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Dietary-fat-induced taurocholic acid promotes pathobiont expansion and colitis in Il10-/- mice
Open accessAbstract
The composite human microbiome of Western populations has probably changed over the past century, brought on by new environmental triggers that often have a negative impact on human health. Here we show that consumption of a diet high in saturated (milk-derived) fat, but not polyunsaturated (safflower oil) fat, changes the conditions for microbial assemblage and promotes the expansion of a low-abundance, sulphite-reducing pathobiont, Bilophila wadsworthia. This was associated with a pro-inflammatory T helper type 1 (T(H)1) immune response and increased incidence of colitis in genetically susceptible Il10(−/−), but not wild-type mice. These effects are mediated by milk-derived-fat-promoted taurine conjugation of hepatic bile acids, which increases the availability of organic sulphur used by sulphite-reducing microorganisms like B. wadsworthia. When mice were fed a low-fat diet supplemented with taurocholic acid, but not with glycocholic acid, for example, a bloom of B. wadsworthia and development of colitis were observed in Il10(−/−) mice. Together these data show that dietary fats, by promoting changes in host bile acid composition, can markedly alter conditions for gut microbial assemblage, resulting in dysbiosis that can perturb immune homeostasis. The data provide a plausible mechanistic basis by which Western-type diets high in certain saturated fats might increase the prevalence of complex immune-mediated diseases like inflammatory bowel disease in genetically susceptible hosts.
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In the citing paper
“Bacteria with BSH activity have benefited from enhanced tolerance against bile and better survival in the gut environment (Begley et al., 2006;Devkota et al., 2012).”
From The Microbiota-Gut-Brain Axis (2019) · cites this paper as Devkota et al., 2012
Experimental — accuracy not yet measuredIn the citing paper
“In Il10−/− mice and mice without disruption of this gene, a diet high in saturated (milk-derived) fat (MF) promoted expansion of the immunogenic sulfite-reducing pathobiont Bilophila wadsworthia, a member of the Deltaproteobacteria.174”
From Influence of the Gut Microbiome, Diet, and Environment on Risk of Colorectal Cancer (2020) · cites this paper as [174]
In the citing paper
“Bilophila wadsworthia, a sulphite-reducing bacteria, has been associated with an increased incidence of colitis [52], and emerges under pathological conditions such as appendicitis and other intestinal inflammatory disorders [52].”
From Intestinal Microbiota Is Influenced by Gender and Body Mass Index (2016) · cites this paper as [52]
In the citing paper
“Consumption of milk fat has been shown to alter bile acid composition, promoting expansion of the sulphite-reducing pathobiont Bilophila wadsworthia and exacerbating colitis in IL10 knockout mice69.”
From Diet and the Intestinal Microbiome: Associations, Functions, and Implications for Health and Disease (2014) · cites this paper as [69]
In the citing paper
“B. wadsworthia increases gut inflammation in mice that lack in the anti-inflammatory cytokine interleukin (IL)-10.”
From Diet–microbiota interactions as moderators of human metabolism (2016) · cites this paper as [111]
In the citing paper
“Levels of the bacterium Bilophila wadsworthia increase when mice are fed a diet rich in milk fat or supplemented with the bile acid taurocholic acid111.”
From Diet–microbiota interactions as moderators of human metabolism (2016) · cites this paper as [111]
In the citing paper
“This is in line with the suggestion that SRB are linked to an inflammatory state of the gut 41, 42.”
From The composition of the gut microbiota shapes the colon mucus barrier (2015) · cites this paper as [42]
In the citing paper
“This pathobiont promotes Th1 type immune responses and increases susceptibility to colitis in IL10–/– mice.137”
From Interaction between microbiota and immunity in health and disease (2020) · cites this paper as [137]
In the citing paper
“The gut microbiota has been shown to differ between mice fed diets that are high or low in fat and between diets that contain equal amounts of fat but from different sources [10–13] (Fig. 1).”
