FOXO3A directs a protective autophagy program in haematopoietic stem cells
Open accessAbstract
Blood production is ensured by rare, self-renewing haematopoietic stem cells (HSCs). How HSCs accommodate the diverse cellular stresses associated with their life-long activity remains elusive. Here we identify autophagy as an essential mechanism protecting HSCs from metabolic stress. We show that mouse HSCs, in contrast to their short-lived myeloid progeny, robustly induce autophagy after ex vivo cytokine withdrawal and in vivo calorie restriction. We demonstrate that FOXO3A is critical to maintain a gene expression program that poises HSCs for rapid induction of autophagy upon starvation. Notably, we find that old HSCs retain an intact FOXO3A-driven pro-autophagy gene program, and that ongoing autophagy is needed to mitigate an energy crisis and allow their survival. Our results demonstrate that autophagy is essential for the life-long maintenance of the HSC compartment and for supporting an old, failing blood system.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Autophagy induction by FoxO3A is an essential mechanism that protects HSCs from metabolic stress in aging.
“Warr et al., who reported autophagy induction by FoxO3A to be an essential mechanism that protects HSCs from metabolic stress in aging76.”
From Stem cell aging: mechanisms, regulators and therapeutic opportunities (2014) · cites this paper as [76]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Danial, N. N., & Korsmeyer, S. J. (2004) · Cell · doi:10.1016/s0092-8674(04)00046-7 · Cited by 4,651 · see citing works
Mice deficient for p53 are developmentally normal but susceptible to spontaneous tumours
Donehower, L. A., Harvey, M., Slagle, B. L., McArthur, M. J., Montgomery, C. A., Butel, J. S., & Bradley, A. (1992) · Nature · doi:10.1038/356215a0 · Cited by 4,649 · see citing works
Methods in Mammalian Autophagy Research
Mizushima, N., Yoshimori, T., & Levine, B. (2010) · Cell · doi:10.1016/j.cell.2010.01.028 · Cited by 4,497 · see citing works
Regulation mechanisms and signaling pathways of autophagy
He, C., & Klionsky, D. J. (2009) · Annual Review of Genetics · doi:10.1146/annurev-genet-102808-114910 · Cited by 3,609 · see citing works
Self-eating and self-killing: crosstalk between autophagy and apoptosis
Maiuri, M. C., Zalckvar, E., Kimchi, A., & Kroemer, G. (2007) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2239 · Cited by 3,560 · see citing works
Autophagy in immunity and inflammation
Levine, B., Mizushima, N., & Virgin, H. W. (2011) · Nature · doi:10.1038/nature09782 · Cited by 3,289 · see citing works
Hematopoiesis: An Evolving Paradigm for Stem Cell Biology
Orkin, S. H., & Zon, L. I. (2008) · Cell · doi:10.1016/j.cell.2008.01.025 · Cited by 2,570 · see citing works
Mizushima, N., Yamamoto, A., Matsui, M., Yoshimori, T., & Ohsumi, Y. (2003) · Molecular Biology of the Cell · doi:10.1091/mbc.e03-09-0704 · Cited by 2,323 · see citing works
Rubinsztein, D. C., Mariño, G., & Kroemer, G. (2011) · Cell · doi:10.1016/j.cell.2011.07.030 · Cited by 2,107 · see citing works
FoxO3 Controls Autophagy in Skeletal Muscle In Vivo
Mammucari, C., Milan, G., Romanello, V., Masiero, E., Rudolf, R., Del Piccolo, P., Burden, S. J., Di Lisi, R., Sandri, C., Zhao, J., et al. (2007) · Cell Metabolism · doi:10.1016/j.cmet.2007.11.001 · Cited by 1,953 · see citing works
Inducible Gene Targeting in Mice
Kühn, R., Schwenk, F., Aguet, M., & Rajewsky, K. (1995) · Science · doi:10.1126/science.7660125 · Cited by 1,915 · see citing works
FoxOs Are Critical Mediators of Hematopoietic Stem Cell Resistance to Physiologic Oxidative Stress
Tothova, Z., Kollipara, R., Huntly, B. J., Lee, B. H., Castrillon, D. H., Cullen, D. E., McDowell, E. P., Lazo-Kallanian, S., Williams, I. R., Sears, C., et al. (2007) · Cell · doi:10.1016/j.cell.2007.01.003 · Cited by 1,562 · see citing works
Lindsten, T., Ross, A. J., King, A., Zong, W.-X., Rathmell, J. C., Shiels, H. A., Ulrich, E., Waymire, K. G., Mahar, P., Frauwirth, K., et al. (2000) · Molecular Cell · doi:10.1016/s1097-2765(00)00136-2 · Cited by 1,489 · see citing works
Growth factor regulation of autophagy and cell survival in the absence of apoptosis
Lum, J. J., Bauer, D. E., Kong, M., Harris, M. H., Li, C., Lindsten, T., & Thompson, C. B. (2005) · Cell · doi:10.1016/j.cell.2004.11.046 · Cited by 1,487 · see citing works
Suppression of Ovarian Follicle Activation in Mice by the Transcription Factor Foxo3a
Castrillón, D. H., Miao, L., Kollipara, R., Horner, J. W., & DePinho, R. A. (2003) · Science · doi:10.1126/science.1086336 · Cited by 956 · see citing works
Stems Cells and the Pathways to Aging and Cancer
Rossi, D. J., Jamieson, C. H. M., & Weissman, I. L. (2008) · Cell · doi:10.1016/j.cell.2008.01.036 · Cited by 895 · see citing works
Foxo3a is essential for maintenance of the hematopoietic stem cell pool
Miyamoto, K., Kazuhito, N., & Atsushi, H. (2009) · Kanazawa University Repository for Academic Resources (DSpace) (Kanazawa University) · Cited by 858 · see citing works
