent mating loci in yeast, Cell, 55, 27, 10.1016/0092-8674(88)90006-2 · DOI · Paper page
  47. Keogh, 2005, Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex, Cell, 123, 593, 10.1016/j.cell.2005.10.025 · DOI · Paper page
  48. Kireeva, 2002, Nucleosome remodeling induced by RNA polymerase II: loss of the H2A/H2B dimer during transcription, Mol. Cell, 9, 541, 10.1016/S1097-2765(02)00472-0 · DOI · Paper page
  49. Kireeva, 2005, Nature of the nucleosomal barrier to RNA polymerase II, Mol. Cell, 18, 97, 10.1016/j.molcel.2005.02.027 · DOI · Paper page
  50. Knezetic, 1986, The presence of nucleosomes on a DNA template prevents initiation by RNA polymerase II in vitro, Cell, 45, 95, 10.1016/0092-8674(86)90541-6 · DOI · Paper page
  51. Kornberg, 1999, Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome, Cell, 98, 285, 10.1016/S0092-8674(00)81958-3 · DOI · Paper page
  52. Kornberg, 1974, Chromatin structure; oligomers of the histones, Science, 184, 865, 10.1126/science.184.4139.865 · DOI · Paper page
  53. Krogan, 2003, The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation, Mol. Cell, 11, 721, 10.1016/S1097-2765(03)00091-1 · DOI · Paper page
  54. Krogan, 2003, Methylation of histone H3 by Set2 in Saccharomyces cerevisiae is linked to transcriptional elongation by RNA polymerase II, Mol. Cell. Biol., 23, 4207, 10.1128/MCB.23.12.4207-4218.2003 · DOI · Paper page
  55. Kulish, 2001, TFIIS enhances transcriptional elongation through an artificial arrest site in vivo, Mol. Cell. Biol., 21, 4162, 10.1128/MCB.21.13.4162-4168.2001 · DOI
  56. Kurdistani, 2004, Mapping global histone acetylation patterns to gene expression, Cell, 117, 721, 10.1016/j.cell.2004.05.023 · DOI · Paper page
  57. Kwon, 1994, Nucleosome disruption and enhancement of activator binding by a human SW1/SNF complex, Nature, 370, 477, 10.1038/370477a0 · DOI · Paper page
  58. Landry, 2003, Set2-catalyzed methylation of histone H3 represses basal expression of GAL4 in Saccharomyces cerevisiae, Mol. Cell. Biol., 23, 5972, 10.1128/MCB.23.17.5972-5978.2003 · DOI
  59. Li, 2003, The Set2 histone methyltransferase functions through the phosphorylated carboxyl-terminal domain of RNA polymerase II, J. Biol. Chem., 278, 8897, 10.1074/jbc.M212134200 · DOI · Paper page
  60. Li, 2005, Preferential occupancy of histone variant H2AZ at inactive promoters influences local histone modifications and chromatin remodeling, Proc. Natl. Acad. Sci. USA, 102, 18385, 10.1073/pnas.0507975102 · DOI · Paper page
  61. Li, 2002, Association of the histone methyltransferase Set2 with RNA polymerase II plays a role in transcription elongation, J. Biol. Chem., 277, 49383, 10.1074/jbc.M209294200 · DOI · Paper page
  62. Lomvardas, 2001, Nucleosome sliding via TBP DNA binding in vivo, Cell, 106, 685, 10.1016/S0092-8674(01)00490-1 · DOI · Paper page
  63. Lorch, 1987, Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones, Cell, 49, 203, 10.1016/0092-8674(87)90561-7 · DOI · Paper page
  64. Lorch, 2001, RSC unravels the nucleosome, Mol. Cell, 7, 89, 10.1016/S1097-2765(01)00157-5 · DOI
  65. Lorch, 2006, Chromatin remodeling by nucleosome disassembly in vitro, Proc. Natl. Acad. Sci. USA, 103, 3090, 10.1073/pnas.0511050103 · DOI · Paper page
  66. Luger, 1997, Crystal structure of the nucleosome core particle at 2.8 A resolution, Nature, 389, 251, 10.1038/38444 · DOI · Paper page
  67. Mason, 2003, The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo, Mol. Cell. Biol., 23, 8323, 10.1128/MCB.23.22.8323-8333.2003 · DOI · Paper page