From Dietary lipids, gut microbiota and lipid metabolism (2019) · cites this paper as [13]
In the citing paper
“Milk fat promoted taurine-conjugation of bile acids, which increases the availability of sulfur used by B. wadsworthia.”
From Dietary lipids, gut microbiota and lipid metabolism (2019) · cites this paper as [13]
In the citing paper
“The increased levels of B. wadsworthia were associated with a pro-inflammatory immune response and increased incidence of colitis in genetically susceptible mice.”
From Dietary lipids, gut microbiota and lipid metabolism (2019) · cites this paper as [13]
In the citing paper
“Devkota et al showed that a diet with milk fat, but not diets with lard or safflower oil, increased expansion of Bilophila wadsworthia in mice [13].”
From Dietary lipids, gut microbiota and lipid metabolism (2019) · cites this paper as [13]
In the citing paper
“This phyla has been shown to be intimately tied to a pro-inflammatory state.11,60,61”
From Using Corticosteroids to Reshape the Gut Microbiome: Implications for Inflammatory Bowel Diseases (2015) · cites this paper as [11]
In the citing paper
“For example, high SFA intake has been shown to be associated with reduction in total bacterial abundance in humans (95) and in microbial diversity and richness (95,96), as well as an increase in proinflammatory bacteria (e.g., Bilophila wadsworthia) (96)(97)(98) in mice.”
From Diet and the Microbiota–Gut–Brain Axis: Sowing the Seeds of Good Mental Health (2021) · cites this paper as [96]
In the citing paper
“animals fed with a diet rich in animal-derived saturated fats demonstrated a significant increase in Proteobacteria (Bilophila wadsworthia) abundance (Devkota et al., 2012).”
From The Microbiota-Gut-Brain Axis (2019) · cites this paper as Devkota et al., 2012
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Citations
Cites
Molodecky, N. A., Soon, I. S., Rabi, D. M., Ghali, W. A., Ferris, M., Chernoff, G., Benchimol, E. I., Panaccione, R., Ghosh, S., Barkema, H. W., et al. (2012) · Gastroenterology · doi:10.1053/j.gastro.2011.10.001 · Cited by 4,833
Turnbaugh, P. J., Bäckhed, F., Fulton, L., & Gordon, J. I. (2008) · Cell Host & Microbe · doi:10.1016/j.chom.2008.02.015 · Cited by 2,915
High-Fat Diet Determines the Composition of the Murine Gut Microbiome Independently of Obesity
Hildebrandt, M. A., Hoffmann, C., Sherrill–Mix, S. A., Keilbaugh, S. A., Hamady, M., Chen, Y., Knight, R., Ahima, R. S., Bushman, F., & Wu, G. D. (2009) · Gastroenterology · doi:10.1053/j.gastro.2009.08.042 · Cited by 1,576
Diet, gut microbiota and immune responses
Maslowski, K. M., & Mackay, C. R. (2011) · Nature Immunology · doi:10.1038/ni0111-5 · Cited by 1,261
Berg, D., Davidson, N. M., Kühn, R., Müller, W., Menon, S., Holland, G., Thompson-Snipes, L., Leach, M. W., & Rennick, D. M. (1996) · Journal of Clinical Investigation · doi:10.1172/jci118861 · Cited by 1,125
The human gut microbiome: ecology and recent evolutionary changes
Walter, J., & Ley, R. (2011) · Annual Review of Microbiology · doi:10.1146/annurev-micro-090110-102830 · Cited by 720