Stem cells, ageing and the quest for immortality
Rando, T. A. (2006) · Nature · doi:10.1038/nature04958 · Cited by 695 · see citing works
mTOR Regulation and Therapeutic Rejuvenation of Aging Hematopoietic Stem Cells
Chen, C., Liu, Y., Liu, Y., & Zheng, P. (2009) · Science Signaling · doi:10.1126/scisignal.2000559 · Cited by 680 · see citing works
The autophagy protein Atg7 is essential for hematopoietic stem cell maintenance
Mortensen, M., Soilleux, E. J., Djordjevic, G., Tripp, R., Lutteropp, M., Sadighi-Akha, E., Stranks, A. J., Glanville, J., Knight, S., W. Jacobsen, S.-E., et al. (2011) · Journal of Experimental Medicine · doi:10.1084/jem.20101145 · Cited by 657 · see citing works
A critical role for the autophagy gene Atg5 in T cell survival and proliferation
Pua, H. H., Dzhagalov, I., Chuck, M., Mizushima, N., & He, Y.-W. (2007) · The Journal of Experimental Medicine · doi:10.1084/jem.20061303 · Cited by 622 · see citing works
Hematopoietic Stem Cell Quiescence Promotes Error-Prone DNA Repair and Mutagenesis
Mohrin, M., Bourke, E., Alexander, D., Warr, M. R., Barry-Holson, K., Le Beau, M. M., Morrison, C. G., & Passegué, E. (2010) · Cell Stem Cell · doi:10.1016/j.stem.2010.06.014 · Cited by 599 · see citing works
Self-citationKundu, M., Lindsten, T., Yang, C.-Y., Wu, J., Zhao, F., Zhang, J., Selak, M. A., Ney, P. A., & Thompson, C. B. (2008) · Blood · doi:10.1182/blood-2008-02-137398 · Cited by 571 · see citing works
Maiuri, M. C., Galluzzi, L., Morselli, E., Kepp, O., Malik, S. A., & Kroemer, G. (2010) · Current Opinion in Cell Biology · doi:10.1016/j.ceb.2009.12.001 · Cited by 498 · see citing works
Autophagy facilitates glycolysis during Ras-mediated oncogenic transformation
Lock, R., Roy, S., Kenific, C. M., Su, J. S., Salas, E., Ronen, S. M., & Debnath, J. (2011) · Molecular Biology of the Cell · doi:10.1091/mbc.e10-06-0500 · Cited by 467 · see citing works
Self-citationCell cycle regulation in hematopoietic stem cells
Pietras, E. M., Warr, M. R., & Passegué, E. (2011) · Journal of Cell Biology · doi:10.1083/jcb.201102131 · Cited by 447 · see citing works
Self-citationDoes Autophagy Contribute To Cell Death?
Debnath, J., Baehrecke, E. H., & Kroemer, G. (2005) · Autophagy · doi:10.4161/auto.1.2.1738 · Cited by 444 · see citing works
Self-citationMortensen, M., Ferguson, D. J. P., Edelmann, M. J., Kessler, B. M., Morten, K., Komatsu, M., & Simon, A. K. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0913170107 · Cited by 388 · see citing works
The autophagy gene <i>ATG5</i> plays an essential role in B lymphocyte development
Miller, B. C., Zhao, Z., Stephenson, L. M., Cadwell, K., Pua, H. H., Lee, H. K., Mizushima, N., Iwasaki, A., He, Y.-W., Swat, W., et al. (2008) · Autophagy · doi:10.4161/auto.5474 · Cited by 352 · see citing works
ATG12 Conjugation to ATG3 Regulates Mitochondrial Homeostasis and Cell Death
Radoshevich, L., Murrow, L., Chen, N., Fernandez, E., Roy, S., Fung, C., & Debnath, J. (2010) · Cell · doi:10.1016/j.cell.2010.07.018 · Cited by 290 · see citing works
Self-citationRantes/Ccl5 influences hematopoietic stem cell subtypes and causes myeloid skewing
Ergen, A. V., Boles, N. C., & Goodell, M. A. (2012) · Blood · doi:10.1182/blood-2011-11-391730 · Cited by 280 · see citing works
FIP200 is required for the cell-autonomous maintenance of fetal hematopoietic stem cells
Liu, F., Lee, J., Wei, H., Tanabe, O., Engel, J. D., Morrison, S. J., & Guan, J. (2010) · Blood · doi:10.1182/blood-2010-06-288589 · Cited by 234 · see citing works
Essential role of BAX,BAK in B cell homeostasis and prevention of autoimmune disease
Takeuchi, O., Fisher, J. K., Suh, H., Harada, H., Malynn, B. A., & Korsmeyer, S. J. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0504783102 · Cited by 203 · see citing works
Balancing dormant and self-renewing hematopoietic stem cells
Wilson, A., Laurenti, E., & Trumpp, A. (2009) · Current Opinion in Genetics & Development · doi:10.1016/j.gde.2009.08.005 · Cited by 201 · see citing works
Autophagic and apoptotic response to stress signals in mammalian cells
Ferraro, E., & Cecconi, F. (2007) · Archives of Biochemistry and Biophysics · doi:10.1016/j.abb.2007.02.006 · Cited by 170 · see citing works
Utilizing flow cytometry to monitor autophagy in living mammalian cells
Shvets, E., Fass, E., & Elazar, Z. (2008) · Autophagy · doi:10.4161/auto.5939 · Cited by 163 · see citing works
Santaguida, M. A., Schepers, K., King, B., Sabnis, A. J., Forsberg, E. C., Attema, J. L., Braun, B. S., & Passegue, E. A. (2009) · Cancer Cell · doi:10.1016/j.ccr.2009.02.016 · Cited by 156 · see citing works
Warr, M. R., Pietras, E. M., & Passegué, E. (2011) · WIREs Systems Biology and Medicine · doi:10.1002/wsbm.145 · Cited by 112 · see citing works
Self-citationLife and death in hematopoietic stem cells
Oguro, H., & Iwama, A. (2007) · Current Opinion in Immunology · doi:10.1016/j.coi.2007.05.001 · Cited by 44 · see citing works
Foxo3a is essential for maintenance of the hematopoietic stem cell pool.