  68. Mason, 2005, Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo, Mol. Cell, 17, 831, 10.1016/j.molcel.2005.02.017 · DOI · Paper page
  69. McKittrick, 2004, Histone H3.3 is enriched in covalent modifications associated with active chromatin, Proc. Natl. Acad. Sci. USA, 101, 1525, 10.1073/pnas.0308092100 · DOI · Paper page
  70. Millar, 2006, Acetylation of H2AZ Lys 14 is associated with genome-wide gene activity in yeast, Genes Dev., 20, 711, 10.1101/gad.1395506 · DOI · Paper page
  71. Mizuguchi, 2004, ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex, Science, 303, 343, 10.1126/science.1090701 · DOI · Paper page
  72. Ng, 2003, The Rtf1 component of the Paf1 transcriptional elongation complex is required for ubiquitination of histone H2B, J. Biol. Chem., 278, 33625, 10.1074/jbc.C300270200 · DOI · Paper page
  73. Ng, 2003, Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity, Mol. Cell, 11, 709, 10.1016/S1097-2765(03)00092-3 · DOI · Paper page
  74. Orphanides, 1999, The chromatin-specific transcription elongation factor FACT comprises human SPT16 and SSRP1 proteins, Nature, 400, 284, 10.1038/22350 · DOI · Paper page
  75. Owen-Hughes, 1996, Remodeling the chromatin structure of a nucleosome array by transcription factor-targeted trans-displacement of histones, EMBO J., 15, 4702, 10.1002/j.1460-2075.1996.tb00847.x · DOI
  76. Owen-Hughes, 1996, Persistent site-specific remodeling of a nucleosome array by transient action of the SWI/SNF complex, Science, 273, 513, 10.1126/science.273.5274.513 · DOI · Paper page
  77. Park, 2005, Nucleosome assembly protein 1 exchanges histone H2A–H2B dimers and assists nucleosome sliding, J. Biol. Chem., 280, 1817, 10.1074/jbc.M411347200 · DOI · Paper page
  78. Pavri, 2006, Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II, Cell, 125, 703, 10.1016/j.cell.2006.04.029 · DOI · Paper page
  79. Phelan, 2000, Octamer transfer and creation of stably remodeled nucleosomes by human SWI-SNF and its isolated ATPases, Mol. Cell. Biol., 20, 6380, 10.1128/MCB.20.17.6380-6389.2000 · DOI
  80. Pokholok, 2005, Genome-wide map of nucleosome acetylation and methylation in yeast, Cell, 122, 517, 10.1016/j.cell.2005.06.026 · DOI · Paper page
  81. Pray-Grant, 2005, Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation, Nature, 433, 434, 10.1038/nature03242 · DOI · Paper page
  82. Qiu, 2006, The Spt4p subunit of yeast DSIF stimulates association of the Paf1 complex with elongating RNA polymerase II, Mol. Cell. Biol., 26, 3135, 10.1128/MCB.26.8.3135-3148.2006 · DOI
  83. Raisner, 2005, Histone variant H2A.Z marks the 5′ ends of both active and inactive genes in euchromatin, Cell, 123, 233, 10.1016/j.cell.2005.10.002 · DOI · Paper page
  84. Rao, 2005, Dimethylation of histone H3 at lysine 36 demarcates regulatory and nonregulatory chromatin genome-wide, Mol. Cell. Biol., 25, 9447, 10.1128/MCB.25.21.9447-9459.2005 · DOI · Paper page
  85. Reinberg, 2006, de FACTo nucleosome dynamics, J. Biol. Chem., 281, 23297, 10.1074/jbc.R600007200 · DOI
  86. Reinke, 2003, Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter, Mol. Cell, 11, 1599, 10.1016/S1097-2765(03)00186-2 · DOI · Paper page
  87. Richmond, 2006, Genomics: predictable packaging, Nature, 442, 750, 10.1038/442750a · doi:10.1038/442750a
  88. Robert, 2004, Global position and recruitment of HATs and HDACs in the yeast genome, Mol. Cell, 16, 199, 10.1016/j.molcel.2004.09.021 · DOI
  89. Rosonina, 2005, From transcription to mRNA: PAF provides a new path, Mol. Cell, 20, 167, 10.1016/j.molcel.2005.10.004 · DOI