Wang, Y., Hoenig, J. D., Malin, K. J., Qamar, S., Petrof, E. O., Sun, J., Antonopoulos, D. A., Chang, E. B., & Claud, E. C. (2009) · The ISME Journal · doi:10.1038/ismej.2009.37 · Cited by 600
Sulfate-reducing bacteria in human feces and their association with inflammatory bowel diseases
Loubinoux, J., Bronowicki, J., Pereira, I. A. C., Mougenel, J.-L., & Faou, A. L. (2002) · FEMS Microbiology Ecology · doi:10.1111/j.1574-6941.2002.tb00942.x · Cited by 404
Evidence That Hydrogen Sulfide Is a Genotoxic Agent
Attene‐Ramos, M. S., Wagner, E. D., Plewa, M. J., & Gaskins, H. R. (2006) · Molecular Cancer Research · doi:10.1158/1541-7786.mcr-05-0126 · Cited by 367
Dussurget, O., Cabanes, D., Dehoux, P., Lecuit, M., Buchrieser, C., Glaser, P., & Cossart, P. (2002) · Molecular Microbiology · doi:10.1046/j.1365-2958.2002.03080.x · Cited by 356
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Rahman, M. M., Islam, M. R., Shohag, S., Ahasan, M. T., Sarkar, N., Khan, H., Hasan, A. M., Cavalu, S. D., & Rauf, A. (2022) · Biomedicine & Pharmacotherapy · doi:10.1016/j.biopha.2022.112898 · Cited by 133
Tagliabue, A., Ferraris, C., Uggeri, F., Trentani, C., Bertoli, S., de Giorgis, V., Veggiotti, P., & Elli, M. (2017) · Clinical Nutrition ESPEN · doi:10.1016/j.clnesp.2016.11.003 · Cited by 126
Wu, T., Yang, L., Jiang, J., Ni, Y., Zhu, J., Zheng, X., Wang, Q., Lu, X., & Fu, Z. (2018) · Life Sciences · doi:10.1016/j.lfs.2017.11.049 · Cited by 126
Holscher, H., Taylor, A., Swanson, K., Novotny, J., & Baer, D. (2018) · Nutrients · doi:10.3390/nu10020126 · Cited by 126
Cross-talk between bile acids and intestinal microbiota in host metabolism and health
Nie, Y., Hu, J. P., & Yan, X. (2015) · Journal of Zhejiang University SCIENCE B · doi:10.1631/jzus.b1400327 · Cited by 136
The murine lung microbiome in relation to the intestinal and vaginal bacterial communities
Barfod, K. K., Roggenbuck, M., Hansen, L. H., Schjørring, S., Larsen, S. E., Sørensen, S. J., & Krogfelt, K. A. (2013) · BMC Microbiology · doi:10.1186/1471-2180-13-303 · Cited by 126
Vildagliptin increases butyrate-producing bacteria in the gut of diabetic rats
Zhang, Q., Xiao, X., Li, M., Yu, M., Ping, F., Zheng, J., Wang, T., & Wang, X. (2017) · PLOS ONE · doi:10.1371/journal.pone.0184735 · Cited by 124
Diet, gut microbes, and the pathogenesis of inflammatory bowel diseases
Dolan, K. T., & Chang, E. B. (2016) · Molecular Nutrition & Food Research · doi:10.1002/mnfr.201600129 · Cited by 136
The intestinal microbiota and host immune interactions in the critically ill
Schuijt, T. J., van der Poll, T., de Vos, W. M., & Wiersinga, W. J. (2013) · Trends in Microbiology · doi:10.1016/j.tim.2013.02.001 · Cited by 123
Dietary cholesterol directly induces acute inflammasome-dependent intestinal inflammation
Progatzky, F., Sangha, N. S., Yoshida, N., McBrien, M., Cheung, J. L. Y., Shia, A., Scott, J., Marchesi, J. R., Lamb, J. R., Bugeon, L., et al. (2014) · Nature Communications · doi:10.1038/ncomms6864 · Cited by 126
Polyphenols and Their Interactions With Other Dietary Compounds: Implications for Human Health
Kardum, N., & Glibetić, M. (2018) · Advances in food and nutrition research · doi:10.1016/bs.afnr.2017.12.001 · Cited by 131