Miyamoto, K., Araki, K. Y., Naka, K., Arai, F., Takubo, K., Yamazaki, S., Matsuoka, S., Miyamoto, T., Ito, K., Ohmura, M., et al. (2007) · Cell stem cell · doi:10.1016/j.stem.2007.02.001 · Cited by 41 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Autophagy maintains stemness by preventing senescence
García-Prat, L., Martínez-Vicente, M., Perdiguero, E., Ortet, L., Rodríguez-Ubreva, J., Rebollo, E., Ruiz-Bonilla, V., Gutarra, S., Ballestar, E., Serrano, A. L., et al. (2016) · Nature · doi:10.1038/nature16187 · Cited by 1,355 · see citing works
Metabolic requirements for the maintenance of self-renewing stem cells
Ito, K., & Suda, T. (2014) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3772 · Cited by 1,014 · see citing works
Autophagy at the crossroads of catabolism and anabolism
Kaur, J., & Debnath, J. (2015) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm4024 · Cited by 993 · see citing works
Self-citationAutophagy maintains the metabolism and function of young and old stem cells
Ho, T. T., Warr, M. R., Adelman, E. R., Lansinger, O. M., Flach, J., Verovskaya, E. V., Figueroa, M. E., & Passegué, E. (2017) · Nature · doi:10.1038/nature21388 · Cited by 896 · see citing works
Self-citationFrom haematopoietic stem cells to complex differentiation landscapes
Laurenti, E., & Göttgens, B. (2018) · Nature · doi:10.1038/nature25022 · Cited by 830 · see citing works
Stem cell aging: mechanisms, regulators and therapeutic opportunities
Oh, J., Lee, Y. D., & Wagers, A. J. (2014) · Nature Medicine · doi:10.1038/nm.3651 · Cited by 796 · see citing works
Long live FOXO : unraveling the role of FOXO proteins in aging and longevity
Martins, R., Lithgow, G. J., & Link, W. (2015) · Aging Cell · doi:10.1111/acel.12427 · Cited by 728 · see citing works
MicroRNAs as regulatory elements in immune system logic
Mehta, A., & Baltimore, D. (2016) · Nature Reviews Immunology · doi:10.1038/nri.2016.40 · Cited by 704 · see citing works
The role of protein clearance mechanisms in organismal ageing and age-related diseases
Vı́lchez, D., Sáez, I., & Dillin, A. G. (2014) · Nature Communications · doi:10.1038/ncomms6659 · Cited by 684 · see citing works
The Lysosome as a Regulatory Hub
Perera, R. M., & Zoncu, R. (2016) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev-cellbio-111315-125125 · Cited by 664 · see citing works
Replication stress is a potent driver of functional decline in ageing haematopoietic stem cells
Flach, J., Bakker, S. T., Mohrin, M., Conroy, P. C., Pietras, E. M., Reynaud, D., Alvarez, S., Diolaiti, M. E., Ugarte, F., Forsberg, E. C., et al. (2014) · Nature · doi:10.1038/nature13619 · Cited by 650 · see citing works
Self-citationFOXO transcription factors: key regulators of cellular quality control
Webb, A. E., & Brunet, A. (2014) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2014.02.003 · Cited by 620 · see citing works
Nutrient-sensing nuclear receptors coordinate autophagy
Lee, J. M., Wagner, M., Xiao, R., Kim, K. H., Feng, D., Lazar, M. A., & Moore, D. D. (2014) · Nature · doi:10.1038/nature13961 · Cited by 514 · see citing works
Mitochondrial Sirtuin 3: New emerging biological function and therapeutic target
Zhang, J., Xiang, H., Liu, J., Chen, Y., He, R.-R., & Liu, B. (2020) · Theranostics · doi:10.7150/thno.45922 · Cited by 503 · see citing works
Regulation of autophagy by cytosolic acetyl-coenzyme A
Mariño, G., Pietrocola, F., Eisenberg, T., Kong, Y., Malik, S. A., Andryushkova, A., Schroeder, S., Pendl, T., Harger, A., Niso-Santano, M., et al. (2014) · Molecular Cell · doi:10.1016/j.molcel.2014.01.016 · Cited by 500 · see citing works
Autophagy in cancer metastasis
Mowers, E. E., Sharifi, M. N., & Macleod, K. F. (2016) · Oncogene · doi:10.1038/onc.2016.333 · Cited by 476 · see citing works
Essential role for autophagy in life span extension
Madeo, F., Zimmermann, A., Maiuri, M. C., & Kroemer, G. (2015) · Journal of Clinical Investigation · doi:10.1172/jci73946 · Cited by 464 · see citing works
The return of the nucleus: transcriptional and epigenetic control of autophagy