  90. Saha, 2006, Chromatin remodelling: the industrial revolution of DNA around histones, Nat. Rev. Mol. Cell Biol., 7, 437, 10.1038/nrm1945 · DOI · Paper page
  91. Schwabish, 2004, Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II, Mol. Cell. Biol., 24, 10111, 10.1128/MCB.24.23.10111-10117.2004 · DOI · Paper page
  92. Schwabish, 2006, Asf1 mediates histone eviction and deposition during elongation by RNA polymerase II, Mol. Cell, 22, 415, 10.1016/j.molcel.2006.03.014 · DOI · Paper page
  93. Schwartz, 2005, Transcriptional activation triggers deposition and removal of the histone variant H3.3, Genes Dev., 19, 804, 10.1101/gad.1259805 · DOI · Paper page
  94. Seet, 2006, Reading protein modifications with interaction domains, Nat. Rev. Mol. Cell Biol., 7, 473, 10.1038/nrm1960 · DOI · Paper page
  95. Sekinger, 2005, Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast, Mol. Cell, 18, 735, 10.1016/j.molcel.2005.05.003 · DOI · Paper page
  96. Shahbazian, 2005, Histone H2B ubiquitylation controls processive methylation but not monomethylation by Dot1 and Set1, Mol. Cell, 19, 271, 10.1016/j.molcel.2005.06.010 · DOI
  97. Sharma, 2003, SWI/SNF-dependent chromatin remodeling of RNR3 requires TAF(II)s and the general transcription machinery, Genes Dev., 17, 502, 10.1101/gad.1039503 · DOI
  98. Shilatifard, 2006, Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression, Annu. Rev. Biochem., 75, 243, 10.1146/annurev.biochem.75.103004.142422 · DOI · Paper page
  99. Shogren-Knaak, 2006, Histone H4–K16 acetylation controls chromatin structure and protein interactions, Science, 311, 844, 10.1126/science.1124000 · DOI · Paper page
  100. Simic, 2003, Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes, EMBO J., 22, 1846, 10.1093/emboj/cdg179 · DOI · Paper page
  101. Smith, 2005, ATP-dependent chromatin remodeling, Curr. Top. Dev. Biol., 65, 115, 10.1016/S0070-2153(04)65004-6 · DOI · Paper page
  102. Squazzo, 2002, The Paf1 complex physically and functionally associates with transcription elongation factors in vivo, EMBO J., 21, 1764, 10.1093/emboj/21.7.1764 · DOI · Paper page
  103. Strahl, 2000, The language of covalent histone modifications, Nature, 403, 41, 10.1038/47412 · DOI · Paper page
  104. Strahl, 2002, Set2 is a nucleosomal histone H3-selective methyltransferase that mediates transcriptional repression, Mol. Cell. Biol., 22, 1298, 10.1128/MCB.22.5.1298-1306.2002 · DOI · Paper page
  105. Studitsky, 1994, A histone octamer can step around a transcribing polymerase without leaving the template, Cell, 76, 371, 10.1016/0092-8674(94)90343-3 · DOI · Paper page
  106. Studitsky, 1995, Overcoming a nucleosomal barrier to transcription, Cell, 83, 19, 10.1016/0092-8674(95)90230-9 · DOI · Paper page
  107. Studitsky, 1997, Mechanism of transcription through the nucleosome by eukaryotic RNA polymerase, Science, 278, 1960, 10.1126/science.278.5345.1960 · DOI · Paper page
  108. Sun, 2002, Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast, Nature, 418, 104, 10.1038/nature00883 · DOI · Paper page
  109. Swaminathan, 2005, Human histone chaperone nucleophosmin enhances acetylation-dependent chromatin transcription, Mol. Cell. Biol., 25, 7534, 10.1128/MCB.25.17.7534-7545.2005 · DOI
  110. Taylor, 1991, Facilitated binding of GAL4 and heat shock factor to nucleosomal templates: differential function of DNA-binding domains, Genes Dev., 5, 1285, 10.1101/gad.5.7.1285 · DOI · Paper page
  111. Thomas, 2006, The general transcription machinery and general cofactors, Crit. Rev. Biochem. Mol. Biol., 41, 105, 10.1080/10409230600648736 · DOI · Paper page