Cheng, C., Wei, H., Xu, C., Xie, X., Jiang, S., & Peng, J. (2018) · Applied and Environmental Microbiology · doi:10.1128/aem.01047-18 · Cited by 123
Laudisi, F., Fusco, D. D., Dinallo, V., Stolfi, C., Grazia, A. D., Marafini, I., Colantoni, A., Ortenzi, A., Alteri, C., Guerrieri, F., et al. (2018) · Cellular and Molecular Gastroenterology and Hepatology · doi:10.1016/j.jcmgh.2018.09.002 · Cited by 139
Altered Gut Microbiota Related to Inflammatory Responses in Patients With Huntington’s Disease
Du, G., Dong, W., Yang, Q., Yu, X., Ma, J., Gu, W., & Huang, Y. M. (2021) · Frontiers in Immunology · doi:10.3389/fimmu.2020.603594 · Cited by 126
Disease-Associated Changes in Bile Acid Profiles and Links to Altered Gut Microbiota
Joyce, S. A., & Gahan, C. G. M. (2017) · Digestive Diseases · doi:10.1159/000450907 · Cited by 130
Nutrition and Genetics in NAFLD: The Perfect Binomium
Meroni, M., Longo, M., Rustichelli, A., & Dongiovanni, P. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21082986 · Cited by 125
Wolf, P. G., Cowley, E. S., Breister, A. M., Matatov, S., Lucio, L., Polak, P., Ridlon, J. M., Gaskins, H. R., & Anantharaman, K. (2022) · Microbiome · doi:10.1186/s40168-022-01242-x · Cited by 126
Burton, K. J., Rosikiewicz, M., Pimentel, G., Bütikofer, U., von Ah, U., Voirol, M.-J., Croxatto, A., Aeby, S., Drai, J., McTernan, P. G., et al. (2017) · British Journal of Nutrition · doi:10.1017/s0007114517000885 · Cited by 121
High School Diet and Risk of Crohnʼs Disease and Ulcerative Colitis
Ananthakrishnan, A. N., Khalili, H., Song, M., Higuchi, L. M., Richter, J. M., Nimptsch, K., Wu, K., & Chan, A. T. (2015) · Inflammatory Bowel Diseases · doi:10.1097/mib.0000000000000501 · Cited by 121
Update on primary sclerosing cholangitis
Karlsen, T. H., & Boberg, K. M. (2013) · Journal of Hepatology · doi:10.1016/j.jhep.2013.03.015 · Cited by 123
Schoeler, M., Ellero‐Simatos, S., Birkner, T., Mayneris‐Perxachs, J., Olsson, L. M., Brolin, H., Löber, U., Kraft, J. D., Polizzi, A., Martí-Navas, M., et al. (2023) · Nature Communications · doi:10.1038/s41467-023-41074-3 · Cited by 135
Gruber, L., Kisling, S., Lichti, P., Martin, F., May, S., Klingenspor, M., Lichtenegger, M., Rychlik, M., & Haller, D. (2013) · PLoS ONE · doi:10.1371/journal.pone.0071661 · Cited by 119
Microbiota in obesity: interactions with enteroendocrine, immune and central nervous systems
Mulders, R. J., de Git, K. C. G., Schéle, E., Dickson, S. L., Sanz, Y., & Adan, R. A. H. (2018) · Obesity Reviews · doi:10.1111/obr.12661 · Cited by 120
The microbiota and the gut–liver axis in primary sclerosing cholangitis
Hov, J. R., & Karlsen, T. H. (2022) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/s41575-022-00690-y · Cited by 133
Natividad, J. M., Pinto-Sánchez, M. I., Galipeau, H. J., Jury, J., Jordana, M., Reinisch, W., Collins, S. M., Bercik, P., Surette, M. G., Allen‐Vercoe, E., et al. (2015) · Inflammatory Bowel Diseases · doi:10.1097/mib.0000000000000422 · Cited by 119
Li, K., Dan, Z., Gesang, L., Wang, H., Zhou, Y., Du, Y., Ren, Y., Shi, Y., & Nie, Y. (2016) · PLoS ONE · doi:10.1371/journal.pone.0155863 · Cited by 120