Füllgrabe, J., Klionsky, D. J., & Joseph, B. (2013) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3716 · Cited by 463 · see citing works
Autophagy and the cell biology of age-related disease
Leidal, A. M., Levine, B., & Debnath, J. (2018) · Nature Cell Biology · doi:10.1038/s41556-018-0235-8 · Cited by 424 · see citing works
Self-citationAutophagy in cancer: moving from understanding mechanism to improving therapy responses in patients
Levy, J. M. M., & Thorburn, A. M. (2019) · Cell Death and Differentiation · doi:10.1038/s41418-019-0474-7 · Cited by 424 · see citing works
Transcription factor NFE2L2/NRF2 is a regulator of macroautophagy genes
Pajares, M., Jiménez-Moreno, N., García‐Yagüe, Á. J., Escoll, M., CEBALLOS, M. L. D., LEUVEN, F. V., Rábano, A., Yamamoto, M. P., Rojo, A. I., & Cuadrado, A. (2016) · Autophagy · doi:10.1080/15548627.2016.1208889 · Cited by 405 · see citing works
Adrenergic nerve degeneration in bone marrow drives aging of the hematopoietic stem cell niche
Maryanovich, M., Zahalka, A. H., Pierce, H., Pinho, S., Nakahara, F., Asada, N., Wei, Q., Wang, X., Ciero, P., Xu, J., et al. (2018) · Nature Medicine · doi:10.1038/s41591-018-0030-x · Cited by 389 · see citing works
Autophagy as a molecular target for cancer treatment
Kocatürk, N. M., Akkoç, Y., Kığ, C., Bayraktar, O., Gözüaçık, D., & Kutlu, Ö. (2019) · European Journal of Pharmaceutical Sciences · doi:10.1016/j.ejps.2019.04.011 · Cited by 388 · see citing works
TNF-α Coordinates Hematopoietic Stem Cell Survival and Myeloid Regeneration
Yamashita, M., & Passegué, E. (2019) · Cell Stem Cell · doi:10.1016/j.stem.2019.05.019 · Cited by 387 · see citing works
Inflamm-aging of hematopoiesis, hematopoietic stem cells, and the bone marrow microenvironment
Kovtonyuk, L. V., Fritsch, K., Feng, X., Manz, M. G., & Takizawa, H. (2016) · Frontiers in Immunology · doi:10.3389/fimmu.2016.00502 · Cited by 371 · see citing works
Jiang, G., Tan, Y., Wang, H., Peng, L., Chen, H., Meng, X., Li, L.-L., Liu, Y., Li, W., & Shan, H. (2019) · Molecular Cancer · doi:10.1186/s12943-019-0944-z · Cited by 365 · see citing works
Autophagy, cancer stem cells and drug resistance
Smith, A. G., & Macleod, K. F. (2018) · The Journal of Pathology · doi:10.1002/path.5222 · Cited by 364 · see citing works
Autophagy in the renewal, differentiation and homeostasis of immune cells
Clarke, A. J., & Simon, A. K. (2019) · Nature Reviews Immunology · doi:10.1038/s41577-018-0095-2 · Cited by 361 · see citing works
Autophagy is a critical regulator of memory CD8+ T cell formation
Puleston, D. J., Zhang, H., Powell, T. J., Lipina, E., Sims, S., Panse, I., Watson, A. S., Cerundolo, V., Townsend, A. R., Klenerman, P., et al. (2014) · eLife · doi:10.7554/elife.03706 · Cited by 360 · see citing works
Beige adipocyte maintenance is regulated by autophagy-induced mitochondrial clearance
Altshuler-Keylin, S., Shinoda, K., Hasegawa, Y., Ikeda, K., Hong, H., Kang, Q., Yang, Y., Perera, R. M., Debnath, J., & Kajimura, S. (2016) · Cell Metabolism · doi:10.1016/j.cmet.2016.08.002 · Cited by 349 · see citing works
Self-citationMeiners, S., Eickelberg, O., & Königshoff, M. (2015) · European Respiratory Journal · doi:10.1183/09031936.00186914 · Cited by 340 · see citing works
Accelerated ageing of the lung in COPD: new concepts
Mercado, N., Ito, K., & Barnes, P. J. (2015) · Thorax · doi:10.1136/thoraxjnl-2014-206084 · Cited by 340 · see citing works
Ludin, A., Gur‐Cohen, S., Golan, K., Kaufmann, K. B., Itkin, T., Medaglia, C., Lu, X., Ledergor, G., Kollet, Ó., & Lapidot, T. (2014) · Antioxidants and Redox Signaling · doi:10.1089/ars.2014.5941 · Cited by 333 · see citing works
Metabolic regulation of stem cell function in tissue homeostasis and organismal ageing
Chandel, N. S., Jasper, H., Ho, T. T., & Passegué, E. (2016) · Nature Cell Biology · doi:10.1038/ncb3385 · Cited by 326 · see citing works
Ali, T., Rahman, S. U., Hao, Q., Li, W., Liu, Z., Shah, F. A., Murtaza, I., Zhang, Z., Yang, X., Liu, G., et al. (2020) · Journal of Pineal Research · doi:10.1111/jpi.12667 · Cited by 324 · see citing works