  112. Turner, 2000, Histone acetylation and an epigenetic code, Bioessays, 22, 836, 10.1002/1521-1878(200009)22:9<836::AID-BIES9>3.0.CO;2-X · DOI · Paper page
  113. Utley, 1997, SWI/SNF stimulates the formation of disparate activator-nucleosome complexes but is partially redundant with cooperative binding, J. Biol. Chem., 272, 12642, 10.1074/jbc.272.19.12642 · DOI
  114. Walter, 1995, Stimulation of transcription factor binding and histone displacement by nucleosome assembly protein 1 and nucleoplasmin requires disruption of the histone octamer, Mol. Cell. Biol., 15, 6178, 10.1128/MCB.15.11.6178 · DOI
  115. Wood, 2003, The Paf1 complex is essential for histone monoubiquitination by the Rad6-Bre1 complex, which signals for histone methylation by COMPASS and Dot1p, J. Biol. Chem., 278, 34739, 10.1074/jbc.C300269200 · DOI · Paper page
  116. Workman, 2006, Nucleosome displacement in transcription, Genes Dev., 20, 2009, 10.1101/gad.1435706 · DOI · Paper page
  117. Workman, 1992, Nucleosome core displacement in vitro via a metastable transcription factor-nucleosome complex, Science, 258, 1780, 10.1126/science.1465613 · DOI
  118. Workman, 1998, Alteration of nucleosome structure as a mechanism of transcriptional regulation, Annu. Rev. Biochem., 67, 545, 10.1146/annurev.biochem.67.1.545 · DOI · Paper page
  119. Wysocka, 2005, WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development, Cell, 121, 859, 10.1016/j.cell.2005.03.036 · DOI · Paper page
  120. Xiao, 2003, Phosphorylation of RNA polymerase II CTD regulates H3 methylation in yeast, Genes Dev., 17, 654, 10.1101/gad.1055503 · DOI · Paper page
  121. Xiao, 2005, Histone H2B ubiquitylation is associated with elongating RNA polymerase II, Mol. Cell. Biol., 25, 637, 10.1128/MCB.25.2.637-651.2005 · DOI · Paper page
  122. Yuan, 2005, Genome-scale identification of nucleosome positions in S. cerevisiae, Science, 309, 626, 10.1126/science.1112178 · DOI · Paper page
  123. Zanton, 2006, Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock, Genes Dev., 20, 2250, 10.1101/gad.1437506 · DOI
  124. Zhang, 2005, Genome-wide dynamics of Htz1, a histone H2A variant that poises repressed/basal promoters for activation through histone loss, Cell, 123, 219, 10.1016/j.cell.2005.08.036 · DOI · Paper page
  125. Zhang, 2006, It takes a PHD to interpret histone methylation, Nat. Struct. Mol. Biol., 13, 572, 10.1038/nsmb0706-572 · DOI
  126. Zhao, 2005, Domain-wide displacement of histones by activated heat shock factor occurs independently of Swi/Snf and is not correlated with RNA polymerase II density, Mol. Cell. Biol., 25, 8985, 10.1128/MCB.25.20.8985-8999.2005 · DOI

Cited by

See all 3,533

Metadata

Authors
Li, B., Carey, M., & Workman, J. L.
Venue
Cell
Publisher
Elsevier BV
Published
2007-02
Volume
128
Issue
4
Pages
707-719
ISSN
0092-8674 (ISSN-L)
OpenAlex
W2133452708
Cited by
3,533
References
7
FWCI
104.64
Type
journal article
Language
en
Open access
bronze
Licence

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review

How to cite

Cite CoChat for the checks on this page, and the paper for its own findings.

This page
CoChat. (2026). Citation check: The Role of Chromatin during Transcription. https://app.cochat.ai/papers/10.1016/j.cell.2007.01.015
The paper
Li, B., Carey, M., & Workman, J. L. (2007). The Role of Chromatin during Transcription. Cell. https://doi.org/10.1016/j.cell.2007.01.015

Data sources

Bibliographic data: Semantic Scholar, OpenAlex, Crossref.

Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.