Pathogens, Commensal Symbionts, and Pathobionts: Discovery and Functional Effects on the Host
Hornef, M. W. (2015) · ILAR Journal · doi:10.1093/ilar/ilv007 · Cited by 131
Nishitsuji, K., Xiao, J., Nagatomo, R., Umemoto, H., Morimoto, Y., Akatsu, H., Inoue, K., & Tsuneyama, K. (2017) · Scientific Reports · doi:10.1038/s41598-017-16189-5 · Cited by 121
Rodríguez-Morató, J., Matthan, N. R., Liu, J., de la Torre, R., & Chen, C.-Y. O. (2018) · The Journal of Nutritional Biochemistry · doi:10.1016/j.jnutbio.2018.08.019 · Cited by 121
Microbiota in cancer development and treatment
Raza, M. H., Gul, K., Arshad, A., Riaz, N., Waheed, U., Rauf, A., Aldakheel, F. M., Alduraywish, S. A., Rehman, M. U., Abdullah, M., et al. (2018) · Journal of Cancer Research and Clinical Oncology · doi:10.1007/s00432-018-2816-0 · Cited by 122
Implications of Diet and The Gut Microbiome in Neuroinflammatory and Neurodegenerative Diseases
Hirschberg, S., Gisevius, B., Duscha, A., & Haghikia, A. (2019) · International Journal of Molecular Sciences · doi:10.3390/ijms20123109 · Cited by 120
Immune aspects of the pathogenesis of inflammatory bowel disease
Hisamatsu, T., Kanai∥, T., Mikami, Y., Yoneno∥, K., Matsuoka, K., & Hibi∥, T. (2012) · Pharmacology & Therapeutics · doi:10.1016/j.pharmthera.2012.10.008 · Cited by 117
Bile acid dysregulation, gut dysbiosis, and gastrointestinal cancer
Tsuei, J., Chau, T., Mills, D. A., & Wan, Y. Y. (2014) · Experimental Biology and Medicine · doi:10.1177/1535370214538743 · Cited by 119
Beilharz, J. E., Kaakoush, N. O., Maniam, J., & Morris, M. J. (2018) · Molecular Psychiatry · doi:10.1038/mp.2017.38 · Cited by 116
Diet, microbiota, and dysbiosis: a ‘recipe’ for colorectal cancer
Vipperla, K., & O’Keefe, S. J. (2016) · Food & Function · doi:10.1039/c5fo01276g · Cited by 117
High-Fat Diet Consumption Induces Microbiota Dysbiosis and Intestinal Inflammation in Zebrafish
Arias-Jayo, N., Abecia, L., Alonso‐Sáez, L., Ramirez‐Garcia, A., Rodriguez, A., & Pardo, M. Á. (2018) · Microbial Ecology · doi:10.1007/s00248-018-1198-9 · Cited by 118
Zhang, Y., Lu, R., Wu, S., Chatterjee, I., Zhou, D., Xia, Y., & Sun, J. (2020) · Cellular and Molecular Gastroenterology and Hepatology · doi:10.1016/j.jcmgh.2020.05.010 · Cited by 113
Campmans-Kuijpers, M. J. E., & Dijkstra, G. D. H. (2021) · Nutrients · doi:10.3390/nu13041067 · Cited by 124
Schnabl, B., Damman, C. J., & Carr, R. M. (2025) · Journal of Clinical Investigation · doi:10.1172/jci186423 · Cited by 133
Review article: evidence‐based dietary advice for patients with inflammatory bowel disease
Richman, E., & Rhodes, J. M. (2013) · Alimentary Pharmacology & Therapeutics · doi:10.1111/apt.12500 · Cited by 115
Combinatorial Effects of Diet and Genetics on Inflammatory Bowel Disease Pathogenesis
Dixon, L. J., Kabi, A., Nickerson, K. P., & McDonald, C. (2015) · Inflammatory Bowel Diseases · doi:10.1097/mib.0000000000000289 · Cited by 113
Maier, E., Anderson, R. C., & Roy, N. C. (2014) · Nutrients · doi:10.3390/nu7010045 · Cited by 123
Diet and Inflammatory Bowel Disease.