Pietras, E. M., Lakshminarasimhan, R., Techner, J.-M., Fong, S., Flach, J., Binnewies, M., & Passegué, E. (2014) · Journal of Experimental Medicine · doi:10.1084/jem.20131043 · Cited by 323 · see citing works
Self-citationFeng, Y., Yao, Z., & Klionsky, D. J. (2015) · Trends in Cell Biology · doi:10.1016/j.tcb.2015.02.002 · Cited by 319 · see citing works
The metabolic programming of stem cellsPreprint
Shyh‐Chang, N., & Ng, H. (2017) · Genes & Development · doi:10.1101/gad.293167.116 · Cited by 317 · see citing works
Ito, K., Turcotte, R., Cui, J., Zimmerman, S. E., Pinho, S., Mizoguchi, T., Arai, F., Runnels, J. M., Alt, C., Teruya‐Feldstein, J., et al. (2016) · Science · doi:10.1126/science.aaf5530 · Cited by 311 · see citing works
Autophagy and the hallmarks of aging
Kaushik, S., Tasset, I., Arias, E., Pampliega, O., Wong, E., Martinez-Vicente, M., & Cuervo, A. M. (2021) · Ageing Research Reviews · doi:10.1016/j.arr.2021.101468 · Cited by 285 · see citing works
Guan, J., Simon, A. K., Prescott, M., Menéndez, J. A., Liu, F., Wang, F., Wang, C., Wolvetang, E. J., Vázquez‐Martín, A., & Zhang, J. (2013) · Autophagy · doi:10.4161/auto.24132 · Cited by 285 · see citing works
The role of mitochondria in stem cell fate and aging
Zhang, H., Menzies, K. J., & Auwerx, J. H. (2018) · Development · doi:10.1242/dev.143420 · Cited by 285 · see citing works
Chaperone-mediated autophagy sustains haematopoietic stem-cell function
Dong, S., Wang, Q., Kao, Y.-R., Diaz, A., Tasset, I., Kaushik, S., Thiruthuvanathan, V., Zintiridou, A., Nieves, E., Dzieciatkowska, M., et al. (2021) · Nature · doi:10.1038/s41586-020-03129-z · Cited by 275 · see citing works
Saito, Y., Chapple, R., Lin, A., Kitano, A., & Nakada, D. (2015) · Cell Stem Cell · doi:10.1016/j.stem.2015.08.019 · Cited by 245 · see citing works
Specification of haematopoietic stem cell fate via modulation of mitochondrial activity
Vannini, N., Girotra, M., Naveiras, O., Nikitin, G. F., Campos, V., Giger, S., Roch, A., Auwerx, J. H., & Lütolf, M. P. (2016) · Nature Communications · doi:10.1038/ncomms13125 · Cited by 272 · see citing works
Regulation of Stem Cell Aging by Metabolism and Epigenetics
Ren, R., Ocampo, A., Liu, G., & Belmonte, J. C. I. (2017) · Cell Metabolism · doi:10.1016/j.cmet.2017.07.019 · Cited by 269 · see citing works
Lee, J.-W., Nam, H., Kim, L. E., Jeon, Y., Min, H., Ha, S., Lee, Y., Kim, S.-Y., Lee, S. J., Kim, E.-K., et al. (2019) · Autophagy · doi:10.1080/15548627.2018.1556946 · Cited by 260 · see citing works
Mitophagy in tumorigenesis and metastasis
Poole, L. P., & Macleod, K. F. (2021) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-021-03774-1 · Cited by 250 · see citing works
Restraining Lysosomal Activity Preserves Hematopoietic Stem Cell Quiescence and Potency
Liang, R. H.-S., Arif, T., Kalmykova, S., Kasianov, A. S., Miao, L., Menon, V., Qiu, J., Bernitz, J. M., Moore, K. A., Lin, F., et al. (2020) · Cell stem cell · doi:10.1016/j.stem.2020.01.013 · Cited by 248 · see citing works
The multifaceted role of autophagy in cancer
Russell, R. C., & Guan, K. (2022) · The EMBO Journal · doi:10.15252/embj.2021110031 · Cited by 229 · see citing works
Cai, X., Gao, L., Teng, L., Ge, J., Oo, Z. M., Kumar, A. R., Gilliland, D. G., Mason, P. J., Tan, K., & Speck, N. A. (2015) · Cell stem cell · doi:10.1016/j.stem.2015.06.002 · Cited by 228 · see citing works
Lysosome: regulator of lipid degradation pathways
Settembre, C., & Ballabio, A. (2014) · Trends in Cell Biology · doi:10.1016/j.tcb.2014.06.006 · Cited by 225 · see citing works
Functions of autophagy in the tumor microenvironment and cancer metastasis
Mowers, E. E., Sharifi, M. N., & Macleod, K. F. (2018) · FEBS Journal · doi:10.1111/febs.14388 · Cited by 221 · see citing works
Vannini, N., Campos, V., Girotra, M., Trachsel, V., Rojas-Sutterlin, S., Tratwal, J., Ragusa, S., Stefanidis, E., Ryu, D., Rainer, P. Y., et al. (2019) · Cell Stem Cell · doi:10.1016/j.stem.2019.02.012 · Cited by 218 · see citing works