Knight-Sepulveda, K., Kais, S., Santaolalla, R., & Abreu, M. T. (2015) · PubMed Central · Cited by 114
Rethinking Diet to Aid Human–Microbe Symbiosis
Derrien, M., & Veiga, P. (2016) · Trends in Microbiology · doi:10.1016/j.tim.2016.09.011 · Cited by 118
Knutson, C. G., Mangerich, A., Zeng, Y., Raczynski, A. R., Liberman, R. G., Kang, P., Ye, W., Prestwich, E. G., Lü, K., Wishnok, J. S., et al. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1222669110 · Cited by 116
Marine ω-3 polyunsaturated fatty acid intake and survival after colorectal cancer diagnosis
Song, M., Zhang, X., Meyerhardt, J. A., Giovannucci, E. L., Ogino, S., Fuchs, C. S., & Chan, A. T. (2016) · Gut · doi:10.1136/gutjnl-2016-311990 · Cited by 115
Boneh, R. S., Levine, A., Lomer, M. C. E., Wierdsma, N., Allan, P., Fiorino, G., Gatti, S., Jonkers, D. M. A. E., Kierkuś, J., Katsanos, K. H., et al. (2017) · Journal of Crohn s and Colitis · doi:10.1093/ecco-jcc/jjx109 · Cited by 116
Camilleri, M., Lyle, B. J., Madsen, K. L., Sonnenburg, J. L., Verbeke, K., & Wu, G. D. (2019) · American Journal of Physiology-Gastrointestinal and Liver Physiology · doi:10.1152/ajpgi.00063.2019 · Cited by 115
Microbial enzymes induce colitis by reactivating triclosan in the mouse gastrointestinal tract
Zhang, J., Walker, M. E., Sanidad, K. Z., Zhang, H., Liang, Y., Zhao, E., Chacón-Vargas, K., Yeliseyev, V., Parsonnet, J., Haggerty, T. D., et al. (2022) · Nature Communications · doi:10.1038/s41467-021-27762-y · Cited by 113
The Interplay of the Gut Microbiome, Bile Acids, and Volatile Organic Compounds
Sagar, N. M., Cree, I. A., Covington, J. A., & Arasaradnam, R. P. (2015) · Gastroenterology Research and Practice · doi:10.1155/2015/398585 · Cited by 110
Novel insights into autoimmune liver diseases provided by genome-wide association studies
Mells, G. F., Kaser, A., & Karlsen, T. H. (2013) · Journal of Autoimmunity · doi:10.1016/j.jaut.2013.07.004 · Cited by 111
Spooren, C. E. G. M., Pierik, M. J., Zeegers, M. P., Feskens, E. J. M., Masclee, A., & Jonkers, D. M. A. E. (2013) · Alimentary Pharmacology & Therapeutics · doi:10.1111/apt.12501 · Cited by 110
Herpertz‐Dahlmann, B., Seitz, J., & Baines, J. F. (2017) · European Child & Adolescent Psychiatry · doi:10.1007/s00787-017-0945-7 · Cited by 115
Lee, J.-C., Lee, H.-Y., Kim, T. K., Kim, M., Park, Y. M., Kim, J., Park, K., Kweon, M., Kim, S., Bae, J., et al. (2017) · PLoS ONE · doi:10.1371/journal.pone.0187515 · Cited by 114
Bacterial Dissemination to the Brain in Sepsis
Singer, B. H., Dickson, R. P., Denstaedt, S. J., Newstead, M. W., Kim, K., Falkowski, N. R., Erb‐Downward, J. R., Schmidt, T. M., Huffnagle, G. B., & Standiford, T. J. (2017) · American Journal of Respiratory and Critical Care Medicine · doi:10.1164/rccm.201708-1559oc · Cited by 112
NMN Maintains Intestinal Homeostasis by Regulating the Gut Microbiota
Huang, P., Jiang, A., Wang, X., Zhou, Y., Tang, W., Ren, C., Qian, X., Zhou, Z., & Gong, A. (2021) · Frontiers in Nutrition · doi:10.3389/fnut.2021.714604 · Cited by 110
Collins, B., Hoffman, J. B., Martinez, K., Grace, M. H., Lila, M. A., Cockrell, C., Nadimpalli, A., Chang, E. B., Chuang, C., Wei, Z., et al. (2016) · The Journal of Nutritional Biochemistry · doi:10.1016/j.jnutbio.2015.12.021 · Cited by 109
Kumar, M., Kissoon‐Singh, V., Leon‐Coria, A., Moreau, F., & Chadee, K. (2016) · American Journal of Physiology-Gastrointestinal and Liver Physiology · doi:10.1152/ajpgi.00298.2016 · Cited by 114
Early-Life Sugar Consumption Affects the Rat Microbiome Independently of Obesity
Noble, E. E., Hsu, T. M., Jones, R. B., Fodor, A. A., Goran, M. I., & Kanoski, S. E. (2016) · Journal of Nutrition · doi:10.3945/jn.116.238816 · Cited by 112
Wegorzewska, M. M., Glowacki, R. W. P., Hsieh, S. A., Donermeyer, D. L., Hickey, C. A., Horvath, S. C., Martens, E. C., Stappenbeck, T. S., & Allen, P. M. (2019) · Science Immunology · doi:10.1126/sciimmunol.aau9079 · Cited by 107
Gut microbiota and immunity relevance in eubiosis and dysbiosis
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Lin, H., Yu, Y., Zhu, L., Lai, N., Zhang, L., Guo, Y., Lin, X., Yang, D., Ren, N., Zhu, Z., et al. (2023) · Redox Biology · doi:10.1016/j.redox.2023.102601 · Cited by 111
Gut microbiota, cirrhosis, and alcohol regulate bile acid metabolism in the gut
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Dinh, D. M., Ramadass, B., Kattula, D., Sarkar, R., Braunstein, P., Tai, A., WANKE, C. A., Hassoun, S., Kane, A. V., Naumova, E. N., et al. (2016) · PLoS ONE · doi:10.1371/journal.pone.0155405 · Cited by 114
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Shih, V. F.-S., Cox, J. H., Kljavin, N. M., Dengler, H. S., Reichelt, M., Kumar, P., Rangell, L. K., Kolls, J. K., Diehl, L. J., Ouyang, W., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1323852111 · Cited by 115
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Kuhn, K. A., & Stappenbeck, T. S. (2013) · Seminars in Immunology · doi:10.1016/j.smim.2013.10.002 · Cited by 108
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Wędrychowicz, A. (2016) · World Journal of Gastroenterology · doi:10.3748/wjg.v22.i3.1045 · Cited by 105
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Future directions in inflammatory bowel disease management
D’Haens, G., Sartor, R. B., Silverberg, M. S., Petersson, J. H., & Rutgeerts, P. J. (2014) · Journal of Crohn s and Colitis · doi:10.1016/j.crohns.2014.02.025 · Cited by 108
Yang, I., Eibach, D., Kops, F., Brenneke, B., Woltemate, S., Schulze, J., Bleich, A., Gruber, A. D., Muthupalani, S., Fox, J. G., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0070783 · Cited by 110
Dilmore, A. H., Martino, C., Neth, B. J., West, K., Zemlin, J., Rahman, G., Panitchpakdi, M. W., Meehan, M. J., Weldon, K. C., Blach, C., et al. (2023) · Alzheimer s & Dementia · doi:10.1002/alz.13007 · Cited by 108
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Betrapally, N. S., Gillevet, P. M., & Bajaj, J. S. (2016) · Translational research · doi:10.1016/j.trsl.2016.07.005 · Cited by 106
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Self-citationThe colonic microbiota in health and disease
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Lappi, J., Salojärvi, J., Kolehmainen, M., Mykkänen, H. M., Poutanen, K. S., de Vos, W. M., & Salonen, A. (2013) · Journal of Nutrition · doi:10.3945/jn.112.172668 · Cited by 102
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Frommherz, L., Bub, A., Hummel, E., Rist, M. J., Röth, A., Watzl, B., & Kulling, S. E. (2016) · PLoS ONE · doi:10.1371/journal.pone.0153959 · Cited by 105