Beclin1-mediated interplay between autophagy and apoptosis: New understanding
Prerna, K., & Dubey, V. K. (2022) · International Journal of Biological Macromolecules · doi:10.1016/j.ijbiomac.2022.02.005 · Cited by 209 · see citing works
Autophagy Inhibition Mediates Apoptosis Sensitization in Cancer Therapy by Relieving FOXO3a Turnover
Fitzwalter, B. E., Towers, C. G., Sullivan, K. D., Andrysík, Z., Hoh, M., Ludwig, M. P., O’Prey, J., Ryan, K. M., Espinosa, J. M., Morgan, M. J., et al. (2018) · Developmental Cell · doi:10.1016/j.devcel.2018.02.014 · Cited by 208 · see citing works
Basic Biology of Skeletal Aging: Role of Stress Response Pathways
Almeida, M., & O’Brien, C. A. (2013) · The Journals of Gerontology Series A · doi:10.1093/gerona/glt079 · Cited by 202 · see citing works
Autophagy in stem cells: repair, remodelling and metabolic reprogramming
Boya, P., Codogno, P., & Rodriguez-Muela, N. (2018) · Development · doi:10.1242/dev.146506 · Cited by 197 · see citing works
Understanding intrinsic hematopoietic stem cell aging
Mejía-Ramírez, E., & Florian, M. C. (2019) · Haematologica · doi:10.3324/haematol.2018.211342 · Cited by 191 · see citing works
FoxO1-mediated autophagy is required for NK cell development and innate immunity
Wang, S., Xia, P., Huang, G., Zhu, P., Liu, J., Ye, B., Du, Y., & Fan, Z. (2016) · Nature Communications · doi:10.1038/ncomms11023 · Cited by 188 · see citing works
Zhang, M., Zhu, X., Zhang, Y., Cai, Y., Chen, J., Sivaprakasam, S., Gurav, A., Pi, W., Makala, L., Wu, J., et al. (2015) · Cell Death and Differentiation · doi:10.1038/cdd.2015.51 · Cited by 186 · see citing works
Liu, Y., Gong, W., Yang, Z., Zhou, X., Gong, C., Zhang, T. R., Wei, X., Ma, D., Ye, F., & Gao, Q. (2017) · APOPTOSIS · doi:10.1007/s10495-016-1334-2 · Cited by 186 · see citing works
Asymmetric lysosome inheritance predicts activation of haematopoietic stem cells
Loeffler, D., Wehling, A., Schneiter, F., Zhang, Y., Müller‐Bötticher, N., Hoppe, P. S., Hilsenbeck, O., Kokkaliaris, K. D., Endele, M., & Schroeder, T. (2019) · Nature · doi:10.1038/s41586-019-1531-6 · Cited by 183 · see citing works
Dysregulated haematopoietic stem cell behaviour in myeloid leukaemogenesis
Yamashita, M., Dellorusso, P. V., Olson, O. C., & Passegue, E. A. (2020) · Nature reviews. Cancer · doi:10.1038/s41568-020-0260-3 · Cited by 182 · see citing works
mTORC2: The other mTOR in autophagy regulation
Ballesteros‐Álvarez, J., & Andersen, J. K. (2021) · Aging Cell · doi:10.1111/acel.13431 · Cited by 182 · see citing works
Aging-Induced Stem Cell Mutations as Drivers for Disease and Cancer
Adams, P. D., Jasper, H., & Rudolph, K. L. (2015) · Cell stem cell · doi:10.1016/j.stem.2015.05.002 · Cited by 179 · see citing works
Autophagy-mediated regulation of macrophages and its applications for cancer
Chen, P., Cescon, M., & Bonaldo, P. (2013) · Autophagy · doi:10.4161/auto.26927 · Cited by 179 · see citing works
Epigenetic Control of Stem Cell Potential during Homeostasis, Aging, and Disease
Beerman, I., & Rossi, D. J. (2015) · Cell stem cell · doi:10.1016/j.stem.2015.05.009 · Cited by 178 · see citing works
Autophagy and Stem Cells: Self-Eating for Self-Renewal
Chang, N. C. (2020) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2020.00138 · Cited by 174 · see citing works
Autophagy limits proliferation and glycolytic metabolism in acute myeloid leukemia
Watson, A., Riffelmacher, T., Stranks, A. J., Williams, O., de Boer, J., Cain, K., MacFarlane, M., McGouran, J. F., Kessler, B. M., Khandwala, S., et al. (2015) · Cell Death Discovery · doi:10.1038/cddiscovery.2015.8 · Cited by 169 · see citing works
Autocrine VEGF maintains endothelial survival through regulation of metabolism and autophagy
Domigan, C. K., Warren, C. M., Antanesian, V., Happel, K., Ziyad, S., Lee, S., Krall, A. S., Duan, L., Torres‐Collado, A. X., Castellani, L. W., et al. (2015) · Journal of Cell Science · doi:10.1242/jcs.163774 · Cited by 168 · see citing works