Carco, C., Young, W., Gearry, R. B., Talley, N. J., McNabb, W. C., & Roy, N. C. (2020) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2020.00468 · Cited by 105
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Opstelten, J. L., Leenders, M. B., Dik, V. K., Chan, S. S. M., van Schaik, F. D. M., Khaw, K., Luben, R., Hallmans, G., Karling, P., Lindgren, S. C., et al. (2016) · Inflammatory Bowel Diseases · doi:10.1097/mib.0000000000000798 · Cited by 100
Ryan, P. M., London, L. E. E., Bjorndahl, T. C., Mandal, R., Murphy, K., Fitzgerald, G. F., Shanahan, F., Ross, R. P., Wishart, D. S., Caplice, N. M., et al. (2017) · Microbiome · doi:10.1186/s40168-017-0246-x · Cited by 97
Hoffman, J. B., Collins, B., Wolf, P. G., Martinez, K., Shen, W., Chuang, C., Wei, Z., Cooney, P. T., Cockrell, C., Chang, E. B., et al. (2015) · The Journal of Nutritional Biochemistry · doi:10.1016/j.jnutbio.2015.08.027 · Cited by 97
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Gupta, V. K., Cunningham, K. Y., Bakshi, U., Hur, B., Huang, H., Warrington, K. J., Taneja, V., Myasoedova, E., Davis, J. M., & Sung, J. (2021) · Genome Medicine · doi:10.1186/s13073-021-00957-0 · Cited by 95
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Sun, J., Fan, J., Li, T., Yan, X., & Jiang, Y. (2022) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.2c04817 · Cited by 100
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Metadata
- Authors
- Devkota, S., Wang, Y., Musch, M. W., Leone, V., Fehlner-Peach, H., Nadimpalli, A., Antonopoulos, D. A., Jabri, B., & Chang, E. B.
- Affiliations
- University of Chicago (US)
- Argonne National Laboratory (US)
- Corresponding author
- Chang, Eugene B.
- ORCID
- Venue
- Nature
- Published
- 2012-06-13
- Volume
- 487
- Issue
- 7405
- Pages
- 104-108
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- PMC
- PMC3393783
- OpenAlex
- W2151798187
- Cited by
- 1,904
- References
- 27
- Citations by year
- 2026: 106 · 2025: 137 · 2024: 144 · 2023: 140 · 2022: 164 · 2021: 162 · 2020: 139 · 2019: 144 · 2018: 133 · 2017: 144 · 2016: 125 · 2015: 115 · 2014: 118 · 2013: 103 · 2012: 26
- FWCI
- 46.57
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- eScholarship (California Digital Library) (submittedVersion)
- Funders
- National Institute of Diabetes and Digestive and Kidney Diseases (R01DK047722, DK-47722, R37DK047722, R01DK097268, T32DK007074, UH3DK083993, DK42086, P30DK042086)
- National Center for Complementary and Integrative Health (F31AT006073)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Medicine › Gastroenterology › Inflammatory Bowel Disease
- Health Sciences › Medicine › Gastroenterology › Microscopic Colitis
- Keywords
- taurocholate, milk fat, saturated fatty acids, Bilophila wadsworthia, colitis, IL-10-deficient mice, bile acid conjugation, taurine, gut dysbiosis, inflammatory bowel disease, Th1 response, Western diet, unsaturated fatty acids, safflower oil, gut microbiota
- MeSH terms
- Animals, Bile Acids and Salts, Colitis, Dietary Fats, Inflammation, Mice, Inbred C57BL, Milk, Molecular Sequence Data, Safflower Oil, Sulfites, Taurine, Taurocholic Acid, Inflammatory Bowel Diseases, Interleukin-10, Th1 Cells, Diet, Fat-Restricted, Bilophila, Mice, Metagenome
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