Luo, H., Mu, W.-C., Karki, R., Chiang, H.-H., Mohrin, M., Shin, J. J., Ohkubo, R., Ito, K., Kanneganti, T.-D., & Chen, D. (2019) · Cell Reports · doi:10.1016/j.celrep.2018.12.101 · Cited by 161 · see citing works
HSC Niche Biology and HSC Expansion Ex Vivo
Kumar, S., & Geiger, H. (2017) · Trends in Molecular Medicine · doi:10.1016/j.molmed.2017.07.003 · Cited by 159 · see citing works
Sonigo, C., Beau, I., Grynberg, M., & Binart, N. (2018) · The FASEB Journal · doi:10.1096/fj.201801089r · Cited by 159 · see citing works
Dietary and Metabolic Control of Stem Cell Function in Physiology and Cancer
Mihaylova, M. M., Sabatini, D. M., & Yilmaz, Ö. H. (2014) · Cell stem cell · doi:10.1016/j.stem.2014.02.008 · Cited by 153 · see citing works
The role of autophagy induced by tumor microenvironment in different cells and stages of cancer
Yang, X. F., Yu, D., Yan, F., Jing, Y., Han, Z., Sun, K., Liang, L., Hou, J., & Wei, L. (2015) · Cell & Bioscience · doi:10.1186/s13578-015-0005-2 · Cited by 153 · see citing works
Autophagy, a key mechanism of oncogenesis and resistance in leukemia
Auberger, P., & Puissant, A. (2016) · Blood · doi:10.1182/blood-2016-07-692707 · Cited by 153 · see citing works
Russo, M., & Russo, G. L. (2018) · Biochemical Pharmacology · doi:10.1016/j.bcp.2018.02.007 · Cited by 147 · see citing works
Immunologic manifestations of autophagy
Deretic, V. P., Kimura, T., Timmins, G. S., Moseley, P. L., Chauhan, S., & Mandell, M. A. (2015) · Journal of Clinical Investigation · doi:10.1172/jci73945 · Cited by 146 · see citing works
Revuelta, M., & Matheu, A. (2017) · Aging Cell · doi:10.1111/acel.12655 · Cited by 146 · see citing works
Ido, Y., Duranton, A., Lan, F., Weikel, K., Breton, L., & Ruderman, N. B. (2015) · PLoS ONE · doi:10.1371/journal.pone.0115341 · Cited by 141 · see citing works
Mitochondrial metabolism in hematopoietic stem cells requires functional FOXO3
Rimmelé, P., Liang, R. H.-S., Bigarella, C. L., Kocabaş, F., Xie, J., Serasinghe, M. N., Chipuk, J. E., Sadek, H. A., Zhang, C. C., & Ghaffari, S. (2015) · EMBO Reports · doi:10.15252/embr.201439704 · Cited by 141 · see citing works
β-Hydroxybutyrate: A signaling metabolite in starvation response?
Rojas‐Morales, P., Tapia, E., & Pedraza‐Chaverrí, J. (2016) · Cellular Signalling · doi:10.1016/j.cellsig.2016.04.005 · Cited by 141 · see citing works
Nutrient-sensing pathways and metabolic regulation in stem cells
Ochocki, J. D., & Simon, M. C. (2013) · Journal of Cell Biology · doi:10.1083/jcb.201303110 · Cited by 140 · see citing works
Proteostasis and aging of stem cells
Vı́lchez, D., Simic, M., & Dillin, A. G. (2013) · Trends in Cell Biology · doi:10.1016/j.tcb.2013.09.002 · Cited by 140 · see citing works
Autophagy and cancer: Modulation of cell death pathways and cancer cell adaptations
Towers, C. G., Wodetzki, D., & Thorburn, A. M. (2019) · The Journal of Cell Biology · doi:10.1083/jcb.201909033 · Cited by 139 · see citing works
The Role of Osteocytes in Age-Related Bone Loss
Jilka, R. L., & O’Brien, C. A. (2016) · Current Osteoporosis Reports · doi:10.1007/s11914-016-0297-0 · Cited by 136 · see citing works
Yamamoto, T., Takabatake, Y., Kimura, T., Takahashi, A., Namba, T., Matsuda, J., Minami, S., Kaimori, J.-Y., Matsui, I., Kitamura, H., et al. (2016) · Autophagy · doi:10.1080/15548627.2016.1159376 · Cited by 135 · see citing works
Germline duplication of ATG2B and GSKIP predisposes to familial myeloid malignancies
Saliba, J., Saint‐Martin, C., Stefano, A. D., Lenglet, G., Marty, C., Keren, B., Pasquier, F., Della-Valle, V., Secardin, L., Leroy, G., et al. (2015) · Nature Genetics · doi:10.1038/ng.3380 · Cited by 135 · see citing works
Oxidative Stress in Stem Cell Aging
Chen, F., Liu, Y., Wong, N.-K., Xiao, J., & So, K. (2017) · Cell Transplantation · doi:10.1177/0963689717735407 · Cited by 134 · see citing works
Tang, D., Tao, S., Chen, Z., Koliesnik, I. O., Calmes, P. G., Hoerr, V., Han, B., Gebert, N., Zörnig, M., Löffler, B., et al. (2016) · Journal of Experimental Medicine · doi:10.1084/jem.20151100 · Cited by 133 · see citing works
Integrated stress response activity marks stem cells in normal hematopoiesis and leukemia
van Galen, P., Mbong, N., Kreso, A., Schoof, E. M., Wagenblast, E., Ng, S. W. K., Krivdova, G., Jin, L., Nakauchi, H., & Dick, J. E. (2018) · Cell Reports · doi:10.1016/j.celrep.2018.10.021 · Cited by 131 · see citing works
Targeting quiescent leukemic stem cells using second generation autophagy inhibitors
Baquero, P., Dawson, A., Mukhopadhyay, A., Kuntz, E. M., Mitchell, R., Olivares, O., Ianniciello, A., Scott, M. T., Dunn, K. M., Nicastri, M. C., et al. (2018) · Leukemia · doi:10.1038/s41375-018-0252-4 · Cited by 130 · see citing works
Fujimaki, K., Li, R., Chen, H., Croce, K. D., Zhang, H. H., Xing, J., Bai, F., & Yao, G. (2019) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1915905116 · Cited by 130 · see citing works
New Function of Type I IFN: Induction of Autophagy
Schmeisser, H., Bekisz, J., & Zoon, K. C. (2014) · Journal of Interferon & Cytokine Research · doi:10.1089/jir.2013.0128 · Cited by 129 · see citing works
Autophagy in Neutrophils: From Granulopoiesis to Neutrophil Extracellular Traps
Skendros, P., Mitroulis, I., & Ritis, K. (2018) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2018.00109 · Cited by 129 · see citing works
Surviving change: the metabolic journey of hematopoietic stem cells
Kohli, L., & Passegue, E. A. (2014) · Trends in Cell Biology · doi:10.1016/j.tcb.2014.04.001 · Cited by 127 · see citing works
FOXO family in regulating cancer and metabolism
Ma, J., Matkar, S. S., He, X., & Hua, X. (2018) · Seminars in Cancer Biology · doi:10.1016/j.semcancer.2018.01.018 · Cited by 124 · see citing works
Proteostatic and Metabolic Control of Stemness
García‐Prat, L., Sousa‐Victor, P., & Muñoz‐Cánoves, P. (2017) · Cell stem cell · doi:10.1016/j.stem.2017.04.011 · Cited by 123 · see citing works
KCNQ1OT1 promotes autophagy by regulating miR‐200a/FOXO3/ATG7 pathway in cerebral ischemic stroke
Yu, S., Yu, M., He, X., Wen, L., Bu, Z., & Feng, J. (2019) · Aging Cell · doi:10.1111/acel.12940 · Cited by 123 · see citing works
- Authors
- Warr, M. R., Binnewies, M., Flach, J., Reynaud, D., Garg, T., Malhotra, R., Debnath, J., & Passegué, E.
- Affiliations
- University of California, San Francisco (US)
- Venue
- Nature
- Published
- 2013-02
- Volume
- 494
- Issue
- 7437
- Pages
- 323-327
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- PMC
- PMC3579002
- OpenAlex
- W2055807959
- Cited by
- 625
- References
- 40
- Citations by year
- 2026: 28 · 2025: 28 · 2024: 36 · 2023: 39 · 2022: 42 · 2021: 48 · 2020: 46 · 2019: 54 · 2018: 57 · 2017: 60 · 2016: 55 · 2015: 54 · 2014: 47 · 2013: 31
- FWCI
- 44.99
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- eScholarship (California Digital Library) (submittedVersion, cc-by-nc-nd)
- RePEc: Research Papers in Economics (submittedVersion)
- eScholarship (California Digital Library) (submittedVersion)
- Funders
- Tokyo Medical and Dental University
- National Institutes of Health
- University of California, San Francisco
- National Heart, Lung, and Blood Institute (HL092471, R01HL111266, R01HL092471)
- National Cancer Institute (R01CA184014, CA126792, R01CA126792)
- Topics
- Health Sciences › Medicine › Epidemiology › Autophagy in Disease and Therapy
- Health Sciences › Medicine › Hematology › Hematopoietic Stem Cell Transplantation
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › FOXO transcription factor regulation
- Keywords
- FOXO3, autophagy, hematopoietic stem cells, metabolic stress, caloric restriction, cytokine withdrawal, aging, energy crisis, HSC self-renewal
- MeSH terms
- Forkhead Box Protein O3, Aging, Animals, Autophagy, Cell Survival, Energy Metabolism, Food Deprivation, Gene Expression Regulation, Hematopoietic Stem Cells, Homeostasis, Mice, Inbred C57BL, Stress, Physiological, Cytokines, Cellular Senescence, Apoptosis, Caloric Restriction, Mice, Forkhead Transcription Factors
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review